NO08G00460, NO08G00460 (gene) Nannochloropsis oceanica

Overview
NameNO08G00460
Unique NameNO08G00460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2807
Alignment locationchr8:182488..185294 +

Link to JBrowse

Properties
Property NameValue
DescriptionPoly polymerase gamma
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:182488..185294 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0031123RNA 3'-end processing
GO:0043631RNA polyadenylation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004652polynucleotide adenylyltransferase activity
GO:0003723RNA binding
GO:0016779nucleotidyltransferase activity
GO:0016740transferase activity
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR011068NuclTrfase_I_C
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR014492PolyA_polymerase
IPR007012PolA_pol_cen_dom
IPR007010PolA_pol_RNA-bd_dom
IPR002934Nucleotidyltransferase
Homology
BLAST of NO08G00460 vs. NCBI_GenBank
Match: XP_012208818.1 (hypothetical protein SPRG_14011 [Saprolegnia parasitica CBS 223.65] >KDO20493.1 hypothetical protein SPRG_14011 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 371.3 bits (952), Expect = 7.300e-99
Identity = 212/533 (39.77%), Postives = 305/533 (57.22%), Query Frame = 0
Query:   12 VLEQLLPVVSN---DAGDPRAAASLQEFISAHIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQG-GSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHLFPRAFPPCAGAGAAGRVEGGRGEMHAAQCFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            VLEQ    +     +A D   +  LQ ++  H P+E E+  +RR   + ELRS+F  WV+D C  + LPEE+   AGG + + GSY+L V+EPGADID  CV P  V R++FF+S  + L  H KV +L     A VPI++F  + ++ D+  A L   S+   ++V DD +L GVD  T  SLNGPR T ++ +L P   ++SF+AVLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF++L   WKWP  ++LCK  DA LG  VW    G  + ++MPI+TPAYP+ NS+YNVS  +L VMKEEF RG +++   +     D         W  L EPS +F+ +  YLA++++ S  E +AAW G  ESRLR LVD L       Y   Q+ + + + P+ FP C  +       GG             LAFD ++++ R   KE+ +   +  ++            +   + P+  R  G DV ++ V W+ LP  VF+ +GG+K+A+
Sbjct:   11 VLEQAYKAIRTTPPEAVDVEMSEKLQAYMDEHFPMEVEKNIQRRTIILGELRSIFRAWVKDVCLKRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTRDDFFSSLKDILLKHAKVTNLVAIEGAIVPILTFDYEEINIDLQIAILERNSIPENLNVLDDNILVGVDTPTEKSLNGPRVTELVIKLTPN--RSSFIAVLRIVRRWAKKRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMIL-TNWKWPLAIQLCKTHDAHLGLEVWNANVGGNKYQVMPILTPAYPSMNSSYNVSVHSLSVMKEEFKRGLEVVKTIIKDGGRD---------WSALFEPSPYFVDHQHYLAIEIYTSNVEDQAAWCGYAESRLRKLVDSL------AYYNPQLCR-LRVHPKKFPLCFASDPDDEKHGGA----------YFLAFDVDKLKLRN-SKEIHLNGAVDDFKM-----------NSLYRWPK--RVDGMDVKITPVVWKNLPEFVFEDIGGKKIAK 500          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: XP_008613177.1 (hypothetical protein SDRG_09044 [Saprolegnia diclina VS20] >EQC33537.1 hypothetical protein SDRG_09044 [Saprolegnia diclina VS20])

HSP 1 Score: 366.7 bits (940), Expect = 1.800e-97
Identity = 209/533 (39.21%), Postives = 304/533 (57.04%), Query Frame = 0
Query:   12 VLEQLLPVVSN---DAGDPRAAASLQEFISAHIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQG-GSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHLFPRAFPPCAGAGAAGRVEGGRGEMHAAQCFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            VLEQ    +     +A D   +  LQ ++  H P+E E+  +RR   + ELRS+F  WV+D C  + LPEE+   AGG + + GSY+L V+EPGADID  CV P  V R++FF+S  + L  H KV +L     A VPI++F  + ++ D+  A L   S+   ++V DD +L GVD  T  SLNGPR T ++ +L P   ++SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF++L   WKWP  ++LCK  DA LG  VW    G  + ++MPI+TPAYP+ NS+YNVS  +L VMKEEF RG +++   +     D         W  L EPS +F+ +  YLA++++ S  + +AAW G  ESRLR LVD L       Y   Q+ + + + P+ FP    +       GG             LAFD ++++ R   KE+ +   +  ++            +   + P+  R  G DV ++ V W+ LP  VF+ +GG+K+A+
Sbjct:   11 VLEQAYKAIRTTPPEAADVEMSEKLQAYMDEHFPMEVEKNIQRRTIILGELRSIFRAWVKDVCLKRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTRDDFFSSLKDILLKHTKVTNLVAIEGAIVPILTFDYEEINIDLQIAILERNSIPENLNVLDDNILVGVDTPTEKSLNGPRVTELVIKLTPN--RSSFISVLRIVRRWAKKRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMIL-TNWKWPLAIQLCKTHDAHLGLEVWNANVGGNKYQVMPILTPAYPSMNSSYNVSVHSLSVMKEEFKRGLEVVKTIIKDGGSD---------WSALFEPSPYFVDHQHYLAIEIYTSNVDDQAAWCGYAESRLRKLVDSL------AYYNPQLCR-LRVHPKKFPLSFASDPDDEKHGGT----------YFLAFDVDKLKLRN-SKEIHLNGAVDDFKM-----------NSLYRWPK--RVDGMDVKITPVVWKNLPEFVFEDIGGKKIAK 500          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: OQS01727.1 (Poly(A) polymerase [Achlya hypogyna])

HSP 1 Score: 365.5 bits (937), Expect = 4.000e-97
Identity = 212/533 (39.77%), Postives = 301/533 (56.47%), Query Frame = 0
Query:   12 VLEQLLPVVSNDAGDP---RAAASLQEFISAHIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQG-GSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHLFPRAFPPCAGAGAAGRVEGGRGEMHAAQCFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            VLEQ    +     +P     +  LQ ++  H P+E E+  +RR   + ELRS+F  WV+D C  + LPEE+   AGG + + GSY+L V+EPGADID  CV P  V RE+FFTS  + L  H KV +L     A VPI++F  + ++ D+  A L   S+   ++V DD +  GVD  T  SLNGPR T ++ +L P   +ASF+AVLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF++L   WKWP  ++LCK  DA LG  VW    G  + ++MPI+TPAYP+ NS+YNVS  +L VMKEEF RG +++   +     D         W  L EP+ +F+ +  YLAV+++ S  +  AAW G  ESRLR LVD L       Y   Q+ + + + P+ FP           +      H    F   +AFD ++++ R   KE+ +   +  ++                + P+  R +G DV ++ V W+ LP  VF+ LGG+KVA+
Sbjct:   10 VLEQAYKAIRTTPPEPVDLELSTKLQSYMDEHFPMEVEKNIQRRTIILGELRSIFRAWVKDVCLTRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFTSLKDILLKHVKVTNLVAIEGAVVPILTFDYEEINIDLQIAILERNSIPDNLNVLDDNIFVGVDTATEKSLNGPRVTELVIKLTPN--RASFIAVLRIVRRWAKKRGLYSNKMGYLGGVNYCILVCFINQLYPTAAPSTLLLRFFMIL-TNWKWPLAIQLCKTHDAKLGLEVWNANVGGNKYQVMPILTPAYPSMNSSYNVSVHSLNVMKEEFKRGLEVVKTIIKDGGSD---------WSALFEPTPYFVDHQHYLAVEIFTSNPDDSAAWCGYAESRLRKLVDSL------AYYNPQLCR-LRVHPKKFP------LTYVNDDPEDPKHGGTYF---VAFDVDKLKLRN-SKEIHLNGAVDDFKLT-----------SLYRWPK--RVEGMDVKITPVVWKNLPEFVFEDLGGKKVAK 500          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: XP_008874406.1 (hypothetical protein H310_09959 [Aphanomyces invadans] >ETV97160.1 hypothetical protein H310_09959 [Aphanomyces invadans])

HSP 1 Score: 365.2 bits (936), Expect = 5.200e-97
Identity = 208/533 (39.02%), Postives = 313/533 (58.72%), Query Frame = 0
Query:   12 VLEQL---LPVVSNDAGDPRAAASLQEFISAHIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQG-GSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHLFPRAFPPCAGAGAAGRVEGGRGEMHAAQCFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            VLEQ    + +   D  D   +A L+ F+++H P E+E+  +RR   + ELR +F  WV+D C  + + EE+   AGG V + GSY+L V+EPGADID  CV P  V RE+FF+S  + L  +PKV +L     A VPI++F  + ++ D+  A L  +S+   +++ DD +L GVD+ T  SLNGPR T ++ RL P   ++SF+AVLR+VR WAK RGLY+NK+GYLGGVN+ ILV  I Q+YP A P+ +L RFF+VL + WKWP+ ++LCK +DA LG  +W    G  R ++MPI+TPAYP+ NS+YNVS  +L VMKEEF+RG + +   +A    D         W  L  PS++F+ +  YLAV+M+ +    + AW G  ESRLR  ++ L       Y   Q+ + + ++P+ FP          +   + + H   C Y  +AFD ++ + R  GKEV +   +  ++            +   + P+  R +G D+ ++ + W+ LP  VF+ +GG KVA+
Sbjct:   12 VLEQAYKPIRITPPDPADLELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGIVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKDILLKNPKVTNLVAIEGATVPILTFDYEDINIDLQIAILDRSSIPDNINILDDNILSGVDSATEKSLNGPRVTELMIRLTPN--RSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQ-WKWPSAIQLCKTYDAKLGLEIWNANVGGNRFQVMPILTPAYPSMNSSYNVSVHSLSVMKEEFSRGLETVKAIIASGGTD---------WAPLFAPSEYFVDHQYYLAVEMYVADPNDQGAWCGFAESRLRKFIETL------AYHNPQLCR-LRVYPKKFPLFF---VNESIPLDQDKKHG--CTYF-VAFDVDKTKLR--GKEVRLDSAVDDFKV-----------NSLYRWPK--RVEGMDIRITPLGWKSLPESVFEEMGGLKVAK 504          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: CCI42012.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 362.8 bits (930), Expect = 2.600e-96
Identity = 212/554 (38.27%), Postives = 301/554 (54.33%), Query Frame = 0
Query:    1 MSTAGQPLKRAVLEQ---LLPVVSNDAGDPRAAASLQEFISAHIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQG-GSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHL--FPRAFPPCAG--------AGAAGRVEGGRGEMHAAQCFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            M ++  P+  + LEQ    + V   +  D   +  L++F+S H P E+     RR   + ELR++F  WV+  C  K +PEE+ A AGG + + GSY+L V+EPGADID  CV P  + RE+FFTS  +    H KV +L     A VP+++F  + ++ D+  A LP  ++   +++ +D +L GVDA T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P  +L RFF+VL   WKWP  ++LCK  D  LG  VW    G+ R  +MPI+TPAYP+ NS++NVST +L VMK+EF R  KI+ + L   +VD         W  L E SDFF     YLAVD++ +  E E AW G  ESR+R L++           L  +    HL  FP+ FP                 R    +       CFY+G   DR ++  R+V  +  +  F                 H  L +  ++R +  DV ++ V W+ LP  VF+ +GG  VA+
Sbjct:    1 MQSSPFPVAPSKLEQAYKAIRVTPPELMDLEQSKKLKDFMSKHFPTENGVNITRRSLILAELRTIFRNWVKQVCIKKGVPEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITREDFFTSLKKIFMQHSKVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGPRVTELMIKLTPN--RDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPTTLLLRFFMVLA-NWKWPLAIQLCKTEDVKLGLEVWNANVGNNRYHIMPILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEILNRGAVD---------WDPLFESSDFFAVQQHYLAVDVYTTNREDEQAWCGFCESRIRKLIE----------SLAYIPMLCHLRAFPKRFPLSFADEDHDENIETPTDRKNDVKETSKYGACFYVGFDIDRRQLRSREVSIDSSVDYF----------------KHNDLYR-WNKRSESMDVRITPVLWKNLPEYVFEEMGGRVVAK 515          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: XP_009035592.1 (hypothetical protein AURANDRAFT_24142, partial [Aureococcus anophagefferens] >EGB09531.1 hypothetical protein AURANDRAFT_24142, partial [Aureococcus anophagefferens])

HSP 1 Score: 360.9 bits (925), Expect = 9.800e-96
Identity = 190/413 (46.00%), Postives = 260/413 (62.95%), Query Frame = 0
Query:   41 IPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQGG----------STRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLAL-------ASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWF----GLVESRLRLLVDILDRELREIYGLGQVFKSVHLFPRAFP 433
            +PIES+ E RRR   + EL+ LF  WV+  C+AK L +E+ + AGG++Y  GSY+L VHEPGADID  CV P H  RE+FF +    L  HP+V++L    +A VPIM+F LDGV+ D+LFA LPL ++ A + +D+D VL+GVD  T  SLNGPR TN+I +L+  + + SFL VLRV RVWAK RG+Y+NK+GY GG+NFNILVA+ICQ++P A P+ +L +FF +   +W WP P  LC+  D G GF VW Q            + R  LMPI+TPAYPA NSA NV+  +  V+++EFARG ++  + +A         +VDP   V    W EL+E +DFF +Y+ YLAV++     +GE   F    G + SRLR LV+ +              K +HLFP+ +P
Sbjct:    5 VPIESDGELRRRERVMGELKRLFQAWVRSVCKAKGLSDELASEAGGKLYTSGSYRLRVHEPGADIDSICVAPNHCTREDFFDTLKAMLLEHPQVENLRSVETAVVPIMTFDLDGVNIDLLFAHLPLNAIPASLDIDEDAVLQGVDEATEKSLNGPRVTNLIYKLVSHNYE-SFLQVLRVARVWAKRRGIYSNKLGYFGGINFNILVALICQLFPKATPSYLLCKFFAIFA-KWDWPAPAILCRPLDHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEFARGAEVCKRIVARHAELAENGAVDPD--VGGPLWDELVEKTDFFDKYDAYLAVNV---LGDGEKEDFDNFKGFLSSRLRKLVEKMGH---------LPLKMIHLFPKEYP 401          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: GAX94806.1 (Hypothetical protein PINS_002703 [Pythium insidiosum])

HSP 1 Score: 360.1 bits (923), Expect = 1.700e-95
Identity = 208/502 (41.43%), Postives = 283/502 (56.37%), Query Frame = 0
Query:   40 HIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQG-GSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHLFPRAFPPCAGAGAAGRVEGGRGEMHAAQCFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            H P E+     RR   + ELR+ F +WV+  C AK +PE+  A AGG++ + GSY+L V+EPGADID  CV P HV RE+FFTS  +    +PK         A VPI++F  + ++ D+  A LP  ++   +++  D +L GVD  T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RG+Y+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF+VL   WKWP  ++LCK +DA LG  VW    G+ R + MPI+TPAYP+ NS++ VST +L VMKEEF RG +I+   L     +         W  L EPSDFF     YLAVD++ +  E E AW G  ESR+R LVD     L  I  L  +      FP +F     A   G    G  + + A CF++G   DR    R+ +GKE+ I   +  + F           H  L +   + P   DV +S   W+ LP CVF+ +GG   AR
Sbjct:    4 HFPTETPENITRRSMILAELRATFREWVKQVCLAKGVPEDXAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFTSLKDIFLKNPK--------GAIVPILTFDYEEINIDLQIAILPRNTIPDNLNILXDNILAGVDTATEKSLNGPRVTELMIKLTPN--RDSFISVLRIVRRWAKRRGIYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVL-SNWKWPLAIQLCKTYDAKLGLEVWNANYGNNRYQTMPILTPAYPSMNSSFXVSTHSLAVMKEEFKRGLEIVQDILNKGGDN---------WDALFEPSDFFGVQQHYLAVDVFTTKEEEEQAWCGFCESRVRKLVD----SLAFIPQLCHIRAFPKKFPLSFVDTGAAAPDGNDSAGATKRYGA-CFFVGFDIDR----RKLMGKELNIDNSV--YYFI----------HNDLYRWNKKTPT-MDVKISPTVWKNLPECVFEDMGGRATAR 463          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: OQS06970.1 (Poly(A) polymerase [Thraustotheca clavata])

HSP 1 Score: 358.2 bits (918), Expect = 6.400e-95
Identity = 203/522 (38.89%), Postives = 293/522 (56.13%), Query Frame = 0
Query:   23 DAGDPRAAASLQEFISAHIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWE-QGGSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHLFPRAFPPCAGAGAAGRVEGGRGEMHAAQCFYIGLAFDREEME---RRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            +  D   +A LQ ++  H P+E +   +RR   + ELRS+F  WV+D C  + LPEE+   AGG + + GSY+L V+EPGADID  CV P  V RE+FFTS  E L  H KV +L     A VPI++F  + ++ D+  A L   S+   ++V DD +L GVD  T  SLNGPR T ++ +L P   +ASF+AVLR+VR WAK RGLY+NKMGYLGGVN+ ILV  + Q+YP A P+ +L RFF++L   WKWP  ++LCK  DA LG  VW    G+ + ++MPI+TPAYP+ NS+Y+VS+ +L VMKEEF RG +++   +     D         W  L EPS FF+ +  YL V+++    +  AAW G VESRLR L++ L +   ++  L        + P+ +P     G          E H    F   +AFD ++++   +++V   V + +F  K  +  +                     G +  ++ V W+ LP  VF+ LGG K A+
Sbjct:   16 EPADLELSAKLQAYMDEHYPMELDVNIQRRTIILGELRSIFRAWVKDVCLKRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFTSLKEILLKHAKVTNLVAIEGALVPILTFDYEEINIDLQIAILDRNSIPDNINVLDDQILSGVDPATEKSLNGPRVTELVIKLTPN--RASFIAVLRIVRRWAKRRGLYSNKMGYLGGVNYCILVCFVNQLYPTAAPSTLLLRFFMIL-TNWKWPLAIQLCKTIDANLGLEVWNASNGTNKYQVMPILTPAYPSMNSSYSVSSHSLSVMKEEFKRGLEVVKTIIENGGTD---------WSPLFEPSPFFVDHQHYLIVEVFTYDEKDSAAWCGYVESRLRRLIESLAKHNPQLCRL-------RVHPKKYPLTFVGGE---------EKHGGTYF---VAFDVDKLKLRNQKEVHLNVAVDDFKAKHLYGWQ-----------------NYVGGMESKITPVTWKNLPEFVFEELGGRKPAK 489          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: CCA14636.1 (Poly(A) polymerase putative [Albugo laibachii Nc14])

HSP 1 Score: 356.3 bits (913), Expect = 2.400e-94
Identity = 208/554 (37.55%), Postives = 301/554 (54.33%), Query Frame = 0
Query:    1 MSTAGQPLKRAVLEQLLPVVSNDAGDP---RAAASLQEFISAHIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQG-GSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHL--FPRAFP-PCAGAGAAGRVEGGRGEMHAAQ-------CFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            M ++  P+  + LEQ    +     +P     +  L++++  H P E+     RR   + ELR++F  WV+  C  K +PEE+ A AGG + + GSY+L V+EPGADID  CV P  + RE+FFTS  +    H KV +L     A VP+++F  + ++ D+  A LP  ++   +++ +D +L GVDA T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P  +L RFF+VL   WKWP  ++LCK  D  LG  VW    G+ R  +MPI+TPAYP+ NS++NVST +L VMK+EF R  KI+ + L   +V+         W  L E SDFF     YLAVD++ +  E E AW    ESR+R L++           L  +    HL  FP+ FP    G     ++E      +  +       CFY+G   DR ++  R+V  +  +  F                 H  L +  ++R    DV ++ V W+ LP  VF+ +GG  VA+
Sbjct:    1 MQSSPFPVAPSKLEQAYKAIRVTPPEPIDLEQSKKLKDYMDKHFPTENMVNITRRSLILAELRTIFRDWVKQVCIRKGVPEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITREDFFTSLKKIFMQHSKVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGPRVTELMIKLTPN--RDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPTTLLLRFFMVLA-NWKWPLAIQLCKTEDVKLGLEVWNANVGNNRYHVMPILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEILNRGAVE---------WDPLFESSDFFAVQQHYLAVDVYTTNREDEQAWCSFCESRIRKLIE----------SLAYIPMLCHLRAFPKRFPLSFVGQDQDEKIETPTDRNNEEKETFKYGACFYVGFDIDRRQLRSREVSIDSSVDYF----------------KHNDLYR-WNKRSDSMDVRITPVLWKNLPDYVFEEMGGRIVAK 515          
BLAST of NO08G00460 vs. NCBI_GenBank
Match: CCI42014.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 350.1 bits (897), Expect = 1.700e-92
Identity = 209/554 (37.73%), Postives = 298/554 (53.79%), Query Frame = 0
Query:    1 MSTAGQPLKRAVLEQ---LLPVVSNDAGDPRAAASLQEFISAHIPIESEREQRRRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNMITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMICQMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQG-GSTRRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVDPTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDRELREIYGLGQVFKSVHL--FPRAFPPCAG--------AGAAGRVEGGRGEMHAAQCFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQQLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVAR 541
            M ++  P+  + LEQ    + V   +  D   +  L++F+S H P E+     RR   + ELR++F  WV+  C  K +PEE+ A AGG + + GSY+L V+EPGADID  CV P  + RE+FFTS  +    H KV +L     A VP+++F  + ++ D+  A LP  ++   +++ +D +L GVDA T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P  +L RFF+VL   WKWP  +   +  D  LG  VW    G+ R  +MPI+TPAYP+ NS++NVST +L VMK+EF R  KI+ + L   +VD         W  L E SDFF     YLAVD++ +  E E AW G  ESR+R L++           L  +    HL  FP+ FP                 R    +       CFY+G   DR ++  R+V  +  +  F                 H  L +  ++R +  DV ++ V W+ LP  VF+ +GG  VA+
Sbjct:    1 MQSSPFPVAPSKLEQAYKAIRVTPPELMDLEQSKKLKDFMSKHFPTENGVNITRRSLILAELRTIFRNWVKQVCIKKGVPEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITREDFFTSLKKIFMQHSKVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGPRVTELMIKLTPN--RDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPTTLLLRFFMVLA-NWKWPLAI---QTEDVKLGLEVWNANVGNNRYHIMPILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEILNRGAVD---------WDPLFESSDFFAVQQHYLAVDVYTTNREDEQAWCGFCESRIRKLIE----------SLAYIPMLCHLRAFPKRFPLSFADEDHDENIETPTDRKNDVKETSKYGACFYVGFDIDRRQLRSREVSIDSSVDYF----------------KHNDLYR-WNKRSESMDVRITPVLWKNLPEYVFEEMGGRVVAK 512          
The following BLAST results are available for this feature:
BLAST of NO08G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_012208818.17.300e-9939.77hypothetical protein SPRG_14011 [Saprolegnia paras... [more]
XP_008613177.11.800e-9739.21hypothetical protein SDRG_09044 [Saprolegnia dicli... [more]
OQS01727.14.000e-9739.77Poly(A) polymerase [Achlya hypogyna][more]
XP_008874406.15.200e-9739.02hypothetical protein H310_09959 [Aphanomyces invad... [more]
CCI42012.12.600e-9638.27unnamed protein product [Albugo candida][more]
XP_009035592.19.800e-9646.00hypothetical protein AURANDRAFT_24142, partial [Au... [more]
GAX94806.11.700e-9541.43Hypothetical protein PINS_002703 [Pythium insidios... [more]
OQS06970.16.400e-9538.89Poly(A) polymerase [Thraustotheca clavata][more]
CCA14636.12.400e-9437.55Poly(A) polymerase putative [Albugo laibachii Nc14... [more]
CCI42014.11.700e-9237.73unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009022NSK009022Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00460.1NO08G00460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669364gene_3373Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100141g10gene3996Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00460.1NO08G00460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00460 ID=NO08G00460|Name=NO08G00460|organism=Nannochloropsis oceanica|type=gene|length=2807bp
ATAGAACCCAGGGTTTACATGCACGTCTAGATATCTGTGGAGAGAACACT
GCGGCTCAAGAGCATACGAAGCCAACACCTAGCATTCCCCTCTCATCCTC
ATCCCGTGCAACCAGCTCAAGCCCCCCGACGCCACACCAAATGAGCACGG
CAGGCCAGCCCTTAAAACGGGCCGTCCTGGAGCAGCTCCTCCCGGTCGTG
AGTAATGATGCGGGCGACCCCCGGGCCGCCGCCAGCCTCCAAGAATTTAT
CTCGGCACACATCCCCATTGAGTCCGAACGGGAGCAACGCCGCCGCCGCG
ACAAGGTTTTAGAATTGCGTTCCCTGTTCTTGCAATGGGTGCAAGACACC
TGCCGTGCCAAAAACTTGCCAGAGGAAGTGGTGGCGGTGGCGGGTGGCGA
AGTCTACATCATGGGTAGCTACAAATTGAACGTGCACGAGCCGGGGGCAG
ATATCGATTTGTGTTGCGTTGTCCCCCTCCACGTAGCCCGCGAAGAATTC
TTCACCTCCTTCCTCGAAAAACTACGGTCTCACCCCAAGGTTAAGGACCT
GGCCTGCGCGGCCTCGGCACACGTGCCCATCATGAGCTTTGCCTTGGACG
GCGTGGACTTCGACGTGTTATTCGCGCAGCTACCTCTCACCTCCGTCAAG
GCCGGGATGAGCGTGGATGATGATCTGGTTCTACGAGGGGTAGACGCCAA
GACCTACCTCTCTCTCAACGGCCCCAGGACCACCAACATGATCACGAGGC
TCATCCCTACTTCGGCGCAAGCATCCTTCCTCGCCGTCTTGCGCGTGGTG
CGTGTCTGGGCCAAGAACCGCGGCCTCTACGCCAATAAAATGGGATACCT
CGGAGGTGTTAATTTTAACATCCTCGTCGCGATGATTTGTCAGATGTACC
CGTATGCAAACCCTGCTTTGATGCTCCACCGTTTTTTTTTGGTCCTGGGG
GAGAGGTGGAAGTGGCCGACGCCTGTGAGATTGTGTAAGAACTTCGATGC
GGGCTTGGGATTCACGGTGTGGGAACAGGGAGGGTCGACGCGGCGGGAGT
TGATGCCGATCATTACCCCGGCGTATCCCGCGGGGAACAGCGCCTACAAC
GTGAGCACGCAGACGTTGGGGGTCATGAAGGAGGAGTTCGCCAGAGGGAA
GAAGATCATGGACAAATGCCTTGCCTTGGCCTCGGTGGACCCGACGGGGG
CAGTGGCACGGGCAGCATGGCTGGAGTTAATAGAGCCGTCGGATTTTTTT
TTGCGGTACAATAGGTACTTGGCCGTGGACATGTGGGCGAGTACCGCAGA
AGGAGAAGCGGCCTGGTTCGGTCTCGTCGAATCACGCTTGAGATTATTGG
TGGATATTTTGGATAGGGAGTTGCGAGAGATTTATGGCCTAGGACAGGTC
TTTAAGAGCGTTCATCTATTCCCGCGGGCTTTTCCGCCTTGTGCGGGCGC
GGGGGCGGCGGGACGGGTGGAGGGAGGGAGAGGAGAGATGCATGCGGCGC
AGTGTTTTTACATCGGCTTGGCGTTTGATCGGGAGGAGATGGAGAGGAGG
AAGGTGGGGAAAGAGGTGTTTATTGGTGAGTTTATTCGGAAGTGGAGGTT
TGCCGTGGAGACTCCCCCTAGACCGCAGCCGGGGCATCAGCAGCTGCAGC
AGCCAAGAAGTCAACGGCCAAAGGGGTGTGACGTTCTGGTGAGCGAGGTG
AAATGGAGGGAGCTCCCTGCGTGTGTGTTTGACAGCTTGGGGGGGGAGAA
GGTGGCGAGGGCGAGGAGGAGGAGGGAGAGGGGAAAGGGGGGAAAGAAGC
AGAAGAAGGGGAAGAAGAGGGCCAGAAGGGGAGATGGGGAGGAAGAGGAG
GAGGAGGAAGAAGTGGAGGGAGGGTTGGCGGTGGCGGAAGGGCAGAAGGA
GGAGGGGAGGAAGGAGGGGGAGGGAGAAGAGGAGGACGAGATAGAAGGCT
TTACGCCCTTGCATACAGCAGCTTACACGGGAGACTTAATCACCGTCAAG
ATATTGACAAAGGAGGAAGAGGGGGAGGGAGAGGGAGGGAGGGAGGGAGG
GAGGGGGGGGTTAGTGGCGGTGAAGAGGGTGGATGCCTTAGATGCCAAAG
GGCGGACACCAGCACAGGTCGCGAGGGAGAGAGGCTTCGACGAAGTGGCT
TTGTATTTGGAAGGATTGATTGAGGAGGAGGGGGAGAGAGGAGGGGAAGG
AGGGGGGGGTGGGGAGGGGAATGGGAAAGTTAAGGAGAAAACGAATAATG
GGGGGCCGGCCTCAAGACTGCCTCCAGTGGACGGAAACGCGGAATATGAT
GATGCCGATGACGACGTCTTAGGGGCGGCCGAGGCAGCCATGGAGCAGGC
GATGGAAGAGGAGGAGGAGGAAGGGGGGAGGAAGGGAAGGAGGAAGTTGC
AGCTGGAAGAGCAGCCGCGGCAGCAGCGGCAGAGAAGAAGAGGAGGGAAG
AAGAGGAGGAAGAGGAGGTGGAGGAAATGAAGAAGAAGAAGGCGTTGCTC
ATGAGTGCGCACATGGTGATGGTGGAGGCGGGAGAGTTGAACCTAGAGCC
CTTTATACCAAGATGGAGGAAGGAGGCTATGCTGGTGCTGACGGGAGGGG
GGAGGGAGAGAGGGAGGGGGGAATGTTTGATTCGGACCCCTGTGGTGATG
GATCTGACCTTGGATGGGAATAAGGAAGAGGGGGAAGAAAAGGGGGAGGA
GAGGTCGGGGAAGAGGAGAGGGGAACGAGGGGGGAGACGCAAATGAGAAA
ATATGAATACATACACTGAGAAAGGATGGAAGGAGAAGAGAACGTGATGG
TGTCCAA
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protein sequence of NO08G00460.1

>NO08G00460.1-protein ID=NO08G00460.1-protein|Name=NO08G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=780bp
MSTAGQPLKRAVLEQLLPVVSNDAGDPRAAASLQEFISAHIPIESEREQR
RRRDKVLELRSLFLQWVQDTCRAKNLPEEVVAVAGGEVYIMGSYKLNVHE
PGADIDLCCVVPLHVAREEFFTSFLEKLRSHPKVKDLACAASAHVPIMSF
ALDGVDFDVLFAQLPLTSVKAGMSVDDDLVLRGVDAKTYLSLNGPRTTNM
ITRLIPTSAQASFLAVLRVVRVWAKNRGLYANKMGYLGGVNFNILVAMIC
QMYPYANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFTVWEQGGST
RRELMPIITPAYPAGNSAYNVSTQTLGVMKEEFARGKKIMDKCLALASVD
PTGAVARAAWLELIEPSDFFLRYNRYLAVDMWASTAEGEAAWFGLVESRL
RLLVDILDRELREIYGLGQVFKSVHLFPRAFPPCAGAGAAGRVEGGRGEM
HAAQCFYIGLAFDREEMERRKVGKEVFIGEFIRKWRFAVETPPRPQPGHQ
QLQQPRSQRPKGCDVLVSEVKWRELPACVFDSLGGEKVARARRRRERGKG
GKKQKKGKKRARRGDGEEEEEEEEVEGGLAVAEGQKEEGRKEGEGEEEDE
IEGFTPLHTAAYTGDLITVKILTKEEEGEGEGGREGGRGGLVAVKRVDAL
DAKGRTPAQVARERGFDEVALYLEGLIEEEGERGGEGGGGGEGNGKVKEK
TNNGGPASRLPPVDGNAEYDDADDDVLGAAEAAMEQAMEEEEEEGGRKGR
RKLQLEEQPRQQRQRRRGGKKRRKRRWRK*
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Synonyms
Publications