NO08G01020, NO08G01020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01020 vs. NCBI_GenBank
Match: XP_021180459.1 (SUN domain-containing protein 1-like isoform X2 [Fundulus heteroclitus]) HSP 1 Score: 104.0 bits (258), Expect = 2.500e-18 Identity = 74/228 (32.46%), Postives = 107/228 (46.93%), Query Frame = 0 Query: 637 EGLMESRIGPLETSVRR------VKEDLRLLYADNTDMIDYAADASGGKIVPHLSSATYSSPHQLVATDVLHSFGANAHIGKRD--GVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSVTKYPG----TAPRSFRVLGRKSTHVAEQPLLLHSQKNFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHGVP 853 EG+ E+ + V + VKE LRL D T DYA ++ GG I+ S TY + L L FG + VI+P G+CW +G +G L +QL + + V++EH+ +++ PG +APR F V G + H LL N+ YD E L QTF + F ++ ++VL NWG+ +YTC+YR RVHG P Sbjct: 603 EGVREAHLDTAGNGVTKEEVHVMVKEALRLFSHDRTGQADYALESGGGSIISTRCSETYETKAAL-----LSLFGVPLWYFSQSPRAVIQPDVHP-GNCWAFRGSTGFLVIQLSMRILPTAVTMEHIPKTLA--PGRTLRSAPRDFSVYGLRDEHEESGKLL----GNYTYDEDGEDL-QTFPIS--------DENDEAFQIIEVQVLSNWGHPEYTCMYRFRVHGTP 809
BLAST of NO08G01020 vs. NCBI_GenBank
Match: XP_004349933.1 (hypothetical protein CAOG_01413 [Capsaspora owczarzaki ATCC 30864] >KJE90033.1 hypothetical protein CAOG_001413 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 103.2 bits (256), Expect = 4.200e-18 Identity = 69/200 (34.50%), Postives = 104/200 (52.00%), Query Frame = 0 Query: 654 VKEDLRLLYADNTDMIDYAADASGGKIVPHLSSATYSSPH-QLVATDVLHSFGANAHIGKRDGVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSVT-KYPGTAPRSFRVLGRKSTHVAEQPLLLHSQKNFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHGV 852 ++E + L AD ++D+A ++GG +V +SA++S P L V+ + +RD ++G+CW + G+SG LTV+L ++I+ SVEHVA+S++ +APR+FRV+ + E LL + YDI L Q FA+ F V LE+ N+G DYTCLYR RVHGV Sbjct: 839 IREAIALYDADKIGVVDFALASAGGSVVESCTSASFSVPRLALFGMPVMMQSTSPLLALQRD-------NSVGNCWAMSGQSGQLTVRLARSISITGFSVEHVAKSISLNTMKSAPRAFRVVALNAACDTEGTLL----GQYSYDIDGTPL-QQFAVQ--------SKPSRSFEYVRLEIASNYGEEDYTCLYRFRVHGV 1018
BLAST of NO08G01020 vs. NCBI_GenBank
Match: XP_009036172.1 (hypothetical protein AURANDRAFT_63651 [Aureococcus anophagefferens] >EGB09046.1 hypothetical protein AURANDRAFT_63651 [Aureococcus anophagefferens]) HSP 1 Score: 102.8 bits (255), Expect = 5.500e-18 Identity = 67/194 (34.54%), Postives = 99/194 (51.03%), Query Frame = 0 Query: 663 ADNTDMIDYAADASGGKIVPHLSSATYSSPHQLVATDVLHSFGANAHIGKRDGVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSV-----TKYPGTAPRSFRVLGRKSTHVAEQPLLLHSQKNFVYDIY-SERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHG 851 AD DYA A+G +V L+S Y+ P +V T V H+ G +A +G+ + I G C+ +G GSLTVQL + + + ++EH+ ++ +APR+F VLGR++ P+ L S F YD + + VQTFA F + TL+V N+G+ DYTC+YR RVHG Sbjct: 279 ADRVAKFDYALRATGASVVQGLTSEPYTPPGSVVPTKVWHALGRDAGVGRAEDAISQRV-GFGSCFAFEGSRGSLTVQLSSRVVPTAFTLEHIHGALCNPLHNANCSSAPRTFTVLGRRAGAPDATPVDLGS---FEYDAADAAKTVQTFA--------ALNDDRQAFDLATLQVTSNYGHPDYTCVYRFRVHG 460
BLAST of NO08G01020 vs. NCBI_GenBank
Match: XP_023670343.1 (SUN domain-containing protein 2 [Paramormyrops kingsleyae]) HSP 1 Score: 102.8 bits (255), Expect = 5.500e-18 Identity = 84/266 (31.58%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 589 LTEENALAIVRDEIEKAEERIKTLIMVMEKEGGGAATVPPGRPTFQEL--EGLMESRIGPLETSVRRVKEDLRLLYADNTDMIDYAADASGGKIVPHLSSATYSSPHQLVATDVLHSFGANAHIGKRDGVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVAR--SVTKYPGTAPRSFRVLGRKSTHVAEQPLLLHSQKNFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHG 851 L+E A ++R E++ A E ++ ++ E R + L EG+ + ++ V R L L AD+ M DYA ++SG ++ SATY H A L H VI+P G CW QG G L + L P++I+HV++EH+ + S T + +APR F V G T E+ LL F YD E +QTF L + + + +V L +L NWG+ +YTC+YR RVHG Sbjct: 386 LSEGRAAVVLRPELQGALESLERKLLQRLAEDREQEKQDAWRSVGEALQGEGVGAVTVQDVQQIVHRA---LSLYRADSIGMADYALESSGASVLNTRCSATY---HTRTACVSLFGVPLWYHSESPRTVIQPDLYP-GKCWAFQGSEGFLVIALSYPVHITHVTLEHLPKVLSPTGHIDSAPRDFSVYG--ITSETEEGTLL---GKFTYDQDGEP-IQTFKLPKPVEKV--------YRMVELRILTNWGHPEYTCVYRFRVHG 630
BLAST of NO08G01020 vs. NCBI_GenBank
Match: KDQ07779.1 (hypothetical protein BOTBODRAFT_647961 [Botryobasidium botryosum FD-172 SS1]) HSP 1 Score: 102.1 bits (253), Expect = 9.400e-18 Identity = 78/289 (26.99%), Postives = 126/289 (43.60%), Query Frame = 0 Query: 594 ALAIVRDEIEKAEERIKTLIMVMEKEGGGAATVPPGRPTFQELEG--LMESRIGPLETSVRRVKEDLRLL--YADNTDMIDYAADASGGKIVPHLSSATYSSPHQLVATDVLHSFGANAH-IGKRDGVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSVTKYPGTAPRSFRVLG----------RKSTHVA--------EQPLLLHSQK---------NFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHG 851 AL+ ++ +++AE K + + + A+ PP R + + +++S G T++ + D LL D M DYA G +++P L+S TY A + N +G+ ++G+CWP G +G + + L P I+HV+V+H ++ + TAPR FRV G + H A + P + +F YDI S QTF L L G+V ++ NWG++D+TCLYR+RVHG Sbjct: 704 ALSQLQTRLDQAEALAKEALDLSK-----ASAQPPSRSSHPHDDSPLVIQSVDGQDVTTLLKSLVDFSLLRHLKDGVAMPDYALYTGGARVIPDLTSPTYEPRSDSWARYLFDRMAGNGFALGRPPVTALVPDNSVGNCWPFAGAAGHIGIMLSQPAFITHVTVDHASKDIAYNIKTAPREFRVWGLVEGDQNIQKLAAYHAAIDGESRDDDDPAFFTNSPPSIRPVHLVSFSYDINSPSPTQTFPLPEKL-----QKLGLDIGIVVFQIQSNWGDSDFTCLYRVRVHG 982
BLAST of NO08G01020 vs. NCBI_GenBank
Match: KII85020.1 (hypothetical protein PLICRDRAFT_45126 [Plicaturopsis crispa FD-325 SS-3]) HSP 1 Score: 101.3 bits (251), Expect = 1.600e-17 Identity = 69/230 (30.00%), Postives = 97/230 (42.17%), Query Frame = 0 Query: 664 DNTDMIDYAADASGGKIVPHLSSATYS-SPHQLVATDVLHSFGANAHIGKRDGVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSVTKYPGTAPRSFRV-------------------LGRKSTHVAEQPLLLHSQ------------------KNFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHGVPVGQ 856 DN D+AA +SGG+I+P LSS TY PH L V G +G+ G CWP G G L V L P I ++++HVA+ V +APR V R+ E+ L + NF YDI++ + +QTF + + FG+V L V+ NWG +++TCLYR RVHG +G+ Sbjct: 208 DNIARPDFAAYSSGGQIIPSLSSPTYEMRPHGLRRQLVGLVTGHGYAVGRPPVTALNHETHNGHCWPFPGTQGQLGVVLTAPAYIEDITIDHVAKEVALDMRSAPREMEVWAMIDGADNIRKVKEWRADKARRRQEAEEEGLQFDGEDEPEYPRTLPKSPQYLRIANFTYDIHAPQNIQTFPVSPEI-----RALGVDFGIVVLRVMSNWGRDEFTCLYRFRVHGQMMGE 432
BLAST of NO08G01020 vs. NCBI_GenBank
Match: XP_020832968.1 (SUN domain-containing protein 2-like [Phascolarctos cinereus]) HSP 1 Score: 100.9 bits (250), Expect = 2.100e-17 Identity = 69/213 (32.39%), Postives = 104/213 (48.83%), Query Frame = 0 Query: 645 GPLETSVRR-VKEDLRLLYADNTDMIDYAADASGGKIVPHLSSATYSSPHQLVATDVLHSFGANA--HIGKRDGVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSVTKYPG--TAPRSFRVLGRKSTHVAEQPLLLHSQKNFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHGVP 853 G E VR V++ L+L D ++DYA ++SG I+ SS TY + T V+ FG H + +I+P G+CW +G G + V+L ++++ V++EHV R+++ +AP+ F +LG E L F YD E +QTF + +V L+VL NWG+ DYTC+YR RVHG P Sbjct: 173 GVTEEEVREIVRQALKLYSEDRIGLVDYALESSGASILSSHSSETYGT-----RTAVISLFGIPLWYHFQTQRAIIQPNVYP-GNCWAFRGPQGFVGVRLSARIHLTAVTLEHVPRALSPVSNITSAPKDFVILGLSEDSQVEGVAL----AKFTYDNAGE-AIQTFHFQ--------GNGTAPYQLVQLQVLSNWGHPDYTCIYRFRVHGKP 366
BLAST of NO08G01020 vs. NCBI_GenBank
Match: XP_020835730.1 (SUN domain-containing protein 2-like [Phascolarctos cinereus]) HSP 1 Score: 100.9 bits (250), Expect = 2.100e-17 Identity = 69/213 (32.39%), Postives = 104/213 (48.83%), Query Frame = 0 Query: 645 GPLETSVRR-VKEDLRLLYADNTDMIDYAADASGGKIVPHLSSATYSSPHQLVATDVLHSFGANA--HIGKRDGVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSVTKYPG--TAPRSFRVLGRKSTHVAEQPLLLHSQKNFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHGVP 853 G E VR V++ L+L D ++DYA ++SG I+ SS TY + T V+ FG H + +I+P G+CW +G G + V+L ++++ V++EHV R+++ +AP+ F +LG E L F YD E +QTF + +V L+VL NWG+ DYTC+YR RVHG P Sbjct: 638 GVTEEEVREIVRQALKLYSEDRIGLVDYALESSGASILSSHSSETYGT-----RTAVISLFGIPLWYHFQTQRAIIQPNVYP-GNCWAFRGPQGFVGVRLSARIHLTAVTLEHVPRALSPVSNITSAPKDFVILGLNEDSQVEGVAL----AKFTYDNAGE-AIQTFHFQ--------GNGTAPYQLVQLQVLSNWGHPDYTCIYRFRVHGKP 831
BLAST of NO08G01020 vs. NCBI_GenBank
Match: XP_020836081.1 (SUN domain-containing protein 2-like [Phascolarctos cinereus]) HSP 1 Score: 100.9 bits (250), Expect = 2.100e-17 Identity = 69/213 (32.39%), Postives = 104/213 (48.83%), Query Frame = 0 Query: 645 GPLETSVRR-VKEDLRLLYADNTDMIDYAADASGGKIVPHLSSATYSSPHQLVATDVLHSFGANA--HIGKRDGVIKPGAKTLGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSVTKYPG--TAPRSFRVLGRKSTHVAEQPLLLHSQKNFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHGVP 853 G E VR V++ L+L D ++DYA ++SG I+ SS TY + T V+ FG H + +I+P G+CW +G G + V+L ++++ V++EHV R+++ +AP+ F +LG E L F YD E +QTF + +V L+VL NWG+ DYTC+YR RVHG P Sbjct: 401 GVTEEEVREIVRQALKLYSEDRIGLVDYALESSGASILSSHSSETYGT-----RTAVISLFGIPLWYHFQTQRAIIQPNVYP-GNCWAFRGPQGFVGVRLSARIHLTAVTLEHVPRALSPVSNITSAPKDFVILGLNEDSQVEGVAL----AKFTYDNAGE-AIQTFHFQ--------GNGTAPYQLVQLQVLSNWGHPDYTCIYRFRVHGKP 594
BLAST of NO08G01020 vs. NCBI_GenBank
Match: XP_007393584.1 (hypothetical protein PHACADRAFT_252458 [Phanerochaete carnosa HHB-10118-sp] >EKM58261.1 hypothetical protein PHACADRAFT_252458 [Phanerochaete carnosa HHB-10118-sp]) HSP 1 Score: 100.5 bits (249), Expect = 2.700e-17 Identity = 70/226 (30.97%), Postives = 101/226 (44.69%), Query Frame = 0 Query: 670 DYAADASGGKIVPHLSSATYSSPHQLVATDVLHSFGANAHIGKRDGVIKPGAKT-LGDCWPLQGRSGSLTVQLKTPLNISHVSVEHVARSVTKYPGTAPRSFRVLG---------------------RKSTHVAEQ-----------------PLLLHSQK--NFVYDIYSERLVQTFALDRGLXXXXXXXXXXGFGVVTLEVLDNWGNNDYTCLYRLRVHGVPVG 855 DYA +SG I+P L+S T+ Q +A+ +L N + R V +T G CWP G G L V L TP++I+ V+++HVA+ V +APR + G R++ A + P + K +F Y+IY+ VQTFA+ + + FGVV L V NWG D+TCLYR R+HG +G Sbjct: 769 DYALYSSGASIIPSLTSDTFEMKPQGLASSLLGMVTGNGYAVGRPPVTALHHETHNGHCWPFSGTQGQLGVMLATPVHITDVTIDHVAKEVATDMRSAPRHIELWGLVEGGENVAKYEVLEAQRATEREAARAAAELAGEEYVEPKDSYPETLPRSVPYMKIADFAYNIYAPHHVQTFAVPQEI-----QDLGIDFGVVVLMVKSNWGREDFTCLYRFRIHGERLG 989 The following BLAST results are available for this feature:
BLAST of NO08G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01020 ID=NO08G01020|Name=NO08G01020|organism=Nannochloropsis oceanica|type=gene|length=2664bpback to top protein sequence of NO08G01020.1 >NO08G01020.1-protein ID=NO08G01020.1-protein|Name=NO08G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=888bpback to top Synonyms
Publications
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