NO08G01960, NO08G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01960 vs. NCBI_GenBank
Match: OWZ12914.1 (Cobalamin synthesis protein [Phytophthora megakarya]) HSP 1 Score: 248.8 bits (634), Expect = 4.000e-62 Identity = 156/426 (36.62%), Postives = 223/426 (52.35%), Query Frame = 0 Query: 143 IIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLSK-LEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVC-GAEHVHGGNEEGRRDDE-----VRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAG 562 +IPVTI+SGFLGAGKTTLL +IL+ HGKRIAVIENEFG+ +G+ES +AKDGA G ++GF+EL+NGC+CCSV+ DL+ TLE L++R+ +FDY+L+ET+G+ADPG VAS WVD+ELE ++ LDGIVT+VDA + HL +TQ EA Q+ ADRILLNK DLV++ + + +E + +NGMA I+ T S++DLD +L + + + + V + G EHVH + + D T + + + +++WL ELLW + ++R+KG +AVAG ILQAVHE FE+ S + + + G+ ++V IG L + L G Sbjct: 17 LIPVTILSGFLGAGKTTLLKFILSADHGKRIAVIENEFGEEVGVESLVAKDGA-GDVMDGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDDELEGRIFLDGIVTLVDAPRLDFHL------------------------------------------SHPDTQ--------------------REAAAQLAYADRILLNKGDLVSDTEQRREIEKKTTQINGMASIRWTERSRVDLDDILNIKSFTTSRAEQVEKELRTLHEGEEHVHENCSDEQHDHTHTGGMQTTCVRIHDGPLDQDKLERWLGELLWEQE--EVDTETESGSDAAKRQKLFRIKGVVAVAGESNKFILQAVHELFEVYASDEQWANDEL-----DSKDGRVTQVVFIGLHLRKSELETG 372
BLAST of NO08G01960 vs. NCBI_GenBank
Match: ETL45442.1 (hypothetical protein L916_04478 [Phytophthora parasitica] >ETP21999.1 hypothetical protein F441_04614 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 248.1 bits (632), Expect = 6.800e-62 Identity = 155/438 (35.39%), Postives = 227/438 (51.83%), Query Frame = 0 Query: 143 IIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLS-KLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVR-----------TVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAVS 569 +IPVTI+SGFLG+GKTTLL +IL+ HGKRIAVIENEFG+ +G+ES +AKDGA G ++GF+EL+NGC+CCSV+ DL+ TLE L++R+ +FDY+++ET+G+ADPG VAS WVD+ELE ++ LDGIVT+VD+ + HL +TQ EA Q+ ADRILLNK DLV + + ++E + +NGMA ++ T S+++LD +L + + + + V LN AE G++ +DE T + + E +++WL ELLW D ++R+KG +A+AG ILQAVHE FE+ S+ E + + + ++V IG L +G L G + V+ Sbjct: 23 MIPVTILSGFLGSGKTTLLRFILSASHGKRIAVIENEFGEEIGVESLVAKDGAGGDVMDGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDSPRLNFHL------------------------------------------NHPDTQ--------------------REAAAQLAYADRILLNKGDLVPDKEQRLEIEQTVTQVNGMASVRWTERSRVNLDDILNIKSFTTSRAEQVEKE-LNTLLAEGKEEGHDHDNCNDESHDHATHTGGMQTTCVRIRDGPLDQEKLERWLGELLWEQD-EDVDVEIKPGSEAATRQKLFRVKGVVAIAGETNKFILQAVHELFEVYASEERWTEDELNS-----KDSRVTQVVFIGLHLRKGELEVGLRSCVVT 391
BLAST of NO08G01960 vs. NCBI_GenBank
Match: XP_009837234.1 (hypothetical protein H257_11868 [Aphanomyces astaci] >ETV73359.1 hypothetical protein H257_11868 [Aphanomyces astaci]) HSP 1 Score: 247.3 bits (630), Expect = 1.200e-61 Identity = 154/419 (36.75%), Postives = 217/419 (51.79%), Query Frame = 0 Query: 144 IPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEA-DLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAG 562 +PVTI++GFLGAGKTTLLNYILTQ HGKRIAVIENEFG+ +G+ES IA+DGA+G + F+EL+NGCICCSV+ DL++TLE L+ R+ +FDYVL+ET+G+ADPG +AS WVD ELE ++ LDGIVT+VDAK+I HL +TN E QI ADRIL+NK DL+ +A D +LE +L +N +A T S IDLD +L ++ + + D ++ +N EH + + V + + + V ++ W+ LLW D I+R+KG +A+ + ILQ V + F++ PS+ + + + +LV IG GLD L+ G Sbjct: 9 VPVTILTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGAEGDAFADFYELSNGCICCSVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDSELEGRITLDGIVTLVDAKNIAWHLEQ------------------------------------------------------------QTN----EVLSQIAYADRILVNKADLMPDADDRRRLEGQLNAMNALAPCIWTERSNIDLDAILNINAFSS----DRAIAVMN----EH-NATEKPFTHTANVTSTCVSRVLPLSVRGLEYWIGSLLWED--------------ATDDRRIFRIKGVVAIENDDRKFILQGVQDLFDVSPSEKWLPDEP-----------RTTKLVFIGLGLDSNALQQG 329
BLAST of NO08G01960 vs. NCBI_GenBank
Match: XP_009522830.1 (hypothetical protein PHYSODRAFT_246028 [Phytophthora sojae] >EGZ20113.1 hypothetical protein PHYSODRAFT_246028 [Phytophthora sojae]) HSP 1 Score: 246.5 bits (628), Expect = 2.000e-61 Identity = 159/436 (36.47%), Postives = 223/436 (51.15%), Query Frame = 0 Query: 143 IIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGA--DGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLSK-LEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDV--SLPFLNVCGAEHVHGGNEEGRRDDEVR------TVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAV 568 +IPVTI+SGFLGAGKTTLL +IL HGKRIAVIENEFG +G+ES +AKDGA D ++GF+EL+NGC+CCSV+SDL+ TLE L++R+ +FDY+L+ET+G+ADPG VAS WVD+ELE ++ LDGIVT+VDA + HL + +TQ EA Q+ ADRILLNK DLV + D + +E + +NG+A + T S++DLD +L + + + + V L L G EH H + D T + + + +++WL ELLW + ++R+KG +AV+G ILQAVHE FE+ S+ E + G+ ++V IG L + L AG + V Sbjct: 17 LIPVTILSGFLGAGKTTLLKFILQAQHGKRIAVIENEFGDEIGVESLVAKDGAGDDAQVMDGFYELSNGCVCCSVRSDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDDELEGRIFLDGIVTLVDAPRLDFHL------------------------------------------DHPDTQ--------------------REAAAQLAYADRILLNKGDLVQDKDRRREIEQRVSQVNGVASVHWTERSRVDLDDILNIKSFTTSRAEQVEKELHSLLYAGEEHDHEKCNDEHHDHTTHTGGMQTTCVRIRDGPLDHDKLERWLGELLWEQE------DDEIKDAAAKHQKLFRVKGVVAVSGEPNKFILQAVHELFEVYASEERWTEDELSV-----MEGRVTQVVFIGLHLRKNELEAGLRSCVV 379
BLAST of NO08G01960 vs. NCBI_GenBank
Match: GAY04473.1 (Hypothetical protein PINS_012284 [Pythium insidiosum]) HSP 1 Score: 245.0 bits (624), Expect = 5.800e-61 Identity = 169/460 (36.74%), Postives = 233/460 (50.65%), Query Frame = 0 Query: 116 QAQEDDGAIQQL--------SSSSM-----GSSTAIGISKIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVT-EADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAG 562 Q EDD +I QL S+S S A ++ ++PVTIISGFLGAGKTTLLNYILT HGKRIAVIENEFG+ +G+E+ IAKDGA+G E F+EL+NGCICCSV+ LL TLE L++R+ +FDY+LIET+G+A+PG VAS WVD ELE ++ LDGIVT+VDA I L + +TQ EA Q+ ADR+LLNK DL+T +A+ +E +R +NG+A + T+ ++IDLD +L + + ++ + VH G + T V G + + +++WL +LLW X +R+KG LA+AG ++LQAVHE FE+ +Q + +K R+V IG +D L AG Sbjct: 2 QTMEDDDSIPQLLEAIPPLVSASERVQPPPSPSHASPVASLVPVTIISGFLGAGKTTLLNYILTANHGKRIAVIENEFGEEIGVENLIAKDGANGQVFEDFYELSNGCICCSVRDXLLNTLERLLERRDRFDYILIETTGMANPGKVASMFWVDAELEGRIFLDGIVTLVDAPRIASLL------------------------------------------DHRDTQ--------------------LEAASQLAYADRVLLNKQDLLTHDAERCAVETRVREINGVATMTWTHRAQIDLDHILNIQAFTTQRAQERREE------TAVVHTGGVQ-------TTCIXVSGGWLDQDKLERWLGQLLWEQ--------GDETEKQXGRAKFFRVKGVLAIAGETNKYVLQAVHELFEVYATQEPWTDSEK--------TAITSRVVFIGLHIDRAALHAG 370
BLAST of NO08G01960 vs. NCBI_GenBank
Match: PTQ40152.1 (hypothetical protein MARPO_0041s0052 [Marchantia polymorpha]) HSP 1 Score: 243.4 bits (620), Expect = 1.700e-60 Identity = 171/479 (35.70%), Postives = 246/479 (51.36%), Query Frame = 0 Query: 95 ALPLPSSSFSPNKLPL---SALPAQAQ--ED--DGAIQQLSSSSMGSSTAIGIS-------KIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTE----ADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDE 556 A+PL SS S ++P ALP + + ED DG + ST I+ + + +T+I+G+LG+GKTTL+NYIL + HG+RIAVI NEFG+ LGIE A+ +GA GS +E + +L NGC+CCSVK + +E L++R+ +FDY+L+ET+GLA+PGPVAS LWVD++LE+ +RLD IVTVVDA + R L HEP S T EAY QI AD ++LNKTDLV + + L K+E E++ +NGM +I + ++DLD VL YG + D+ L+ ++VH D V+T+++ V +E V +WL LLW IYRMKG L + GS +H+LQAV + +E+ P++ EGDK + +V+IGK L++ Sbjct: 8 AVPLSFSSPSSPEIPALVPVALPDELEFPEDKFDGEEDSAKAGPNAPSTDKSITLLDNEEQEAVGITMITGYLGSGKTTLVNYILKEQHGRRIAVILNEFGEELGIERAMINEGAQGSLVEEWVDLPNGCVCCSVKHSFVQAIEQLMERRERFDYILLETTGLANPGPVASILWVDDQLEASVRLDSIVTVVDAGNFLRQL------------------------------------------------HEPREAGSVT-----------EAYLQIAYADVVILNKTDLVKDESGHSTLEKIEREIKSINGMVKIVHSERCRVDLDDVLDCKAYGIKHSVDLE-ALLSKPVDDNVH--------DSAVKTISFKLDGPVDLEKVNEWLGNLLWEPS---------------DKMEIYRMKGVLDIHGSGEMHMLQAVRDLYEIVPTRKW-REGDK----------RINHVVLIGKNLNK 392
BLAST of NO08G01960 vs. NCBI_GenBank
Match: XP_008866004.1 (hypothetical protein H310_03788 [Aphanomyces invadans] >ETW04566.1 hypothetical protein H310_03788 [Aphanomyces invadans]) HSP 1 Score: 241.9 bits (616), Expect = 4.900e-60 Identity = 154/424 (36.32%), Postives = 213/424 (50.24%), Query Frame = 0 Query: 144 IPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTD-LVTEADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATA 567 +PVTI++GFLGAGKTTLLNYILTQ HGKRIAVIENEFG+ +G+ES IA+DGA+G + F+EL+NGCICCSV+ DL++TLE L+ R+ +FDYVL+ET+G+ADPG +AS WVD ELE ++ LDGIVT+VDAK+I HL KTN E QI ADRIL+NK D + + D +LE +L N +A T S +DLD +L + + D ++ LN E + V + + + V A++ W+ LLW + I+R+KG ++VAG +ILQ V + F++ S+ + + +LV IG GL+ L+ G A A Sbjct: 9 VPVTILTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGAEGEAFADFYELSNGCICCSVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASMFWVDNELEGRITLDGIVTLVDAKNIAWHLEQ------------------------------------------------------------KTN----EVMSQIAYADRILINKADQMPQDEDRRRLEQQLGVTNALAPCYWTERSHVDLDAILNIQAFSG----DRAMAVLNEQSVEKAF------PHTNSVSSTCIRRELPLTVRALEHWIGTLLWEPE--------------TDGTRIFRIKGIVSVAGDACKYILQGVQDLFDVTASEAWAPDEP-----------RTTKLVFIGMGLNPQALQQGLDACA 333
BLAST of NO08G01960 vs. NCBI_GenBank
Match: OAE32183.1 (hypothetical protein AXG93_1793s1140 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 241.5 bits (615), Expect = 6.400e-60 Identity = 164/455 (36.04%), Postives = 236/455 (51.87%), Query Frame = 0 Query: 95 ALPLPSSSFSPNKLPL---SALPAQAQ--------EDDGAIQQLSSSSMGSSTAI---GISKIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTE----ADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDK 532 A+PL SS S ++P ALP + + E+D A ++ S S + + + +T+I+G+LG+GKTTL+NYIL + HG+RIAVI NEFG+ LGIE A+ +GA GS +E + +L NGC+CCSVK + +E L++R+ +FDY+L+ET+GLA+PGPVAS LWVD++LE+ +RLD IVTVVDA + R L HEP S T EAY QI AD ++LNKTDLV + + L K+E E++ +NGM +I + ++DLD VL YG + D+ L+ ++VH D V+T+++ V +E V +WL LLW IYRMKG L + GS +H+LQAV + +E+ P++ EGDK Sbjct: 7 AVPLSFSSPSSPEIPALVPVALPDELEFPEDKFDGEEDSAKAGPNAPSTDKSVTLLDNEEQEAVGITMITGYLGSGKTTLVNYILKEQHGRRIAVILNEFGEELGIERAMINEGAQGSLVEEWVDLPNGCVCCSVKHSFVQAIEQLMERRERFDYILLETTGLANPGPVASILWVDDQLEASVRLDSIVTVVDAGNFLRQL------------------------------------------------HEPREAGSVT-----------EAYLQIAYADVVILNKTDLVKDESGHSTLEKIEREIKSINGMVKIVHSERCRVDLDDVLDCKAYGIKHSVDLE-ALLSKPVDDNVH--------DSAVKTISFKLDGPVDLEKVNEWLGNLLWEPS---------------DKMEIYRMKGVLDIHGSGEMHMLQAVRDLYEIVPTRKW-REGDK 377
BLAST of NO08G01960 vs. NCBI_GenBank
Match: CBJ26290.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 241.1 bits (614), Expect = 8.300e-60 Identity = 179/539 (33.21%), Postives = 252/539 (46.75%), Query Frame = 0 Query: 104 SPNKLPLSALPAQAQEDDGAIQQLSSSSMGSSTAIGISKI-------------IPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSL-EGFFELANGCICCSVKSDLLATLEILVQRKSQFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLSKLEAELRGLNGMARIQRTNFSKIDLDFVLGLDCYG---ARKKDDVSLPFLNVCGA--------------------------EHVH--------------------------------GGNEEGRRDDEVRTVAWVEGVEVKVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAV 568 S + P +PAQ G + S+ ++ T+ ++++ +PVTI++GFLGAGKTTLLNYILTQ HG+RIAVIENE G + IES IAKDGADGS L + FEL NGCICC+VK DL+ TLE+L+QR+++FDYV+IET+GLA+PGPVAS W+DE LES LRLD IVT+VDAK+ R L+ P +GA EG Q +GK + EA Q+ ADR+L+NK+DLV+ L + +R +N +A ++ T S +DL ++L +C+ A D P + G HVH GG D V T A + + +++WL LLW +YR+KG ++V G + ++Q V + FE+ P++ + G + GE RR C++V IG+ L L G + V Sbjct: 3 SDDDCPPDLVPAQ-----GLLALSSNDTLPEDTSSDVAEVVVEVERPPTAPGAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIAKDGADGSVLADNLFELRNGCICCAVKDDLVTTLEMLLQRRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRV------------------------------PGEGAE-AGAEGEEQ------------SGKR--PKNEAAMQVAYADRVLINKSDLVSTETLDDVVGRVRTINALAEVRCTKRSAVDLAWILDTECFSSELAAALDPSLAPPRALLGTAQQNEGGRGSSAADRGIARTGSGPGDAHVHSHDVEPSGGHTESVHHHADGEACDECAAAEGPGGTACSVHDPSVTTCAVDLPGSLDLSRLERWLGGLLW--------------DPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVV---GSAWQEGEARR----CKVVFIGRLLSSRDLELGIRSCMV 470
BLAST of NO08G01960 vs. NCBI_GenBank
Match: CCI50484.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 240.7 bits (613), Expect = 1.100e-59 Identity = 164/466 (35.19%), Postives = 232/466 (49.79%), Query Frame = 0 Query: 132 MGSSTAIGISKIIPVTIISGFLGAGKTTLLNYILTQPHGKRIAVIENEFGQGLGIESAIAKDGADGSSLEGFFELANGCICCSVKSDLLATLEILVQRKS-QFDYVLIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKHIGRHLRXXXXXXXXXXXXXXXXXXXSTENGKQGQKWISPSQGAALKSEEGNTQHEPFLPPSSTTLTGKTNCHREEAYQQICVADRILLNKTDLVTEADLSK--LEAELRGLNGMARIQRTNFSKIDLDFVL-------------------GLDCYGARKKDDVSLPFLNVCGAEHVHGGNEEGRR------DDEVRTVAWVEGVEV-KVEAVKQWLAELLWRDDXXXXXXXXXXXXXXXXXXXIYRMKGTLAVAGSEVLHILQAVHETFELEPSQTLVGEGDKGEGGEERRGGKECRLVVIGKGLDEGHLRAGFLATAVS 569 M SSTA IPVTI+SGFLG+GKTTLLNYILT HGKRIAVIENEFG+ +GIES +AKDG DG L FFEL NGCICCSV+ DL+ TLE L++ KS +FDY+++ET+G+A+PG VAS WVD+ELE ++ LDGI+T+VDA +IG++L E +T R EA Q+ ADRILLNK DL+ + SK +E+ ++ +NG+A T +DL ++L L+C KDD+ + A H N E + +VRT+ ++ ++ +++WL ELLW D I+R+KG +A+ S +ILQ VH+ FE+ S+ + + + R+V IG GL + + + + ++ Sbjct: 1 MESSTAAS----IPVTILSGFLGSGKTTLLNYILTASHGKRIAVIENEFGEEIGIESLVAKDGLDGQYLPEFFELGNGCICCSVRDDLVNTLERLLETKSGKFDYIIVETTGMANPGKVASVFWVDDELEGRMYLDGIITIVDAHNIGKNL------------------------------------------ERDST--------------------RNEAASQLAYADRILLNKEDLLEGDNASKDNIESLIQSINGLAPFTWTKKGIVDLSYILEIQAFSMDRANQVELMLKDDLNCSKKGTKDDMESAINSDIHANCDHITNSEKDKVRGQIHSGKVRTICVTIPQKIFSIQKLERWLGELLWADQ---------KEGLCDANFEIFRIKGVVAIEKSPYKYILQGVHDLFEITSSKEVWSD-------------RISRIVFIGTGLQKTDIELSLIQSCLA 378 The following BLAST results are available for this feature:
BLAST of NO08G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01960 ID=NO08G01960|Name=NO08G01960|organism=Nannochloropsis oceanica|type=gene|length=4863bpback to top protein sequence of NO08G01960.1 >NO08G01960.1-protein ID=NO08G01960.1-protein|Name=NO08G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bpback to top Synonyms
Publications
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