NO07G01710, NO07G01710 (gene) Nannochloropsis oceanica

Overview
NameNO07G01710
Unique NameNO07G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2907
Alignment locationchr7:514486..517392 -

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Properties
Property NameValue
DescriptionFlap endonuclease 1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:514486..517392 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003677DNA binding
GO:0004518nuclease activity
GO:0004519endonuclease activity
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0090305nucleic acid phosphodiester bond hydrolysis
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN_domain-like
IPR006085XPG_DNA_repair_N
IPR008918HhH2
IPR006086XPG-I_dom
IPR006084XPG/Rad2
Homology
BLAST of NO07G01710 vs. NCBI_GenBank
Match: GAX82977.1 (hypothetical protein CEUSTIGMA_g10404.t1 [Chlamydomonas eustigma])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-27
Identity = 132/437 (30.21%), Postives = 198/437 (45.31%), Query Frame = 0
Query:   42 MQS--LLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQD-----FLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRH---GTTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDARQ 469
            MQS  L E     + + +KI+FER  ++L  G +P+LV +G+ P AK E   R  R +   +  ACSSS       NT ++S+   V +LL+A+GLP+ QAVGE EA CA LN+   VD   S D D+LL+GA AVYK L+L V       +   ++  + SG       Q       +A+  L G D+   G K VG   A + +R L                +  + + +++ +L  +L    D  L+A++   C+ C+NC H   G  + + H   G   CGT        G GGC+              +  + C C   +   +R L  +  RA +  G    +L+K + A+  Y     TAT +        +    +D      +W  RP+   L DIL       G+G   +  K +PLLLEWD RQ
Sbjct:    1 MQSLQLAEAFKNGHAQCLKIIFERCCNWLRFGCMPLLVLDGISPQAKAE--TRALRALRRGAEEACSSSSHTRIPANT-YQSINKLVVQLLNAMGLPHVQAVGEAEATCAALNKLGFVDGCHSTDVDSLLFGATAVYKKLKLRVD--GSAAKDNEVEVIHMSGVRRQFGLQGGGQLALMAMAQLIGGDYNTGGAKGVGKCLAFDGIRAL---------------LAGSKDDSNILQVLAAALERGPDPRLMAMTA--CTGCKNCGHESAGRGKCKQHSRAGCGGCGT---LASKGGPGGCV-------------YRVFSLCECEFHRMEGQRLLTRMIDRATQTPG----FLQKCEVAQQTYLDQAATATES--------ISHLRRDVFR---SWSHRPNVSALCDILGKHL---GWGPSLVCSKTMPLLLEWDLRQ 381          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_002741315.1 (PREDICTED: flap endonuclease GEN homolog 1-like [Saccoglossus kowalevskii])

HSP 1 Score: 134.0 bits (336), Expect = 2.400e-27
Identity = 87/245 (35.51%), Postives = 126/245 (51.43%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWLMQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRG--EWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRIL 244
            MG+  LW  L       P +     + ++G+ +A+D S W+ +S+   +    K H++ +F RV++   +   PV V +G PP  K  EL +R  I      S     E K   + T  ++L  +  KLLD LG+PY QA GE EAMCALLN++  VD V + DGDA LYGA  VYK+L        G H    + LD E      L+++    +A+ LL GCD+L  GV  VG   A +++  L
Sbjct:    1 MGVKTLWVVL------EPVKDPTPLEDLKGQTIAVDLSSWICESI--AAVNAFKPHLRNLFYRVVNLSRLNIQPVFVIDGDPPELKSNELVKRAHI---QGDSKNKHGEKKPGMQRTRLKTLQYECCKLLDVLGVPYIQATGEAEAMCALLNKEGLVDGVFTEDGDAFLYGAKKVYKNLTAGSN---GSHVDVYDMLDIEEK----LTLNRNKLIAMALLMGCDYLSDGVPSVGKTNATQLMHSL 227          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: EGW02732.1 (Flap endonuclease GEN-like 1 [Cricetulus griseus])

HSP 1 Score: 133.3 bits (334), Expect = 4.100e-27
Identity = 81/249 (32.53%), Postives = 134/249 (53.82%), Query Frame = 0
Query:    1 MGIAGLWACLRE-EGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSG--ALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245
            MG+  LW  L   + ++H        +++ GK +A+D SLW+   Q++ +   T  K H++ +F R+ + + M    V V EG PP  K + + +R +  +G S   CS    +     + F+S+  +  ++L+ LG+P+ QA GE EAMCA LN    VD  ++NDGDA LYGA  VY++  ++        +   +D   +S   + L +     + L +L GCD+L KGV  VG + A+++LRIL+
Sbjct:    1 MGVNDLWQILEPVKQHIH-------LQNLSGKTIAVDLSLWVCEAQTVKKMIGTVVKPHLRNLFFRISYLIQMNVKLVFVMEGEPPKLKADVISKRTQTRYGPSGKPCSQKTGR-----SHFKSVLRECLEMLECLGIPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQMVYRNFTMNT-------KDPHVDCYTASSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLRILK 230          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_003503092.1 (PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Cricetulus griseus] >XP_007637407.1 PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Cricetulus griseus] >XP_007637408.1 PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Cricetulus griseus])

HSP 1 Score: 133.3 bits (334), Expect = 4.100e-27
Identity = 81/249 (32.53%), Postives = 134/249 (53.82%), Query Frame = 0
Query:    1 MGIAGLWACLRE-EGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSG--ALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245
            MG+  LW  L   + ++H        +++ GK +A+D SLW+   Q++ +   T  K H++ +F R+ + + M    V V EG PP  K + + +R +  +G S   CS    +     + F+S+  +  ++L+ LG+P+ QA GE EAMCA LN    VD  ++NDGDA LYGA  VY++  ++        +   +D   +S   + L +     + L +L GCD+L KGV  VG + A+++LRIL+
Sbjct:    1 MGVNDLWQILEPVKQHIH-------LQNLSGKTIAVDLSLWVCEAQTVKKMIGTVVKPHLRNLFFRISYLIQMNVKLVFVMEGEPPKLKADVISKRTQTRYGPSGKPCSQKTGR-----SHFKSVLRECLEMLECLGIPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQMVYRNFTMNT-------KDPHVDCYTASSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLRILK 230          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_015279255.1 (PREDICTED: flap endonuclease GEN homolog 1 [Gekko japonicus])

HSP 1 Score: 132.5 bits (332), Expect = 7.100e-27
Identity = 82/247 (33.20%), Postives = 130/247 (52.63%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDREN--SSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRIL 244
            MG+  LW  L       P +      H++GK LA+D SLW+   QS+ + +    K H++ +F RV    +MG   V V EG  P  K + + +R  I +G S    ++   +     + F S   +  ++L+ LG+P+ QA GE EAMCA LN Q  VD  ++NDGDA LYGA  VY++  +++       +   +D  +  S   +L  + +  + L +L GCD+L KGV  VG + A++++R L
Sbjct:    1 MGVTSLWQIL------EPIKQHVPLSHLKGKTLAVDLSLWVCEAQSVKKMAGVVTKPHLRNLFFRVSSLTLMGIRLVFVMEGDAPKLKADTMSKRSEIRFGHSIKPGAARTGR-----SHFRSFLKECLEMLECLGIPWVQAAGEAEAMCAYLNAQGYVDGCITNDGDAFLYGAQTVYRNFTMNI-------KDPHVDCYSIFSIEKMLGCNRECLIGLAILLGCDYLPKGVPGVGKEQALKLIRTL 229          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_005849037.1 (hypothetical protein CHLNCDRAFT_143468 [Chlorella variabilis] >EFN56935.1 hypothetical protein CHLNCDRAFT_143468 [Chlorella variabilis])

HSP 1 Score: 131.7 bits (330), Expect = 1.200e-26
Identity = 141/507 (27.81%), Postives = 212/507 (41.81%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEG------VELAKHVEGKVLAIDASLWLMQS----LLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSG-----ALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRHGTTRKEAHGAKGYEDC-----GTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRC---QRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVESEEKDTMTLP---YTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDARQIGGFLGQNWDGEG 482
            MG+  LW  L  E  V  + G        + + V+G  +A+D S WLMQ+     L    +  ++ +K+ FER + +L  G LPV+V EG PP  K     ++ R      Y+   S +   Q     F+ L   +  +L+ LGLP   A GE EA+CA L+     DA  + DGDALLYGA ++   ++L      G  R   L R   +       L    ++    L +LSG D+ ++G + VG KG + + R L R                 E +  +++ L   +  P    L+AL+  +C+ C++C H      A G +    C     G   K     GK  C    P +     D   + A C   RC   ++  ER ++ + +R       LA       EA+AA G     A       AAA VE    +    P     W  RP    + D +        +    +  KLLP+LLEWD +Q G   G++   EG
Sbjct:    1 MGVTALWQLLGAEQVVEHYRGASADELAHIVQAVDGAAVAVDLSPWLMQADQQQALLPHFSKEERCMKVAFERAVQWLRHGCLPVIVVEGRPPQEK--RAAQQARFASRNGYAGGGSQQGASQ-----FQRLGQTLGMMLEELGLPVFYAPGEAEAVCAALSAAGCCDACATPDGDALLYGAESLLHTVKLQT----GQPRECELRRVGMAAVRRRLGLRRGGTKALGVLAMLSGSDYDLEGAQGVGSKGGLAVARYLLRGGAAAGQGEP------QEDDSEVLERLAELVQRPPRHDLLALT--KCTGCQSCGH---EASASGRRPTLGCFSPGSGRAGKIKRHTGKNPCRCCTPAE-----DGGCQDAPCGPCRCAFHRQETERRVERILERVRRKPSFLA-------EAQAAVGVFERQAR-----EAAAYVEQRLGELGGAPGRKLHWLHRPRVRAVFDYIDARRRQMVWDLPAVRSKLLPVLLEWDLQQEGRGEGEHGPAEG 468          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_002710085.1 (PREDICTED: flap endonuclease GEN homolog 1 [Oryctolagus cuniculus])

HSP 1 Score: 131.0 bits (328), Expect = 2.100e-26
Identity = 82/249 (32.93%), Postives = 133/249 (53.41%), Query Frame = 0
Query:    1 MGIAGLWACLRE-EGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSG--ALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245
            MG+  LW  L   + ++H        +++ GK +A+D SLW+   Q++ +   T  K H++ +F R+ + + M    V V EG PP  K + + +R +I +G S    S      Q   + F+ +  +   LLD LG+P+ QA GE EAMCA LN +  VD  ++NDGDA LYGA  VY++  ++V       +   +D  + S     L +     + L +L GCD+L KGV  VG + A+++++IL+
Sbjct:    1 MGVNDLWQILEPVKQHIH-------LQNLGGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRISYLMQMDVKLVFVMEGEPPKLKADVISKRNQIRYGSSGKTLSQ-----QTGRSHFKLVLRECLDLLDCLGIPWVQAAGEAEAMCAYLNAEGYVDGCLTNDGDAFLYGAQTVYRNFTMNV-------KDPHVDCYSMSSIKVQLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILK 230          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_006096076.1 (LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1 [Myotis lucifugus])

HSP 1 Score: 130.6 bits (327), Expect = 2.700e-26
Identity = 80/247 (32.39%), Postives = 133/247 (53.85%), Query Frame = 0
Query:    1 MGIAGLWACLRE-EGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245
            MG++ LW  L   + ++H         ++ GK +A+D SLW+   Q++ +   T  K H++ +F R+ H  +M    V V EG PP  K + + +R +I +G S    S    +     + F+S+  +  +LL+ LG+P+ QA GE EAMCA L+    VD  ++NDGDA LYGA  VY++  ++ +    H     +    S+   L +     + L +L GCD+L KGV  VG + A+++++IL+
Sbjct:    1 MGVSDLWQILEPVKQHIH-------LNNLGGKTIAVDLSLWVCESQTVKKMIGTVTKPHLRNLFFRISHLTLMDVKLVFVMEGEPPKLKADVINKRNQIRYGPSAKTWSQKTGR-----SHFKSVLRECLELLECLGIPWVQAAGEAEAMCAYLDASGYVDGCLTNDGDAFLYGARTVYRNFTMNTK--DPHVDCYTMSSIKSN---LGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILK 230          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_006191445.1 (PREDICTED: flap endonuclease GEN homolog 1 [Camelus ferus])

HSP 1 Score: 130.6 bits (327), Expect = 2.700e-26
Identity = 80/245 (32.65%), Postives = 129/245 (52.65%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRIL 244
            MG+  LW  L       P +   L   + GK +A+D SLW+   Q++ +   T  K H++ +F R+ +  +M    V V EG PP  K + + +R +I +G S   CS    +     + F+S+  +   +L+ LG+P+ QA GE EAMCA LN     D  ++NDGDA LYGA  VY++  ++ +     H   +    +S  + L +     + L +L GCD+L KGV  VG + A+++++IL
Sbjct:    1 MGVNDLWQIL------EPVKEHVLLHSLSGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGKPPKLKADVMSKRNQIRYGPSGKTCSQKTGR-----SHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYADGCLTNDGDAFLYGAQTVYRNFTMNTK---DPHVDCY--TMSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLIKIL 229          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_006197191.1 (PREDICTED: flap endonuclease GEN homolog 1 [Vicugna pacos])

HSP 1 Score: 130.6 bits (327), Expect = 2.700e-26
Identity = 80/245 (32.65%), Postives = 129/245 (52.65%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRIL 244
            MG+  LW  L       P +   L   + GK +A+D SLW+   Q++ +   T  K H++ +F R+ +  +M    V V EG PP  K + + +R +I +G S   CS    +     + F+S+  +   +L+ LG+P+ QA GE EAMCA LN     D  ++NDGDA LYGA  VY++  ++ +     H   +    +S  + L +     + L +L GCD+L KGV  VG + A+++++IL
Sbjct:    1 MGVNDLWQIL------EPVKEHVLLHSLSGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRISYLTLMDVKLVFVMEGKPPKLKADVMSKRNQIRYGPSGKTCSQKTGR-----SHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYTDGCLTNDGDAFLYGAQTVYRNFTMNTK---DPHVDCY--TMSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLIKIL 229          
The following BLAST results are available for this feature:
BLAST of NO07G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX82977.11.100e-2730.21hypothetical protein CEUSTIGMA_g10404.t1 [Chlamydo... [more]
XP_002741315.12.400e-2735.51PREDICTED: flap endonuclease GEN homolog 1-like [S... [more]
EGW02732.14.100e-2732.53Flap endonuclease GEN-like 1 [Cricetulus griseus][more]
XP_003503092.14.100e-2732.53PREDICTED: flap endonuclease GEN homolog 1 isoform... [more]
XP_015279255.17.100e-2733.20PREDICTED: flap endonuclease GEN homolog 1 [Gekko ... [more]
XP_005849037.11.200e-2627.81hypothetical protein CHLNCDRAFT_143468 [Chlorella ... [more]
XP_002710085.12.100e-2632.93PREDICTED: flap endonuclease GEN homolog 1 [Orycto... [more]
XP_006096076.12.700e-2632.39LOW QUALITY PROTEIN: flap endonuclease GEN homolog... [more]
XP_006191445.12.700e-2632.65PREDICTED: flap endonuclease GEN homolog 1 [Camelu... [more]
XP_006197191.12.700e-2632.65PREDICTED: flap endonuclease GEN homolog 1 [Vicugn... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000698NSK000698Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01710.1NO07G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669090gene_2494Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g27gene3348Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01710.1NO07G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01710 ID=NO07G01710|Name=NO07G01710|organism=Nannochloropsis oceanica|type=gene|length=2907bp
ATGGGAATCGCAGGACTGTGGGCTTGCCTTCGGGAGGAGGGGTATGTGCA
TCCCTTTGAGGGCGTGGAATTGGCAAAGCACGTGGAGGGCAAGGTACTAG
CCATTGATGCCTCGTTATGGCTGATGCAGAGCCTGTTAGAGGGCAGTCAC
ACTCATAACAAGAAGCACATCAAGATTGTCTTTGAACGCGTCATCCATTT
CTTAATGATGGGGGCGCTACCTGTCCTGGTCTTCGAGGGCATGCCACCCC
CGGCCAAGCTGGAAGAGTTGGAGCGCCGGCGCAGGATCATGTGGGGCATG
TCCTACTCTGCCTGCTCGTCTAGCGAATCAAAGGTGCAACGCAAGAATAC
TGCATTTGAATCCCTTGCCACAGATGTCAAGAAGCTGTTGGATGCCTTGG
GATTGCCTTATGAGCAGGCTGTGGGGGAGGGAGAGGCAATGTGTGCGCTG
TTGAACCGACAGCATAGAGTGGATGCTGTTGTATCGAATGACGGCGATGC
ATTGCTGTATGGAGCGCATGCAGTCTATAAGGATCTGAGGTTGCATGTCC
GGTTCTTACCGGGGCATCATCGTGGAGAGTGGTTGGACCGAGAGAACTCG
TCGGGAGCGTTGCTATCCATGTCATCGCAAGACTTTTTGGCGCTATGCCT
TCTGTCTGGGTGTGACTTCCTGATAAAGGGCGTCAAAAAAGTAGGGTTCA
AAGGTGCCATGGAAATTCTTCGAATTCTCCAACGCCGACGTGCCAAGCAA
GAACAGCAACAGCGCCTATCCAGCAGCTCGCTGCACGAGATCGAAGTGAG
CCTCATAGATCTCCTCCGAACAAGCTTAACCGAGCCCGTAGACGAGGCCT
TAGTTGCCTTAAGCGGAGGGCAATGCTCCACCTGTCGAAATTGCCGACAC
GGCACAACCCGAAAGGAAGCACACGGCGCAAAGGGCTATGAGGACTGTGG
TACGCACCCAAAGACTCTGGGGGGGGATGGGAAAGGTGGTTGCATGCCGG
CCGCACCAGAGAAAGTCCAAAGGAAGGTGGACGAGGAGCAAGAGGGTGCA
TCTTGTCCTTGTGTGCGCTGCCAACGAAGGGATGAACGGACGCTGCAACT
CTTGGCGAAGCGGGCGGCGGAGGGGGAGGGGGGCTTGGCCAGGTACTTGC
GGAAGTTTGATGAAGCACGCGCTGCTTATGGGTCGGCAGGCGTTACGGCA
ACAGTAACACCACCACTAGCAGCAGCAGCAGTAGTAGAGAGTGAGGAAAA
GGACACGATGACGCTACCGTATACGTGGCATTCCCGGCCTGATTTTGACC
GTTTGAAGGACATCCTTAAACCTGTCTACGGAGCAGGAGGTTTTGGACGT
AAGAATCTCGCGCGGAAGCTCTTGCCTCTCTTACTAGAGTGGGACGCGCG
ACAGATAGGAGGCTTTCTGGGACAGAATTGGGATGGAGAGGGCGCAAGGG
AGGCCAATAAAGCGGGCTTGGCGTCTGCTGCAAAGCACGGATTTTTATTC
GCCCCGGTAAGAATCGAGCGGGTGTGTTTGATTGGTGCTAACGCTGCTAC
TGCTGCTGAGGGAAGGGGAGGAGGAGGAGGAGGAGAAGGAGGAAGGGGAG
GAGGAGGAGAAGGAGAAGGAACAGGAGGCACATGGCGGTATAGCATGGAA
TGGACTGCGCTGTGTCCTCAGGCGGAGGCAATGGTGGCTGAGGCGGCGCA
AGGTATGCGCGGGGAAGGTAAGGGTACGTCTGGGAAGAGTGGCGAGAGAG
GGGGGATGGGCGAGGGGGCTTTACCGACTTTGAAGGATGTTCTAAGCGAG
GGCCGGGGCTGCTTGCGTCAGACTTTGGTCCGAGCGCAATTCCCTGGTTT
GGTTCGCATGTTTGAGGAGGAGCAACAGCGGAAGCTCGCCACGCCCTCCC
GTCCCAAGAAGAAGGGAGTGAGGGGAAGAGCCACTGCGGCAGCAGCACCA
GTGCGGGCGAATATTTGCGCGGCTAATACCCTCGATCGTTATTTCTCTCT
GGAGGGAAAAAAGAATGCATCGCTCTCCCCGTTTCCATCGCCGCCAAGGT
CGCAAGACCAGCAACTGGAGCAGGAGCAACGGCAGGTCCAGCAGCATCAG
CCACAGCAGAATAGTCCCTTTGAGAATCACATTTCTCCAGCCGCTGACCC
TTTTTTGTCGACCGCCTCCCCTTCTTTTGCCTCCTCCTACCCGCTCTCAT
CTATCGATGAAAGGGTGGCAGAGCCCGCAGTCTTGGAACGCACTCCCATC
GCCCCCATTCCTTCCTTCTCCTTCTCCCCTTCAAAATCCCATTCTTCCTC
GTCATTGGTCCGTTGTCCGCCTGCTCCTCGGAAAGGCAAGCGTCCTGGAG
GTCCTCGGGTGGGAGAGGGAGTAGATGCCCCTGGCCGAGCAAGTGGGAGG
AGGAATTTAGATAGATATTTTAAGCGTGTGCGGGGTGATGGCACTGCGCG
GGAGAGAGAGTCCTTGAATTCAATTGCTAGAAGGGTGACGTCGGGTATGG
AGGGAGAGGGAGGAGGGGAAGAAGGAACCAAAAGTCAGGAACAGGGCAAT
GTGACGGAGGGCAGCACTTCCGACAGCAGCAGCTTTAGCAGGCAGGATAA
AGATAAAAATGACGGCGAGGATTTAGGTGGTGGGGGGAATGAAGCGAGGA
GAGTGGAGGAGGAGGAGAAGGAGGAATTGTCCGTAATAGACCTGACAGAT
GTACCTTACATTTACTCACCGGCCGTGGCTGTGCAGCAGCAGCGACAGCA
ACAGCTGCAGCAGCAGCAGCAACACCACCATCGCGTGTCATCAGATGATG
ACGATGAGAACGGGGACGGAGAGGAGGAGGACGAGGTGATTTCGTCGCCT
GAGGTGGAGCGGGTACAACGTGCAGTGGCATGCGTGGACTTGGTTACTCC
ACCTTGA
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protein sequence of NO07G01710.1

>NO07G01710.1-protein ID=NO07G01710.1-protein|Name=NO07G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=969bp
MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWLMQSLLEGSH
THNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGM
SYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCAL
LNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENS
SGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRRRAKQ
EQQQRLSSSSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRH
GTTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGA
SCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTA
TVTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGR
KNLARKLLPLLLEWDARQIGGFLGQNWDGEGAREANKAGLASAAKHGFLF
APVRIERVCLIGANAATAAEGRGGGGGGEGGRGGGGEGEGTGGTWRYSME
WTALCPQAEAMVAEAAQGMRGEGKGTSGKSGERGGMGEGALPTLKDVLSE
GRGCLRQTLVRAQFPGLVRMFEEEQQRKLATPSRPKKKGVRGRATAAAAP
VRANICAANTLDRYFSLEGKKNASLSPFPSPPRSQDQQLEQEQRQVQQHQ
PQQNSPFENHISPAADPFLSTASPSFASSYPLSSIDERVAEPAVLERTPI
APIPSFSFSPSKSHSSSSLVRCPPAPRKGKRPGGPRVGEGVDAPGRASGR
RNLDRYFKRVRGDGTARERESLNSIARRVTSGMEGEGGGEEGTKSQEQGN
VTEGSTSDSSSFSRQDKDKNDGEDLGGGGNEARRVEEEEKEELSVIDLTD
VPYIYSPAVAVQQQRQQQLQQQQQHHHRVSSDDDDENGDGEEEDEVISSP
EVERVQRAVACVDLVTPP*
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Synonyms
Publications