NO08G01010, NO08G01010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01010 vs. NCBI_GenBank
Match: XP_016560252.1 (PREDICTED: protein SUPPRESSOR OF FRI 4 [Capsicum annuum]) HSP 1 Score: 134.0 bits (336), Expect = 9.200e-28 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 0 Query: 1 MGKKKSSLKREEAPDIWCYYCDRAFDDEATLLLHQKNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIP 92 MGKKK KR + +WCYYCDR FDDE L+ HQK +HFKC +C +KL++A GM IHV QVHKET+ KVP AKEGR+S D+EV+GMQGIP Sbjct: 1 MGKKK---KRSSSDKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIP 88
BLAST of NO08G01010 vs. NCBI_GenBank
Match: PHT27994.1 (BUB3-interacting and GLEBS motif-containing protein [Capsicum baccatum]) HSP 1 Score: 134.0 bits (336), Expect = 9.200e-28 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 0 Query: 1 MGKKKSSLKREEAPDIWCYYCDRAFDDEATLLLHQKNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIP 92 MGKKK KR + +WCYYCDR FDDE L+ HQK +HFKC +C +KL++A GM IHV QVHKET+ KVP AKEGR+S D+EV+GMQGIP Sbjct: 1 MGKKK---KRSSSDKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIP 88
BLAST of NO08G01010 vs. NCBI_GenBank
Match: PHT90922.1 (Protein SUPPRESSOR OF FRI 4 [Capsicum annuum]) HSP 1 Score: 134.0 bits (336), Expect = 9.200e-28 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 0 Query: 1 MGKKKSSLKREEAPDIWCYYCDRAFDDEATLLLHQKNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIP 92 MGKKK KR + +WCYYCDR FDDE L+ HQK +HFKC +C +KL++A GM IHV QVHKET+ KVP AKEGR+S D+EV+GMQGIP Sbjct: 1 MGKKK---KRSSSDKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIP 88
BLAST of NO08G01010 vs. NCBI_GenBank
Match: PHU26700.1 (BUB3-interacting and GLEBS motif-containing protein [Capsicum chinense]) HSP 1 Score: 134.0 bits (336), Expect = 9.200e-28 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 0 Query: 1 MGKKKSSLKREEAPDIWCYYCDRAFDDEATLLLHQKNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIP 92 MGKKK KR + +WCYYCDR FDDE L+ HQK +HFKC +C +KL++A GM IHV QVHKET+ KVP AKEGR+S D+EV+GMQGIP Sbjct: 1 MGKKK---KRSSSDKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIP 88
BLAST of NO08G01010 vs. NCBI_GenBank
Match: EWM26735.1 (zinc finger protein [Nannochloropsis gaditana]) HSP 1 Score: 132.5 bits (332), Expect = 2.700e-27 Identity = 62/73 (84.93%), Postives = 67/73 (91.78%), Query Frame = 0 Query: 36 KNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIPIEFRMERTAKKQQKAGN 109 KN+HFKCQLCPRKLTSASGMVIHV QVHKETLKK+PGAKEGRDSVDVEVFGMQGIP+E MER AKKQ+ G+ Sbjct: 68 KNKHFKCQLCPRKLTSASGMVIHVTQVHKETLKKIPGAKEGRDSVDVEVFGMQGIPMECLMERAAKKQRTGGD 140
BLAST of NO08G01010 vs. NCBI_GenBank
Match: EWM26736.1 (zinc finger protein [Nannochloropsis gaditana]) HSP 1 Score: 132.5 bits (332), Expect = 2.700e-27 Identity = 62/73 (84.93%), Postives = 67/73 (91.78%), Query Frame = 0 Query: 36 KNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIPIEFRMERTAKKQQKAGN 109 KN+HFKCQLCPRKLTSASGMVIHV QVHKETLKK+PGAKEGRDSVDVEVFGMQGIP+E MER AKKQ+ G+ Sbjct: 60 KNKHFKCQLCPRKLTSASGMVIHVTQVHKETLKKIPGAKEGRDSVDVEVFGMQGIPMECLMERAAKKQRTGGD 132
BLAST of NO08G01010 vs. NCBI_GenBank
Match: PLY64968.1 (hypothetical protein LSAT_8X106840 [Lactuca sativa]) HSP 1 Score: 132.1 bits (331), Expect = 3.500e-27 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 0 Query: 1 MGKKKSSLKREEAPDIWCYYCDRAFDDEATLLLHQKNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIP 92 MGKK K+ + D+WCYYCDR FDDE L+ HQK +HFKC +C +KL++A GM IHV QVHKET+ KVP AKEGR+S D+E++GMQGIP Sbjct: 1 MGKK----KKRVSSDVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEIYGMQGIP 87
BLAST of NO08G01010 vs. NCBI_GenBank
Match: XP_023745469.1 (protein SUPPRESSOR OF FRI 4 [Lactuca sativa]) HSP 1 Score: 132.1 bits (331), Expect = 3.500e-27 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 0 Query: 1 MGKKKSSLKREEAPDIWCYYCDRAFDDEATLLLHQKNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIP 92 MGKK K+ + D+WCYYCDR FDDE L+ HQK +HFKC +C +KL++A GM IHV QVHKET+ KVP AKEGR+S D+E++GMQGIP Sbjct: 1 MGKK----KKRVSSDVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEIYGMQGIP 87
BLAST of NO08G01010 vs. NCBI_GenBank
Match: XP_013661816.1 (protein SUPPRESSOR OF FRI 4 [Brassica napus] >CDY43176.1 BnaCnng11040D [Brassica napus]) HSP 1 Score: 131.7 bits (330), Expect = 4.600e-27 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 0 Query: 1 MGKKKSSLKREEAPDIWCYYCDRAFDDEATLLLHQKNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIP 92 MGKK K+ +WCYYCDR FDDE L+ HQK +HFKC +C +KL++ASGMVIHV QVHKE + KVP +KEGRDS+D+E++GMQGIP Sbjct: 1 MGKK----KKRATEKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMVIHVLQVHKENVTKVPNSKEGRDSIDIEIYGMQGIP 87
BLAST of NO08G01010 vs. NCBI_GenBank
Match: XP_009107749.1 (PREDICTED: protein SUPPRESSOR OF FRI 4-like isoform X1 [Brassica rapa]) HSP 1 Score: 131.7 bits (330), Expect = 4.600e-27 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0 Query: 1 MGKKKSSLKREEAPDIWCYYCDRAFDDEATLLLHQKNRHFKCQLCPRKLTSASGMVIHVAQVHKETLKKVPGAKEGRDSVDVEVFGMQGIP 92 MGKK K+ +WCYYCDR F+DE L+ HQK +HFKC C +KL+SASGMVIHV QVHKET+ KVP AK+GRDS D+E++GMQGIP Sbjct: 1 MGKK----KKRATEKVWCYYCDREFEDEKILVQHQKAKHFKCHACHKKLSSASGMVIHVLQVHKETVSKVPNAKDGRDSTDIEIYGMQGIP 87 The following BLAST results are available for this feature:
BLAST of NO08G01010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01010 ID=NO08G01010|Name=NO08G01010|organism=Nannochloropsis oceanica|type=gene|length=4548bpback to top protein sequence of NO08G01010.1 >NO08G01010.1-protein ID=NO08G01010.1-protein|Name=NO08G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bpback to top Synonyms
Publications
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