NO08G00290, NO08G00290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00290 vs. NCBI_GenBank
Match: GAQ83604.1 (pre-mRNA-processing factor 19 [Klebsormidium nitens]) HSP 1 Score: 349.0 bits (894), Expect = 2.600e-92 Identity = 203/510 (39.80%), Postives = 281/510 (55.10%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPV--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGEGVQAVAFDPSGQYLGVAAGTGIKVY----LAKAWSPVAEFNDHS 505 M C ISG +EPV+S SG ++EKR+ILK+I+ DP + + LT DDL+ +KS+K V+PR + S+PG+LA FQNEWDA +L T++L++ L R EL+ +LYQHDAA RVIARL +ERD A + L+ ++ A G E A A GI+ ++A++T+ LS+ RKKR +P L S + + ++T + H LH T+KPG++A D++ + ++TGG+D + VVFDR A + L GH KKV AV+F P D L+L+ S+DKTV++WK S + Y V L+ HASDV AL + AT HYF +AS DKTW +D +SG CL V DP++ GY C +FHPDG++LGTGT S VR+WDVK+QANVA FE H+GPV D V FD SG YL A G +++Y + + W+ V F D S Sbjct: 1 MFCSISGVTPQEPVVSTKSGALFEKRLILKHIKDIGVDPVSQDPLTEDDLLEIKSNKAVKPRLASGASIPGMLATFQNEWDAFVLSTYSLEQQLHTARQELSYSLYQHDAATRVIARLKKERDEARALLAETEARAA--AAPAEVAPHRPDVANGKRAPEEHAEAAPTKKAKAGITQEIVAEMTACNVELSQSRKKRQIPATLASADALERYTQLSSHPLHKTAKPGIIACDINS-DKDWILTGGVDAQVVVFDRPAGQIKATLAGHTKKVNAVKFVPQTD---LLLSASSDKTVRVWK--------------------GSDEGKYQCVHVLTDHASDVRALTLHATNHYFVTASSDKTWGFYDLASGLCLTQVADPSVTDGYTCASFHPDGLILGTGTAESLVRIWDVKSQANVAKFEGHSGPVNAISFSENGYFLATAARDGVKLWDLRKLKNFRTFAPWDADTDCNTVEFDHSGSYL-AAGGADVRIYAVGTVKQEWNTVKTFPDLS 483
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_017611730.1 (PREDICTED: pre-mRNA-processing factor 19 [Gossypium arboreum] >KHG28464.1 Pre-mRNA-processing factor 19 -like protein [Gossypium arboreum]) HSP 1 Score: 344.4 bits (882), Expect = 6.500e-91 Identity = 203/504 (40.28%), Postives = 283/504 (56.15%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E E P G G+SD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEALTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPASAATANVSALSNGKRAAESEDMGP--GGKRMRPGVSDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGVDSSAVLFDRTSGEILSTLSGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAI-AGSDIRVY--QVGSVKAEWN 474
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_022760346.1 (pre-mRNA-processing factor 19 homolog 1-like isoform X1 [Durio zibethinus]) HSP 1 Score: 344.4 bits (882), Expect = 6.500e-91 Identity = 203/504 (40.28%), Postives = 284/504 (56.35%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDL---GEGVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E E P A + G+SD+V+A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S +Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L +V FD SG YL + AG+ ++VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSMKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAEAERQAPFPASAVTASVSSLSNGKRAAENEDMGPGAKRMRP--GVSDSVIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKGIVATGGIDSSAVLFDRTSGEILSTLTGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGNYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDENTPTNSVDFDHSGSYLAI-AGSDVRVY--QVGSVKAEWN 474
BLAST of NO08G00290 vs. NCBI_GenBank
Match: PPD85647.1 (hypothetical protein GOBAR_DD17417 [Gossypium barbadense]) HSP 1 Score: 344.4 bits (882), Expect = 6.500e-91 Identity = 203/504 (40.28%), Postives = 283/504 (56.15%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E E P G G+SD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEALTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPASVATANVSALSNGKRAAESEDMGP--GGKRMRPGVSDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGVDSSAVLFDRTSGEILSTLNGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAI-AGSDIRVY--QVGSVKAEWN 474
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_012487307.1 (PREDICTED: pre-mRNA-processing factor 19 [Gossypium raimondii] >KJB38355.1 hypothetical protein B456_006G251300 [Gossypium raimondii]) HSP 1 Score: 342.8 bits (878), Expect = 1.900e-90 Identity = 202/504 (40.08%), Postives = 283/504 (56.15%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E E P G G+SD++++++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEVLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPASAATANVSALSNGKRAAESEDMGP--GGKRMRPGVSDSIISELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGVDSSAVLFDRTSGEILSTLNGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAI-AGSDIRVY--QVGSVKAEWN 474
BLAST of NO08G00290 vs. NCBI_GenBank
Match: EOY06172.1 (MOS4-associated complex 3A [Theobroma cacao]) HSP 1 Score: 342.4 bits (877), Expect = 2.500e-90 Identity = 200/492 (40.65%), Postives = 279/492 (56.71%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVY 490 M+C ISGEV EEPV+S+ SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L A R EL++ALYQHDAACRVIARL +ERD A S L+ + A E P A + GISD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY Sbjct: 1 MNCSISGEVPEEPVVSKKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHAARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPASAVTANVSALTNGKRAAEDVDMGPGAKRMRP--GISDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGIDSSAVLFDRTSGEILSTLSGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGICLTQVEDPSNSMGYTSAAFHPDGLILGTGTTEATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGTYLAI-AGSDIRVY 464
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_007035246.2 (PREDICTED: pre-mRNA-processing factor 19 homolog 1 isoform X1 [Theobroma cacao]) HSP 1 Score: 342.4 bits (877), Expect = 2.500e-90 Identity = 200/492 (40.65%), Postives = 279/492 (56.71%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVY 490 M+C ISGEV EEPV+S+ SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L A R EL++ALYQHDAACRVIARL +ERD A S L+ + A E P A + GISD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY Sbjct: 1 MNCSISGEVPEEPVVSKKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPVKAGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHAARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPASAVTANVSALTNGKRAAEDVDMGPGAKRMRP--GISDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGIDSSAVLFDRTSGEILSTLSGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGICLTQVEDPSNSMGYTSAAFHPDGLILGTGTTEATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGTYLAI-AGSDIRVY 464
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_022760347.1 (pre-mRNA-processing factor 19 homolog 1-like isoform X2 [Durio zibethinus]) HSP 1 Score: 342.4 bits (877), Expect = 2.500e-90 Identity = 203/504 (40.28%), Postives = 285/504 (56.55%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDL---GEGVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ ++ G E E P A + G+SD+V+A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S +Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L +V FD SG YL + AG+ ++VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSMKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLA--EAERQAPFPASAVTASVSSLSNGKRENEDMGPGAKRMRP--GVSDSVIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKGIVATGGIDSSAVLFDRTSGEILSTLTGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGNYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDENTPTNSVDFDHSGSYLAI-AGSDVRVY--QVGSVKAEWN 472
BLAST of NO08G00290 vs. NCBI_GenBank
Match: KJB38357.1 (hypothetical protein B456_006G251300 [Gossypium raimondii]) HSP 1 Score: 341.7 bits (875), Expect = 4.200e-90 Identity = 203/504 (40.28%), Postives = 284/504 (56.35%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ Q+ G E E P G G+SD++++++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEVLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLA--QAERQAPLPASAATANVSALSNGKRESEDMGP--GGKRMRPGVSDSIISELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGVDSSAVLFDRTSGEILSTLNGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAI-AGSDIRVY--QVGSVKAEWN 472
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_017975021.1 (PREDICTED: pre-mRNA-processing factor 19 homolog 1 isoform X2 [Theobroma cacao]) HSP 1 Score: 341.7 bits (875), Expect = 4.200e-90 Identity = 201/492 (40.85%), Postives = 280/492 (56.91%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVY 490 M+C ISGEV EEPV+S+ SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L A R EL++ALYQHDAACRVIARL +ERD A S L+ Q+ G E P A + GISD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY Sbjct: 1 MNCSISGEVPEEPVVSKKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPVKAGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHAARQELSHALYQHDAACRVIARLKKERDEARSLLA--QAERQAPLPASAVTANVSALTNGKREDVDMGPGAKRMRP--GISDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGIDSSAVLFDRTSGEILSTLSGHSKKVTSVKFVAQND---VFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGICLTQVEDPSNSMGYTSAAFHPDGLILGTGTTEATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGTYLAI-AGSDIRVY 462 The following BLAST results are available for this feature:
BLAST of NO08G00290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00290 ID=NO08G00290|Name=NO08G00290|organism=Nannochloropsis oceanica|type=gene|length=4622bpback to top protein sequence of NO08G00290.1 >NO08G00290.1-protein ID=NO08G00290.1-protein|Name=NO08G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bpback to top protein sequence of NO08G00290.2 >NO08G00290.2-protein ID=NO08G00290.2-protein|Name=NO08G00290.2|organism=Nannochloropsis oceanica|type=polypeptide|length=530bpback to top Synonyms
Publications
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