NO06G01640, NO06G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01640 vs. NCBI_GenBank
Match: PHT98767.1 (60S ribosomal protein L9 [Capsicum chinense]) HSP 1 Score: 239.2 bits (609), Expect = 1.100e-59 Identity = 117/197 (59.39%), Postives = 153/197 (77.66%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+G+T+ +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH NLITGVTKG+ YKMRFVYAHFPIN S+T +K++E+RNFLGEK+VR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG IVE + Sbjct: 1 MKTILSSETMDIPDGITIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVANLITGVTKGYRYKMRFVYAHFPINASITGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_009602099.1 (PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] >XP_016443775.1 PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tabacum]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 118/197 (59.90%), Postives = 151/197 (76.65%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+GV + +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH ENLITGVTKG+ YKMRFVYAHFPIN S+T +K +E+RNFLGEKRVR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG I E + Sbjct: 1 MKTILSSETMDIPDGVKIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITGVNKAIEIRNFLGEKRVRKVDMLEGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIAEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_009619208.1 (PREDICTED: 60S ribosomal protein L9-1 [Nicotiana tomentosiformis] >XP_009803596.1 PREDICTED: 60S ribosomal protein L9-1 [Nicotiana sylvestris] >XP_016450979.1 PREDICTED: 60S ribosomal protein L9-1 [Nicotiana tabacum] >XP_016481780.1 PREDICTED: 60S ribosomal protein L9-1 [Nicotiana tabacum] >XP_019235076.1 PREDICTED: 60S ribosomal protein L9-1 [Nicotiana attenuata] >OIT26322.1 60s ribosomal protein l9-1 [Nicotiana attenuata]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 118/197 (59.90%), Postives = 152/197 (77.16%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+GV++ +K++ + V+GPRG+L R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH ENLITGVTKG+ YKMRFVYAHFPIN S+T +K++E+RNFLGEKRVR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG I E + Sbjct: 1 MKTILSSETMDIPDGVSIKVKAKQIEVEGPRGKLVRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITGGNKSIEIRNFLGEKRVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIAEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_009775635.1 (PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana sylvestris] >XP_016501245.1 PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tabacum] >XP_019258244.1 PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana attenuata] >OIT40655.1 60s ribosomal protein l9-1 [Nicotiana attenuata]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 118/197 (59.90%), Postives = 151/197 (76.65%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+GV + +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH ENLITGVTKG+ YKMRFVYAHFPIN S+T +K +E+RNFLGEKRVR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG I E + Sbjct: 1 MKTILSSETMDIPDGVKIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITGGNKAIEIRNFLGEKRVRKVDMLEGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIAEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_016547132.1 (PREDICTED: 60S ribosomal protein L9-1 [Capsicum annuum] >PHT95573.1 60S ribosomal protein L9 [Capsicum annuum]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 116/197 (58.88%), Postives = 154/197 (78.17%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+G+T+ +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH +NLITGV+KG+ YKMRFVYAHFPIN S+T +K++E+RNFLGEK+VR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG IVE + Sbjct: 1 MKTILSSETMDIPDGITIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVDNLITGVSKGYRYKMRFVYAHFPINASITGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: GAX12046.1 (large subunit ribosomal protein L9e [Fistulifera solaris]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 116/199 (58.29%), Postives = 149/199 (74.87%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGN------KDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVE 194 MK +LA + V +PE V ++I +R + VKGP GEL+R FKH+ + + G KD + +KVDLWF +RKQLA+ RTVCSH EN+ GVT+GF+YK+R VY+HFPINV+L+ TVE+RNFLGEKRVR+VEL PGV+YVR+ VKDQIEL G D+T VSLTAA+IQQ T ++ KD+RKFLDGIYV+ KG + E Sbjct: 1 MKTVLAARAVIVPENVEVSINARSIKVKGPLGELTRDFKHIAMDMRICKGADIMDFLKDPQEDRNYVKVDLWFAHRKQLASCRTVCSHIENMFVGVTRGFIYKLRAVYSHFPINVTLSGNTVEIRNFLGEKRVRKVELFPGVKYVRSETVKDQIELSGIDITAVSLTAAQIQQATNIRNKDLRKFLDGIYVAEKGAVPE 199
BLAST of NO06G01640 vs. NCBI_GenBank
Match: GAX18928.1 (large subunit ribosomal protein L9e [Fistulifera solaris]) HSP 1 Score: 238.4 bits (607), Expect = 1.800e-59 Identity = 116/199 (58.29%), Postives = 149/199 (74.87%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGN------KDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVE 194 MK +LA + V +PE V ++I +R + VKGP GEL+R FKH+ + + G KD + +KVDLWF +RKQLA+ RTVCSH EN+ GVT+GF+YK+R VY+HFPINV+L+ TVE+RNFLGEKRVR+VEL PGV+YVR+ VKDQIEL G D+T VSLTAA+IQQ T ++ KD+RKFLDGIYV+ KG + E Sbjct: 1 MKTVLAARAVIVPENVEVSINARSIKVKGPLGELTRDFKHIAMDMRICKGAEIMDFLKDPQEDRNYVKVDLWFAHRKQLASCRTVCSHIENMFVGVTRGFVYKLRAVYSHFPINVTLSGNTVEIRNFLGEKRVRKVELFPGVKYVRSETVKDQIELSGIDITAVSLTAAQIQQATNIRNKDLRKFLDGIYVAEKGAVPE 199
BLAST of NO06G01640 vs. NCBI_GenBank
Match: GAX97593.1 (60S ribosomal protein L9 [Pythium insidiosum]) HSP 1 Score: 237.7 bits (605), Expect = 3.200e-59 Identity = 119/195 (61.03%), Postives = 147/195 (75.38%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 M+ +LAT++V IPE VT+T+ R VTV+G RG+++R F+H+ L +V N +L+VDLWFGNRKQLA +RTVC+ EN+ITGV G+ YKMRFVYAHFPINV+ ++ VE+RNFLGEKRVRRV L GVEYVR++DVKDQIEL G D+T VS AA I VKRKDIRKFLDGIYVS KG+I E + Sbjct: 1 MRQLLATRFVEIPEAVTLTLDGRKVTVEGKRGKITRDFRHVTLDMRMV--------NKTQLRVDLWFGNRKQLACVRTVCTLIENMITGVQFGYKYKMRFVYAHFPINVTCENRVVEIRNFLGEKRVRRVPLSEGVEYVRSADVKDQIELSGIDITKVSQDAANITGACLVKRKDIRKFLDGIYVSEKGNIEEPE 187
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_004241407.1 (PREDICTED: 60S ribosomal protein L9-1 [Solanum lycopersicum] >XP_015079611.1 PREDICTED: 60S ribosomal protein L9-1-like [Solanum pennellii]) HSP 1 Score: 236.9 bits (603), Expect = 5.400e-59 Identity = 117/197 (59.39%), Postives = 152/197 (77.16%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+G+T+ +K++ + V+GPRG+L R FKHLNL F+L+ KD+ T KKLKVD WFG+RK A+IRT SH NLI GVTKG+ YKMRFVYAHFPIN S+T +K++E+RNFLGEK+VR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG IVE + Sbjct: 1 MKTILSSETMDIPDGITIKVKAKQIEVEGPRGKLVRNFKHLNLDFQLI---KDEETGQKKLKVDAWFGSRKATASIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASITGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGKIVEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_015061673.1 (PREDICTED: 60S ribosomal protein L9-1-like [Solanum pennellii]) HSP 1 Score: 236.1 bits (601), Expect = 9.200e-59 Identity = 115/197 (58.38%), Postives = 152/197 (77.16%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+G+T+ +K++ + ++GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WF +RK A IRT SH ENLITGVTKG+ YKMRFVYAHFPIN S+T +K++E+RNFLGEK+VR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG I E + Sbjct: 1 MKTILSSETMDIPDGITIKVKAKLIEIEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFSSRKATAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIAEEE 194 The following BLAST results are available for this feature:
BLAST of NO06G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01640 ID=NO06G01640|Name=NO06G01640|organism=Nannochloropsis oceanica|type=gene|length=1312bpback to top protein sequence of NO06G01640.1 >NO06G01640.1-protein ID=NO06G01640.1-protein|Name=NO06G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=196bpback to top Synonyms
Publications
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