NO07G02850, NO07G02850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02850 vs. NCBI_GenBank
Match: EWM27111.1 (tbp-associated factor 15b [Nannochloropsis gaditana]) HSP 1 Score: 255.0 bits (650), Expect = 2.500e-64 Identity = 122/141 (86.52%), Postives = 134/141 (95.04%), Query Frame = 0 Query: 9 SAQTLVAGGVETVADLAGLDYQDLSKYDISREIRDKLGRVLDKLRVNGTIFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSMVSYGE 150 +A+ LVA GVETVADLAGL+Y+DL Y + ++IRDKLGRVLDKLRVNGT+FISGL+P+TTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRD+SGKSKGECVLTYEEPNSAHASISFFHGTELAG+ LKVSMVSYGE Sbjct: 47 AAKALVAAGVETVADLAGLEYRDLGSYGLPQDIRDKLGRVLDKLRVNGTVFISGLNPATTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDDSGKSKGECVLTYEEPNSAHASISFFHGTELAGRKLKVSMVSYGE 187
BLAST of NO07G02850 vs. NCBI_GenBank
Match: GBG34743.1 (RNA-binding protein, putative [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 109.8 bits (273), Expect = 1.300e-20 Identity = 49/95 (51.58%), Postives = 67/95 (70.53%), Query Frame = 0 Query: 48 VLDKLRVNGTIFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKV 143 V D N I+ISGL TTE E+A++FG +G++ + KQKRGYPDQWPYKI +Y D+ GK KG+ V+ YE+PN+A ++ FF+GTE G + V Sbjct: 214 VRDPTDDNTRIYISGLPSDTTEQELADHFGGLGVIARKKQKRGYPDQWPYKITIYTDDQGKPKGDAVIGYEDPNAAQSAPEFFNGTEFKGCKINV 308
BLAST of NO07G02850 vs. NCBI_GenBank
Match: EPS58304.1 (hypothetical protein M569_16511 [Genlisea aurea]) HSP 1 Score: 109.0 bits (271), Expect = 2.200e-20 Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 0 Query: 55 NGTIFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSM 145 N I+IS L P T E+ E FG IG V ++KQKRGY DQWP+ IK+Y DE GK+KG+ VL+YE+P++AH++ FF+G E+ G +KVSM Sbjct: 225 NARIYISNLPPDVTIDELRELFGSIGQVARIKQKRGYKDQWPWSIKLYTDEQGKNKGDAVLSYEDPSAAHSAGGFFNGHEMRGHKIKVSM 314
BLAST of NO07G02850 vs. NCBI_GenBank
Match: XP_024401561.1 (transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024401562.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024401563.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024401564.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024401565.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024401566.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024401567.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024401568.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024401569.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >PNR35695.1 hypothetical protein PHYPA_021545 [Physcomitrella patens]) HSP 1 Score: 107.8 bits (268), Expect = 4.900e-20 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 0 Query: 55 NGTIFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSMVS 147 N I+ISGL E E+ E FG IG V ++KQKRGY DQWPY IK+Y+DESGK+KG+ VL+YE+P++AH++ FF+ E+ G +KV+M + Sbjct: 208 NARIYISGLPLDVKEDELQELFGGIGQVARVKQKRGYKDQWPYNIKIYQDESGKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAMAA 299
BLAST of NO07G02850 vs. NCBI_GenBank
Match: XP_024391594.1 (transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024391595.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024391596.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024391597.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >XP_024391598.1 transcription initiation factor TFIID subunit 15b-like [Physcomitrella patens] >PNR43374.1 hypothetical protein PHYPA_015754 [Physcomitrella patens]) HSP 1 Score: 107.8 bits (268), Expect = 4.900e-20 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 0 Query: 55 NGTIFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSMVS 147 N I+ISGL E E+ E FG IG V ++KQKRGY DQWPY IK+Y+DESGK+KG+ VL+YE+P++AH++ FF+ E+ G +KV+M + Sbjct: 211 NARIYISGLPLDVKEDELRELFGGIGQVARIKQKRGYKDQWPYNIKIYQDESGKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAMAA 302
BLAST of NO07G02850 vs. NCBI_GenBank
Match: XP_021716275.1 (transcription initiation factor TFIID subunit 15b-like [Chenopodium quinoa]) HSP 1 Score: 107.5 bits (267), Expect = 6.400e-20 Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 0 Query: 55 NGTIFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSM 145 N I+IS L P E+ E FG IGIV ++KQKRGY DQWPY IK+Y D+SGK+KG+ VL+YE+P++AH++ FF+G ++ G + V+M Sbjct: 327 NSRIYISNLPPDVAIEELRELFGSIGIVARIKQKRGYKDQWPYSIKLYTDDSGKNKGDGVLSYEDPSAAHSARGFFNGYDIRGHKINVTM 416
BLAST of NO07G02850 vs. NCBI_GenBank
Match: XP_021720985.1 (transcription initiation factor TFIID subunit 15b-like [Chenopodium quinoa]) HSP 1 Score: 107.5 bits (267), Expect = 6.400e-20 Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 0 Query: 55 NGTIFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSM 145 N I+IS L P E+ E FG IGIV ++KQKRGY DQWPY IK+Y D+SGK+KG+ VL+YE+P++AH++ FF+G ++ G + V+M Sbjct: 330 NSRIYISNLPPDVAIEELRELFGSIGIVARIKQKRGYKDQWPYSIKLYTDDSGKNKGDGVLSYEDPSAAHSARGFFNGYDIRGHKINVTM 419
BLAST of NO07G02850 vs. NCBI_GenBank
Match: CCA23378.1 (Mitochondrial Carrier (MC) Family putative [Albugo laibachii Nc14]) HSP 1 Score: 106.3 bits (264), Expect = 1.400e-19 Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0 Query: 58 IFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSMVSYGE 150 I+IS L T E+ E FG IGIV + KQKRG+ DQWP+KIKMY DE+GK KG+ VLTYE+ N+A + SFF+G+E+ GK +KV + E Sbjct: 169 IYISNLPDDVTIDELQEIFGAIGIVAREKQKRGFKDQWPFKIKMYTDEAGKFKGDAVLTYEDANAARTAPSFFNGSEIRGKAIKVELAGKPE 260
BLAST of NO07G02850 vs. NCBI_GenBank
Match: XP_021861063.1 (transcription initiation factor TFIID subunit 15b [Spinacia oleracea] >XP_021861064.1 transcription initiation factor TFIID subunit 15b [Spinacia oleracea] >XP_021861065.1 transcription initiation factor TFIID subunit 15b [Spinacia oleracea] >XP_021861066.1 transcription initiation factor TFIID subunit 15b [Spinacia oleracea] >KNA09554.1 hypothetical protein SOVF_152460 [Spinacia oleracea]) HSP 1 Score: 106.3 bits (264), Expect = 1.400e-19 Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 0 Query: 55 NGTIFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSM 145 N I+IS L P E+ E FG IG V ++KQKRGY DQWPY IK+Y D+SGK+KG+ VL+YE+P++AH++ FF+G ++ G + VSM Sbjct: 314 NSRIYISNLPPDVAVEELRELFGSIGTVARIKQKRGYKDQWPYSIKLYTDDSGKNKGDGVLSYEDPSAAHSAGGFFNGHDIRGYKINVSM 403
BLAST of NO07G02850 vs. NCBI_GenBank
Match: CCI42269.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19 Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = 0 Query: 58 IFISGLSPSTTEAEIAEYFGQIGIVKKMKQKRGYPDQWPYKIKMYRDESGKSKGECVLTYEEPNSAHASISFFHGTELAGKTLKVSMVSYGE 150 I+IS L T E+ E FG IGIV + KQKRG+ DQWP+KIK+Y DE+GK KG+ VLTYE+ N+A + SFF+G+E+ GK++KV + E Sbjct: 126 IYISNLPDDVTVDELQETFGAIGIVAREKQKRGFKDQWPFKIKLYTDETGKFKGDAVLTYEDANAARTAPSFFNGSEIRGKSIKVELAGKPE 217 The following BLAST results are available for this feature:
BLAST of NO07G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02850 ID=NO07G02850|Name=NO07G02850|organism=Nannochloropsis oceanica|type=gene|length=2607bpback to top protein sequence of NO07G02850.2 >NO07G02850.2-protein ID=NO07G02850.2-protein|Name=NO07G02850.2|organism=Nannochloropsis oceanica|type=polypeptide|length=255bpback to top protein sequence of NO07G02850.1 >NO07G02850.1-protein ID=NO07G02850.1-protein|Name=NO07G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=285bpback to top Synonyms
Publications
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