NO06G02150, NO06G02150 (gene) Nannochloropsis oceanica

Overview
NameNO06G02150
Unique NameNO06G02150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5255
Alignment locationchr6:626670..631924 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:626670..631924 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR000357HEAT
Homology
BLAST of NO06G02150 vs. NCBI_GenBank
Match: EWM26198.1 (hypothetical protein Naga_100025g45 [Nannochloropsis gaditana])

HSP 1 Score: 500.7 bits (1288), Expect = 1.700e-137
Identity = 420/856 (49.07%), Postives = 472/856 (55.14%), Query Frame = 0
Query:  829 ASRLFLEGIFLTEGGPWHLPTGQAASTAARIEAEGGRXXXXXXXXXXXXXXXXXXXVRVGHGATIEGGGGRKGGRDEELARTRALPVGVLESNARLVALLVEGVGDCVEALSGRLAAV-ARRREKRGAGER-KGGKGVEARWAREQERYLMLSLYPLVEKLGDPHPLVRQAALTTLHRLARAHHHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGXXRGGE---VGALLATNLDYLVEALCARVRKSQGRGGRKGGGE-GISSFPLAPAVLEALIARAGPTASLALVRELARVVLDVVDVEGLTLGPQYVYGMMRALRVMSQAIPLP-------------------EGG-REGRVRKVPRATRVSAAVYWREKILGEFGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEGKLEIEKLFPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLILEIIERSCYFLAYPNLFIQHQSLAILRLSLLKLAPRRVVLLPTVHRVWPAIMARLRACVITINGPTRRRPGQHEEDLDRSAAYLLTIEALEMISSLAGLCGDFLSFKFTEELWPVLRALLQASASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEMALVRCLRQFMEAEDCYRYSVPLVHVIGQTCLFLLGRVEPESERGGEVMGLFEGLVRLDGAALWPLLMEAAGWDVSVRPPVRRAGKERGRVGGW--------RGEVERRRAQGHAEALLKRVEGKEEGREEMAWCV 1651
            ASRLFLE + LTEGG WHL TGQ  +        GGR                      G G         KG         R LP  VLE NARLVALLVEGVGDC EAL  +L  +  RRR  +GAGE          RW R  ER+LML L+PLVEKLGDPHP+V+QAALTTL+RLARA                                 G   + GE   VG LLA NLDYLVEALCA VRKSQGR  R G  E G  SFPLAP+VLEAL+A AG  ASLAL+RELARVVL+VVD+EGL  G +Y Y MMR LR M QA+PLP                   EGG RE R +KVP+ +RV AA YW+ KIL EF S++         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      IEKLFPE                          XXXXXXXXXXXXXXXXXXXXX LILEIIER CYFLAYP+LFIQHQSLA+LR +L +L+ RR+VLLPTVHRVWPA+MARLRAC  +I GP  RRPGQ E+D+D SAAYLL +E L+M++ LAGLCGD+LSFKFTEELWPVL+ LL ASA S                                                                                                AE ALV CL  F+ +ED +RY VPLVH IGQ+CLFLLG   P S   G+ + LF  L  LDGAALWPLLM AAGWDVS RPP +                    + +   + A+ HA+ LLK VE  E   EEMAWCV
Sbjct:   77 ASRLFLETLLLTEGGAWHLVTGQGLAWPDL----GGREGDSPSSSALAWRNVRLQPSGTGDGGMTIPAQTAKG--------QRTLPTEVLELNARLVALLVEGVGDCGEALYAQLVFLQERRRRTQGAGENXXXXXXXXGRWMRAWERFLMLCLFPLVEKLGDPHPVVQQAALTTLYRLARAQE---------TLVGQSAKERKGKEADTNVSRAGSRPQEGEEGVVGRLLAANLDYLVEALCAHVRKSQGRTSRSGSQEGGRLSFPLAPSVLEALVAYAGGQASLALIRELARVVLEVVDMEGLRCGHRYAYEMMRVLRAMGQAVPLPGDGPRSKDGEGAGVALEGGEGGRRENRAKKVPKVSRVPAAAYWKAKILAEFESSE----EGDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEKLFPE-------------ATKGAKEKETWEGXXXXXXXXXXXXXXXXXXXXXXLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDMDLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASAKS----------FHERRAGGPRAIRVSRMAGDASTASSSHVPALGQKGLVLPKQCPDQTALAETDNDRRGQLGGEPLWDGLNLHQGYRERERQTLQHRAEAALVHCLHSFVASEDAFRYCVPLVHEIGQSCLFLLG-CAPNSPSAGDALILFRALASLDGAALWPLLMAAAGWDVSFRPPRQGIXXXXXXXXXXXXXXXXXRKDKAGEKFARYHADILLKYVESGE--IEEMAWCV 881          
The following BLAST results are available for this feature:
BLAST of NO06G02150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26198.11.700e-13749.07hypothetical protein Naga_100025g45 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL090nonsL090Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR146ngnoR146Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000241NSK000241Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02150.1NO06G02150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631971gene_6528Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100025g45gene4290Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02150.1NO06G02150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02150 ID=NO06G02150|Name=NO06G02150|organism=Nannochloropsis oceanica|type=gene|length=5255bp
ATGGCCTCTTCCTCCTCCTCTGTCTTCGCCCATCTCCCCATCCCCCTGCA
AAGAGCGGTCATCGGCCTGATGATGCAGCTCCGACAGTCCGATCAGGCCC
AAATTGCGCAATTCCAAGCGCCTTTGGAGGCGTTGGCGGACGCGGTGACC
TTGCTCTCCGATGAAGAAGAAGCTGCAGATGCCGTCAGCCTTGTCCTCCT
TCCCGTCTACACCATCTTGACCCTCCCCTCATCCTCCGATACCAAGACAA
AGACAACTGACAAGGTAACGCCCACATCCCCATCTTTGACATCACTTCCA
CAAGTACAAAAGCATCCGCAGCCGCCGCAGCAGCAAGCCCATCGCACCCC
CGCAGAAGCCAAGGCTCTCGCTGCCGCCTTACGGTGTGTCAGCAGAATGG
CAAGCAAGTGCGGCTCGAGCGTCATTCGTGATGATCCCTCCATATACCTG
AAGATTTTGACCCAGTTGGTTATGTCGCTGGCTACATTAAGTAAGGAGGA
TTCAACAAAGCGCGTGGAGTGGTGGGTGGAGGAGAAGGCAGTGTTGGAGG
CCTTGCTGGCGTTGTTGCAGTGCTCGCCTCTGCACGGGGACGGAAGAGGA
CAGAGAAGAGAAGGAGAAGGAGGGGAAAATAAAAATATAAAAGAGAAGAA
GAGCGACAGGGAGGAGCCGGCGATACCGTCATTAGACGACTACCTCGATG
ACCTCGAGGAGGAGGACGATGACGCGAAGGAGGAAGCAAAGGCAGCAGCG
CTTCACAGACAAATGTTAGCCGAAGCCCATTGGAAGGAAGTGGCGCGGGC
ATTAGTTGGAGCTATCAGTGGTGCTATTGTCGCGCAACTTATCCAGGGTC
TGCTGGACGTGATTGCCCGAGATAGGAACAGGGACATGCGTTTGCTCGCG
TTATCTTGTTTGGACAACTTAATCATTCGGTTACTACCCTGTCCTGACGT
GTGGCGTCCGTTTTTCCCTGGGGTCTTCGGGGGATTGATCAAGGTGGTGC
TAGGGGATTACAAGCAGGGAAGTAGAGTGATGGCTGCTGCCTTGGAGGTA
CTGCTGGGGGTCACAGCCATGCTCGCGAATGTGAGGCTCGAAGCCACGGA
AGGGTTGGGTTGCAACAGCAGAAGTCTGCAGGGGCAGCAGGAGGAGGTAG
AGGGATTATTACCGAATGGAGAAGGAGGTGAAGGAGGAGGGACTGAGGCC
AAGCCTTCCTCTTCGTCGCTCTCCACCTGGCAGCAATTCAAAACCCACCT
CCTGTCCTCTTCCCCCTCCTCCGCCCCCTCCATCGCCTCCTCCCCCCCCC
AAAGCACCGgtatgtgtctatccctgtccctccccaaatccaagTCCACG
TCACCATGCAATGGGCGAGGGATCTGCAGAGGCGTCTGTCTGACTACCTG
CCTGTACTCCTCCGTGCTTGTCTCTCCAGCGAGTCGGTGAAAGTGAGAGA
AGTCTTAATAGACGGATTGGATCGCATGATTGCGGAGAACGATGACGAGA
AAGGGAGGGAGGAAGGCGGCACGATGAAAAACTTGTTTTTGGTCGATTTG
GAGGGTGAGGAGGAGGAGAGAAGGAGGGACCAGGGCGTAGCAGCAGTAGC
GGAGTTGTTGAGGGTAAGGGTGTTGGATGCTTTGGTTGCGTTGCGGGCAG
ATGATGCACCGACAGTAGAGAGGAAAGCGCAGAGAGTTCTCACTCACGTT
CTTGGCAATGGTAGCAGCAGCAGCACGAGCAGCAGCAGCACGAGCAGTAG
AGAGAGTCTTGTATCCAGGTCGCGTCTGCTGGATCGCGTGGAGGAGCTCC
TAGAGTGCCTGCCAGCAGTGGCAACAGCAGTGAGCGATGTTGGCCTGCGG
ACGACGCTTCGGCTCTTGAAGGGGTACCTTGACTTGTTGTTGGTGGgtgg
gagggagggagggagggagggggggtggtgtgtttgttgaggggggagaa
gatggagaagacgatgggggcgttgaaaatgtgcctggagGCGGAGCGGG
GAGGGGGGGATTGCAGGTTATCGATCCTTTGCCTTCTTTTTTGTCGGACA
CGAGAAGAAGGAGGAGGCAGGAGAAGAAACGGGAGGAGGAAGCAGACGGA
GCAGAAGGGGAGGATAATGGGGAGGAAGACGAAGGCGGGAAGAAGAAGGG
CCTTGGTGCGCTCAGACTCGCGGAGCAGCATCCAACGTCATTGCCTTCCG
TCTCTTCTGCCGCTGCTCCCGCGGGTCCGACGTCTTCCTCTACCTCGTCA
AGTCATACACTAGGCTACTACCGTCAATCGTTTCGACACGTTCGAAGCGA
GGCTGTGCTGGAGGACTGCAAGTCCATGCTCCGGTTGTTGGGGCATGGAG
GAATGAGGAGAAAAAGAAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGGG
GGGGGGGGCGGAAGTGGTTTACCTGgtagtgagctacgtgatgaatgagt
tgagaaaaggcgcgaaccaagcgaggcgatttccaagggatgacgggagg
gaaggggggcaggagggaggggaagagggggggaggggaggatgcagtgg
gcgctggaacggataccgttggtgtatattatgaaccagGTCACGCTTGG
ATGTGGGGAGAGAGAAGAGGAGGAGGAGGGGGAAGAGGAGAAGGAGGAGG
AGCTGAGGGAGGAAGGGGTGGAGGTGGACGAAAAGGAGGAGGAGGAAGAA
GAGGCCAGGCTTCGAACGTTGGGTGCGGCGTCCCGTCTCTTCCTAGAGGG
AATATTTTTGACGGAAGGGGGTCCTTGGCACCTACCCACGGGCCAAGCAG
CATCGACAGCAGCAAGGATAGAGGCAGAGGGAGGGAGACGAGGAGGAGGA
GGCGCAGGAGGAGTAGGAGGAGCAGGAGGAGCAGGAGTGGTGGCAGTGCG
TGTTGGGCATGGGGCGACGATAGAGGGAGGAGGAGGGAGGAAGGGAGGGA
GGGATGAGGAGCTGGCTAGGACTCGGGCTCTACCTGTGGGGGTTTTGGAG
AGCAATGCGCGCTTGGTGGCATTGCTAGTGGAGGGGGTGGGCGATTGTGT
GGAGGCCCTTTCGGGTCGTCTGGCGGCTGTGGCCAGGAGAAGGGAGAAAC
GGGGGGCGGGAGAGAGGAAAGGAGGGAAGGGGGTGGAAGCACGTTGGGCG
CGAGAGCAGGAGCGATATTTGATGCTGTCTCTTTATCCGTTGGTGGAAAA
ACTGGGTGATCCACACCCTCTTGTGCGACAAGCAGCTCTCACTACATTGC
ATCGCTTGGCACGCGCCCACCACCACCAGCACCAGCAGCAGCAGCACCAG
CAGCAACAACATACACAACAAAAGGTGGGACAAGAAAAGTCGGATATGAT
GAAAGCAGAAATTGGCGGTGGAGGAGGGAGAGGAGGCGAGGTAGGTGCGC
TATTAGCCACTAATCTGGATTATTTAGTCGAAGCCCTCTGTGCGCGGGTC
CGTAAATCCCAAGGAAGGGGAGGAAGAAAAGGAGGAGGAGAAGGTATTTC
CTCTTTTCCATTGGCACCGGCGGTGTTGGAAGCTTTGATAGCAAGGGCAG
GCCCAACAGCTTCCTTAGCCTTAGTAAGGGAACTGGCGCGAGTCGTCCTA
GATGTCGTAGACGTGGAAGGATTGACACTCGGGCCACAATATGTCTATGG
AATGATGCGCGCGTTAAGAGTGATGTCTCAAGCCATACCTTTGCCGGAGG
GGGGGAGGGAGGGAAGGGTGAGAAAGGTTCCCAGGGCCACCAGAGTATCG
GCGGCTGTCTATTGGAGAGAAAAGATCTTGGGGGAGTTTGGGTCTGCAAA
AAAGGAGAGGCAGAAGAAGGAGGAGGAGAAGGGAGGGAAGGAGGGAGTGG
TTGAGACGCCAGCGGTGGGGACGGAGGCCTTTTTCAAGGGGTATCATCGA
AAGAAAGAGGATGAGAAGAAGAAGGGAGAACAGGCGAGGAGGAAGGAGAT
GGAAGGCAAGTTGGAGATTGAAAAACTCTTTCCCGAGGCAGCGGCTGCCT
CTGCAACGAAAGAAAATAAAGAGAAGCGTACCGAGAATGGCATCTACTAT
GAGGAAGAGGACGAAGGGGGGCGGGGGCGAGAGGACGGAGACGACGACGG
GGAAGACGACAATCCTACAGTGGAAGAGAACCTCATTCTAGAAATAATCG
AACGCAGCTGCTACTTCCTCGCCTATCCCAATCTCTTCATCCAGCACCAG
TCCCTCGCCATCCTTCGCCTTTCTCTCCTCAAGCTCGCTCCTCGTCGAGT
CGTCCTCCTTCCCACCGTCCACCGTGTCTGGCCTGCCATCATGGCACGTC
TGCGTGCCTGCGTCATCACCATTAATGGCCCCACCCGTCGACGTCCCGGG
CAACACGAAGAGGATCTCGATCGCTCCGCTGCTTACTTATTGACAATCGA
AGCTTTAGAGATGATCTCGAGCCTCGCCGGGTTATGTGGAGATTTCTTAT
CCTTCAAATTCACGGAAGAGCTGTGGCCGGTGTTGAGAGCGTTGCTTCAA
GCCTCGGCGTCGTCAGTGGATGCAGCAGTAGCTGTCGGTAATAGTAGTGA
TGGTGATATGGGAAAGCGAGGACAAGGGCGGGGAGGAAGAGGGGCGGCGT
CCTCGTTGCTACTTCCTTCCCCGACGGGAGGGGGAAGAGGACGGGTTTTG
AATCGCGAGAGTTTGGTGGTGGTGGGAAGAGGACGAGGCACGAACGATAG
CTCTTTGGCTCCTGACACGCGGCAGCAAGAGGTGCCGTCGCCTAGCGCGC
TCCTCCTGCAACAACAGCAGCAAGAACAGGAACGTCTTGCCTTACACCTG
CGGGCCGAGATGGCGTTGGTAAGGTGCTTGCGTCAGTTTATGGAGGCAGA
GGATTGTTATCGTTACAGTGTCCCCCTCGTGCATGTGATCGGGCAGACAT
GTCTGTTTTTGCTGGGAAGGGTGGAACCAGAGAGTGAAAGGGGCGGGGAG
GTAATGGGACTGTTTGAAGGGCTGGTGCGTTTGGATGGAGCGGCGTTGTG
GCCATTGTTGATGGAGGCAGCGGGATGGGATGTGAGTGTGAGGCCGCCGG
TGAGGAGAGCAGGGAAGGAGCGTGGGAGGGTGGGTGGGTGGAGGGGGGAG
GTGGAGAGGAGGCGGGCACAGGGGCATGCGGAGGCGTTGTTGAAGAGGGT
GGAAGGCAAAGAGGAGGGAAGGGAGGAGATGGCATGGTGTGTCTTGACGG
ATTGA
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protein sequence of NO06G02150.1

>NO06G02150.1-protein ID=NO06G02150.1-protein|Name=NO06G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1654bp
MASSSSSVFAHLPIPLQRAVIGLMMQLRQSDQAQIAQFQAPLEALADAVT
LLSDEEEAADAVSLVLLPVYTILTLPSSSDTKTKTTDKVTPTSPSLTSLP
QVQKHPQPPQQQAHRTPAEAKALAAALRCVSRMASKCGSSVIRDDPSIYL
KILTQLVMSLATLSKEDSTKRVEWWVEEKAVLEALLALLQCSPLHGDGRG
QRREGEGGENKNIKEKKSDREEPAIPSLDDYLDDLEEEDDDAKEEAKAAA
LHRQMLAEAHWKEVARALVGAISGAIVAQLIQGLLDVIARDRNRDMRLLA
LSCLDNLIIRLLPCPDVWRPFFPGVFGGLIKVVLGDYKQGSRVMAAALEV
LLGVTAMLANVRLEATEGLGCNSRSLQGQQEEVEGLLPNGEGGEGGGTEA
KPSSSSLSTWQQFKTHLLSSSPSSAPSIASSPPQSTVHVTMQWARDLQRR
LSDYLPVLLRACLSSESVKVREVLIDGLDRMIAENDDEKGREEGGTMKNL
FLVDLEGEEEERRRDQGVAAVAELLRVRVLDALVALRADDAPTVERKAQR
VLTHVLGNGSSSSTSSSSTSSRESLVSRSRLLDRVEELLECLPAVATAVS
DVGLRTTLRLLKGYLDLLLVGGAGRGGLQVIDPLPSFLSDTRRRRRQEKK
REEEADGAEGEDNGEEDEGGKKKGLGALRLAEQHPTSLPSVSSAAAPAGP
TSSSTSSSHTLGYYRQSFRHVRSEAVLEDCKSMLRLLGHGGMRRKRRGGG
GGGGGGGGGGGGGGGGGGGGGGRGGGAEVVYLVTLGCGEREEEEEGEEEK
EEELREEGVEVDEKEEEEEEARLRTLGAASRLFLEGIFLTEGGPWHLPTG
QAASTAARIEAEGGRRGGGGAGGVGGAGGAGVVAVRVGHGATIEGGGGRK
GGRDEELARTRALPVGVLESNARLVALLVEGVGDCVEALSGRLAAVARRR
EKRGAGERKGGKGVEARWAREQERYLMLSLYPLVEKLGDPHPLVRQAALT
TLHRLARAHHHQHQQQQHQQQQHTQQKVGQEKSDMMKAEIGGGGGRGGEV
GALLATNLDYLVEALCARVRKSQGRGGRKGGGEGISSFPLAPAVLEALIA
RAGPTASLALVRELARVVLDVVDVEGLTLGPQYVYGMMRALRVMSQAIPL
PEGGREGRVRKVPRATRVSAAVYWREKILGEFGSAKKERQKKEEEKGGKE
GVVETPAVGTEAFFKGYHRKKEDEKKKGEQARRKEMEGKLEIEKLFPEAA
AASATKENKEKRTENGIYYEEEDEGGRGREDGDDDGEDDNPTVEENLILE
IIERSCYFLAYPNLFIQHQSLAILRLSLLKLAPRRVVLLPTVHRVWPAIM
ARLRACVITINGPTRRRPGQHEEDLDRSAAYLLTIEALEMISSLAGLCGD
FLSFKFTEELWPVLRALLQASASSVDAAVAVGNSSDGDMGKRGQGRGGRG
AASSLLLPSPTGGGRGRVLNRESLVVVGRGRGTNDSSLAPDTRQQEVPSP
SALLLQQQQQEQERLALHLRAEMALVRCLRQFMEAEDCYRYSVPLVHVIG
QTCLFLLGRVEPESERGGEVMGLFEGLVRLDGAALWPLLMEAAGWDVSVR
PPVRRAGKERGRVGGWRGEVERRRAQGHAEALLKRVEGKEEGREEMAWCV
LTD*
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Synonyms
Publications