NO06G03750, NO06G03750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03750 vs. NCBI_GenBank
Match: XP_008908296.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica INRA-310] >ETN06327.1 23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica INRA-310] >KUF95705.1 hypothetical protein AM588_10006425 [Phytophthora nicotianae] >KUG00795.1 tRNA (Uracil-5-)-methyltransferase [Phytophthora nicotianae]) HSP 1 Score: 273.5 bits (698), Expect = 2.300e-69 Identity = 186/528 (35.23%), Postives = 248/528 (46.97%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 + I SP EGYRNK EF+ G + E +P VGFRLG FR+G++ V + C+ + V +Q + +PVY+ GVWR +TVR+S TG+ +V V K + + E+R V+ L + L S+S ITS+F+ YEGLS P+ NDP+ H++G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ +GVG+ V+GIE+C+ A +DA+VNA N VQN +F+ SKAEDV+ +L RD HL+ A DPPR GLH LRALR CP V+R+VYVSCNPT SL RDAV LCGP ++ ++G +F PV A+PVDMFPHT HCE+I+VF+R Sbjct: 446 DSIHASPVTEGYRNKCEFSFGFDKEDKPCVGFRLGLFREGSVVVSKPD-ECINVSKEMKAVCAVMQN-ILETSDVPVYNVTTKSGVWRVLTVRQSVNTGELMVMVQVNPKDKTD-----EERAAVKDLVVK------------------------------RLTDESNSFK-------------------------------------ITSIFMQEYEGLSAPSDNDPVEHVYGNTKLEEYLLGMRFSVSPNAFFQVNTRGAEKLYSLVKQYANADEH---------TLLYDVCCGTGTIGICAS--------------KGVGK------------------------------VVGIEICKPATDDAKVNAVLNDVQNVSFVNSKAEDVMKDLLHKKRDESEQHLNRVVA-----------------------------------IVDPPRAGLHHQVLRALRACPPVERIVYVSCNPTNSLVRDAVTLCGPSTKSIQGQAFEPVHAVPVDMFPHTPHCEMIIVFDR 811
BLAST of NO06G03750 vs. NCBI_GenBank
Match: ETP40773.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica P10297]) HSP 1 Score: 273.5 bits (698), Expect = 2.300e-69 Identity = 186/528 (35.23%), Postives = 248/528 (46.97%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 + I SP EGYRNK EF+ G + E +P VGFRLG FR+G++ V + C+ + V +Q + +PVY+ GVWR +TVR+S TG+ +V V K + + E+R V+ L + L S+S ITS+F+ YEGLS P+ NDP+ H++G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ +GVG+ V+GIE+C+ A +DA+VNA N VQN +F+ SKAEDV+ +L RD HL+ A DPPR GLH LRALR CP V+R+VYVSCNPT SL RDAV LCGP ++ ++G +F PV A+PVDMFPHT HCE+I+VF+R Sbjct: 446 DSIHASPVTEGYRNKCEFSFGFDKEDKPCVGFRLGLFREGSVVVSKPD-ECINVSKEMKAVCAVMQN-ILETSDVPVYNVTTKSGVWRVLTVRQSVNTGELMVMVQVNPKDKTD-----EERAAVKDLVVK------------------------------RLTDESNSFK-------------------------------------ITSIFMQEYEGLSAPSDNDPVEHVYGNTKLEEYLLGMRFSVSPNAFFQVNTRGAEKLYSLVKQYANADEH---------TLLYDVCCGTGTIGICAS--------------KGVGK------------------------------VVGIEICKPATDDAKVNAVLNDVQNVSFVNSKAEDVMKDLLHKKRDESEQHLNRVVA-----------------------------------IVDPPRAGLHHQVLRALRACPPVERIVYVSCNPTNSLVRDAVTLCGPSTKSIQGQAFEPVHAVPVDMFPHTPHCEMIIVFDR 811
BLAST of NO06G03750 vs. NCBI_GenBank
Match: ETK82948.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica] >ETL36324.1 23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica] >ETP12635.1 23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica CJ01A1]) HSP 1 Score: 273.1 bits (697), Expect = 3.000e-69 Identity = 185/528 (35.04%), Postives = 248/528 (46.97%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 + I SP EGYRNK EF+ G + E +P VGFRLG FR+G++ V + C+ + V +Q + +PVY+ GVWR +TVR+S TG+ +V V K + + E+R V+ L + L S+S ITS+F+ YEGLS P+ NDP+ H++G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ +GVG+ V+GIE+C+ A +DA+VNA N +QN +F+ SKAEDV+ +L RD HL+ A DPPR GLH LRALR CP V+R+VYVSCNPT SL RDAV LCGP ++ ++G +F PV A+PVDMFPHT HCE+I+VF+R Sbjct: 454 DSIHASPVTEGYRNKCEFSFGFDKEDKPCVGFRLGLFREGSVVVSKPD-ECINVSKEMKAVCAVMQN-ILETSDVPVYNVTTKSGVWRVLTVRQSVNTGELMVMVQVNPKDKTD-----EERAAVKDLVVK------------------------------RLTDESNSFK-------------------------------------ITSIFMQEYEGLSAPSDNDPVEHVYGNTKLEEYLLGMRFSVSPNAFFQVNTRGAEKLYSLVKQYANADEH---------TLLYDVCCGTGTIGICAS--------------KGVGK------------------------------VVGIEICKPATDDAKVNAVLNDIQNVSFVNSKAEDVMKDLLHKKRDESEQHLNRVVA-----------------------------------IVDPPRAGLHHQVLRALRACPPVERIVYVSCNPTNSLVRDAVTLCGPSTKSIQGQAFEPVHAVPVDMFPHTPHCEMIIVFDR 819
BLAST of NO06G03750 vs. NCBI_GenBank
Match: ETO71542.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica P1976]) HSP 1 Score: 273.1 bits (697), Expect = 3.000e-69 Identity = 186/528 (35.23%), Postives = 248/528 (46.97%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 + I SP EGYRNK EF+ G + E +P VGFRLG FR+G++ V + C+ + V +Q + +PVY+ GVWR +TVR+S TG+ +V V K + + E+R V+ L + L S+S ITS+F+ YEGLS P+ NDP+ H++G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ +GVG+ V+GIE+C+ A +DA+VNA N VQN +F+ SKAEDV+ +L RD HL+ A DPPR GLH LRALR CP V+R+VYVSCNPT SL RDAV LCGP ++ ++G +F PV A+PVDMFPHT HCE+I+VF+R Sbjct: 454 DSIHASPVTEGYRNKCEFSFGFDKEDKPCVGFRLGLFREGSVVVSKPD-ECINVSKEMKAVCAVMQN-ILETSDVPVYNVTTKSGVWRVLTVRQSVNTGKLMVMVQVNPKDKTD-----EERAAVKDLVVK------------------------------RLTDESNSFK-------------------------------------ITSIFMQEYEGLSAPSDNDPVEHVYGNTKLEEYLLGMRFSVSPNAFFQVNTRGAEKLYSLVKQYANADEH---------TLLYDVCCGTGTIGICAS--------------KGVGK------------------------------VVGIEICKPATDDAKVNAVLNDVQNVSFVNSKAEDVMKDLLHKKRDESEQHLNRVVA-----------------------------------IVDPPRAGLHHQVLRALRACPPVERIVYVSCNPTNSLVRDAVTLCGPSTKSIQGQAFEPVHAVPVDMFPHTPHCEMIIVFDR 819
BLAST of NO06G03750 vs. NCBI_GenBank
Match: OWZ15341.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora megakarya]) HSP 1 Score: 271.2 bits (692), Expect = 1.200e-68 Identity = 191/532 (35.90%), Postives = 248/532 (46.62%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFERGEEE 844 + I SP EGYRNK EFT G + E +P +GFRLG FR+G++ V + C+ + V +Q V +PVY+ GVWR +TVR+S T +V MV+ A P E R A K+ VV +T NP ITS+F+ YEGLS P+ NDP+ H +G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ +GVG+ V+GIE+C+ A +DA VNA+ N VQN F+ SKAEDV+ +L RD HL+ A DPPR GLH LRALR+CP V+R+VYVSCNPT SL RDAV LCGP ++ ++G +F PV A PVDMFPHT+HCE+I+VF+R + E Sbjct: 422 DSIHASPVTEGYRNKCEFTFGFDKEDKPCLGFRLGLFREGSVVVSKPD-ECINVSNEMKAVCAVMQNIV-ETSDVPVYNVNTKAGVWRVLTVRQSVNTDDLMV--------------------MVQVNPANKTP------EERAA----VKDLVV------------KRLTDASNPFK------------------------------ITSIFMQEYEGLSAPSDNDPVEHAFGKTKLEEHLLGMRFSVSPNAFFQVNTHGAEKLYSLVKQYANADEH---------TLLYDVCCGTGTIGICAS--------------KGVGK------------------------------VVGIEICKPATDDAEVNATLNDVQNVTFVNSKAEDVMKDLLRKKRDENEKHLNRVVA-----------------------------------IVDPPRAGLHHQVLRALRSCPPVERIVYVSCNPTNSLVRDAVTLCGPSTKSIQGQAFEPVHAAPVDMFPHTQHCEMIIVFDRVKAE 791
BLAST of NO06G03750 vs. NCBI_GenBank
Match: XP_009525016.1 (hypothetical protein PHYSODRAFT_496969 [Phytophthora sojae] >EGZ22299.1 hypothetical protein PHYSODRAFT_496969 [Phytophthora sojae]) HSP 1 Score: 268.9 bits (686), Expect = 5.700e-68 Identity = 187/532 (35.15%), Postives = 246/532 (46.24%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFERGEEE 844 + I SP EGYRNK EF+ G + E +P VGFRLG FR+G++ V + CV + V +Q V L VYD GVWR +TVR+S TG+ + V + N G+ +E LL + +T + N ITS ++ YEGLS P+ NDP+ H++G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ +GV + V+GIE+C+ A +DA VNA N V+N +FI SKAEDV+ +L R+ HL+ A DPPR GLH + LRALR CP VQR+VYVSCNPT SL RDAV LCGP ++ ++G +F+PV A+PVDMFPHT HCE+I+VFER + E Sbjct: 443 DSIHASPVTEGYRNKCEFSFGFDKENKPCVGFRLGLFREGSVVVSKPD-ECVNVSSEMKAVCAVMQNIVETSEIL-VYDVTTKSGVWRVLTVRQSVNTGELMAMV------------------------------------QVNPAGKTPEERAALKDLLV------ERLTDENNSFK------------------------------ITSFYIQEYEGLSAPSDNDPVEHVFGKTKLEEHLLGMRFDVSPNAFFQVNTRGAEELYSLVKQHADADEH---------TLLYDVCCGTGTIGICAS--------------KGVAK------------------------------VVGIEICKPATDDAEVNAVLNDVKNVSFINSKAEDVMKDLLRRKREESEKHLNRVVA-----------------------------------IVDPPRAGLHHNVLRALRACPPVQRIVYVSCNPTNSLVRDAVMLCGPSTKGMQGEAFQPVHAVPVDMFPHTPHCEMIIVFERVKTE 812
BLAST of NO06G03750 vs. NCBI_GenBank
Match: POM73950.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora palmivora var. palmivora]) HSP 1 Score: 265.4 bits (677), Expect = 6.400e-67 Identity = 182/532 (34.21%), Postives = 243/532 (45.68%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFERGEEE 844 + I SP EGYRNK EF+ G + E +P +GFRLG FR+G++ V + C+ + V +Q + +PVY+ GVWR +TVR+S T + +V MV+ A P EE L T + + ITS+++ YEGLS P+ NDP+ H++G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ +GVG+ V+GIE+C+ A +DA VNA N V+N F+ SKAEDV+ +L RD HL+ A DPPR GLH LRALR CP V+R+VYVSCNPT SL RDAV LCGP ++ ++G +F PV A+PVDMFPHT HCE+I+VF+R + E Sbjct: 435 DSIHASPVTEGYRNKCEFSFGFDNEDKPCIGFRLGLFREGSVVVSKPD-DCINVSNEMKAVCAVMQN-ILETSDVPVYNVNTKTGVWRVLTVRQSVNTDELMV--------------------MVQVNPANKTP-----------------EERAAVKDLVVKRLTDEGNSFK-----------------------------------ITSIYMQEYEGLSAPSDNDPVEHVFGKTKLEEHLLGMRFSVSPNAFFQVNTRGAEKLYSLVKQYANADEH---------TLLYDVCCGTGTIGICAS--------------KGVGK------------------------------VVGIEICKPATDDAEVNAVLNDVKNVTFVNSKAEDVMKDLLRKKRDENEKHLNRVVA-----------------------------------IVDPPRAGLHHQVLRALRACPPVERIVYVSCNPTNSLVRDAVTLCGPSTKSIQGQAFEPVHAVPVDMFPHTPHCEMIIVFDRVKAE 804
BLAST of NO06G03750 vs. NCBI_GenBank
Match: XP_024582710.1 (23s rrna (uracil-5-)-methyltransferase [Plasmopara halstedii] >CEG46341.1 23s rrna (uracil-5-)-methyltransferase [Plasmopara halstedii]) HSP 1 Score: 260.4 bits (664), Expect = 2.000e-65 Identity = 176/529 (33.27%), Postives = 246/529 (46.50%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFERGEEE 844 + I SP EGYRNK EF+ G + +P VGFRLG FR+G++ V + C+ + V +Q + G +PVYD GVWR +TVR+S T + +V ++ + + E+ + E + R +T ++N ITS+++ YEGLS P+ ND + H++G +EE LLG++F ISP+AFFQVNT GAE LY V + NE ++ DVCCGTGTIGIC + +GVGE ++GIE C+ A +DA VNA N V+N +F+ SKAE V+ ++L+ + E + L ++ DPPR GLH LRALR C V+R+VYVSCNPT SL RDAV LCGP ++ ++G +F+PV A+PVDMFPHT HCE+I+VF+R E E Sbjct: 444 DSIHASPVTEGYRNKCEFSFGFDKNNKPCVGFRLGLFREGSVVVSKPD-ECINVSKDMKAVCAVMQVILETSG-VPVYDVHTKTGVWRVLTVRQSINTEELMV----IVQVNPAQKTLEERAAVKELIVKR--------------------------------------LTDEENSFR------------------------------ITSIYVQEYEGLSAPSDNDSVEHVFGKTKLEEHLLGMRFSISPNAFFQVNTLGAEKLYTLVKQHANANEH---------TMLYDVCCGTGTIGICLS--------------QGVGE------------------------------IVGIETCKPATDDAEVNAELNNVKNVSFVNSKAEMVMKNLLQQKRG-------------------ENKQQLDRVVA-------------IVDPPRAGLHHQVLRALRACAPVERIVYVSCNPTNSLIRDAVTLCGPNTKSIQGQAFKPVYAVPVDMFPHTPHCEMIIVFDRVEAE 813
BLAST of NO06G03750 vs. NCBI_GenBank
Match: CBJ25817.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 255.4 bits (651), Expect = 6.600e-64 Identity = 221/750 (29.47%), Postives = 313/750 (41.73%), Query Frame = 0 Query: 82 PAAGQEEVLRLVVSGFQKFMNAKEVTKIMKHANIEYESLKRPMSTTVAILRFNSVAQRDKAAADLVGVNVKGRAVRTMVPVDEDRRIFNKQGQDRRGAKRGVGHEGGRDDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVEIVKTLAEVVTPLLSL-PYAEQLRQKEKDIALDCVGKMFREIKKSYEQKNKQLKR---AHQLGEGGSSDAARHVRAPDWA--WGNRYAKEVFVTEPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRS--QRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSS-----TKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVK 819 PA G EE+ ++ V K + KI+K+ +++Y+ K+ S T L F + QR A L + V R M V ++ N G RG KR +G D RG KT+A+ L + Y EQL KEK + D K+ I+ ++++ ++ KR Q G GG+ + +R P W + R F PI P+P EGYRNK EFT+ + +G T GFR G F+ G C + ++ + AF+ R P+YD +GVWR + RRS + G +V + K EE W +E+ +V+ L+A A GEEG T + SL++ Y GLS+P+ P+ LWG + +EE+LLGL+F ISP++FFQVNT GAE LY+ V++ ++ ++LDVCCG GTIGICAA +G KQ V G ++C A+EDAR NA NG+ N F+C KAE V+ + + H +S A +E A + AT DPPR+G+H CLR++R ++RLVYVSCNPTKSL DA LC P S+ G+ FRPVK Sbjct: 67 PAPG-EELTKVTVFNVGKHATLAQFEKILKNNSVQYKRAKKTPSITHGTLTFETAEQRAVAMEQLRKI-VGARGGELMFAVLARQKQNNDIG---RGNKRS-ARDGDDDGRGGDASKRPRQEAER-----------------------KTVAQATASLYGVKTYPEQLAFKEKTLMDDLFLKLPIVIRNEWDKRFREWKRNQGMKQGGGGGTLNKPAELRCPAWCRMFKRRDGTVPFDVSPIVPAPEPEGYRNKCEFTLSLSEDGLATAGFRAGRFQAGVPITVESPKDCPQVHGDMKKLCVQMDAFM-RSSPFPLYDDATKKGVWRLLVARRSAADKEGMAMVVINPTDVKDTEE-WKKEEERLVKELSA-------------GAQGEEG--------------------------------------------------------TKLVSLWVQEYAGLSSPDETSPMRLLWGKERLEEELLGLRFTISPNSFFQVNTKGAEALYKVVIENLELGDD---------AVVLDVCCGAGTIGICAAA---------------------------------AGGAKQ---------VYGSDICLPAIEDARRNALANGIDNCEFVCGKAEAVVAGQIANAFKQHKASLGAPAAGAGEEGSTASPAAAPAAT------------GELKFAAIVDPPRSGVHAKCLRSIRGTKAIKRLVYVSCNPTKSLAADATILCTPVSKSTTGLPFRPVK 653
BLAST of NO06G03750 vs. NCBI_GenBank
Match: CCI47583.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 243.4 bits (620), Expect = 2.600e-60 Identity = 167/530 (31.51%), Postives = 238/530 (44.91%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLS-NPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFERGEEE 844 E I SP EGYRNK EFT+G + EG P VGFRLG F++G++ V G C+ + P+ RV K +Q V P+++ + EGVW+ +TVR S RT Q +V + + Q+ ++ +++VGA +TS+++ Y+G S + + N+ L L G ++ E L L F ISP AFFQVNT AE+LY KV + + ++ L+ DVCCGTGTIG+C A E ++GIEMC++A EDA+ NA N + N +F+ KAE+V+ +L+ +A++ ++ V DPPR GLH LRALR C V+R+VYVSCNPT+SL +D+ LCGP + L G +FRPV+A VDMFPHT HCE+++VFERG + Sbjct: 422 ESIQASPETEGYRNKCEFTIGCDEEGHPCVGFRLGLFKNGSVTV-SKPGNCINVSPIMKRVCKVVQDMVIL-SEFPIFNVESREGVWKQLTVRHSARTQQLMVIFQLDLSSLDDSQQTTLQKFII--------------------------DKLVGA-------------------------------------------------LDVTSVYMQAYQGRSDSSDRNEALKLLRGNPFITEKLFDLDFNISPEAFFQVNTNAAEILYAKVREMIK---------VDKNTLLYDVCCGTGTIGLCCAKDAGE--------------------------------------------IIGIEMCKAATEDAKRNAILNHIDNISFVNGKAEEVMKDILQ----------TTQQDAQINAVTVVV------------------------DPPRAGLHFKVLRALRACSPVRRIVYVSCNPTQSLIQDSSMLCGPKTSALVGEAFRPVRAAAVDMFPHTPHCEMVVVFERGSSQ 787 The following BLAST results are available for this feature:
BLAST of NO06G03750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03750 ID=NO06G03750|Name=NO06G03750|organism=Nannochloropsis oceanica|type=gene|length=2710bpback to top protein sequence of NO06G03750.1 >NO06G03750.1-protein ID=NO06G03750.1-protein|Name=NO06G03750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=882bpback to top Synonyms
Publications
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