NO07G01710, NO07G01710 (gene) Nannochloropsis oceanica

Overview
NameNO07G01710
Unique NameNO07G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2907
Alignment locationchr7:514486..517392 -

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Properties
Property NameValue
DescriptionFlap endonuclease 1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:514486..517392 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003677DNA binding
GO:0004518nuclease activity
GO:0004519endonuclease activity
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0090305nucleic acid phosphodiester bond hydrolysis
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN_domain-like
IPR006085XPG_DNA_repair_N
IPR008918HhH2
IPR006086XPG-I_dom
IPR006084XPG/Rad2
Homology
BLAST of NO07G01710 vs. NCBI_GenBank
Match: EWM27203.1 (flap endonuclease 1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 535.0 bits (1377), Expect = 4.700e-148
Identity = 349/826 (42.25%), Postives = 447/826 (54.12%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWLMQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMW-GMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRHGTTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEG-------ASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAG-----VTATVTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDARQIGGFLGQNWDGEGAREANKAGLASAAKHGFLFAPVRIERVCLIGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTWRYSMEWTALCPQAEAMVXXXXXXXXXXXXXXXXXXXXXXXXXEGALPTLKDVLSEGRGCLRQTLVRAQFPGLVRMFEEEQQRKLATPSRPKKKGVRGRATAAAAPVRANICAANTLDRYFSLEGKKNASLSPFPSPPRSQDXXXXXXXXXXXXXXXXXXXXXXXHISPAADPFLSTASPSFASSYPLSSIDERVAEPAVLERTPIAPIPSFSFSPSKSHSSSSLVRCPPAPRKGKRPGGPRVGEGVDAPGRASGRRNLDRYFKRVRGD 814
            MGI+GLW  LR++G+V   +GVELA+HVE KVLA+DASLWLMQ   E ++ H+KKHIK+VFERVIH+L +GALPVLVFEG  PPAK  ++ERRR+ MW GMS    S S+  V R N +   L  DVKKLLDA+GLPYEQA GEGEA+CA++  Q  VD+VVS+DGDALLYGA  +YKDLRLH R LP +H GEW+  EN  G  +S+S QD +A+CLL+GCDFL +G+++VG  GA  ++R L+               ++     SL+DLLR+ L+E VDE + A + G C TCR+  H    K+  G KG + CG  PK  GG G+GGC      + Q + D    G       + C C+ CQRRD+ TLQLLAKRA +G+GGL  YLRKFDEA AAY +A      +T ++      A   +          + W  RPD   LK++L+PVYG GG G +NLARKLLPLLLEWDAR IG  LG    G  A+E     LA A   G+LFAP+RI+RVC IG                                WRY+M+W AL P+AE+++                            LP+LK+VLSEGRG LR++LV A++P LVR FE+  QR    PSRP+K+  +GR   A+      I     L+ +FS      A+L P  SP +                           +  +  P                  +  V+          AP P+       SHS       P APRKGK P     G      G  S RRNLD +FKR R D
Sbjct:    1 MGISGLWNFLRDQGHVRNLDGVELARHVENKVLAVDASLWLMQCRKESTYLHDKKHIKVVFERVIHYLRLGALPVLVFEGYTPPAKQTKMERRRKTMWKGMS----SPSQPYVPRCNHSLMQLGEDVKKLLDAMGLPYEQAGGEGEALCAVMYCQGLVDSVVSSDGDALLYGARRLYKDLRLHARLLPDNHSGEWVALENDDG--VSISGQDLMAVCLLAGCDFLSEGLRQVGCIGAWGVVRALKARRARILQQGEGSAANIALGSRSLVDLLRSCLSEAVDEPMTAPAAGACVTCRSHPHVEAGKKVRGTKGCQKCGMLPKVRGGVGEGGC-----NRGQTQADAVGVGGVFVGNDSPCLCMSCQRRDDGTLQLLAKRARDGQGGLQGYLRKFDEAHAAYKAASDAAMDLTRSLRSAGDEATGTDGSAPGKCPAHFEWRRRPDVALLKEMLEPVYGKGGMGGRNLARKLLPLLLEWDARHIGDVLG---PGPDAQEVGARELALATHQGYLFAPIRIDRVCQIGGGG-----------------------------WRYAMDWVALRPEAESLIAEAAEGMQRAAGSQWTSQGGGK-----MLPSLKEVLSEGRGSLRRSLVEAKYPYLVRAFEQRCQR--VRPSRPRKE--QGRDALASV-----IRPEGRLEHFFS---PLKAALIPPSSPSQPPG------------------------VQSSESPXXXXXXXXXXXXXXXXXXESPVS----------APSPTVRLGTRSSHSCC----VPRAPRKGKPPDLLDKGIERQGLGGRSARRNLDHFFKRARFD 728          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_013904313.1 (putative Flap endonuclease GEN [Monoraphidium neglectum] >KIZ05294.1 putative Flap endonuclease GEN [Monoraphidium neglectum])

HSP 1 Score: 151.8 bits (382), Expect = 1.100e-32
Identity = 148/504 (29.37%), Postives = 212/504 (42.06%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKH------VEGKVLAIDASLWLMQSLLEGSHTHNKKH-----IKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGA-----LLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVD---EALVALSGGQCST------------CRNCRHGTTRKEA---HGAKGYEDCGTHPKTLGGDGKGGCMP--AAP-EKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDAR 468
            MG+  LW  L + G V   +G + A+H      +EG  +A+D S WL+Q+  + +   N        +K+VF+R IH+L  G LP+ V EG  P AKLE+L R+R I    +Y   +          + F SL   V +LLD LG+P+ QA GEGEA CA LN         + D DALL+GA  VY+ L L       + R   + R   +       L    +Q  +A+  L+G D+ + G  +VG   A+  +R L +                 + +  +++LL+ +L    D   ++L   +GG+ +             C+ C H   RK A   HG +G  +CG    T G DG GGC+P  A P                C C      DER L  + +RA    G    +L     A   Y S    A     +AA        +      +TW  RPD                     +  KLLPLLLEWD R
Sbjct:    1 MGVKHLWRTLEKGGAVELLDGGDAAQHCEILDELEGAAVAVDLSAWLVQAQTQPALAQNYDSDFACALKVVFDRTIHWLRHGCLPLFVIEGNTPEAKLEKL-RQRCI---ATYGPGAGQRRVGNNAGSRFSSLGRKVAELLDCLGVPWVQAEGEGEATCAALNMCGWAQGCYTADVDALLFGAVTVYRTLSLST----ANPRQTQMARCRRAAVQRVLRLQQGGTQALIAVAQLAGGDYDVAGADRVGDVLAVAAVRCLLKD---------------RQSDADVLELLQQALARGADPHLDSLTKCTGGRMTARGGTPASGVAQGCKCCGHEGGRKNAIKKHGKEGCAECG----TAGPDGGGGCIPIEARPXXXXXXXXXXXXXXXXCGCEFHCTSDERLLNRVVRRAVATNG----FLESCRVAARTYASEARQA-----VAAVQRAYGLARPGGANVFTWRRRPD---------------------VRLKLLPLLLEWDIR 447          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: PRW33965.1 (flap endonuclease GEN-like protein 1 [Chlorella sorokiniana])

HSP 1 Score: 148.7 bits (374), Expect = 9.500e-32
Identity = 151/514 (29.38%), Postives = 219/514 (42.61%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKH------VEGKVLAIDASLWLMQS----LLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALC---LLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRH--GTTRK-EAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTAT--VTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDARQIGGFLGQNWDGEGAREANKAGLASAAKH 497
            MG+  LW  LR EG V  + G   A H      V+G  +A+D S W+MQ+     L    +  ++ +KI FER + +L  G LPV+V EG  P  K    E++RR      Y+   S     QR N+ F+ L   V  LL+ LG+P   A GE EA+CA L+R   VD   SND D L+YGA AVY  L+L    LP     + + R +S    L + S    ALC   +LSG D+ + G   VG  G + + R L +                   +  +++ L  ++ +P ++ L+ L   QC+ C+ C H  G   K + H ++    C    +T      G C   A E+             C C   +   ER  + + +R  +  G    +L +   A A +   GV A   V   LA       E          W  RP    + D+L        +   ++  KLLP+LLEWD +Q  G      DG G  E   A +     H
Sbjct:    1 MGVNALWQLLRAEGLVEHYAGAAPADHAAIVEAVDGAAIAVDLSTWIMQADQQQALLPHFSKEERCMKIAFERALQWLRHGCLPVIVVEGEAPEEK--RAEQQRRFASRNGYAGGGS-----QRGNSQFQRLGRTVGGLLERLGVPVFYAPGEAEAVCAALSRAGCVDGCGSNDSDCLVYGAEAVYHTLKLST-ILPRECEMKRV-RLSSIRRRLELQSGGARALCVLGVLSGSDYDLDGAAGVGSAGGLALARHLLQGDTD---------------DSRVLERLAEAVQQPTNQHLLDLK--QCTGCQACGHEGGKAGKIKRHSSRNVCPCCPPTET------GHCRDHAFER-------------CQCAFHRLETERRAERILERVRKSPG----FLEEAQAAIAVFERQGVEADAYVRRRLAELGGRTGER-------LRWLRRPSVQGVFDVLDSKRRQLLWSLADVRSKLLPVLLEWDLKQ-QGLRQAGEDGAGEVEFQAAEIQKVHGH 457          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_003057829.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH57780.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 145.6 bits (366), Expect = 8.100e-31
Identity = 138/490 (28.16%), Postives = 199/490 (40.61%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVE---------LAKHVEGKVLAIDASLWLMQSLLEGS----HTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGE-----WL-DRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRH---GTTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYG-SAGVTATVTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDAR 468
            M +  LW+ L + G V   +  +         +   VEGKVLA+D + W+ Q+  + +     T   +  K+VFER  ++L  G +P+ V +G+PPP KL  +++R     GM  + C             F  L     + L ALGLP  +A GE EA CA +N    VD   ++DGDALL+GA   +K ++L     P   R E     WL +     G      S   +AL LL+G D+   G K+VG   A  +++ L                 L     +L   L   L  P D+ L A+    C+ C  C+H   G  +K+ H   G E CGT         + GC+             E++G  C C      D R +  + +RA   EG +      F  A  AY   A + A   P                     W  RPD   + +IL           +    KLLP+LLEWD R
Sbjct:    1 MTVTNLWSLLNDHGVVEVIDASDASDENAHPSIRDRVEGKVLAVDLAEWIFQATSQPATAELFTPEGQVAKVVFERAANWLRHGCIPIGVIDGVPPPEKLARMKQRH----GMGATGCGGG---------VFGRLGDVAARTLRALGLPAVEAPGEAEATCAAMNAAGLVDGCATSDGDALLFGARVQFKTIKLFAD-APEQSRIERCEASWLRETMRLPGDEHEGVSDALVALALLAGGDYDPDGAKRVGSALASRVVKGL--AAEDARERRKSGSPGLRPSTTTLPRRLDAFLEAPADDDLEAIGKRGCTGCVRCKHEGGGKCKKQRH-VHGCEACGT---------ESGCV-------------ERDG-PCECAFHSTEDLRWMDKVRRRAKATEGYVG---GSFQRAAKAYAKQASIAAAALPRARDVXXXXXXXXXXXFSRLAWTRRPDTAAVSEIL----ALCDIPDRRAREKLLPVLLEWDIR 443          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: PNW71848.1 (hypothetical protein CHLRE_16g670550v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 143.3 bits (360), Expect = 4.000e-30
Identity = 143/493 (29.01%), Postives = 203/493 (41.18%), Query Frame = 0
Query:    1 MGIAGLWACLRE-EGYVHPFEGV--ELAKHVEGKVLAIDASLWL-----MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLD---RENSSGALLSMSSQDFLAL---CLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRHGTTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVESEEKDTMTL----PYTWHSRPDFDRLKDILKPVYGAGG-------FGRKNLARKLLPLLLEWDARQ 469
            MG+  L+  L +  G +  + G   +L   + G+ LAID S+W+      Q L +  +  + + +  +  R+I  L  G  PV V EG  P AK+  L++R       S +      +   R+    ++L   V +LLD +GLP+  A GE EAMCA L      DAVVS+D DALL+GA   Y++ R+     P H   E +D      S+  L        LAL    +L GCD+ + G + VG KGAM  ++ L R              S   +   L+ LLRT      D A++ L    CS C+ C H     E HG K  E CG  P          C P AP            GA C C       ER L  +  RA       A       +  AA              A AA  +   ++ + L       W  RPD D +  ++ P+ G          +    +  KL P+L+EWD RQ
Sbjct:    1 MGVVNLFTELADYSGVIQNWTGANEQLVAEMCGQTLAIDTSVWIFQCSQQQDLKDAIYDEHARVLYTMIHRIISLLRHGVTPVFVLEGDTPEAKMGRLQQR-------SLAKGLGGMAGGNRRGGRHDALGRRVVQLLDLMGLPHVDAPGEAEAMCAALVAAGLADAVVSSDVDALLFGAPRQYRECRMQFD-TPRHTVVERVDPVAAARSAFGLTQPGGGCALALQTVAVLCGCDYSVAGGRGVGVKGAMGAVQQLTR-----------GRQSDAHVPGELLRLLRTG----PDPAVMELKA--CSGCKTCGH-----EKHGRKPCEQCGPGP----------CRPKAP------------GAGCSCRFHSSEPERVLMRVISRAVSTSPSFAA------DCEAALA------------AFAAEAQRARREAVALRGRGGLGWRGRPDVDGVFALMHPLLGGTSSDPNKLLWTHAEVRDKLRPVLMEWDMRQ 423          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_005648291.1 (hypothetical protein COCSUDRAFT_47423 [Coccomyxa subellipsoidea C-169] >EIE23747.1 hypothetical protein COCSUDRAFT_47423 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 137.9 bits (346), Expect = 1.700e-28
Identity = 131/487 (26.90%), Postives = 213/487 (43.74%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFE--------GVELAKHVEGKVLAIDASLWLMQSLLEGS-----HTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLAL---CLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRHGTTRKEA---HGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVESEEKDTM--TLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDA 467
            MG++ LW  LR EG V  +            +A  +EGKV+A+D SLW  Q+L++G+          + +K+ F+R+I++L  G  PV V +G  P  KLE L+ R    +   ++            N+ F  L +   +L  A+GL   QA GE EA+CA L+R   VDA V+ D DALL+GA  +++ ++  V   P   +   +   +   A L ++    LAL    LL+G D+ + G + VG K A+ +++ L +                 + +V ++D L   L +P +E    L   +C+ C+ C H   RK +   H  +   +C              C PA     ++ V       SC C   +    R +    ++A E  G    +L K   A  AY             AA AV E  E+  +      TW  RP+  ++  +++       +  +    K++ LL+EWDA
Sbjct:    1 MGVSDLWNLLRSEGMVREWNCETDGQLVQKAVAAKLEGKVVAVDVSLWTCQALMQGALVEVFPEEEARVVKVAFDRIINYLRFGCTPVGVLDGDAPEQKLETLQAR----FFSRFNRAGGGGG-----NSHFVHLCSLTAQLFKAMGLWVVQAPGEAEAVCAALDRAGHVDACVTKDSDALLFGAQTLFQTIK-PVTSTPNECKLSSVAMRDVR-AYLGINEGGELALTAIALLTGGDYHMGGAEGVGQKQALAVVKHLLKG---------------QKSDVGVLDSLAELLAQPPEEHAEVLRHDKCTGCKRCGHEGGRKSSMKNHSTRNPCEC--------------CPPAHDGTCRQHVH-----GSCACAFHRLESLRVVYKAVQKARESPG----FLEKAAAAEDAYRE-------QMEEAAKAVAEFGEEQELEPRQRLTWQHRPNVPQVARLVERC--GLPWEEQKTRGKMMALLMEWDA 429          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_004609401.1 (PREDICTED: flap endonuclease GEN homolog 1 [Sorex araneus])

HSP 1 Score: 136.7 bits (343), Expect = 3.700e-28
Identity = 84/247 (34.01%), Postives = 135/247 (54.66%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTA-FESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245
            MG+  LW  L       P +       + GK +A+D SLW+   QS+ +   T  K H++ +F R+ +  +M    V V EG PP  K + + +R +I +G      SS + + Q+   + F+S+  +   +L+ LG+P+ QA GE EAMCA LN   RVD  ++NDGDA LYGAH VY++  ++++     H   +    +S  + L +     + L +L GCD+L KGV  VG + A++++RIL+
Sbjct:    1 MGVTDLWQIL------EPVKQHTHLHSLSGKTIAVDLSLWVCEAQSVKKMMGTVVKPHLRNLFFRISYLTLMNVKLVFVMEGEPPKLKTDVMSKRNQIRYG------SSGKQRTQKTGRSHFKSVLRECCDMLECLGIPWVQADGEAEAMCAFLNASGRVDGCITNDGDAFLYGAHTVYRNFTMNIK---DPHVDCY--TISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLIRILK 230          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_016009377.1 (PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Rousettus aegyptiacus] >XP_016009378.1 PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Rousettus aegyptiacus] >XP_016009379.1 PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Rousettus aegyptiacus] >XP_016009380.1 PREDICTED: flap endonuclease GEN homolog 1 isoform X1 [Rousettus aegyptiacus])

HSP 1 Score: 136.3 bits (342), Expect = 4.900e-28
Identity = 86/246 (34.96%), Postives = 133/246 (54.07%), Query Frame = 0
Query:    1 MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWL--MQSLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQ 245
            MG+  LW  L  E   HP +   LA    GK +A+D SLW+   QS+ +   T  K H++ +F R+ H  +M    V V EG PP  K + + +R +I +G S    S    +     + F+S+  +  +LLD +G+P+ QA GE EAMCA LN   RVD  +++DGDA LYGA  VY++  ++ +     H   +    +S  + L +     + L +L GCD+L KGV  VG + A++++ IL+
Sbjct:    1 MGVNDLWQIL--EPVKHPIDLHSLA----GKTIAVDLSLWVCEAQSVKKMIGTVMKPHLRNLFFRITHLTLMDVKLVFVMEGEPPKLKADVINKRNQIRYGPSEKTWSQKTGR-----SYFKSVLRECLELLDCIGIPWVQAAGEAEAMCAYLNASGRVDGCLTDDGDAFLYGAQTVYRNFTMNAK---DPHVDCY--TMSSITSELGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIHILK 230          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: XP_002500101.1 (predicted protein [Micromonas commoda] >ACO61359.1 predicted protein [Micromonas commoda])

HSP 1 Score: 135.6 bits (340), Expect = 8.300e-28
Identity = 135/497 (27.16%), Postives = 209/497 (42.05%), Query Frame = 0
Query:   10 LREEGYVHPFEGVE---------LAKHVEGKVLAIDASLWLMQSLLEGS--HTHNK----------KHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSS--------GALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRHG--TTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVE--------SEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNLARKLLPLLLEWDAR 468
            L EEG +   +G +         + + V+GK LA+D SLW++Q+  + +    +N+          K  K+VFER +++L  G +PV V +G  P  KL  L  R    WG                  AF        ++L ALGLP  +A GE EA CA+++    VD  V++DGD+LL+GA  V+K LRL         R  +++R  ++        G  +   +    AL LL+G D+ + G K VG   A+ +++ L +                     + +D    S  +P  EAL      +C+ C  C+H      K  +  +G  +CGT           GC+             E++G  C C    R DER L  + +RA   +G    Y R F +  AA G           L  A+ VE         +E D+      W  RPD   L++I++       +  +    KLLP+L+EWD +
Sbjct:   37 LDEEGAIVRVDGSDEDDPDAQRIIRESVDGKALAVDLSLWIIQACTQQALDEVYNEDLGFDDPDASKTAKVVFERALNYLRHGCVPVGVIDGQAPWQKLGALRAR----WGAHAGGGGG----------AFGRCGEVALEVLRALGLPGVEAPGEAEATCAVMDSMGIVDGCVTSDGDSLLFGARTVFKTLRLS----QNDQRDLFMERVEAADVGKRLMLGDDVEHVAPALTALALLTGGDYDLTGAKNVGGTKALLVVKALAKDEARRTRAEPGGRDRRQRSLPARLDAFLASAPDPTIEAL-----DKCTGCARCKHDGCLKNKVKNHVRGCSECGT---------DAGCV-------------ERDGVECECPFHARADERWLHKVRERANATDG----YARSFRD--AARGYXXXXXXXEEALGDASDVEWVERAENDGDEFDSFR-KMRWRRRPDVAALQEIMETYC---QWEPRRTREKLLPVLVEWDMK 478          
BLAST of NO07G01710 vs. NCBI_GenBank
Match: KXZ54462.1 (hypothetical protein GPECTOR_4g1013 [Gonium pectorale])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-27
Identity = 130/462 (28.14%), Postives = 183/462 (39.61%), Query Frame = 0
Query:   24 LAKHVEGKVLAIDASLWLMQ-----SLLEGSHTHNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGMSYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCALLNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENSSGALLSMSSQDFLALCL-----LSGCDFLIKGVKKVGFKGAMEILRILQRXXXXXXXXXXXXXXSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRHGTTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGASCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTATVTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGRKNL-------ARKLLPLLLEWDARQ 469
            +   + GKVLAID S+W+ Q      L E       + +     R++  L  G  PV V EG  P AK+  L +R       S +      +   RK    +SL   V +LLD LG+P+  A GE EAMCA L         V++D DALL+GA AVY++ RL     P  +  E +D   ++     +       L L     L GCD+ + G K VG K AM+ +++L                   E +  +I  L   L E  D  + AL    C+ C+ C H     E HG +   +CG  P          C P A            E A C C   +   +R    +  RA    G    +  +  EA  A+ S           A  A   +E        ++W  RPD   +  +L P+ G+       L         KL PLL+EWD RQ
Sbjct:   34 IVAELSGKVLAIDTSVWIFQCSQQNDLKEAIFNEQARVLYTFHHRIVSLLRYGVTPVFVLEGDTPEAKMGRLNQR-------SLAKGLGGLASGNRKGGRHDSLGRKVVELLDELGVPHVDAPGEAEAMCAALVACGLASGAVTSDVDALLFGAGAVYRECRLSFD-QPKMNELERVDAREAARRCFGLRGGGGCTLALRAVACLCGCDYSVNGGKGVGVKTAMDAIQLLTVG---------------EEDDSHVIPALLRYLREGPDPRVTALK--SCTGCKTCGH-----EKHGRQPCPECGPGP----------CRPKA------------EAAGCGCAFHRSEPQRKFMRVIARAV---GTSQSFAAECSEALQAFESE----------AQRARTAAEALKRRIGAFSWSRRPDVRGVYSLLHPLLGSTSSDPDKLLWTYGEVRDKLRPLLMEWDMRQ 430          
The following BLAST results are available for this feature:
BLAST of NO07G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27203.14.700e-14842.25flap endonuclease 1-like protein [Nannochloropsis ... [more]
XP_013904313.11.100e-3229.37putative Flap endonuclease GEN [Monoraphidium negl... [more]
PRW33965.19.500e-3229.38flap endonuclease GEN-like protein 1 [Chlorella so... [more]
XP_003057829.18.100e-3128.16predicted protein [Micromonas pusilla CCMP1545] >E... [more]
PNW71848.14.000e-3029.01hypothetical protein CHLRE_16g670550v5 [Chlamydomo... [more]
XP_005648291.11.700e-2826.90hypothetical protein COCSUDRAFT_47423 [Coccomyxa s... [more]
XP_004609401.13.700e-2834.01PREDICTED: flap endonuclease GEN homolog 1 [Sorex ... [more]
XP_016009377.14.900e-2834.96PREDICTED: flap endonuclease GEN homolog 1 isoform... [more]
XP_002500101.18.300e-2827.16predicted protein [Micromonas commoda] >ACO61359.1... [more]
KXZ54462.11.100e-2728.14hypothetical protein GPECTOR_4g1013 [Gonium pector... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000698NSK000698Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01710.1NO07G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669090gene_2494Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g27gene3348Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01710.1NO07G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01710 ID=NO07G01710|Name=NO07G01710|organism=Nannochloropsis oceanica|type=gene|length=2907bp
ATGGGAATCGCAGGACTGTGGGCTTGCCTTCGGGAGGAGGGGTATGTGCA
TCCCTTTGAGGGCGTGGAATTGGCAAAGCACGTGGAGGGCAAGGTACTAG
CCATTGATGCCTCGTTATGGCTGATGCAGAGCCTGTTAGAGGGCAGTCAC
ACTCATAACAAGAAGCACATCAAGATTGTCTTTGAACGCGTCATCCATTT
CTTAATGATGGGGGCGCTACCTGTCCTGGTCTTCGAGGGCATGCCACCCC
CGGCCAAGCTGGAAGAGTTGGAGCGCCGGCGCAGGATCATGTGGGGCATG
TCCTACTCTGCCTGCTCGTCTAGCGAATCAAAGGTGCAACGCAAGAATAC
TGCATTTGAATCCCTTGCCACAGATGTCAAGAAGCTGTTGGATGCCTTGG
GATTGCCTTATGAGCAGGCTGTGGGGGAGGGAGAGGCAATGTGTGCGCTG
TTGAACCGACAGCATAGAGTGGATGCTGTTGTATCGAATGACGGCGATGC
ATTGCTGTATGGAGCGCATGCAGTCTATAAGGATCTGAGGTTGCATGTCC
GGTTCTTACCGGGGCATCATCGTGGAGAGTGGTTGGACCGAGAGAACTCG
TCGGGAGCGTTGCTATCCATGTCATCGCAAGACTTTTTGGCGCTATGCCT
TCTGTCTGGGTGTGACTTCCTGATAAAGGGCGTCAAAAAAGTAGGGTTCA
AAGGTGCCATGGAAATTCTTCGAATTCTCCAACGCCGACGTGCCAAGCAA
GAACAGCAACAGCGCCTATCCAGCAGCTCGCTGCACGAGATCGAAGTGAG
CCTCATAGATCTCCTCCGAACAAGCTTAACCGAGCCCGTAGACGAGGCCT
TAGTTGCCTTAAGCGGAGGGCAATGCTCCACCTGTCGAAATTGCCGACAC
GGCACAACCCGAAAGGAAGCACACGGCGCAAAGGGCTATGAGGACTGTGG
TACGCACCCAAAGACTCTGGGGGGGGATGGGAAAGGTGGTTGCATGCCGG
CCGCACCAGAGAAAGTCCAAAGGAAGGTGGACGAGGAGCAAGAGGGTGCA
TCTTGTCCTTGTGTGCGCTGCCAACGAAGGGATGAACGGACGCTGCAACT
CTTGGCGAAGCGGGCGGCGGAGGGGGAGGGGGGCTTGGCCAGGTACTTGC
GGAAGTTTGATGAAGCACGCGCTGCTTATGGGTCGGCAGGCGTTACGGCA
ACAGTAACACCACCACTAGCAGCAGCAGCAGTAGTAGAGAGTGAGGAAAA
GGACACGATGACGCTACCGTATACGTGGCATTCCCGGCCTGATTTTGACC
GTTTGAAGGACATCCTTAAACCTGTCTACGGAGCAGGAGGTTTTGGACGT
AAGAATCTCGCGCGGAAGCTCTTGCCTCTCTTACTAGAGTGGGACGCGCG
ACAGATAGGAGGCTTTCTGGGACAGAATTGGGATGGAGAGGGCGCAAGGG
AGGCCAATAAAGCGGGCTTGGCGTCTGCTGCAAAGCACGGATTTTTATTC
GCCCCGGTAAGAATCGAGCGGGTGTGTTTGATTGGTGCTAACGCTGCTAC
TGCTGCTGAGGGAAGGGGAGGAGGAGGAGGAGGAGAAGGAGGAAGGGGAG
GAGGAGGAGAAGGAGAAGGAACAGGAGGCACATGGCGGTATAGCATGGAA
TGGACTGCGCTGTGTCCTCAGGCGGAGGCAATGGTGGCTGAGGCGGCGCA
AGGTATGCGCGGGGAAGGTAAGGGTACGTCTGGGAAGAGTGGCGAGAGAG
GGGGGATGGGCGAGGGGGCTTTACCGACTTTGAAGGATGTTCTAAGCGAG
GGCCGGGGCTGCTTGCGTCAGACTTTGGTCCGAGCGCAATTCCCTGGTTT
GGTTCGCATGTTTGAGGAGGAGCAACAGCGGAAGCTCGCCACGCCCTCCC
GTCCCAAGAAGAAGGGAGTGAGGGGAAGAGCCACTGCGGCAGCAGCACCA
GTGCGGGCGAATATTTGCGCGGCTAATACCCTCGATCGTTATTTCTCTCT
GGAGGGAAAAAAGAATGCATCGCTCTCCCCGTTTCCATCGCCGCCAAGGT
CGCAAGACCAGCAACTGGAGCAGGAGCAACGGCAGGTCCAGCAGCATCAG
CCACAGCAGAATAGTCCCTTTGAGAATCACATTTCTCCAGCCGCTGACCC
TTTTTTGTCGACCGCCTCCCCTTCTTTTGCCTCCTCCTACCCGCTCTCAT
CTATCGATGAAAGGGTGGCAGAGCCCGCAGTCTTGGAACGCACTCCCATC
GCCCCCATTCCTTCCTTCTCCTTCTCCCCTTCAAAATCCCATTCTTCCTC
GTCATTGGTCCGTTGTCCGCCTGCTCCTCGGAAAGGCAAGCGTCCTGGAG
GTCCTCGGGTGGGAGAGGGAGTAGATGCCCCTGGCCGAGCAAGTGGGAGG
AGGAATTTAGATAGATATTTTAAGCGTGTGCGGGGTGATGGCACTGCGCG
GGAGAGAGAGTCCTTGAATTCAATTGCTAGAAGGGTGACGTCGGGTATGG
AGGGAGAGGGAGGAGGGGAAGAAGGAACCAAAAGTCAGGAACAGGGCAAT
GTGACGGAGGGCAGCACTTCCGACAGCAGCAGCTTTAGCAGGCAGGATAA
AGATAAAAATGACGGCGAGGATTTAGGTGGTGGGGGGAATGAAGCGAGGA
GAGTGGAGGAGGAGGAGAAGGAGGAATTGTCCGTAATAGACCTGACAGAT
GTACCTTACATTTACTCACCGGCCGTGGCTGTGCAGCAGCAGCGACAGCA
ACAGCTGCAGCAGCAGCAGCAACACCACCATCGCGTGTCATCAGATGATG
ACGATGAGAACGGGGACGGAGAGGAGGAGGACGAGGTGATTTCGTCGCCT
GAGGTGGAGCGGGTACAACGTGCAGTGGCATGCGTGGACTTGGTTACTCC
ACCTTGA
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protein sequence of NO07G01710.1

>NO07G01710.1-protein ID=NO07G01710.1-protein|Name=NO07G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=969bp
MGIAGLWACLREEGYVHPFEGVELAKHVEGKVLAIDASLWLMQSLLEGSH
THNKKHIKIVFERVIHFLMMGALPVLVFEGMPPPAKLEELERRRRIMWGM
SYSACSSSESKVQRKNTAFESLATDVKKLLDALGLPYEQAVGEGEAMCAL
LNRQHRVDAVVSNDGDALLYGAHAVYKDLRLHVRFLPGHHRGEWLDRENS
SGALLSMSSQDFLALCLLSGCDFLIKGVKKVGFKGAMEILRILQRRRAKQ
EQQQRLSSSSLHEIEVSLIDLLRTSLTEPVDEALVALSGGQCSTCRNCRH
GTTRKEAHGAKGYEDCGTHPKTLGGDGKGGCMPAAPEKVQRKVDEEQEGA
SCPCVRCQRRDERTLQLLAKRAAEGEGGLARYLRKFDEARAAYGSAGVTA
TVTPPLAAAAVVESEEKDTMTLPYTWHSRPDFDRLKDILKPVYGAGGFGR
KNLARKLLPLLLEWDARQIGGFLGQNWDGEGAREANKAGLASAAKHGFLF
APVRIERVCLIGANAATAAEGRGGGGGGEGGRGGGGEGEGTGGTWRYSME
WTALCPQAEAMVAEAAQGMRGEGKGTSGKSGERGGMGEGALPTLKDVLSE
GRGCLRQTLVRAQFPGLVRMFEEEQQRKLATPSRPKKKGVRGRATAAAAP
VRANICAANTLDRYFSLEGKKNASLSPFPSPPRSQDQQLEQEQRQVQQHQ
PQQNSPFENHISPAADPFLSTASPSFASSYPLSSIDERVAEPAVLERTPI
APIPSFSFSPSKSHSSSSLVRCPPAPRKGKRPGGPRVGEGVDAPGRASGR
RNLDRYFKRVRGDGTARERESLNSIARRVTSGMEGEGGGEEGTKSQEQGN
VTEGSTSDSSSFSRQDKDKNDGEDLGGGGNEARRVEEEEKEELSVIDLTD
VPYIYSPAVAVQQQRQQQLQQQQQHHHRVSSDDDDENGDGEEEDEVISSP
EVERVQRAVACVDLVTPP*
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Synonyms
Publications