NO07G00140, NO07G00140 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G00140
Unique Name	NO07G00140
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3600
Alignment location	chr7:49538..53137 +

Link to JBrowse

Properties


Property Name	Value
Description	Protein phosphatase 2c

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:49538..53137 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006470	protein dephosphorylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0004722	protein serine/threonine phosphatase activity
GO:0003824	catalytic activity
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036457	PPM-type_dom_sf
IPR015655	PP2C
IPR001932	PPM-type_phosphatase_dom

Homology

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: EJK71871.1 (hypothetical protein THAOC_06651 [Thalassiosira oceanica])

HSP 1 Score: 216.1 bits (549), Expect = 3.600e-52
Identity = 107/191 (56.02%), Postives = 136/191 (71.20%), Query Frame = 0

Query:  522 CALPDHRVQAGCTSVVALLVDNDLVVANAGDSRAVLCRK-GTAIALSEDHKPLQDRELERIRRAGGFVTEQGRVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIVQV 712
            C LPDH V AGCT+V A++V   LVVANAGDSRAV+CR  G A  LS DHKPLQ+RE+ RI  AGGFV + GRVNGNLNLSRSIGDLKYK    +   +QMI+AEPD+   +L   DEF++L CDG+WDC+TN+ECV +VR R+        + +P   +  E++D  ++ DPR + GIGGDNMT +IV +
Sbjct:    2 CNLPDHPVHAGCTAVCAVMVGRTLVVANAGDSRAVMCRAGGLAEPLSFDHKPLQNREMNRITNAGGFVNQFGRVNGNLNLSRSIGDLKYKQVPGIDPAEQMITAEPDILSTTLREGDEFIILGCDGIWDCLTNEECVKYVRDRI--------DRKPPHEIGAEMLDEIVSADPRASQGIGGDNMTIMIVDL 184

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: GAX27978.1 (protein phosphatase [Fistulifera solaris])

HSP 1 Score: 216.1 bits (549), Expect = 3.600e-52
Identity = 114/197 (57.87%), Postives = 139/197 (70.56%), Query Frame = 0

Query:  522 CALPDHRVQAGCTSVVALLVDNDLV-VANAGDSRAVLCR-KGTAIALSEDHKPLQDRELERIRRAGGFVTEQGRVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIVQVDERVR 717
            C LPDH + AG T++VA+L DN L+ VANAGDSRAVLCR  G   ALSEDHKP+Q  EL RI  AGGFV   GRVNGNLNLSRSIGDLKYK    L   +QMI+AEPD+ +I L PDDEF++L CDG+WDCMTN++ V +VRSRL            L+ +  +++D  L+ DPR T GIGGDNMT +IV +  + R
Sbjct:  257 CTLPDHPIHAGATAIVAVLEDNGLLTVANAGDSRAVLCRAHGQVEALSEDHKPMQATELARIVAAGGFVNAFGRVNGNLNLSRSIGDLKYKQVPYLTPAEQMITAEPDIRQIQLEPDDEFILLGCDGIWDCMTNEKAVAYVRSRLDT-------CSSLNEICTQLLDDILSIDPRVTQGIGGDNMTLMIVDLQPQKR 446

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: PNH10818.1 (putative protein phosphatase 2C 11 [Tetrabaena socialis])

HSP 1 Score: 216.1 bits (549), Expect = 3.600e-52
Identity = 114/207 (55.07%), Postives = 149/207 (71.98%), Query Frame = 0

Query:  510 AVRSGIGGSRQQCALPDHR-VQAGCTSVVALLVDNDLVVANAGDSRAVLCRKGTAIALSEDHKPLQDRELERIRRAGGFVTEQG---RVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTP-DDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIVQV 712
            A   G  G  +    P+   VQAGCT+VVA+ + ++L VANAGDSR VLCR G A+ALSEDHKP Q+ E  RI  AGGF++E G   RVNGNLNLSR+IGDLKYK N  LPAKDQ+ISA+PD+ RI+L+P +D F +LACDGVWD M+NQ+ +DFV ++L+       +G   S+ +  ++DACLA DP++  G+G DNMT +IVQ+
Sbjct:  159 APAEGGSGEAEAAESPEEELVQAGCTAVVAVKLGSELYVANAGDSRGVLCRGGKAVALSEDHKPAQEGERNRIIAAGGFLSEIGGVCRVNGNLNLSRAIGDLKYKTNVELPAKDQIISAQPDIRRITLSPTEDRFFLLACDGVWDVMSNQDAIDFVGAKLE-------QGMTPSQASCALLDACLASDPKEARGVGCDNMTVVIVQL 358

HSP 2 Score: 132.1 bits (331), Expect = 6.900e-27
Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 0

Query:    1 MGAYLSTPITDKESEDGEGGHIRYGVSAMQGWRRSMEDAHVAVPALKGDERAAIFGVFDGHGGREVAHFVARHLVEEVVRRGEWGDGAYEEALRQSFHRMDDMLRQEEYDPELREYK 118
            MGAYLS PITDKE+ +G+G  +R+G  AMQGWRR+MEDAH+A   +  D   A+FGVFDGHGG EVA F  +++  E+ R  E+  G+ E++L + FHRMD+MLR + Y  EL + K
Sbjct:    1 MGAYLSQPITDKETFEGDGNGLRFGGGAMQGWRRTMEDAHLAEVNISNDPNLAVFGVFDGHGGAEVAKFCQKYMTLELQRTEEFSKGSVEDSLIKVFHRMDEMLRDQRYAEELEKLK 117

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: XP_005840132.1 (hypothetical protein GUITHDRAFT_64573 [Guillardia theta CCMP2712] >EKX53152.1 hypothetical protein GUITHDRAFT_64573 [Guillardia theta CCMP2712])

HSP 1 Score: 213.0 bits (541), Expect = 3.100e-51
Identity = 105/203 (51.72%), Postives = 142/203 (69.95%), Query Frame = 0

Query:  510 AVRSGIGGSRQQCALPDHRVQAGCTSVVALLVDNDLVVANAGDSRAVLCRKGTAIALSEDHKPLQDRELERIRRAGGFVTEQG----RVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLI 709
            AV+ G  GS +     +    AGCT+ V +L   ++ VANAGDSR+VLCRKG A+ LSEDHKP   +E  RI  AGG+V+E      RVNGNLNLSRSIGDLKYK ++ LP   Q+I+AEPD+ RI  T +DEF++ ACDGVWDCM+NQ+ VDFVR+RL       +  + +S++  ++ + C++ DP++T GIGGDNMTC++
Sbjct:  165 AVQQGTEGSNKLNGCSEEATCAGCTANVVVLTAKEIFVANAGDSRSVLCRKGQAVPLSEDHKPNNPKERSRITSAGGWVSEAANGHFRVNGNLNLSRSIGDLKYKSDSKLPPSKQVITAEPDVRRIPRTEEDEFIITACDGVWDCMSNQQLVDFVRARL-------KSNQVISKICEDIFEKCISVDPKQTQGIGGDNMTCIM 360

HSP 2 Score: 121.3 bits (303), Expect = 1.200e-23
Identity = 62/114 (54.39%), Postives = 77/114 (67.54%), Query Frame = 0

Query:    1 MGAYLSTPITDKESEDGEG-GHIRYGVSAMQGWRRSMEDAHVAVPALKGDERAAIFGVFDGHGGREVAHFVARHLVEEVVRRGEWGDGAYEEALRQSFHRMDDMLRQEEYDPEL 114
            MG+YLS+P+ DKES DG G G I+YG+SAMQGWR +MEDAH+A   +       IFGVFDGHGGREVA FV++H   E         G  E +L  +FHRMD MLR+++Y  EL
Sbjct:    1 MGSYLSSPVKDKESHDGSGIGGIKYGLSAMQGWRTNMEDAHIACGNVGKQNPLGIFGVFDGHGGREVAQFVSKHFQTEFEGIVSNQQGKVEPSLPIAFHRMDAMLREQKYAAEL 114

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: PSC74095.1 (phosphatase 2C isoform B [Micractinium conductrix] >PSC74096.1 phosphatase 2C isoform A [Micractinium conductrix])

HSP 1 Score: 212.2 bits (539), Expect = 5.200e-51
Identity = 114/201 (56.72%), Postives = 140/201 (69.65%), Query Frame = 0

Query:  512 RSGIGGSRQQCALPDHRVQAGCTSVVALLVDNDLVVANAGDSRAVLCRKGTAIALSEDHKPLQDRELERIRRAGGFVTEQG---RVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIV 710
            + G G   Q    P+  VQAGCT+VVAL+V + L VANAGDSRAVLCR   A+ +SEDHKP    E  RI  AGGF++E G   RVNGNLNLSR+IGDL+YK N+ L  KDQ+I+AEPD+ +  LTPDD FLVLACDG+WD MTNQ+ VDFV  RL        +G+    ++ E+++ACLA DPR+  GIG DNMT  IV
Sbjct:  156 KEGAGAGLQ----PEVTVQAGCTAVVALIVRDMLYVANAGDSRAVLCRGSKALPMSEDHKPAAPDERARIMAAGGFLSEIGGITRVNGNLNLSRAIGDLRYKMNSELEPKDQIITAEPDIMQQQLTPDDRFLVLACDGIWDVMTNQQVVDFVAQRL-------AQGQQPQDISSELLNACLASDPREARGIGCDNMTAAIV 345

HSP 2 Score: 102.1 bits (253), Expect = 7.600e-18
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 0

Query:    1 MGAYLSTPITDKESEDGEGGHI-RYGVSAMQGWRRSMEDAHVAVPALKGDERAAIFGVFDGHGGREVAHFVARHLVEEVVRRGEWGDGAYEEALRQSFHRMDDMLRQEE 109
            MG YL+ P+TDKE+  G+   +  +G+SA QGWR++MEDAH+   AL   +   +FGVFDGHGG EVA F ++ +  E+     + +G +EE L++ FHRMD+++R  E
Sbjct:    1 MGQYLAVPVTDKETLSGQHERLGTWGISAHQGWRKNMEDAHI---ALHMSDDCHLFGVFDGHGGPEVAKFCSKRMPTELQACSGFKEGRFEECLKEVFHRMDELMRSRE 106

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: PRW61451.1 (putative phosphatase 2C 60 isoform X1 [Chlorella sorokiniana])

HSP 1 Score: 209.9 bits (533), Expect = 2.600e-50
Identity = 112/199 (56.28%), Postives = 137/199 (68.84%), Query Frame = 0

Query:  514 GIGGSRQQCALPDHRVQAGCTSVVALLVDNDLVVANAGDSRAVLCRKGTAIALSEDHKPLQDRELERIRRAGGFVTEQG---RVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIV 710
            G G   +    P+  +QAGCT+VVAL+V + L VANAGDSRAVLCR G A+ +SEDHKP Q  E  RI  AGGF++E G   RVNGNLNLSR+IGDL+YK N  L  KDQ+I+AEPD+    LT DD FLVLACDG+WD M NQ+ VDFV  RL        +G     +A E++++CLA+DPR+  GIG DNMT  IV
Sbjct:  576 GKGSMDEPALQPEITIQAGCTAVVALIVHDQLYVANAGDSRAVLCRGGKAVPMSEDHKPAQPDERARIMAAGGFLSEIGGITRVNGNLNLSRAIGDLRYKMNNELEPKDQIITAEPDVLTQRLTRDDSFLVLACDGIWDVMDNQQVVDFVHQRL-------AKGIAPRDIASELLNSCLANDPREARGIGCDNMTAAIV 767

HSP 2 Score: 106.3 bits (264), Expect = 4.000e-19
Identity = 61/127 (48.03%), Postives = 79/127 (62.20%), Query Frame = 0

Query:    1 MGAYLSTPITDKESEDGEGGHI-RYGVSAMQGWRRSMEDAHVAVPALKGDERAAIFGVFDGHGGREVAHFVARHLVEEVVRRGEWGDGAYEEALRQSFHRMDDMLRQEEYDPEL----REYKAGLGP 123
            MG YLS+P TD+ES  G    +  YGV +MQGWR+S EDAH+A       +   IFGVFDGHGG EVA F +R +  E+ R   +  GA+EE+L+Q FHRMD+++R  E   EL    RE + G  P
Sbjct:  425 MGQYLSSPNTDQESVAGTHERLGAYGVVSMQGWRKSQEDAHIAEHL---SDDCHIFGVFDGHGGPEVALFCSRRMPLELKRHPAFAAGAFEESLKQVFHRMDELMRSREGFTELEVLRRECEGGKEP 548

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: GAX09309.1 (protein phosphatase [Fistulifera solaris])

HSP 1 Score: 208.8 bits (530), Expect = 5.800e-50
Identity = 111/197 (56.35%), Postives = 137/197 (69.54%), Query Frame = 0

Query:  522 CALPDHRVQAGCTSVVALLVDNDLV-VANAGDSRAVLCR-KGTAIALSEDHKPLQDRELERIRRAGGFVTEQGRVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIVQVDERVR 717
            C LPDH + AG T++VA+L DN L+ VANAGDSRAVLCR  G   ALSEDHKP+Q  EL RI  AGGFV   GRVNGNLNLSRSIGDLKYK    L   +QM +AEPD+ +I +  DDEF++L CDG+WDCMTN++ V +VRSRL            L+ +  +++D  L+ DPR T GIGGDNMT +IV +  + R
Sbjct:  262 CTLPDHPIHAGATAIVAVLEDNGLLTVANAGDSRAVLCRAHGQVEALSEDHKPMQATELARIVAAGGFVNAFGRVNGNLNLSRSIGDLKYKQVPYLSPAEQMNTAEPDIRQIQIELDDEFILLGCDGIWDCMTNEKAVAYVRSRLDT-------CSSLNEICTQLLDDILSIDPRVTQGIGGDNMTLMIVDLQPQKR 451

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: XP_005642833.1 (protein phosphatase 2C [Coccomyxa subellipsoidea C-169] >EIE18289.1 protein phosphatase 2C [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 206.1 bits (523), Expect = 3.700e-49
Identity = 110/184 (59.78%), Postives = 131/184 (71.20%), Query Frame = 0

Query:  529 VQAGCTSVVALLVDNDLVVANAGDSRAVLCRKGTAIALSEDHKPLQDRELERIRRAGGFVTEQG---RVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIV 710
            VQAGCT+VVA+L   +L VANAGDSRAVLCR G A+ALSEDHKP  + E  RI  AGGFV++ G   RVNGNLNLSR+IGDLKYKGN  L   +Q+I+A+PD+ +I L  +D F VLACDGVWD M+NQE V FV   L         G  L  +A +++DACLA DPR+T GIG DNMT  IV
Sbjct:  175 VQAGCTAVVAVLKGQELWVANAGDSRAVLCRGGQALALSEDHKPQSEGERNRITAAGGFVSDVGGVSRVNGNLNLSRAIGDLKYKGNDQLAPAEQIITAQPDIVKIELRHEDRFFVLACDGVWDVMSNQEVVQFVSVCLD-------RGMALPDIASQLLDACLAPDPRETRGIGCDNMTACIV 351

HSP 2 Score: 122.1 bits (305), Expect = 7.100e-24
Identity = 61/114 (53.51%), Postives = 78/114 (68.42%), Query Frame = 0

Query:    1 MGAYLSTPITDKES-EDGEGGHIRYGVSAMQGWRRSMEDAHVAVPALKGDERAAIFGVFDGHGGREVAHFVARHLVEEVVRRGEWGDGAYEEALRQSFHRMDDMLRQEEYDPEL 114
            MGAYLS PITDKE+   G+ G + YG S+MQGWRR+MEDAH+A   L     AAIFGVFDGHGG EVA F  ++L EE+ R  ++ +G   ++L + FH+MD ML+   Y  EL
Sbjct:    1 MGAYLSQPITDKETFIGGKAGFLEYGGSSMQGWRRTMEDAHIATVDLGNAPDAAIFGVFDGHGGSEVAKFCQKYLAEEITRLEKYHEGNLPDSLVEVFHKMDSMLKDSAYGAEL 114

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: XP_011395746.1 (putative protein phosphatase 2C 11 [Auxenochlorella protothecoides] >KFM22880.1 putative protein phosphatase 2C 11 [Auxenochlorella protothecoides])

HSP 1 Score: 203.8 bits (517), Expect = 1.900e-48
Identity = 109/185 (58.92%), Postives = 132/185 (71.35%), Query Frame = 0

Query:  528 RVQAGCTSVVALLVDNDLVVANAGDSRAVLCRKGTAIALSEDHKPLQDRELERIRRAGGFVTEQG---RVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIV 710
            R  AGCT+VVALL    L VANAGDSRAVL R+G A+ LS DHKP    E  RI  AGGFV+E G   RVNGNLNLSR+IGDL+YK N AL AKDQ+I+A+PDL   +L P D F+VLACDG+WD M+NQ+ VDFV +RL        EG   ++ A E+++AC+A DPR+T GIG DNMT  +V
Sbjct:  136 RKLAGCTAVVALLKGRRLFVANAGDSRAVLARRGVAVPLSHDHKPSAAGERARIMAAGGFVSEVGGITRVNGNLNLSRAIGDLRYKANPALEAKDQIITAQPDLCVEALVPGDRFMVLACDGIWDVMSNQQVVDFVGARLD-------EGLTPTQAASELLNACVASDPRETRGIGCDNMTASVV 313

HSP 2 Score: 113.6 bits (283), Expect = 2.500e-21
Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 0

Query:    1 MGAYLSTPITDKESEDGEGGHIRYGVSAMQGWRRSMEDAHVAVPALKGDERAAIFGVFDGHGGREVAHFVARHLVEEVVRRGEWGDGAYEEALRQSFHRMDDMLRQEEYDPELREYKAGLGPAT 125
            MG YLS+P+T+K++ +G    + YG+SA QGWR++MEDAH+A    K      +FG+FDGHGG EVA F + ++ EE+ R GE+  G YE +L   FHRMDD++R  E   +L   +  L  A+
Sbjct:    1 MGQYLSSPVTEKDTLEGSTDDLSYGISAHQGWRKNMEDAHIAHHISKD---TYLFGIFDGHGGPEVAKFCSMYIREELERSGEFKAGEYEGSLVHVFHRMDDLMRSAEGFSQLESIRKSLDKAS 121

[Close]

BLAST of NO07G00140 vs. NCBI_GenBank
Match: OMJ71141.1 (hypothetical protein SteCoe_30730 [Stentor coeruleus])

HSP 1 Score: 203.8 bits (517), Expect = 1.900e-48
Identity = 108/181 (59.67%), Postives = 132/181 (72.93%), Query Frame = 0

Query:  531 AGCTSVVALLVDNDLVVANAGDSRAVLCRKGTAIALSEDHKPLQDRELERIRRAGGFVTEQGRVNGNLNLSRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDCMTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIGGDNMTCLIVQV 712
            AGCTSVVAL+V+N L VANAGDSR +LCR G AI LS+DHKP   +E +RI RAGG V E GRV GNLNLSRSIGD+ YK NT++P KDQMISA PD+    L   D+FLVLACDGVWD +T+QECVDFV  R+        + +PL+ +A EV+D CLA D   + G+G DN T +IV++
Sbjct:  133 AGCTSVVALIVNNTLYVANAGDSRCILCRDGRAIELSQDHKPDLPQERDRIIRAGGIV-EDGRVMGNLNLSRSIGDMDYKKNTSIPPKDQMISAYPDVRIEELGNKDQFLVLACDGVWDMLTSQECVDFVAQRI--------KNKPLNVIAEEVLDRCLAPDIASSGGLGCDNTTIVIVEL 304

HSP 2 Score: 97.4 bits (241), Expect = 1.900e-16
Identity = 46/108 (42.59%), Postives = 71/108 (65.74%), Query Frame = 0

Query:    1 MGAYLSTPITDKESEDGEGGHIRYGVSAMQGWRRSMEDAHVAVPALKGDERAAIFGVFDGHGGREVAHFVARHLVEEVVRRGEWGDGAYEEALRQSFHRMDDMLRQEE 109
            MG YLS+PI DK++   E    +     MQGWR +MEDA +   +L   E + +FGVFDGHGG+E+A FV+RH  +E++    + +  YE+AL+ +F RMD++L+ ++
Sbjct:    1 MGPYLSSPIRDKKTLTSENARTKCASCEMQGWRNTMEDAKLVNLSL--SETSMLFGVFDGHGGKEIAEFVSRHFCQELLSNRAFQNRNYEQALKDTFLRMDELLKTQD 106

The following BLAST results are available for this feature:

BLAST of NO07G00140 vs. NCBI_GenBank

BLAST of NO07G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EJK71871.1	3.600e-52	56.02	hypothetical protein THAOC_06651 [Thalassiosira oc...	[more]
GAX27978.1	3.600e-52	57.87	protein phosphatase [Fistulifera solaris]	[more]
PNH10818.1	3.600e-52	55.07	putative protein phosphatase 2C 11 [Tetrabaena soc...	[more]
XP_005840132.1	3.100e-51	51.72	hypothetical protein GUITHDRAFT_64573 [Guillardia ...	[more]
PSC74095.1	5.200e-51	56.72	phosphatase 2C isoform B [Micractinium conductrix]...	[more]
PRW61451.1	2.600e-50	56.28	putative phosphatase 2C 60 isoform X1 [Chlorella s...	[more]
GAX09309.1	5.800e-50	56.35	protein phosphatase [Fistulifera solaris]	[more]
XP_005642833.1	3.700e-49	59.78	protein phosphatase 2C [Coccomyxa subellipsoidea C...	[more]
XP_011395746.1	1.900e-48	58.92	putative protein phosphatase 2C 11 [Auxenochlorell...	[more]
OMJ71141.1	1.900e-48	59.67	hypothetical protein SteCoe_30730 [Stentor coerule...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL102	nonsL102	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL098	nonsL098	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR071	ncniR071	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR136	ngnoR136	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR130	ngnoR130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000909	NSK000909	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO07G00140.1	NO07G00140.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|552057	gene_2317	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100185g8	gene3166	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO07G00140.1	NO07G00140.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO07G00140 ID=NO07G00140|Name=NO07G00140|organism=Nannochloropsis oceanica|type=gene|length=3600bp
GTAGCGTTCAGAGAAGATGCTTCTTCGCTGTCTTCGTTCTCTCTCAACTG
ACACCGACCACACATTCATCTCCGTCAAGGCGGCCTCAAACTGCAGAAAA
GGCGAGCAGGGGAGCCCTGGCAGCAGCCGCGTGGGCATTGCGGGGCAGGC
AGGCCATTTGTGACCAGCTCTCTCACCTCCGACCACCACGCGTCTTGCCT
TCGCTTCCTCCTCGTCGTCCTTCACTAAATTTGCATGCGAGGTGATGCCT
GGTCGAAGGACGGACAATGCCACCGTCGCATGGGTTCTCACATAGCACTT
AATGCAGAGGGGACGATTGCTGGCATGGGGGCGTTAGAGGGGATGCCGAG
TGCATTGGCAAGCAGCTTTGCTTGGCAAGCTGCACTTCTCTCGCTCCTTT
CCCCCTTCGATGAAAAACTGCAACCAGGCCAGAAAGTGCTGCTATTCGAG
GCATGCAACTTCCCCTCCACCATCAAAACATGCTCACCTTTTCGTCACGA
AGGTCGTGCTTTGCCTTGGCCCCGTGGCATAATGCGCACTCGTTGCTTGG
TACGGGGCGGCCACGAATTACTCCTTTATGTCCCTCGCCGCCTCTCACCC
TCCTTCCTTTCCACCCTCTCCCCATCCACACAGGCTAAGACCTCGCAAAT
TTCTTGGTATAGCCGTGAGAGGGAGAGGGAGATAGAGTCAGCAAAAAGGA
AAGAGAGATGGGGGCGTATCTGAGCACCCCCATCACAGATAAGGAGTCCG
AGGACGGGGAAGGCGGTCACATACGATATGGCGTTTCGGCCATGCAGGGT
TGGCGCCGGAGCATGGAGGACGCTCATGTAGCTGTGCCTGCATTGAAGGG
GGACGAACGGGCGGCGATCTTCGGGGTGTTTGACGGACATGGAGGGAGAG
AGGTAGCGCATTTTGTGGCGCGACATCTGGTTGAGGAGGTGGTGCGGAGG
GGGGAGTGGGGGGATGGGGCGTACGAGGAGGCGTTACGGCAATCATTTCA
TCGCATGGACGACATGCTACGGCAGGAGGAGTACGACCCAGAGCTTAGGG
AGTACAAGGCAGGCTTGGGGCCCGCCACTACTTCCGCTCCGGCACCAACT
GTGACTGTACAATCAGCAGCAGCACCAGCAGCACCAGCAACAGCACCAGC
AACAGCAGCACCAACTCCAGCAGCAACAACGACAACTACTACTACAACAA
TTGAAGCGACGACAACAGCAGCATCAGTGACTGTCTTAAACAGCAACACG
GAGATGGAGGTCGTGGGAAAAGATGTGGGAGGCGGGGGGGCTAAGGTAGG
AGGGGAGGAAGGGAGCGGTCGTCTGACGGCGCAAGAGGCAATCGAAATGC
TGCAAAAGATTCTTGTTATTAGCAACGCTGGTGGGAAAGAAGGAGGAGAA
GGGGTACCAGCAGCGGGAGGAGGAGGAGGACGTGGAGGAGGAGGAGGAGG
AGAAAGCGGAGGAGAAAGCGGAGGAGGAGGAAGCAGAGGAGGAGGAGGGG
ATGAGATCAGTAGTGAGAAGGCCGCTGCGCTGGTTGCGGCGATGGGTGCA
GCGTTAATGAGCGGGGAGGAGGAAGGAGAGGAAGAAAAGGAAGGGAAGGA
AATGGCTGCGTCAGTGGCACTGGCGCAGAGCAGCATCAGCACTCTCGTCT
CGCCGTCAGAGTTGGTCATTCCGGACGACGACGTTTTGTCTAGAGACGGA
GAGGGGAAGGGAGGGAGGCAGGAGGGCTTAGCGTTGCGACCGGTGGGGGA
CCCCTTAGCGAGTAAAGAGGAAGGGGATGAGCAGGGCACGCCCCGTAGTC
CGCTTCCCTTCGTTGACGCGGCGAGTGCGCTTCTGAGAGCACAAGGTGTG
ACTTCTCCGTTTCAAGGGGGGCCGAGGGGGGAAGAGGTGGAGGGGGAGGG
AATGAGGACCGTTGCCAAAAAAGCGGCAGCGGCGGTGGCGGAAAAGGTGG
TGGAGGAGCTGTTGAGTCATGCGATGGAGGGAGAGACCGTGCTGGAAGAG
GTCAATGACGAGGGCGAGGAGGAGGGGGATGAGATGGAGCAGGGGGGTAA
AGAGGAAGAGGAAAGGATGGAGGGTTACAGCAGCAGCAGCGGCAGCAGTA
GCGGCAGCAGTAGCATCATTATAAGTAGTACAGGCACCGGTGGCACGAGC
AGCACAAGCGCCAGCACCAACAGCGTCGTCTCCTCCTCCTATCCTCCCCC
ACCTTCCCCCCCCTCCACGTCACCCTGCCCCACCGCCGTCCGGAGCGGTA
TCGGCGGCTCTCGACAGCAGTGTGCCTTGCCCGACCATCGGGTGCAGGCT
GGCTGCACCTCCGTCGTAGCCCTCCTGGTCGATAACGACCTCGTGGTCGC
CAATGCGGGCGACTCGCGCGCGGTGCTGTGCAGGAAAGGGACTGCCATCG
CTTTGTCGGAGGATCACAAGCCGCTGCAAGACAGGGAGCTGGAGAGAATA
AGGCGCGCGGGGGGTTTCGTCACGGAGCAGGGGAGGGTGAATGGGAATCT
GAACTTGAGTCGATCAATTGGGGATTTGAAGTATAAAGgtaaggggggag
cgaagggggcaacggggggagggaagagggagcggtgtgtagtgagggaa
tgttgcgatgtggatgatgctctgcgagttcgttttcttctcctttgtct
aagtcttgcccactccatattccgcactccattcatccaccgctccttca
ctcccttcctcccttacccagGCAACACTGCCCTCCCTGCCAAGGACCAG
ATGATCTCGGCCGAGCCCGACCTCGCCCGCATCTCTCTCACGCCGGACGA
CGAGTTTCTTGTGCTCGCCTGTGACGGGGTGTGGGATTGTATGACGAACC
AGGAGTGTGTCGATTTTGTGCGCAGCAGGCTGCAAGCCAGGAGGGAGGAA
GGGAGGGAGGGCGAGCCGTTGAGCAGAGTGGCGGGGGAGGTGGTGGATGC
GTGCCTGGCAGACGACCCGCGGAAGACCACGGGCATTGGAGGCGACAATA
TGACCTGTCTGATCGTTCAGGTGGACGAGAGGGTGAGAGGAAAGAGGGGG
GGGTAAGGCGAGAAAGTAGGAGATAAAGGAGCCGAGAGTGTCGCTGTGGG
AGAAGGTGGGAGGGAAGGGAGAAGGAGGGAAGAAAGCAAGGAGGGGGGGA
GGGAGGAGACACATGATGGGCTGAGTGTGATGTGGATTGTGTCTTGCGGC
GCTCTGATATGCTGCTGATAGCATGCACTCACGAAGTGCAGGGAGCAGGA
AAGGAGGGAAGGAGGGAGGGAGAAAAGTGACTTTAAGTGAGCGTATATTT
TTATGTTTATTTTAAGACGGCGCTCTTACAGGGCGGCAGGCAGGTAAAGG
GCGCTGCGAGGGCAGGGGGGGGAGGAAAGTCACAAAAGAAAAAGTGAACA
AGAACCAGAGAAGGAAAAAACGGGAAATTAAAAAACGAATCAGGAAGGCC
AGTGCAATGGCAGAATGTTAAAACAGCAACAGCCGCAGCACCACCATCAC
CAGCAGGAGTCAATTCGCTAATGTACGACTGCACGCAGTAGATGACAGAC
GGAAAAGACTGAAGATAGCAACGAGTAAAGAAAGTGAAAACGTCACCAAA

protein sequence of NO07G00140.1

>NO07G00140.1-protein ID=NO07G00140.1-protein|Name=NO07G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bp
MGAYLSTPITDKESEDGEGGHIRYGVSAMQGWRRSMEDAHVAVPALKGDE
RAAIFGVFDGHGGREVAHFVARHLVEEVVRRGEWGDGAYEEALRQSFHRM
DDMLRQEEYDPELREYKAGLGPATTSAPAPTVTVQSAAAPAAPATAPATA
APTPAATTTTTTTTIEATTTAASVTVLNSNTEMEVVGKDVGGGGAKVGGE
EGSGRLTAQEAIEMLQKILVISNAGGKEGGEGVPAAGGGGGRGGGGGGES
GGESGGGGSRGGGGDEISSEKAAALVAAMGAALMSGEEEGEEEKEGKEMA
ASVALAQSSISTLVSPSELVIPDDDVLSRDGEGKGGRQEGLALRPVGDPL
ASKEEGDEQGTPRSPLPFVDAASALLRAQGVTSPFQGGPRGEEVEGEGMR
TVAKKAAAAVAEKVVEELLSHAMEGETVLEEVNDEGEEEGDEMEQGGKEE
EERMEGYSSSSGSSSGSSSIIISSTGTGGTSSTSASTNSVVSSSYPPPPS
PPSTSPCPTAVRSGIGGSRQQCALPDHRVQAGCTSVVALLVDNDLVVANA
GDSRAVLCRKGTAIALSEDHKPLQDRELERIRRAGGFVTEQGRVNGNLNL
SRSIGDLKYKGNTALPAKDQMISAEPDLARISLTPDDEFLVLACDGVWDC
MTNQECVDFVRSRLQARREEGREGEPLSRVAGEVVDACLADDPRKTTGIG
GDNMTCLIVQVDERVRGKRGG*

Synonyms

Publications