NO07G04530, NO07G04530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04530 vs. NCBI_GenBank
Match: CBJ25912.1 (putative: similar to cytoplasmic dynein intermediate chain [Ectocarpus siliculosus]) HSP 1 Score: 194.9 bits (494), Expect = 8.800e-46 Identity = 141/444 (31.76%), Postives = 203/444 (45.72%), Query Frame = 0 Query: 297 PAAKNAGSVKPSMTTEEKEAELSRPELVSFLSRASLLVERAVGQDESYNIFVEYCGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGARVGGEM---EGR----RAVMDLHWSPHFPELFLAAYSGINDGSGDIFPSSSNXXXXXXXXXXXXXXXXXFGAEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPXXXXXXXXXXXXXXXXXXXXXXXNVSITAFTLQRDGKGEDEMVVGGESGHMY---LHFPXXXXXXXXXXXXXXXXXXXXRGAMPRQWEGHNGLITGLSQHPSSLXXXXXXXXXXXXXXXALGPLVLSSSVDWTIKLW 731 P A + KP ++ +EK+ + FL R+S ++ERA+G+ E+ ++ ++Y G +G R+ M E R R++ DL WSPH PEL LA+Y+ G S+ + + DGLVLVWS+A+ RPE + + SPVLT+RFHP D H++ GGTYSGQVV WDTRAK+LPVQR+PLS GHT+PVY L + G+ ++ +LL+AS +GRV W+ QLSQPL+ ++ H G P V+I++ + + G + +VVG ESG +Y LHF + ++ GH GL+T + +PS+ L LVLSSSVDWT +LW Sbjct: 259 PMTPPATAAKP-LSVDEKKEIVQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAGD-----------------------------------------EGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALH--------------------TDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNA---PSLLTASTEGRVSTWNPSQLSQPLQDINLTH-AGKP------------------------VTISSMAVAQ-GDEQKNIVVGSESGGIYTTPLHF--------------------RNSGVVEEYSGHYGLVTSVDANPSA--------------SKPLRGLVLSSSVDWTTRLW 577
BLAST of NO07G04530 vs. NCBI_GenBank
Match: XP_004359310.1 (cytoplasmic dynein intermediate chain [Cavenderia fasciculata] >EGG21460.1 cytoplasmic dynein intermediate chain [Cavenderia fasciculata]) HSP 1 Score: 160.2 bits (404), Expect = 2.400e-35 Identity = 106/331 (32.02%), Postives = 148/331 (44.71%), Query Frame = 0 Query: 404 GARVGGEMEGRRAVMDLHWSPHFPELFLAAYSGINDGSGDIFPSSSNXXXXXXXXXXXXXXXXXFGAEEMDGLVLVWSL-ALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPXXXXXXXXXXXXXXXXXXXXXXXNVSITAFTLQRDGKGEDEM---VVGGESGHMYLHFPXXXXXXXXXXXXXXXXXXXXRGAMPRQWEGHNGLITGLSQHPSSLXXXXXXXXXXXXXXXALGPLVLSSSVDWTIKLW 731 G V R+V D++WSP PEL + +YS GS D DG+VLVWS+ +PE F C SPV+T+ F P L+ GGTYSGQ+V WDTR+K+ PVQR+PLS+ GHTHPVY++ V GS ++ TL+S S DG++C W++ LSQP+E + + ++++T+ Q E EM VG E G +Y + + +++GH+G IT + HPS G L LSSS DWT +LW Sbjct: 257 GTLVDERWSKHRSVTDINWSPKHPELVVTSYSANETGSHD-----------------------------PDGVVLVWSVNNFYQKPEYVFNCQSPVMTTFFSRFHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMSVVGSTNA---NTLISVSTDGKLCSWNLDNLSQPVETLDLNAKNN----------------TSSTVSATSSIAVTSLVFQ-----ETEMNAFFVGSEDGSIY-----------------QAHRHGSKTGISDRYKGHHGPITSIDFHPS-------------RGSIDFGNLFLSSSTDWTTRLW 504
BLAST of NO07G04530 vs. NCBI_GenBank
Match: GAY01722.1 (Hypothetical protein PINS_009559, partial [Pythium insidiosum]) HSP 1 Score: 159.8 bits (403), Expect = 3.100e-35 Identity = 105/349 (30.09%), Postives = 156/349 (44.70%), Query Frame = 0 Query: 303 GSVKPSMTTEEKEAELSRPELVSFLSRASLLVERAVGQDESYNIFVEYCGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGARVGGEMEGRRAVMDLHWSPHFPELFLAAYSG---INDGSGDIFPSSSNXXXXXXXXXXXXXXXXXFGAEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPXXXXXXXXXXXXXXXXXXXXXXXNVSITAFTLQRDGKGEDEMVVGGESGHMY 649 G V ++ EEK+ + L F+ +AS ++ERA+ Y+I ++Y + RAV D+ SP +PEL L +Y+ + + ++ P +++ + DG+VL+WS ALP+RPE RF C S V ++ F+P D +L+FGGTYSGQ+V WDTRAK+ PVQ++ LS+ HTHPVY+L V GS S L+SAS DGRVC WD+ QL QPLE+ +R ++T F + R K ++ +G E+G +Y Sbjct: 173 GDVPMGLSDEEKKKIMQSESLEEFILKASRVIERALTTSSKYDIMIDYGATVEDDQLPDDVAQTLKPLFTFKDE---------------------------------QWTRYRAVTDVDVSPFYPELLLVSYTARDFLEEEERELGPRNASNAALSASSSSALLADL---SRTTDGVVLLWSTALPTRPEYRFTCHSQVTSACFNPFDRNLIFGGTYSGQIVVWDTRAKSAPVQKTSLSSGSHTHPVYSLAVVGSKSSYH---LVSASTDGRVCVWDVDQLQQPLEMLDLR---------IAVSIVSNYSSVNIATDKKMEAAVTTFAIHR--KENKQLYIGTEAGKLY 471
BLAST of NO07G04530 vs. NCBI_GenBank
Match: ETI37794.1 (hypothetical protein F443_16342 [Phytophthora parasitica P1569] >ETK78002.1 hypothetical protein L915_15893 [Phytophthora parasitica] >ETL31435.1 hypothetical protein L916_15789 [Phytophthora parasitica] >ETL84691.1 hypothetical protein L917_15587 [Phytophthora parasitica] >ETM37833.1 hypothetical protein L914_15738 [Phytophthora parasitica] >ETP07687.1 hypothetical protein F441_16161 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 156.8 bits (395), Expect = 2.600e-34 Identity = 103/349 (29.51%), Postives = 155/349 (44.41%), Query Frame = 0 Query: 308 SMTTEEKEAELSRPELVSFLSRASLLVERAVGQDESYNIFVEYCGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGARVGGEMEGRRAVMDLHWSPHFPELFLAAYSGIN--------DGSGDIFPSSSNXXXXXXXXXXXXXXXXXFGAEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPXXXXXXXXXXXXXXXXXXXXXXXNVSITAFTLQRDGKGEDEMVVGGESGHMY 649 +++ E+K + + + +FL++AS ++ERA+ Y+I ++Y ++ + RAV D+ SP +PEL L AY+ N DG + + N A +G+VL+WS ALP RPE RF C S V ++ F+P D H++ GGTYSGQ+V WDTRAK+ PVQ++ LS HTHP+YA+ V G+ S TL+SAS DGRVC WD+ L +PL++ +R S+T+F + GK E+ +G E+G +Y Sbjct: 184 TLSVEDKTSLMQSDAMEAFLTKASRVIERALNTSSKYDIMIDY---------------------------------GADVEQDSAVEEATESLKQQYVFADSQWSKHRAVTDVDVSPFYPELTLVAYTARNFLEDEDKDDGMSSQWDTMGNSATAALTEV----------AAITEGVVLLWSTALPGRPEYRFTCHSQVTSACFNPFDRHIIIGGTYSGQIVVWDTRAKSAPVQKTALSAFSHTHPIYAMAVAGTKTS---YTLISASTDGRVCVWDLDHLQKPLDMLDLR----------ISLSIVSNYTSVNTSDKKMEASVTSFAVL--GKEIKELFIGTEAGKLY 474
BLAST of NO07G04530 vs. NCBI_GenBank
Match: ETI37795.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK78003.1 hypothetical protein, variant [Phytophthora parasitica] >ETL31436.1 hypothetical protein, variant [Phytophthora parasitica] >ETL84692.1 hypothetical protein, variant [Phytophthora parasitica] >ETM37834.1 hypothetical protein, variant [Phytophthora parasitica] >ETP07688.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 156.8 bits (395), Expect = 2.600e-34 Identity = 103/349 (29.51%), Postives = 155/349 (44.41%), Query Frame = 0 Query: 308 SMTTEEKEAELSRPELVSFLSRASLLVERAVGQDESYNIFVEYCGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGARVGGEMEGRRAVMDLHWSPHFPELFLAAYSGIN--------DGSGDIFPSSSNXXXXXXXXXXXXXXXXXFGAEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPXXXXXXXXXXXXXXXXXXXXXXXNVSITAFTLQRDGKGEDEMVVGGESGHMY 649 +++ E+K + + + +FL++AS ++ERA+ Y+I ++Y ++ + RAV D+ SP +PEL L AY+ N DG + + N A +G+VL+WS ALP RPE RF C S V ++ F+P D H++ GGTYSGQ+V WDTRAK+ PVQ++ LS HTHP+YA+ V G+ S TL+SAS DGRVC WD+ L +PL++ +R S+T+F + GK E+ +G E+G +Y Sbjct: 184 TLSVEDKTSLMQSDAMEAFLTKASRVIERALNTSSKYDIMIDY---------------------------------GADVEQDSAVEEATESLKQQYVFADSQWSKHRAVTDVDVSPFYPELTLVAYTARNFLEDEDKDDGMSSQWDTMGNSATAALTEV----------AAITEGVVLLWSTALPGRPEYRFTCHSQVTSACFNPFDRHIIIGGTYSGQIVVWDTRAKSAPVQKTALSAFSHTHPIYAMAVAGTKTS---YTLISASTDGRVCVWDLDHLQKPLDMLDLR----------ISLSIVSNYTSVNTSDKKMEASVTSFAVL--GKEIKELFIGTEAGKLY 474
BLAST of NO07G04530 vs. NCBI_GenBank
Match: XP_008911459.1 (hypothetical protein PPTG_16370 [Phytophthora parasitica INRA-310] >ETN03343.1 hypothetical protein PPTG_16370 [Phytophthora parasitica INRA-310] >ETO66562.1 hypothetical protein F444_16332 [Phytophthora parasitica P1976] >KUF77271.1 Cytoplasmic dynein 1 intermediate chain [Phytophthora nicotianae] >KUF89450.1 hypothetical protein AM588_10008329 [Phytophthora nicotianae]) HSP 1 Score: 156.8 bits (395), Expect = 2.600e-34 Identity = 103/349 (29.51%), Postives = 155/349 (44.41%), Query Frame = 0 Query: 308 SMTTEEKEAELSRPELVSFLSRASLLVERAVGQDESYNIFVEYCGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGARVGGEMEGRRAVMDLHWSPHFPELFLAAYSGIN--------DGSGDIFPSSSNXXXXXXXXXXXXXXXXXFGAEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPXXXXXXXXXXXXXXXXXXXXXXXNVSITAFTLQRDGKGEDEMVVGGESGHMY 649 +++ E+K + + + +FL++AS ++ERA+ Y+I ++Y ++ + RAV D+ SP +PEL L AY+ N DG + + N A +G+VL+WS ALP RPE RF C S V ++ F+P D H++ GGTYSGQ+V WDTRAK+ PVQ++ LS HTHP+YA+ V G+ S TL+SAS DGRVC WD+ L +PL++ +R S+T+F + GK E+ +G E+G +Y Sbjct: 184 TLSVEDKTSLMQSDAMEAFLTKASRVIERALNTSSKYDIMIDY---------------------------------GADVEQDSAVEEATESLKQQYVFADSQWSKHRAVTDVDVSPFYPELTLVAYTARNFLEDEDKDDGMSSQWDTMGNSATAALTEV----------AAITEGVVLLWSTALPGRPEYRFTCHSQVTSACFNPFDRHIIIGGTYSGQIVVWDTRAKSAPVQKTALSAFSHTHPIYAMAVAGTKTS---YTLISASTDGRVCVWDLDHLQKPLDMLDLR----------ISLSIVSNYTSVNTSDKKMEASVTSFAVL--GKEIKELFIGTEAGKLY 474
BLAST of NO07G04530 vs. NCBI_GenBank
Match: XP_008911460.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETN03344.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETO66563.1 hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 156.8 bits (395), Expect = 2.600e-34 Identity = 103/349 (29.51%), Postives = 155/349 (44.41%), Query Frame = 0 Query: 308 SMTTEEKEAELSRPELVSFLSRASLLVERAVGQDESYNIFVEYCGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGARVGGEMEGRRAVMDLHWSPHFPELFLAAYSGIN--------DGSGDIFPSSSNXXXXXXXXXXXXXXXXXFGAEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPXXXXXXXXXXXXXXXXXXXXXXXNVSITAFTLQRDGKGEDEMVVGGESGHMY 649 +++ E+K + + + +FL++AS ++ERA+ Y+I ++Y ++ + RAV D+ SP +PEL L AY+ N DG + + N A +G+VL+WS ALP RPE RF C S V ++ F+P D H++ GGTYSGQ+V WDTRAK+ PVQ++ LS HTHP+YA+ V G+ S TL+SAS DGRVC WD+ L +PL++ +R S+T+F + GK E+ +G E+G +Y Sbjct: 184 TLSVEDKTSLMQSDAMEAFLTKASRVIERALNTSSKYDIMIDY---------------------------------GADVEQDSAVEEATESLKQQYVFADSQWSKHRAVTDVDVSPFYPELTLVAYTARNFLEDEDKDDGMSSQWDTMGNSATAALTEV----------AAITEGVVLLWSTALPGRPEYRFTCHSQVTSACFNPFDRHIIIGGTYSGQIVVWDTRAKSAPVQKTALSAFSHTHPIYAMAVAGTKTS---YTLISASTDGRVCVWDLDHLQKPLDMLDLR----------ISLSIVSNYTSVNTSDKKMEASVTSFAVL--GKEIKELFIGTEAGKLY 474
BLAST of NO07G04530 vs. NCBI_GenBank
Match: CCI41358.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 156.8 bits (395), Expect = 2.600e-34 Identity = 84/177 (47.46%), Postives = 107/177 (60.45%), Query Frame = 0 Query: 415 RAVMDLHWSPHFPELFLAAYSGINDGSGDIFPSSSNXXXXXXXXXXXXXXXXXFG-AEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVR 591 RAV DL S FPEL LA+YS + S +N AE +GLVL+WS ALPSRPE RF C + V + F+P D H++ GGTYSGQ+V WDTRAK PVQ++P+ST+ HTHP+Y++ + GS S L+SAS DGRVC WD QL QP++V +R Sbjct: 273 RAVTDLDVSMFFPELLLASYS----SREFLEQSDANMSNQWDSLVSQVESTEKLDLAEITEGLVLLWSTALPSRPEYRFTCHAQVTAACFNPFDRHIVIGGTYSGQIVVWDTRAKNTPVQKTPMSTSSHTHPIYSMAIIGSKTS---YNLISASTDGRVCIWDTDQLQQPVDVFDLR 442
BLAST of NO07G04530 vs. NCBI_GenBank
Match: CCI41359.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 156.8 bits (395), Expect = 2.600e-34 Identity = 84/177 (47.46%), Postives = 107/177 (60.45%), Query Frame = 0 Query: 415 RAVMDLHWSPHFPELFLAAYSGINDGSGDIFPSSSNXXXXXXXXXXXXXXXXXFG-AEEMDGLVLVWSLALPSRPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVR 591 RAV DL S FPEL LA+YS + S +N AE +GLVL+WS ALPSRPE RF C + V + F+P D H++ GGTYSGQ+V WDTRAK PVQ++P+ST+ HTHP+Y++ + GS S L+SAS DGRVC WD QL QP++V +R Sbjct: 251 RAVTDLDVSMFFPELLLASYS----SREFLEQSDANMSNQWDSLVSQVESTEKLDLAEITEGLVLLWSTALPSRPEYRFTCHAQVTAACFNPFDRHIVIGGTYSGQIVVWDTRAKNTPVQKTPMSTSSHTHPIYSMAIIGSKTS---YNLISASTDGRVCIWDTDQLQQPVDVFDLR 420
BLAST of NO07G04530 vs. NCBI_GenBank
Match: GBG24376.1 (Cytoplasmic dynein 1 intermediate chain 2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 156.4 bits (394), Expect = 3.500e-34 Identity = 99/317 (31.23%), Postives = 139/317 (43.85%), Query Frame = 0 Query: 415 RAVMDLHWSPHFPELFLAAYSGINDGSGDIFPSSSNXXXXXXXXXXXXXXXXXFGAEEMDGLVLVWSLALPS-RPELRFACPSPVLTSRFHPSDPHLLFGGTYSGQVVAWDTRAKALPVQRSPLSTAGHTHPVYALEVQGSGDSIQPQTLLSASADGRVCRWDIRQLSQPLEVTHVRHYDGCPXXXXXXXXXXXXXXXXXXXXXXXNVSITAFTLQRDGKGEDEMVVGGESGHMYLHFPXXXXXXXXXXXXXXXXXXXXRGAMPRQWEGHNGLITGLSQHPSSLXXXXXXXXXXXXXXXALGPLVLSSSVDWTIKLW 731 R V D+ WSPH ELFLAAY+ GA + G+VL+WS + S RPE F CPSPV + FHP +L+ GGTYSGQ+V WD RAK++PVQRS LS HTHPVY++ V GS ++ L+S S DGR+C W++ +S P + +++ +TA +L +E+ VG E G ++ + + Q E H G +T + H + A L+LS+S+DWT+KLW Sbjct: 296 RTVTDIQWSPHHKELFLAAYT---------------------KRMVSSELDWARGASDPSGVVLIWSTHMSSERPEYVFTCPSPVHAACFHPYSANLVIGGTYSGQIVLWDMRAKSVPVQRSLLSPESHTHPVYSMTVTGSANA---HNLVSVSTDGRLCVWNLANISAPTDSRQLKY---------------------------NKKDVTATSLAFADGETNELFVGAEDGRLF-----------------RAQVHGTKAGVQSQTEAHFGPVTKMHFHKGT---------------SATADLMLSASMDWTVKLW 529 The following BLAST results are available for this feature:
BLAST of NO07G04530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04530 ID=NO07G04530|Name=NO07G04530|organism=Nannochloropsis oceanica|type=gene|length=4589bpback to top protein sequence of NO07G04530.1 >NO07G04530.1-protein ID=NO07G04530.1-protein|Name=NO07G04530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=733bpback to top Synonyms
Publications
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