NO06G02180, NO06G02180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02180 vs. NCBI_GenBank
Match: EWM26237.1 (acyl- synthetase family member mitochondrial [Nannochloropsis gaditana]) HSP 1 Score: 462.2 bits (1188), Expect = 1.200e-126 Identity = 242/293 (82.59%), Postives = 261/293 (89.08%), Query Frame = 0 Query: 4 MLPRQALRHVSRSLVRAKPTSNCSTTAASNTSALMAR-------RCALQQSARSMASVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNISKEGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVIQGVENLKHIFLPLEPERSPLPAIQALVSDNTPLFLPVAADGSRGGSVLSHADVLSKQLWPVVSGVLNKKLVNVAAAAGGAN 290 MLPRQALR+VSR+LVR KPTS STT + MAR R LQQS RSMASVGALLD+ITFEIPLKEALQY KGKEKWTRADIKLAADGLAAGFLDLGL+PGDTIAAW+P DDADLH+TQFGAAKAGITLA+LDWNISKEGLEKTLL+TNA+ALIYAP R TDLTALLQS+IPELA+YDDG GVPFRSRKFPHLK+LVHTGFD+IQGVENLKHIFLPLEPERSPLPAIQALVSD+TPLFLPV ADGSR G++LSHADVLSK WPVVSGVL+KKLVNVAAAA G + Sbjct: 1 MLPRQALRNVSRNLVRNKPTSTSSTTRSCTMP--MARIGRSHDARLLLQQSVRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISKEGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVTADGSR-GAMLSHADVLSKNAWPVVSGVLSKKLVNVAAAAAGGS 290
BLAST of NO06G02180 vs. NCBI_GenBank
Match: CBJ26823.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 149.1 bits (375), Expect = 2.200e-32 Identity = 81/252 (32.14%), Postives = 144/252 (57.14%), Query Frame = 0 Query: 34 TSALMARRCALQQSARSMASVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNISKEGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVIQGVENLKHIFLPLEPERSPLPAIQALVSDNTPLFLPVAADGSRG----GSVLSHADVLSKQLWPVVSGVLNKKLVNV 282 T+A A L R + + + +D++ EIP+KEA++Y KG KWTR+D+K ++ LA G L+LG + GDT+A WLP + ++ H+ Q AA+ G+ +A +D + + +L+ + A++ +++ + +L+++ +PEL Y +G+PFRS K P L+ +HTG + + + + L P SPL + + ++ PL + ++G+ G G LSHA+V+S WP ++ +L K+ V V Sbjct: 39 TAAAAAGDMPLTTQGRFLGGLASKVDKVLAEIPMKEAVRYKKGNLKWTRSDVKSHSEALACGLLELGCKAGDTMAMWLP-ECSEKHVAQLAAARIGMVVAEVDPKLGSAAAVEKILEESGAAVVLV---EESVVPSLIEA-VPELRHYSTDSGLPFRSAKLPSLRLCIHTGLEREAALLHFRSALL-YTPPVSPLAQVNGQIKESAPLH-TIFSEGTGGTPEKGKTLSHAEVVSLASWPTIAAILKKEYVEV 283
BLAST of NO06G02180 vs. NCBI_GenBank
Match: OWZ21492.1 (hypothetical protein PHMEG_0003957 [Phytophthora megakarya]) HSP 1 Score: 137.9 bits (346), Expect = 5.000e-29 Identity = 79/220 (35.91%), Postives = 133/220 (60.45%), Query Frame = 0 Query: 49 RSMASVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNISK-EGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVIQGVENLKHIFLPLEPERSPLPAIQALVSDNTPL---FLPVAADGSRGGSVLSHADVLSK 265 R++++VGA+L++ +P KEAL+ K +W+ ++K A D LA GFLDL Q GD +A WLP + A+ +TQ AA+AG+TLA+++ +S+ + L L D+ A L++ P++ + T ++Q L PELAT+ + V FR + F HL ++ T ++ ++G+ NL + + PE L A+ ++SD TPL + V + +VL+H D+L + Sbjct: 17 RTVSTVGAILNEAVDRLPHKEALRSVKQDVRWSFKELKAAVDELANGFLDLQFQSGDVVAVWLP-NSAENVLTQLAAARAGLTLAVIEPEVSEAKELAFILEDSRASGLVFEPKQAGRNQTQVVQGLFPELATFRERKEV-FRPKHFRHLHSVITTSWEPVEGMINLNGMMVN-SPEPYALQAVTKMLSDKTPLAVTYSKVQGQNPKKSAVLTHGDLLKR 233
BLAST of NO06G02180 vs. NCBI_GenBank
Match: POM79208.1 (Hypothetical protein PHPALM_3162 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 136.3 bits (342), Expect = 1.500e-28 Identity = 80/222 (36.04%), Postives = 130/222 (58.56%), Query Frame = 0 Query: 47 SARSMASVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNIS-KEGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVIQGVENLKHIFLPLEPERSPLPAIQALVSDNTPL---FLPVAADGSRGGSVLSHADVLSK 265 SAR+ ++VGA LD+ +P KEAL+ K +W+ ++ A D LA GFLDL GD +A WLP + ++ +TQ AA+AG+TLA+++ +S E L L D+ A L++ P++ + T ++Q L+PELAT+ + V FR + F HL ++ T ++ ++G+ NL + + PE L A+ +SD TPL + V + +VL+H D+L + Sbjct: 16 SARAASTVGATLDEAVTRLPHKEALRSVKQDVRWSFKELNAAVDELANGFLDLQFNAGDVVAVWLPNNVENV-VTQLAAARAGLTLAVIEPEVSDAEELAFILDDSKASGLVFEPKQAGRNQTDIVQGLLPELATFRERQEV-FRPKNFRHLHSVITTSWEPVEGMINLNGMMVN-SPEPYVLKAVTKTLSDKTPLAVTYSKVEGQNPKKSAVLTHGDLLKR 234
BLAST of NO06G02180 vs. NCBI_GenBank
Match: POM78151.1 (Hypothetical protein PHPALM_4358 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 134.4 bits (337), Expect = 5.600e-28 Identity = 79/221 (35.75%), Postives = 129/221 (58.37%), Query Frame = 0 Query: 48 ARSMASVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNIS-KEGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVIQGVENLKHIFLPLEPERSPLPAIQALVSDNTPL---FLPVAADGSRGGSVLSHADVLSK 265 AR+ ++VGA LD+ +P KEAL+ K +W+ ++ A D LA GFLDL GD +A WLP + ++ +TQ AA+AG+TLA+++ +S E L L D+ A L++ P++ + T ++Q L+PELAT+ + V FR + F HL ++ T ++ ++G+ NL + + PE L A+ +SD TPL + V + +VL+H D+L + Sbjct: 17 ARAASTVGATLDEAVTRLPHKEALRSVKQDVRWSFKELNAAVDELANGFLDLQFNAGDVVAVWLPNNVENV-VTQLAAARAGLTLAVIEPEVSDAEELAFILDDSKASGLVFEPKQAGRNQTDIVQGLLPELATFRERHEV-FRPKNFRHLHSVITTSWEPVEGMINLNGMMVN-SPEPYVLKAVTKTLSDKTPLAVTYSKVEGQNPKKSAVLTHGDLLKR 234
BLAST of NO06G02180 vs. NCBI_GenBank
Match: XP_009534721.1 (hypothetical protein PHYSODRAFT_355815 [Phytophthora sojae] >EGZ09860.1 hypothetical protein PHYSODRAFT_355815 [Phytophthora sojae]) HSP 1 Score: 134.0 bits (336), Expect = 7.300e-28 Identity = 78/221 (35.29%), Postives = 131/221 (59.28%), Query Frame = 0 Query: 48 ARSMASVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNISK-EGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVIQGVENLKHIFLPLEPERSPLPAIQALVSDNTPL---FLPVAADGSRGGSVLSHADVLSK 265 AR+ ++VGA LD+ +P KEAL+ K +W+ ++ A D LA+GFLDL + GD +A WLP + A+ +TQ AA+AG+TLA+++ +S+ E L L D+ A L++ P++ + T ++Q L PELAT+ + V FR ++F HL ++ T ++ ++G+ NL + + E + A+ +SD TPL + V + +VL+H D+L + Sbjct: 17 ARAASTVGAALDEAVARLPHKEALRSVKQDVRWSFKELNAAVDELASGFLDLQFRAGDVVALWLP-NSAENVLTQLAAARAGLTLAVIEPEVSQAEELAFILHDSQAAGLVFEPKQAGRNQTEIVQGLFPELATFRERMEV-FRPKQFRHLHSVITTSWEPVEGMINLNGMMVN-NAEPYAMKAVTKTLSDKTPLAVTYSKVEGQNPKKSAVLTHGDLLKR 234
BLAST of NO06G02180 vs. NCBI_GenBank
Match: XP_002287027.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96668.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 132.9 bits (333), Expect = 1.600e-27 Identity = 90/269 (33.46%), Postives = 131/269 (48.70%), Query Frame = 0 Query: 27 STTAASNTSALMARRCALQQSARSMASV--GALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWN---------ISKEGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVI--QGVENLKHIFLPLEPERSPLPAIQALVSD-NTPLF--LPVAADG--SRGGSVLSHADVLSKQLWPVVSGVLNKK 278 S AA+N + RS+A+V G L ++ + P E ++Y KWT + +D LA G +D GLQPGD + +WLP A+ HI QF +KAG L LD N SK L K L TNA L DD + L + +IPE +D G+PF + ++PHL+F VHTG+ + +G+ KH +P S L D TPL L + DG ++ G VL++ +V + WP + +LN++ Sbjct: 35 SLAAATNGRGASPTGSTAAVTRRSVATVSAGDALARLATDHPHVEVIRYEHKNVKWTLKHVNYYSDALACGLVDAGLQPGDVVLSWLPLHFAEQHILQFACSKAGFLLYHLDPNPELAKSNPEQSKAALAKALELTNANVLFTQEAGDDVNYITLTEGVIPETRIFDFANGMPFFTPRYPHLRFPVHTGYSITDKEGMYAFKHFLVPSNNLDSLLRDTGCKELDGKTPLLGELVLGEDGIPTKTGKVLTNEEVFKSKAWPEFTSILNRE 303
BLAST of NO06G02180 vs. NCBI_GenBank
Match: XP_002180493.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47901.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27 Identity = 91/275 (33.09%), Postives = 147/275 (53.45%), Query Frame = 0 Query: 20 AKPTSNCSTTAASNTSALMARRCALQQSARSMA-SVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNI-------SKEGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDV--IQGVENLKHIFLP---LEPERSPLPAIQALVSDNTPLF--LPVAADG--SRGGSVLSHADVLSKQLWPVVSGVLNKK 278 ++ +S +T AA ++ AL + ++RS++ +VGA L +T E P + ++Y W+ ++ +D LA G ++ LQPGD + +WLP ++ + QF AK+G+ L LD + +KE L K L T A L+ +D + +L S+IPEL +D G+PF + +FPHL+F +HTGFD +G L+H+ +P LE P A +S +TPL L + ADG + G LS+ V+ ++WP + VL K+ Sbjct: 8 SRASSRAATLAARSSRALAP---TTRLASRSLSTAVGAQLQALTTEYPHLDVVRYEHKNRVWSLQHVQYYSDALAIGLMENNLQPGDVVLSWLPEHFSEQMVLQFACAKSGLVLYTLDPMLATTDREKAKEALAKALEITKANVLVSQEAGNDVNYISLGHSVIPELRIFDFSLGIPFITPRFPHLRFPIHTGFDQDDKEGWLPLRHMVVPSGNLETFVDP-----AKISKDTPLAGELLIGADGVPTGVGKTLSNEQVVKNKIWPTFAKVLAKE 274
BLAST of NO06G02180 vs. NCBI_GenBank
Match: XP_002998556.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69909.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 130.6 bits (327), Expect = 8.000e-27 Identity = 76/220 (34.55%), Postives = 126/220 (57.27%), Query Frame = 0 Query: 49 RSMASVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNISK-EGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVIQGVENLKHIFLPLEPERSPLPAIQALVSDNTPL---FLPVAADGSRGGSVLSHADVLSK 265 R+ ++VGA LD+ +P KEAL+ +W+ ++ + D LA GFLDL Q GD +A WLP ++ +T AA+AG+TLA+++ +SK E L L D+ A L++ P++ + T ++Q+L PELAT+ + V FR + F HL ++ T + ++G+ NL + + PE + A+ ++D TPL + V + +VL+H DVL + Sbjct: 18 RAASTVGATLDEAVARLPHKEALRSVTQDIRWSFKELNASVDELANGFLDLQFQRGDVVAVWLPNSVENV-LTHLAAARAGLTLAVIEPEVSKAEELAFILQDSKASGLVFEPKQAGRNQTEIVQNLFPELATFRERMEV-FRPKNFRHLHSVITTSWKPVEGMVNLNGMMVN-SPEPYAMKAVTKTLNDKTPLAVTYSKVEGQNPKKSAVLTHGDVLKR 234
BLAST of NO06G02180 vs. NCBI_GenBank
Match: ETI42221.1 (hypothetical protein F443_12619 [Phytophthora parasitica P1569] >ETM42110.1 hypothetical protein L914_12189 [Phytophthora parasitica]) HSP 1 Score: 130.2 bits (326), Expect = 1.000e-26 Identity = 75/220 (34.09%), Postives = 128/220 (58.18%), Query Frame = 0 Query: 49 RSMASVGALLDQITFEIPLKEALQYPKGKEKWTRADIKLAADGLAAGFLDLGLQPGDTIAAWLPGDDADLHITQFGAAKAGITLAMLDWNISK-EGLEKTLLDTNAKALIYAPQRDDTDLTALLQSLIPELATYDDGTGVPFRSRKFPHLKFLVHTGFDVIQGVENLKHIFLPLEPERSPLPAIQALVSDNTPL---FLPVAADGSRGGSVLSHADVLSK 265 R+ ++VGA LD+ +P KEAL+ +W+ ++ + D LA GFLDL Q GD +A WLP ++ +TQ AA+AG+TLA+++ +S+ E L L D+ A L++ P++ + T ++Q+L PELAT+ + V FR + F HL ++ T ++ ++G+ NL + + PE + A+ ++D TPL + V + +VL+H D+L + Sbjct: 18 RAASTVGATLDEAVARLPHKEALRSVTQDIRWSFKELNASVDELANGFLDLQFQRGDVVAVWLPNSVENV-LTQLAAARAGLTLAVIEPEVSEAEELAFILQDSKASGLVFEPKQAGRNQTEIVQNLFPELATFRERMEV-FRPKNFRHLHSVITTSWEPVEGMINLNGMMVN-SPEPYAMKAVTKSLNDKTPLAVTYSKVEGQNPKKSTVLTHGDLLKR 234 The following BLAST results are available for this feature:
BLAST of NO06G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02180 ID=NO06G02180|Name=NO06G02180|organism=Nannochloropsis oceanica|type=gene|length=1446bpback to top protein sequence of NO06G02180.1 >NO06G02180.1-protein ID=NO06G02180.1-protein|Name=NO06G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=290bpback to top Synonyms
Publications
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