NO06G04170, NO06G04170 (gene) Nannochloropsis oceanica

Overview
NameNO06G04170
Unique NameNO06G04170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3913
Alignment locationchr6:1161966..1165878 +

Link to JBrowse

Properties
Property NameValue
DescriptionCOP9 signalosome complex subunit 5a
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1161966..1165878 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
GO:0008180COP9 signalosome
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0005515protein binding
GO:0004222metalloendopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR037518MPN
IPR037740CSN5
IPR000555JAMM/MPN+_dom
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Homology
BLAST of NO06G04170 vs. NCBI_GenBank
Match: CBJ27075.1 (COP9 signalosome complex subunit 5a [Ectocarpus siliculosus])

HSP 1 Score: 434.1 bits (1115), Expect = 4.600e-118
Identity = 215/352 (61.08%), Postives = 258/352 (73.30%), Query Frame = 0
Query:   39 SAQARDGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRPDVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGLPALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVV 391
            S  +RD  Y+F+E++LE     K W QDPKYFKKV++SPSAAMKMLMHA  GVEKGM A GGKPVE+MG+M+GRPD E+ N L+VTDVFPLPVEGAET+VLADD EV NYMI LG+ LE TRKERFMGWYHSHPF VEVHS+CFLSSTD+ TQL+WQR  D    PWLAIVVDPLR+LAK++PEFGA+RVYPPE+ AP N+TPDGKIVT+D+ RVE WG+CWNRYY +E+EYFMSSLA D++  LT N+LWM  L +TP LESEN E+ SERI  VA+K+E C        G      SG                       A+++ T  S E+A+E CQGQ +Q+ K +V
Sbjct:   22 SKDSRDSLYSFDEAKLELTRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGM-AAGGKPVEIMGMMLGRPDTETANALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNETPDGKIVTDDSQRVELWGACWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILESENRERFSERIGNVADKVEHCDVHMNHGAGTSV---SG--------YLVADSAASKPKEESAISKATHGSSELAIEHCQGQMTQITKSIV 361          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: OQR86968.1 (COP9 signalosome complex subunit 5 [Achlya hypogyna])

HSP 1 Score: 423.3 bits (1087), Expect = 8.200e-115
Identity = 214/356 (60.11%), Postives = 255/356 (71.63%), Query Frame = 0
Query:   40 AQARDGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP--DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGL-PALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVVMN 393
            A + DG Y +NE RL EV A K WSQDPKYF++V++SP+A MKML HA  GVEKGM +PGGKPVEVMGL++GRP  D  + NTLVVTD FPLPVEGAETRVLADD EV NYMISLGE++E TRKE+FMGWYHSHPF VEV S+CFLSSTD+ TQL WQR  D    PWLAIVVDPLR+LAK +PE GA+R YPPEY  P N+TPDG +VT+DTARVERWGSCWNRYY LEVEYFMS+L  ++LS LT  +LWM  L++TP LE EN E+ SERI  +A KLE C  +     G   A + SG                       AL +  +++ E++LE C GQ  Q+AK ++ N
Sbjct:   23 ANSGDGLYAWNEDRLNEVRANKLWSQDPKYFRRVQVSPAATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLLGRPSTDPANLNTLVVTDAFPLPVEGAETRVLADDAEVINYMISLGEAIETTRKEKFMGWYHSHPFDVEVLSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVVDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGTLVTDDTARVERWGSCWNRYYALEVEYFMSTLGSNVLSVLTEKFLWMRTLSSTPMLERENRERFSERIGALATKLEGCEAAVASHKGFGSARMSSG--------YYVPDSSKAAAAEDSALDKCAQAAAELSLEHCHGQTLQVAKQMIFN 370          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: XP_012205145.1 (hypothetical protein SPRG_10630 [Saprolegnia parasitica CBS 223.65] >KDO24201.1 hypothetical protein SPRG_10630 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 419.5 bits (1077), Expect = 1.200e-113
Identity = 208/351 (59.26%), Postives = 250/351 (71.23%), Query Frame = 0
Query:   44 DGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP--DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGLPALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVVMN 393
            D  Y++++ RL EV   K WSQDPKYF++V++SP+A MKML HA  GVEKGM +PGGKPVE+MGL++GRP  D  SPNTLVVTD FPLP+EGAETRVLADD EV NYMISLGE+ E+TRKE+FMGWYHSHPF VEV S+CFLSSTD+ TQL WQR  D    PWLAIVVDPLR+LAK +PE GA+R YPPEY  P N+TPDG +VT+DTARVERWGSCWNRYY LEVEYFMSSL  ++LS LT  +LWM  L++TP LE EN E+ SERI  +A KL+ C      Q G       G                       AL + T+++ E+++E C GQ  Q+AK  + N
Sbjct:   24 DALYSWSDDRLSEVRGNKLWSQDPKYFRRVQVSPAATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLMGRPSTDPSSPNTLVVTDAFPLPIEGAETRVLADDAEVINYMISLGEATEITRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVVDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGTLVTDDTARVERWGSCWNRYYALEVEYFMSSLGSNVLSVLTEKFLWMRTLSSTPMLERENRERFSERIALLATKLDGCESMVSSQRGF------GSSRMSSGYYVPDSSKAAPATEDSALDKCTQAANELSMEHCHGQTLQVAKQKLFN 368          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: XP_008617615.1 (hypothetical protein SDRG_13313 [Saprolegnia diclina VS20] >EQC28976.1 hypothetical protein SDRG_13313 [Saprolegnia diclina VS20])

HSP 1 Score: 418.7 bits (1075), Expect = 2.000e-113
Identity = 207/351 (58.97%), Postives = 250/351 (71.23%), Query Frame = 0
Query:   44 DGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP--DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGLPALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVVMN 393
            D  Y++++ RL EV   K WSQDPKYF++V++SP+A MKML HA  GVEKGM +PGGKPVE+MGL++GRP  D  SPNTLVVTD FPLP+EGAETRVLADD EV NYMISLGE+ E+TRKE+FMGWYHSHPF VEV S+CFLSSTD+ TQL WQR  D    PWLAIV+DPLR+LAK +PE GA+R YPPEY  P N+TPDG +VT+DTARVERWGSCWNRYY LEVEYFMSSL  ++LS L+  +LWM  L++TP LE EN E+ SERI  +A KLE C      Q G       G                       AL + T+++ E+++E C GQ  Q+AK  + N
Sbjct:   24 DALYSWSDDRLSEVRGNKLWSQDPKYFRRVQVSPAATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLMGRPSTDPSSPNTLVVTDAFPLPIEGAETRVLADDAEVINYMISLGEATEITRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGTLVTDDTARVERWGSCWNRYYALEVEYFMSSLGSNVLSVLSEKFLWMRTLSSTPMLERENRERFSERIALLATKLEGCESMVSSQRGF------GSSRMSSGYYVPDSSKSAPASEDSALDKCTQAANELSMEHCHGQTLQVAKQKLFN 368          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: XP_009831561.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV78842.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 414.8 bits (1065), Expect = 2.900e-112
Identity = 203/356 (57.02%), Postives = 257/356 (72.19%), Query Frame = 0
Query:   39 SAQARDGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP--DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGLPALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVVMN 393
            +A++ D  YT+NE R+ EV + K WS DPKYF++V++SPSA MKML HA  GVEKGM +PGGKPVE+MGL++GRP  D  + NTL+VTD FPLP+EGAET+VLADD EV NYMISLGE++E TRKE+FMGWYHSHPF VEV S+CFLSSTD+ TQL WQR  D    PWLAIV+DPLR+LAK +PE GA+R YPPE+ AP N+TPDG+IVT+DTARVERWGSCWNRYY LE+EYFMS+L  ++L  L+  +LWM  L++TP LE EN E+ SERI  +A KL+ C  S     G  + +  G                       AL + T+++ E+++EQ  GQ  Q+AK ++ N
Sbjct:   27 NAKSGDSLYTWNEDRVNEVRSNKQWSHDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLLGRPSTDPANLNTLIVTDAFPLPIEGAETKVLADDQEVMNYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPVNETPDGQIVTDDTARVERWGSCWNRYYALEIEYFMSTLGANVLGVLSEKFLWMRTLSSTPTLERENRERFSERIGGLATKLDGCEASVGNAKGYSSRMNFG------YYVPDTLKTAAASNEDSALDKCTQAANELSIEQLHGQTMQVAKQILFN 376          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: XP_008878165.1 (hypothetical protein H310_12752 [Aphanomyces invadans] >ETV93143.1 hypothetical protein H310_12752 [Aphanomyces invadans])

HSP 1 Score: 414.5 bits (1064), Expect = 3.800e-112
Identity = 202/356 (56.74%), Postives = 256/356 (71.91%), Query Frame = 0
Query:   39 SAQARDGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP--DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGLPALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVVMN 393
            +A++ D  Y +NE R+ E+   K WSQDPKYF++V++SPSA MKML HA  GVEKGM +PGGKPVEVMGL++GRP  D  + NTL+VTD FPLP+EGAET+VLADD EV NYMI+LGE++E TRKE+FMGWYHSHPF VEV S+CFLSSTD+ TQL WQR  D    PWLAIV+DPLR+LAK +PE GA+R YPPE+ AP N+TPDG+IVT+DTARVERWGSCWNRYY LE+EYFMS+L  ++L  L+  +LWM  L++TP LE EN E+ SERIV +A KL+ C  S       P+ +  G                       AL + T+++ ++++EQ  GQ  Q+AK  + N
Sbjct:   27 NAKSGDNLYAWNEDRVNEIRTNKQWSQDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLLGRPSTDPANLNTLIVTDAFPLPIEGAETKVLADDQEVMNYMITLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPVNETPDGQIVTDDTARVERWGSCWNRYYALEIEYFMSTLGANVLGVLSEKFLWMRTLSSTPTLERENRERFSERIVGLATKLDGCDASVSHTKSYPSRMNLG------YYVPDAIKPSAAANEESALDKCTQAANDLSIEQLHGQSLQVAKQFLFN 376          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: OQS06928.1 (COP9 signalosome complex subunit 5 [Thraustotheca clavata])

HSP 1 Score: 409.1 bits (1050), Expect = 1.600e-110
Identity = 208/356 (58.43%), Postives = 252/356 (70.79%), Query Frame = 0
Query:   40 AQARDGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP--DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGL-PALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVVMN 393
            + A DG Y +NE RL EV A K W+QDPKYF++V++SPSA MKML HA  GVEKGM +PGGKPVEVMGL+IGRP  D  + NTL+VTD FPLPVEGAETRVLADD EV NYMISLGE++E TRKE+FMGWYHSHPF VEV S+CFLSSTD+ TQL WQR  D    PWLAIV+DPLR+LAK +PE GA+R YPPEY  P N+TPDG+  T+ TARVERWGSCWNRYY LE++YFMSSL  ++LS L+  +LWM  L++TP LE EN E+ S+RI  +A KL  C      Q     A + SG                       AL + T+++ E+++E CQGQ  Q+AK  + N
Sbjct:   19 SNAGDGLYLWNEERLNEVRANKLWTQDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLIGRPSTDPNNLNTLIVTDAFPLPVEGAETRVLADDAEVINYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGQ--TDSTARVERWGSCWNRYYALEIQYFMSSLGSNVLSVLSEKFLWMRTLSSTPMLERENRERFSDRIGLLANKLHGCETLISSQKNFGSARMSSG-------YYVPDTSKTTSSTEESALDKCTQAANELSIEHCQGQALQVAKQTIFN 365          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: XP_009831560.1 (hypothetical protein H257_07668 [Aphanomyces astaci] >ETV78841.1 hypothetical protein H257_07668 [Aphanomyces astaci])

HSP 1 Score: 403.7 bits (1036), Expect = 6.700e-109
Identity = 203/374 (54.28%), Postives = 257/374 (68.72%), Query Frame = 0
Query:   39 SAQARDGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP--DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWN------------------RYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGLPALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVVMN 393
            +A++ D  YT+NE R+ EV + K WS DPKYF++V++SPSA MKML HA  GVEKGM +PGGKPVE+MGL++GRP  D  + NTL+VTD FPLP+EGAET+VLADD EV NYMISLGE++E TRKE+FMGWYHSHPF VEV S+CFLSSTD+ TQL WQR  D    PWLAIV+DPLR+LAK +PE GA+R YPPE+ AP N+TPDG+IVT+DTARVERWGSCWN                  RYY LE+EYFMS+L  ++L  L+  +LWM  L++TP LE EN E+ SERI  +A KL+ C  S     G  + +  G                       AL + T+++ E+++EQ  GQ  Q+AK ++ N
Sbjct:   27 NAKSGDSLYTWNEDRVNEVRSNKQWSHDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLLGRPSTDPANLNTLIVTDAFPLPIEGAETKVLADDQEVMNYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPVNETPDGQIVTDDTARVERWGSCWNRYCTQVLVGDDSTRLFVIRYYALEIEYFMSTLGANVLGVLSEKFLWMRTLSSTPTLERENRERFSERIGGLATKLDGCEASVGNAKGYSSRMNFG------YYVPDTLKTAAASNEDSALDKCTQAANELSIEQLHGQTMQVAKQILFN 394          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: XP_009831562.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >ETV78843.1 hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 403.3 bits (1035), Expect = 8.700e-109
Identity = 189/288 (65.62%), Postives = 231/288 (80.21%), Query Frame = 0
Query:   39 SAQARDGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP--DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCS 325
            +A++ D  YT+NE R+ EV + K WS DPKYF++V++SPSA MKML HA  GVEKGM +PGGKPVE+MGL++GRP  D  + NTL+VTD FPLP+EGAET+VLADD EV NYMISLGE++E TRKE+FMGWYHSHPF VEV S+CFLSSTD+ TQL WQR  D    PWLAIV+DPLR+LAK +PE GA+R YPPE+ AP N+TPDG+IVT+DTARVERWGSCWNRYY LE+EYFMS+L  ++L  L+  +LWM  L++TP LE EN E+ SERI  +A KL+ C  S
Sbjct:   27 NAKSGDSLYTWNEDRVNEVRSNKQWSHDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLLGRPSTDPANLNTLIVTDAFPLPIEGAETKVLADDQEVMNYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPVNETPDGQIVTDDTARVERWGSCWNRYYALEIEYFMSTLGANVLGVLSEKFLWMRTLSSTPTLERENRERFSERIGGLATKLDGCEAS 314          
BLAST of NO06G04170 vs. NCBI_GenBank
Match: GAX97407.1 (COP9 signalosome complex subunit 5, putative [Pythium insidiosum])

HSP 1 Score: 389.8 bits (1000), Expect = 1.000e-104
Identity = 197/355 (55.49%), Postives = 245/355 (69.01%), Query Frame = 0
Query:   44 DGWYTFNESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGGKPVEVMGLMIGRP------DVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMISLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDAKDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDTARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLESENAEQLSERIVTVAEKLEQCSCSNYPQPGLPALLGSGEDXXXXXXXXXXXXXXXXXXXXGALARVTRSSCEIALEQCQGQQSQLAKHVVMN 393
            D  Y  ++  L+EV   K W QDPKYFKKV +SPSAAMKM+ HA  GVEKG+KA GGKPVE+MGLM+GRP      DV    TL+VTD FPLP+EGAETRVLADD EV NYMISLGE++EMTRKERFMGWYHSHPF VEVH++C+LSSTDV TQL WQR  D    PWLAIV+DPLR+LAK +PE GA+RVYPPEYTAP N+TPDG IVT+D+AR+ERWGSCWNRYY LEV+YFMSS+  D+++ L+  +LWM  L++    E EN ++ SERI  ++ KL+ C     P+                                  L ++ +++ E+++E   GQ+ QLAK  + N
Sbjct:   20 DAAYGVDDDVLKEVRNNKVWMQDPKYFKKVIVSPSAAMKMMNHAHSGVEKGIKA-GGKPVEIMGLMLGRPSTGTDRDVGDAQTLIVTDCFPLPIEGAETRVLADDAEVINYMISLGEAVEMTRKERFMGWYHSHPFDVEVHTHCYLSSTDVSTQLQWQRSEDPNGNPWLAIVLDPLRSLAKKRPEMGAFRVYPPEYTAPVNETPDGTIVTDDSARIERWGSCWNRYYTLEVDYFMSSVGSDIVNILSEEFLWMRTLSSNSMQERENRDRFSERIQLLSSKLDGCESLLAPR-----------TRNTRIGDYYVPEKQTKDSEDSVLDKIAQAANELSIEHSHGQELQLAKKALFN 362          
The following BLAST results are available for this feature:
BLAST of NO06G04170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ27075.14.600e-11861.08COP9 signalosome complex subunit 5a [Ectocarpus si... [more]
OQR86968.18.200e-11560.11COP9 signalosome complex subunit 5 [Achlya hypogyn... [more]
XP_012205145.11.200e-11359.26hypothetical protein SPRG_10630 [Saprolegnia paras... [more]
XP_008617615.12.000e-11358.97hypothetical protein SDRG_13313 [Saprolegnia dicli... [more]
XP_009831561.12.900e-11257.02hypothetical protein, variant 1 [Aphanomyces astac... [more]
XP_008878165.13.800e-11256.74hypothetical protein H310_12752 [Aphanomyces invad... [more]
OQS06928.11.600e-11058.43COP9 signalosome complex subunit 5 [Thraustotheca ... [more]
XP_009831560.16.700e-10954.28hypothetical protein H257_07668 [Aphanomyces astac... [more]
XP_009831562.18.700e-10965.63hypothetical protein, variant 2 [Aphanomyces astac... [more]
GAX97407.11.000e-10455.49COP9 signalosome complex subunit 5, putative [Pyth... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04170.1NO06G04170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04170.1NO06G04170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04170 ID=NO06G04170|Name=NO06G04170|organism=Nannochloropsis oceanica|type=gene|length=3913bp
ATGGTCACAGGTGGGGCTGCTGCCGCCTCTTCCTCTTCTTCGACGGATGC
GTCGAGTAGCAGCAGTAATACGGCTCCTCCAGTGCCCCCGGGAGATGCTG
CCGCCTCAGgtgaggatggtggggacatgaaaagggagggggaggttcca
attcccttcagggttagggttggaggggggggggggaagaggcttagccg
gcacgcatttgacatgcataggctgttgtggatattggtgcattagatgg
atctggttggaccgggaatctgaggggggatggggacgatggaaagaaaa
taaggaggggggtagagcaccaacgtctgaacattcaccccgctacatat
actactccctttatcccctctccccttttccttcttatcgtggaatagAC
ATGTCCGCGCAGGCTCGAGATGGCTGGTATACATTCAACGAGAGCCGGTT
GGAGGAAGTGATGGCGGCCAAGGCCTGGAGCCAAGAgtgcgtcgacgggc
aggggaagggagggagggagggagggaaggagggaaggaggggaggcggg
aagacacatggctgatgctacataggatcctgattgtttctccttcttat
gcgcacttctctacctccctccttttctccctctccctacgtcaacagCC
CCAAGTATTTTAAGAAGGTTCGCCTTTCCCCCTCGGCGGCGATGAAGATG
CTCATGCATGCTTGTGGAGGGGTGGAGAAGGGAATGAAGgtgaggaggag
ggaggggttgggggagggaaagagagacggggagagggatgggaggaggg
aagacggctagggatgatgaggggggggaggaggagacgcaagaagggag
gaaaaaaagggcataagagccggagggagggagggggtggtcaaacgagg
gaggggagaagggaagaagggagagagggaggggaaggcggtcatatcaa
agcacttctctcacacacacgtccgtttgtcgtcactttgtctttcgcag
GCCCCGGGGGGGAAGCCTGTTGAAGTGATGGGCCTCATGATTGGTCGCCC
GGACGTGGAGAGCCCGgtgggtgctgagggagggagggagggagggaggg
agggagggaggggaagggaagatggctcggatcagtaggcaataaaagag
ggagggaaagagggaggaagggaagaggtgcacaattcctatacttatgt
cccacatcccttgatgtcaaacgcctccattctttaagccctttaatcct
cctggtgtgatgtccatgccctccctccctccctccctcccttcctccct
ctttagAACACTTTGGTGGTGACGGACGTATTCCCGCTCCCTGTGGAAGG
GGCTGAAACGCGCGTATTGGCCGATGATACGGAGGTGCAAAATTACATGA
TCAGCCTTGGAGAGAGCTTGGAGATGgtgagagggagggagggagggagg
gagggacgaaggggaagcaggtggggtaggggggagggaaggagagaggt
agggagggagggagggagggagggagaagcaggcagctgggttctgacac
ttccatacacatgccttaataaatgctacgcatgcacttcgaaccgaaac
agACCCGGAAGGAGAGGTTTATGGGGTGGTACCACTCGCACCCTTTCTCA
GTCGAGgtacgtcccaccctccctccctccctccctccctccctccctcc
ctccctccctctttcccatccagtatactctggttgctctttccccctcc
cttcccctcctcccttcctcggtcccttcctccttccctccccccccaat
caggtgcactccaattgcttcctcttccgtactgacgtacctccctcttt
ccctccctccctccttccctccctccctccctctcccaatatcagGTGCA
CTCCAATTGCTTCCTCTCCTCCACTGACGTTCAGACGCAGCTGGCCTGGC
AGCGCTTCACTGATGCCAAGgtacgacccctccctccctccctccctccc
tccctccctccctccctagggttgtccccgactcgaacaaccactgtcgt
caactccctccctccctccctccctccctccctccctccctccctccctc
cccagGACTGTCCCTGGCTTGCCATCGTTGTGGACCCCCTCCGAGCCCTC
GCTAAGAACAAGCCCGAATTCGGCGCCTACCgtacgtgccctccctccct
ccctccctccctccctctccatccttcctcaaaccctcattctccctccc
tcccgcccttttgccctaccctttcatcttcaacacctgaccctccctcc
ctccctccctccctccctccctccctccctcccttcccagGGGTCTATCC
CCCCGAGTACACGGCACCCGCCAACCAGACGCCGGACGGAAAGATCGTGA
CCAACGACACGGCCCGCGTCGAGCGCTGGGGCTCTTGCTGGAATCGgtag
ggagggagggagggagggagggagggagggagggaggcatggtaataaac
aattaccgaacttggacctctgtcgagtatcccctctcacattcctccct
ttttccctccctccctccctccctccctccctccctccctccctccccag
GTACTACGAGCTGGAGGTGGAGTACTTCATGTCCTCGTTGGCCCTTGACC
TCCTCTCGACTCTCACCCGGAACTATCTGTGGATGACGCCCCTGACCACC
ACGCCGCAGCTCGAGAGCGAGgtagggaaggagggagggagtgaggaagg
gaaggagggagggagggagggtaagggtagctgtctagtcgcctttctga
ctccaaacgcactttaataagacgcacctccgctctggtccctcttcccc
tccctctctccctccctccgtccctgcctccctccctccctacttccctc
ccttcctccctccagAATGCCGAGCAGCTGTCGGAGCGCATTGTCACGGT
GGCCGAGAAGCTGGAGCAGTGCTCGTGCTCGAACTACCCACAACCCGgta
tgcaggaaagagggagggagggagggagggagggaaggagggagggaggg
agggagggagggagagggtgtgaaaggatctactgcttgtttcaatgctg
aggagagggagggagggagggggggaggacgggagtgctcgggccaaaag
attcctctagggttagtacctgacagtatgagtatcccaaagttcttggc
ctcctgttattcctaattttgtctggtttcctcctttttttctcatgtcg
tctttcctccccctcttctctctcatgctctctgtgcagGCCTGCCAGCT
TTACTCGGCTCGGGGGAGGACACCAGCACCGGCGGCGGAGGGGGGGGGGG
AAGGGGGGGAGGAGGAGGGAAAGGAGAGAAGGGGGCGCTGGCCAGGGTGA
CTCGGAGCAGgtaagaaaacagacaacaggcagacccctcccgcaatcgc
ttcctcccccccctcctccctctgtctttgccccctgctcttgcctcttc
ctgaagtcagtggcaaggatactcccaccctctcgcctttcctccctccc
gtccctccctcccgtccctccctcccgtccctccctccctccctccctcc
cgtccctccctccctccctccctccttccatgtgcctaccctgggaagag
ccaacagcagccataaattacaaggggcatggcccctcgctctctccttc
cctcccttcatccttccctccctccatcccttctttcctctctcaccgca
aggtctttgccaatgccaagtgtaagtctcattcgccccttttcccctcc
ctccctccctccctccctccctcccttttattgctagCTGCGAGATCGCG
TTGGAGCAATGCCAAGGACAGCAGTCGCAGTTGGCGAAGCACGTGGTCAT
GAATCAGCTTTAA
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protein sequence of NO06G04170.1

>NO06G04170.1-protein ID=NO06G04170.1-protein|Name=NO06G04170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MVTGGAAAASSSSSTDASSSSSNTAPPVPPGDAAASDMSAQARDGWYTFN
ESRLEEVMAAKAWSQDPKYFKKVRLSPSAAMKMLMHACGGVEKGMKAPGG
KPVEVMGLMIGRPDVESPNTLVVTDVFPLPVEGAETRVLADDTEVQNYMI
SLGESLEMTRKERFMGWYHSHPFSVEVHSNCFLSSTDVQTQLAWQRFTDA
KDCPWLAIVVDPLRALAKNKPEFGAYRVYPPEYTAPANQTPDGKIVTNDT
ARVERWGSCWNRYYELEVEYFMSSLALDLLSTLTRNYLWMTPLTTTPQLE
SENAEQLSERIVTVAEKLEQCSCSNYPQPGLPALLGSGEDTSTGGGGGGG
RGGGGGKGEKGALARVTRSSCEIALEQCQGQQSQLAKHVVMNQL*
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Synonyms
Publications