NO07G01710, NO07G01710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01710 vs. NCBI_GenBank
Match: GAX82977.1 (hypothetical protein CEUSTIGMA_g10404.t1 [Chlamydomonas eustigma]) HSP 1 Score: 135.2 bits (339), Expect = 1.100e-27 Identity = 132/437 (30.21%), Postives = 198/437 (45.31%), Query Frame = 0 Query: 42 MQS--LLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQD-----FLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRH---GTTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDARQ 469 MQS L E + + +KI+FER ++L G +P+LV +G+ P AK E R R + + ACSSS NT ++S+ V +LL+A+GLP+ QAVGE EA CA LN+ VD S D D+LL+GA AVYK L+L V + ++ + SG Q +A+ L G D+ G K VG A + +R L + + + +++ +L +L D L+A++ C+ C+NC H G + + H G CGT G GGC+ + + C C + +R L + RA + G +L+K + A+ Y TAT + + +D +W RP+ L DIL G+G + K +PLLLEWD RQ Sbjct: 1 MQSLQLAEAFKNGHAQCLKIIFERCCNWLRFGCMPLLVLDGISPQAKAE--TRALRALRRGAEEACSSSSHTRIPANT-YQSINKLVVQLLNAMGLPHVQAVGEAEATCAALNKLGFVDGCHSTDVDSLLFGATAVYKKLKLRVD--GSAAKDNEVEVIHMSGVRRQFGLQGGGQLALMAMAQLIGGDYNTGGAKGVGKCLAFDGIRAL---------------LAGSKDDSNILQVLAAALERGPDPRLMAMTA--CTGCKNCGHESAGRGKCKQHSRAGCGGCGT---LASKGGPGGCV-------------YRVFSLCECEFHRMEGQRLLTRMIDRATQTPG----FLQKCEVAQQTYLDQAATATES--------ISHLRRDVFR---SWSHRPNVSALCDILGKHL---GWGPSLVCSKTMPLLLEWDLRQ 381
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_002741315.1 (PREDICTED: flap endonuclease GEN homolog 1-like [Saccoglossus kowalevskii]) HSP 1 Score: 134.0 bits (336), Expect = 2.400e-27 Identity = 87/245 (35.51%), Postives = 126/245 (51.43%), Query Frame = 0 Query: 1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWLMQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRG--EWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRIL 244 MG+ LW L P + + ++G+ +A+D S W+ +S+ + K H++ +F RV++ + PV V +G PP K EL +R I S E K + T ++L + KLLD LG+PY QA GE EAMCALLN++ VD V + DGDA LYGA VYK+L G H + LD E L+++ +A+ LL GCD+L GV VG A +++ L Sbjct: 1 MGVKTLWVVL------EPVKDPTPLEDLKGQTIAVDLSSWICESI--AAVNAFKPHLRNLFYRVVNLSRLNIQPVFVIDGDPPELKSNELVKRAHI---QGDSKNKHGEKKPGMQRTRLKTLQYECCKLLDVLGVPYIQATGEAEAMCALLNKEGLVDGVFTEDGDAFLYGAKKVYKNLTAGSN---GSHVDVYDMLDIEEK----LTLNRNKLIAMALLMGCDYLSDGVPSVGKTNATQLMHSL 227
BLAST of NO07G01710 vs. NCBI_GenBank
Match: EGW02732.1 (Flap endonuclease GEN-like 1 [Cricetulus griseus]) HSP 1 Score: 133.3 bits (334), Expect = 4.100e-27 Identity = 81/249 (32.53%), Postives = 134/249 (53.82%), Query Frame = 0 Query: 1 MGIAGLWACLRE-EGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSG--ALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245 MG+ LW L + ++H +++ GK +A+D SLW+ Q++ + T K H++ +F R+ + + M V V EG PP K + + +R + +G S CS + + F+S+ + ++L+ LG+P+ QA GE EAMCA LN VD ++NDGDA LYGA VY++ ++ + +D +S + L + + L +L GCD+L KGV VG + A+++LRIL+ Sbjct: 1 MGVNDLWQILEPVKQHIH-------LQNLSGKTIAVDLSLWVCEAQTVKKMIGTVVKPHLRNLFFRISYLIQMNVKLVFVMEGEPPKLKADVISKRTQTRYGPSGKPCSQKTGR-----SHFKSVLRECLEMLECLGIPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQMVYRNFTMNT-------KDPHVDCYTASSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLRILK 230
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_003503092.1 (PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Cricetulus griseus] >XP_007637407.1 PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Cricetulus griseus] >XP_007637408.1 PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Cricetulus griseus]) HSP 1 Score: 133.3 bits (334), Expect = 4.100e-27 Identity = 81/249 (32.53%), Postives = 134/249 (53.82%), Query Frame = 0 Query: 1 MGIAGLWACLRE-EGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSG--ALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245 MG+ LW L + ++H +++ GK +A+D SLW+ Q++ + T K H++ +F R+ + + M V V EG PP K + + +R + +G S CS + + F+S+ + ++L+ LG+P+ QA GE EAMCA LN VD ++NDGDA LYGA VY++ ++ + +D +S + L + + L +L GCD+L KGV VG + A+++LRIL+ Sbjct: 1 MGVNDLWQILEPVKQHIH-------LQNLSGKTIAVDLSLWVCEAQTVKKMIGTVVKPHLRNLFFRISYLIQMNVKLVFVMEGEPPKLKADVISKRTQTRYGPSGKPCSQKTGR-----SHFKSVLRECLEMLECLGIPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQMVYRNFTMNT-------KDPHVDCYTASSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLRILK 230
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_015279255.1 (PREDICTED: flap endonuclease GEN homolog 1 [Gekko japonicus]) HSP 1 Score: 132.5 bits (332), Expect = 7.100e-27 Identity = 82/247 (33.20%), Postives = 130/247 (52.63%), Query Frame = 0 Query: 1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDREN--SSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRIL 244 MG+ LW L P + H++GK LA+D SLW+ QS+ + + K H++ +F RV +MG V V EG P K + + +R I +G S ++ + + F S + ++L+ LG+P+ QA GE EAMCA LN Q VD ++NDGDA LYGA VY++ +++ + +D + S +L + + + L +L GCD+L KGV VG + A++++R L Sbjct: 1 MGVTSLWQIL------EPIKQHVPLSHLKGKTLAVDLSLWVCEAQSVKKMAGVVTKPHLRNLFFRVSSLTLMGIRLVFVMEGDAPKLKADTMSKRSEIRFGHSIKPGAARTGR-----SHFRSFLKECLEMLECLGIPWVQAAGEAEAMCAYLNAQGYVDGCITNDGDAFLYGAQTVYRNFTMNI-------KDPHVDCYSIFSIEKMLGCNRECLIGLAILLGCDYLPKGVPGVGKEQALKLIRTL 229
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_005849037.1 (hypothetical protein CHLNCDRAFT_143468 [Chlorella variabilis] >EFN56935.1 hypothetical protein CHLNCDRAFT_143468 [Chlorella variabilis]) HSP 1 Score: 131.7 bits (330), Expect = 1.200e-26 Identity = 141/507 (27.81%), Postives = 212/507 (41.81%), Query Frame = 0 Query: 1 MGIAGLWACLREEGYVHPFEG------VELAKHVEGKVLAIDASLWLMQS----LLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSG-----ALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRHGTTRKEAHGAKGYEDC-----GTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRC---QRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVESEEKDTMTLP---YTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDARQIGGFLGQNWDGEG 482 MG+ LW L E V + G + + V+G +A+D S WLMQ+ L + ++ +K+ FER + +L G LPV+V EG PP K ++ R Y+ S + Q F+ L + +L+ LGLP A GE EA+CA L+ DA + DGDALLYGA ++ ++L G R L R + L ++ L +LSG D+ ++G + VG KG + + R L R E + +++ L + P L+AL+ +C+ C++C H A G + C G K GK C P + D + A C RC ++ ER ++ + +R LA EA+AA G A AAA VE + P W RP + D + + + KLLP+LLEWD +Q G G++ EG Sbjct: 1 MGVTALWQLLGAEQVVEHYRGASADELAHIVQAVDGAAVAVDLSPWLMQADQQQALLPHFSKEERCMKVAFERAVQWLRHGCLPVIVVEGRPPQEK--RAAQQARFASRNGYAGGGSQQGASQ-----FQRLGQTLGMMLEELGLPVFYAPGEAEAVCAALSAAGCCDACATPDGDALLYGAESLLHTVKLQT----GQPRECELRRVGMAAVRRRLGLRRGGTKALGVLAMLSGSDYDLEGAQGVGSKGGLAVARYLLRGGAAAGQGEP------QEDDSEVLERLAELVQRPPRHDLLALT--KCTGCQSCGH---EASASGRRPTLGCFSPGSGRAGKIKRHTGKNPCRCCTPAE-----DGGCQDAPCGPCRCAFHRQETERRVERILERVRRKPSFLA-------EAQAAVGVFERQAR-----EAAAYVEQRLGELGGAPGRKLHWLHRPRVRAVFDYIDARRRQMVWDLPAVRSKLLPVLLEWDLQQEGRGEGEHGPAEG 468
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_002710085.1 (PREDICTED: flap endonuclease GEN homolog 1 [Oryctolagus cuniculus]) HSP 1 Score: 131.0 bits (328), Expect = 2.100e-26 Identity = 82/249 (32.93%), Postives = 133/249 (53.41%), Query Frame = 0 Query: 1 MGIAGLWACLRE-EGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSG--ALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245 MG+ LW L + ++H +++ GK +A+D SLW+ Q++ + T K H++ +F R+ + + M V V EG PP K + + +R +I +G S S Q + F+ + + LLD LG+P+ QA GE EAMCA LN + VD ++NDGDA LYGA VY++ ++V + +D + S L + + L +L GCD+L KGV VG + A+++++IL+ Sbjct: 1 MGVNDLWQILEPVKQHIH-------LQNLGGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRISYLMQMDVKLVFVMEGEPPKLKADVISKRNQIRYGSSGKTLSQ-----QTGRSHFKLVLRECLDLLDCLGIPWVQAAGEAEAMCAYLNAEGYVDGCLTNDGDAFLYGAQTVYRNFTMNV-------KDPHVDCYSMSSIKVQLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILK 230
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_006096076.1 (LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1 [Myotis lucifugus]) HSP 1 Score: 130.6 bits (327), Expect = 2.700e-26 Identity = 80/247 (32.39%), Postives = 133/247 (53.85%), Query Frame = 0 Query: 1 MGIAGLWACLRE-EGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245 MG++ LW L + ++H ++ GK +A+D SLW+ Q++ + T K H++ +F R+ H +M V V EG PP K + + +R +I +G S S + + F+S+ + +LL+ LG+P+ QA GE EAMCA L+ VD ++NDGDA LYGA VY++ ++ + H + S+ L + + L +L GCD+L KGV VG + A+++++IL+ Sbjct: 1 MGVSDLWQILEPVKQHIH-------LNNLGGKTIAVDLSLWVCESQTVKKMIGTVTKPHLRNLFFRISHLTLMDVKLVFVMEGEPPKLKADVINKRNQIRYGPSAKTWSQKTGR-----SHFKSVLRECLELLECLGIPWVQAAGEAEAMCAYLDASGYVDGCLTNDGDAFLYGARTVYRNFTMNTK--DPHVDCYTMSSIKSN---LGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILK 230
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_006191445.1 (PREDICTED: flap endonuclease GEN homolog 1 [Camelus ferus]) HSP 1 Score: 130.6 bits (327), Expect = 2.700e-26 Identity = 80/245 (32.65%), Postives = 129/245 (52.65%), Query Frame = 0 Query: 1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRIL 244 MG+ LW L P + L + GK +A+D SLW+ Q++ + T K H++ +F R+ + +M V V EG PP K + + +R +I +G S CS + + F+S+ + +L+ LG+P+ QA GE EAMCA LN D ++NDGDA LYGA VY++ ++ + H + +S + L + + L +L GCD+L KGV VG + A+++++IL Sbjct: 1 MGVNDLWQIL------EPVKEHVLLHSLSGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGKPPKLKADVMSKRNQIRYGPSGKTCSQKTGR-----SHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYADGCLTNDGDAFLYGAQTVYRNFTMNTK---DPHVDCY--TMSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLIKIL 229
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_006197191.1 (PREDICTED: flap endonuclease GEN homolog 1 [Vicugna pacos]) HSP 1 Score: 130.6 bits (327), Expect = 2.700e-26 Identity = 80/245 (32.65%), Postives = 129/245 (52.65%), Query Frame = 0 Query: 1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRIL 244 MG+ LW L P + L + GK +A+D SLW+ Q++ + T K H++ +F R+ + +M V V EG PP K + + +R +I +G S CS + + F+S+ + +L+ LG+P+ QA GE EAMCA LN D ++NDGDA LYGA VY++ ++ + H + +S + L + + L +L GCD+L KGV VG + A+++++IL Sbjct: 1 MGVNDLWQIL------EPVKEHVLLHSLSGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGKPPKLKADVMSKRNQIRYGPSGKTCSQKTGR-----SHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYTDGCLTNDGDAFLYGAQTVYRNFTMNTK---DPHVDCY--TMSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLIKIL 229 The following BLAST results are available for this feature:
BLAST of NO07G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01710 ID=NO07G01710|Name=NO07G01710|organism=Nannochloropsis oceanica|type=gene|length=2907bpback to top protein sequence of NO07G01710.1 >NO07G01710.1-protein ID=NO07G01710.1-protein|Name=NO07G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=969bpback to top Synonyms
Publications
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