NO07G04600, NO07G04600 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_002288403.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93839.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 155.2 bits (391), Expect = 6.300e-34 Identity = 115/286 (40.21%), Postives = 147/286 (51.40%), Query Frame = 0
Query: 343 MFRWRGG-------KSEDGEE---VLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVN---TPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDM-EEVF-----------EDVDEKLG------------QRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAALAAGRRELQSRMTVA-------RDWMSD---ETLGAYI 582
M W GG S GEE V V I+ SAN RRI+ IV+ P+ DVW ILTDYDNL+ +VPNL S+ ++ T G + + RL+Q GAQ IIGF F A +TMDM EEV ++D L +RRI F+ VDS FS+F G W + E E T + Y V+V+PKGPVPV ALEWRI+EDVPTNLRAVK A+ ++ E +A GR ++ V D++ D ETLGAY+
Sbjct: 1 MVWWFGGTPGTSSETSTSGEECELVAVRIDRTSANSRRIAGEIVVAAPMMDVWAILTDYDNLSTHVPNLVASKRISGGQTSTG-EAGDGAYKCRLYQRGAQKIIGFEFGADVTMDMREEVVVAGKSGSITKSHELDAHLNEKTVSSTSAFPEERRINFKCVDSQFFSEFDGTWSVSQLPDNPFTGEPE-----TTVSYTVDVRPKGPVPVAALEWRIREDVPTNLRAVKRAATEVGLE-----GVMAKKTGGRVVVKKSKVVGAAQAQGFADFILDYENETLGAYL 275
BLAST of NO07G04600 vs. NCBI_GenBank
Match: OEU20999.1 (hypothetical protein FRACYDRAFT_163259, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 139.0 bits (349), Expect = 4.700e-29 Identity = 88/187 (47.06%), Postives = 111/187 (59.36%), Query Frame = 0
Query: 355 EEVLVNIESPSANVRRISSSIVI-NRPVQDVWRILTDYDNLAEYVPNLTQSRLV-----NTPAGW--QPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAV 534
E V V IE P++N RRI I I V DVW ILTDYD L+ +V NL +SR++ T G P + + +L+Q GAQ IIGF+F AS+TMDM E R+I F+ VDS FS+F G W +Q ++ + +E S Y V V+PKGPVPV ALEWRI+EDVPTNLRAV
Sbjct: 1 ELVAVRIERPTSNSRRIMGDISIPGVAVDDVWSILTDYDRLSTHVTNLKESRVIRENNKRTRGGVVNLPGDGSYKCQLYQVGAQKIIGFDFSASVTMDMTERIL-TSSTSNARKIYFKCVDSQFFSEFDGSWTVQ--EQISSTTGEKEVLCS----YDVLVRPKGPVPVAALEWRIREDVPTNLRAV 180
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_005535022.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM78736.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 137.1 bits (344), Expect = 1.800e-28 Identity = 82/209 (39.23%), Postives = 119/209 (56.94%), Query Frame = 0
Query: 361 IESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRM-------------RTACENEEWTY---STKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAA 554
IE+P+ N RRI++++ I+ P+ +W++LTDY++LAE++PNL SR P+G +RL QEG Q + GF F+A++ MDM EV + DE +R I F +V S FS F GEW L+ R A E + T+ ST L Y+V + P+ VPV +EWRI+ED+ NL AVK +E+ E + +A L A
Sbjct: 111 IEAPAHNCRRIAAAVQISAPIAVLWKVLTDYNHLAEFIPNLAVSRTCPHPSG--------GIRLQQEGIQNVFGFRFRAAVLMDMSEVVGNPDEVPQRRSIYFDMVQSRDFSRFEGEWYLEEIRETADDAGSVSPAEEDRAAAEGGDATHPVPSTILGYVVEIVPRHMVPVRLVEWRIREDLVPNLLAVKREAERRYLEAYRSEAMLQA 311
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_002288640.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94076.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 135.2 bits (339), Expect = 6.800e-28 Identity = 79/200 (39.50%), Postives = 115/200 (57.50%), Query Frame = 0
Query: 357 VLVNIESPSANVRRISSSIVINR--PVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQ--PRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEE-VFEDVDEKLGQ--------------RRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVAS 538
+LV IE S N RRIS ++++ P+ D+W +LTDYDNL+++VPNL +SR+V A RS+ ++Q GAQ I GF F A LTM+M E + +DV + Q R + F+ VDS F+ F G W ++ + +A + + + + Y+V++ PKG VPV ALEWRIKEDVP N+ V A+
Sbjct: 119 ILVQIERTSPNSRRISGEMILSNDIPLNDIWSVLTDYDNLSDHVPNLVESRVVGYTASTTGGGRSEGGSPMVYQRGAQRIFGFEFGADLTMEMSECIVDDVGLGIQQPLMDQVADVIPTRTRTLDFKCVDSLFFARFDGSWIVE---ELTSATSSNQKIIAVR--YVVDIVPKGVVPVAALEWRIKEDVPVNMLGVSSAA 313
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_005715024.1 (unnamed protein product [Chondrus crispus] >CDF35205.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 134.4 bits (337), Expect = 1.200e-27 Identity = 78/183 (42.62%), Postives = 108/183 (59.02%), Query Frame = 0
Query: 357 VLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEK 540
V V IE+P+ N R IS+S +I P++ VW +L+DYD LA+++PNL S L P +R+ Q G+Q I+GF F+ASLTMDM EV + R I+F LV S F+ F G WR++ + RTA L+Y V++ P+G VPV A+EWRI EDVP N+ AV+ E+
Sbjct: 64 VKVIIEAPAPNRRHISASNLIQAPLEIVWELLSDYDRLADHIPNLALSNLKAHP--------RNGIRVEQCGSQKILGFEFRASLTMDMTEVNRTSSD---WRAIEFDLVSSRDFNKFEGVWRMERVDQNRTA-----------LYYNVSIVPRGLVPVRAIEWRISEDVPGNMNAVRTECER 224
BLAST of NO07G04600 vs. NCBI_GenBank
Match: EJK62787.1 (hypothetical protein THAOC_16586 [Thalassiosira oceanica]) HSP 1 Score: 133.3 bits (334), Expect = 2.600e-27 Identity = 82/223 (36.77%), Postives = 113/223 (50.67%), Query Frame = 0
Query: 357 VLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAALAAGRRELQSRMTVARDWMSDETLGA 580
VLV IE+ N RRI+ +V++ P+ +W IL DYD+L+ VPNL +S++ N A ++ R++Q GAQ I GF F A +TMDM E F+ VDS F F G W ++ + R T + Y V+V+PKGPVPV ALEWRIKEDVP+N+ +V A+ + +G S + W DETL A
Sbjct: 786 VLVGIETTGMNSRRITGEVVMDAPLISIWNILKDYDSLSHKVPNLIESKITNPDA---VLTRGALPRVYQRGAQRIFGFEFGADVTMDMRERCMXXXXXXXD----FKCVDSQFFQQFDGSWTIERLAESR-----------TMVTYTVDVRPKGPVPVAALEWRIKEDVPSNMMSVGKAARQ--------------FNSGEVTTASPEQLDVSWYKDETLEA 976
BLAST of NO07G04600 vs. NCBI_GenBank
Match: EJK62105.1 (hypothetical protein THAOC_17296 [Thalassiosira oceanica]) HSP 1 Score: 128.6 bits (322), Expect = 6.400e-26 Identity = 85/248 (34.27%), Postives = 118/248 (47.58%), Query Frame = 0
Query: 357 VLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQT-----------------------IIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAALAAGRRELQSRMTVARDWMSDETLGAYI 582
VLV IE+ N RRI+ +V++ P+ +W IL DYD+L+ VPNL +S++ N A ++ R++Q GAQ I GF F A +TMDM E D + I F+ VDS F F G W ++ + R T + Y V+V+PKGPVPV ALEWRIKEDVP+N+ +V A+ + +G S + W DETL AY+
Sbjct: 62 VLVGIETTGMNSRRITGEVVMDAPLISIWNILKDYDSLSHKVPNLIESKITNPDA---VLTRGALPRVYQRGAQVSDLLFDINFTQVSSTHFVWYDKRIFGFEFGADVTMDMRERCMD-----DRGYIDFKCVDSQFFQQFDGSWTIERLAESR-----------TMVTYTVDVRPKGPVPVSALEWRIKEDVPSNMMSVGKAARQ--------------FNSGEVTTASPEQLDVSWYKDETLEAYL 276
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_005766974.1 (hypothetical protein EMIHUDRAFT_196943 [Emiliania huxleyi CCMP1516] >EOD14545.1 hypothetical protein EMIHUDRAFT_196943 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 128.3 bits (321), Expect = 8.300e-26 Identity = 78/185 (42.16%), Postives = 101/185 (54.59%), Query Frame = 0
Query: 357 VLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRT-ACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKL 541
V V+I + N R IS+SIV++ P + VW ILTDYDNL+ + EGAQ I+GF+F+ASLTMDM +AMF F GEWR+Q YSR R ++ Y+T+L Y V++ P+G VPV ALEWRI+EDVP NLRAV+ A+EKL
Sbjct: 44 VPVSISTTGFNSRCISASIVVSAPPEAVWAILTDYDNLSTH-----------------------------EGAQRIVGFDFRASLTMDM----------------------TAMFGAFEGEWRVQPYSRTRARGGSSDALEYTTRLSYKVDITPRGLVPVPALEWRIREDVPLNLRAVRAAAEKL 177
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_005707416.1 (cyclase/dehydrase [Galdieria sulphuraria] >EME30896.1 cyclase/dehydrase [Galdieria sulphuraria]) HSP 1 Score: 127.1 bits (318), Expect = 1.800e-25 Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 0
Query: 359 VNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKL 541
V IE P+ N+R I +V+ ++ VW +LTDY++LAE++PNL SRL P G +RL QEG Q+++GF F+AS+ +DM E F + + I F L DS F F G W + R WT+ L Y V V+PK VPV A+EWRI+EDVP+NL ++K E L
Sbjct: 100 VIIERPTRNIRTIICGLVVCANMKAVWDLLTDYEHLAEFIPNLAVSRLRYHPQG--------GIRLEQEGVQSVLGFRFRASVILDMYEKFSE-----DRAEIDFVLADSQDFDVFEGSWLMYPMKR--------NWTH---LIYQVTVQPKRFVPVQAVEWRIREDVPSNLHSIKNYIENL 257
BLAST of NO07G04600 vs. NCBI_GenBank
Match: OSX75863.1 (hypothetical protein BU14_0218s0029 [Porphyra umbilicalis]) HSP 1 Score: 119.4 bits (298), Expect = 3.900e-23 Identity = 78/182 (42.86%), Postives = 101/182 (55.49%), Query Frame = 0
Query: 359 VNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKL 541
V I +P+ N R I S+I+I + VW LTDY L+ ++PNL S+ P G +RL Q G Q I+GF FKA++ +DM EV D K +R I F L S F+ F G WR+ +A E T L Y VN++PKG VPV A+EWRIKEDVP+NL AV+ E L
Sbjct: 101 VAISAPAWNKRTIRSAILIRASLPTVWSALTDYSRLSTFIPNLAYSKQRFHPTG--------GIRLEQWGVQRIVGFQFKAAVVLDMTEV-TATDSK--ERAIDFVLASSRDFAAFFGTWRM-------SAVEGG----GTWLEYDVNIQPKGLVPVKAVEWRIKEDVPSNLLAVRSYCELL 260 The following BLAST results are available for this feature:
BLAST of NO07G04600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04600 ID=NO07G04600|Name=NO07G04600|organism=Nannochloropsis oceanica|type=gene|length=5675bpback to top protein sequence of NO07G04600.2 >NO07G04600.2-protein ID=NO07G04600.2-protein|Name=NO07G04600.2|organism=Nannochloropsis oceanica|type=polypeptide|length=604bpback to top protein sequence of NO07G04600.1 >NO07G04600.1-protein ID=NO07G04600.1-protein|Name=NO07G04600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=655bpback to top Synonyms
Publications
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