NO06G01270, NO06G01270 (gene) Nannochloropsis oceanica

Overview
NameNO06G01270
Unique NameNO06G01270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6307
Alignment locationchr6:406549..412855 -

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Properties
Property NameValue
DescriptionVacuolar protein sorting-associated protein 13B
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:406549..412855 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13A_N
Homology
BLAST of NO06G01270 vs. NCBI_GenBank
Match: EWM26167.1 (hypothetical protein Naga_100121g4 [Nannochloropsis gaditana])

HSP 1 Score: 626.3 bits (1614), Expect = 3.100e-175
Identity = 461/1280 (36.02%), Postives = 646/1280 (50.47%), Query Frame = 0
Query:  655 MRLVLRWGHQSEEGDREGCRETEMMTSAPVLLESLFERSLAVRASSRREETREEVMAGAEEGLNPGMASVLVFRMFETSTSR------SSTPGIISDADSATGGLRRRSWDVLLTEDFYCRLTPALVMGLAAFNFLPSSIPVSTTSVSSFSXXXXSLSNPPLHARIQLRAKLIKVSFACVNPMENSTXXXXXXXXIVRTQRQRPDRSDWLIQVDNLLIEQHQQQRLGLREGSSSSSSLKLARFSLGSNFFHKEALAPATSAEAALPVAAATLTRRGGGGHFAPLLGAENVTLSIVARVQPXXXXXXXXXXXXXXXXXXXV--HVSFPGGMVLSVLPAHMEMCVAIISFFRTKDGDALETSASRLAIRHPLPSFVQMACSSASIEYSRTXXXXXXXXXXXXXXXXXREGVELAGDTTETMAVLMESFSVRNLTINSXXXXXXXXXXXXXXXXXXXXXXXXCSTLIIQTPQVSFQTFTAYKDGRKINISAPQHLSLHLSPLKIYALKNAAIEIMRVIAALPSSPAAAGASTQEEMFVRAEMMTVMVDLPWLDGELPRVVFKCRKGEWIALCQNDNRASSLPLPSTKELTQNRLTVAHMTAVGEVPRRPVPVTRTIITSSLLARLWMERHDTQRYACLASFLSPRESDHLSAALCCNRAHFVTARAKEEDVVLVPLLIPEEEDVGEVDGGTEGGGFFEMKWQTRRKTRTMVHMEVGFAPCQFMLYFPFLYALIRLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLLLKARKSQVLVLGGNIQDARFALLFDLDKFVFWRRSERTGGEGGAGLMVT----PTEIRRMGFRTHMGLWRFDSGQGLELRQAWTLIERADFEVQKEGG---REGGREDEARVVHISPVALTVGRLELAVLWRVVGVFGRSVTQAPPVEGSDKRTNYTAAAISAAGESSVRSTPAVACAEEE-EKESPNMRLVCPYLYLSFKTPRFSPASSSFTPGSWTGAHSSLSMAHAVDTDTLAFHLNLETCHIQIGTSSGRVDVSEVIVKDCRSTHPSLSSPRRLPSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLALHPRPEFISSFSGTSALGLTWHKSLGGSTADISLQLQPSTLHLDPHSLALLSALGGFVNLNLELVAAKDAEEAQATISAAGGCGGGGETAVSGKRNVPLSLFLLRRTETVKLLTDHLKVVLVGVPPHPIHSAAAATAAVVPASLEIEVEQLFSSLRTAGYSAEQYLNLVQVRAHIISYE 1919
            M ++L+WG   E    EG        SAP+LLE+LF+R+L V+AS+R ++  E+V+ GAE GL P  ++VLV R F+   S          P    D ++     +R   DVL +E   CRLTPA+V+GLA F     S P+  +SVS         +  P      +R   ++V+FAC  P  N                QRP   + L+Q+++L ++  QQ        +S   S ++AR ++G     K     +TSA             R G      L  A+N++ S+ + ++                        +S P G+ LSV+PA+    +AI +F    DG+AL+ + + L + HP  SFV M C    +   +T                  E      D+ + + ++M+ FSV     ++                         S LI+QTP V  +T T+ ++GR   +S PQ  + ++SPL I+AL+ AA+EI R++AALPSSP   GAST+E+M +  +  T+M+D+PWL GELPR VF CR GEW+    N+ RA +        L  N L +AH+   G VP  P    R   +S      +  RH       L  FL P E + L AAL   +A    ++ + E++V+VPLL+P+E+ +  V        F E+ WQ+ RKTR MVHMEV F PCQ +LY PFLYAL+RLGT                                             PTLLL A+ S+VL+LGG +QDARF +  DLD  V WRR E   G  G    VT    P EIRR+GF   MG WR D+ QGLEL  AW LIER DFEV+   G   +E    + AR V +SP+ALT+G LE+AVLWRVVGVFGR+VT+AP V+ S    N+  A      +    ++  +  A+++  KE PN+RL CPYLY+SFK+PR S  S  F          + +++ AVD + +AFHL LE C + +GT  G  DV+ +++++ R+TH   S                                          GLAL PRP+F+S FSGTSAL   WHK   G+ +++ +QLQPS L+LDPHS + L +LGGF+NL+LE++AAKDA EA+A   A          A    R   LS FLL RTET KL+TDHLKVVL         S+ +  A ++P +LEIE +Q+ +SLRTAGY+ + YLN+VQ R  I+  E
Sbjct:    1 MPVLLQWGETRESEKEEG-----PTASAPILLEALFKRTLLVKASNRSDDYVEKVLQGAEGGLRPLRSTVLVVRYFQERHSELRGRDMGDRPWGGGDRETGEADSQRIVVDVLFSEALRCRLTPAVVLGLACF----VSPPLRASSVSPAPN-----AYRPWQTTCNIRIGSLQVAFACNGPGGN----------------QRP---ECLLQLEDLDLKHCQQ------GPTSHHRSCRMARLAIGM----KNVTMDSTSAS------------RLGTEDVLTLFEAKNMSFSLESSIKQIHQRGIWNGRKSSLDEEMHQCGKISMPLGVSLSVIPAYWRFGLAISTFLCRNDGNALDATIAGLPLVHPPNSFVCMTCECLEVAMKKTAIAPISGSV---------EDDTPTRDSRDMLEMVMKEFSVSQKNSHACRAVIDKEKTSGPCIKTFPETTKG-SFLILQTPVVWVKTITSVQEGRDTEMSVPQQFTFYVSPLNIWALRTAALEITRLMAALPSSPRIVGASTREKMRLCVDTFTIMIDMPWLAGELPRAVFACRGGEWVV--SNEGRAEA--------LIHNHLGIAHVRVEGHVP--PHNAARGSESS------FSNRHLEFISNKLLPFLLPVEEESLKAAL--QQARHQGSKFEGEEMVVVPLLVPDEDCMVRV----AKKAFVEISWQSERKTRAMVHMEVAFEPCQCILYCPFLYALLRLGT--------LASKPMTKSSSLHAGKIEDREERMAKADDEEDVAPPCPTLLLTAQTSRVLLLGGTLQDARFGVSIDLDNLVLWRRGESGNGRPGEETEVTAPAMPMEIRRLGFGAQMGQWRVDANQGLELVHAWNLIERVDFEVEGGKGAFIKEDVSRETARTVLVSPLALTLGTLEMAVLWRVVGVFGRNVTRAPLVQCSG---NHAIACREYGNDGHASTSARLRNADKDVGKELPNLRLACPYLYVSFKSPRHS--SRDFC----AEMPPTRTISQAVDMEKVAFHLKLEDCTLSLGTHGGHFDVARLVIENRRATHTGDSLTHH-------------------------------------RGLALLPRPDFLSLFSGTSALTFAWHKPANGNASEMIIQLQPSILYLDPHSCSTLRSLGGFMNLDLEMLAAKDATEARAVAVA----------AARRSRGTRLSSFLLGRTETTKLVTDHLKVVL---------SSDSRHAGLLP-TLEIEADQVLASLRTAGYNVDHYLNMVQTRISILMTE 1117          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: CBN76641.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 113.6 bits (283), Expect = 6.800e-21
Identity = 85/282 (30.14%), Postives = 131/282 (46.45%), Query Frame = 0
Query:   54 RQIQDSLN---HLIEGGVVAGITGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVEILVK--RSSSSRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQEGTAVGGGDKPKGWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLDGRGPRSXXXXXXXXXXXXXXXXXEAPLVDRASFKLNM 331
            R +Q  L+   H IE   +  + GDVVLE L LRK++L ++  +  +YD +RG  KELR+ IPW R+  QS+P +++ +KTVEI++     ++S   S R     PH                                  R G     E+     V       GW+  L  K+L N+ + V NL ++YE+ D   V +A + +++  SADP ++W PA+   D P   +L K VH  D+TVCLD                       E P+++RASF++ +
Sbjct:    2 RVLQQQLSKYIHNIELEELGLMGGDVVLENLELRKDVLHDIGGISTDYDFSRGFIKELRIHIPWTRL--QSRP-IEIKVKTVEIIITPITHAASHRPSTRRSRTGPH---------------------------------SRHGGRSTDEQAAPAGV------SGWMQQLLTKVLANMSIEVSNLVLKYEDAD--VVLSAALKSLVCFSADPDREWTPAFASLDDPFG-FLHKLVHASDLTVCLD-------RYCAPDSSRRRQVQAFEVPILNRASFEVQL 231          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: XP_024582214.1 (Vacuolar protein sorting-associated protein [Plasmopara halstedii] >CEG45845.1 Vacuolar protein sorting-associated protein [Plasmopara halstedii])

HSP 1 Score: 96.3 bits (238), Expect = 1.100e-15
Identity = 87/352 (24.72%), Postives = 149/352 (42.33%), Query Frame = 0
Query:   42 MDFTQGIRSYLTRQIQDSLNHLIEGGVVAGI---TGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVEILVKRSSSSRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQEGTAVGGGDKPK-GWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLDGR-GPRSXXXXXXXXXXXXXXXXXEAPLVDRASFKLNMALDVRDIFQFWGTEGPPLPPSASPSPATASASYFRTDFFSPMSMDGLFLDSPYTVSSP 389
            +D    +R Y+ + +Q  L+  IE   + G+    GD+VL +L +++++LR  L +P  +D +RG  +ELR+ IPW ++++QS   ++V L T+E+++   SS+                                            +    G AV  +  E       D+PK GW+H   +K+L NV L+V+NL ++YE +D   V +  +  +   SA     W  ++ E    + P + K +   DVT+ LD                        E P++ RAS  +   + +       G   P +  SAS +    SAS  R D      +DGL + +P  +  P
Sbjct:    2 LDLLSPVRGYIAQNLQFYLSKYIEDIQLEGLGLFGGDLVLNDLEIKRHVLRESLEIPSSFDFSRGFIRELRIHIPWTQLLSQS---IEVKLYTIELILTARSST--------------------------------------------AGATLGDAVTDKATE------IDQPKSGWIHDTLQKILSNVSLQVNNLVLKYEYDD--IVFSIALGTLDFYSASENDGWNRSFEEL-KGSRPVICKRIDAKDVTIFLDRYINDEGTNQCTRQYPLRRMVAGYEVPVLSRASASVRAKVQLPHNAAETGKRDPTISISASFNQHHPSASDSR-DARDIFDVDGLLIYNPSVLCDP 296          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: GAY02516.1 (Hypothetical protein PINS_010336, partial [Pythium insidiosum])

HSP 1 Score: 85.5 bits (210), Expect = 2.000e-12
Identity = 72/282 (25.53%), Postives = 125/282 (44.33%), Query Frame = 0
Query:   48 IRSYLTRQIQDSLNHLIEGGVVAGI---TGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVEILVKRSSSSRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQEGTAVGGGDKPK-GWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLDGRGPRSXXXXXXXXXXXXXXXXXEAPLVDRAS 326
            +R Y+ + +Q  L+  IEG  + GI    GD+VL +L +++++L   L +P  +D  RG  +ELR+ IPW +++  SQP +++ L TVE+++             + D  HQ                           A   K +   +   E  +   +   + PK GWL    +K+L NV L+++NL ++YE++D   V +  +  +   +A+ G+DW   + E        + +     D+TV LD R  R                  E PL++R S
Sbjct:    9 LRGYIAQNLQFYLSKYIEGIHLEGIGLXXGDIVLNDLEIKRHVLVQSLEIPSSFDFTRGFIRELRIHIPWTQLL--SQP-IEIKLYTVEMIL----------TAQEADAKHQ-------------------------RNASTDKRKSSRSKSMESADDDEI---ENPKSGWLRDTLQKILTNVTLQINNLVLKYEQDD--IVLSVALGTLDFYAANDGKDWTRVFTE-PKGKDQSIARVAEAKDLTVFLD-RYERDETWHPATSRVPRRVSGYELPLLNRTS 245          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: XP_002904024.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY54202.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 84.3 bits (207), Expect = 4.400e-12
Identity = 83/357 (23.25%), Postives = 147/357 (41.18%), Query Frame = 0
Query:   42 MDFTQGIRSYLTRQIQDSLNHLIEGGVVAG---ITGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVEILVKRSSSSRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQEGTAVGGGDKPK-GWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLDG-RGPRSXXXXXXXXXXXXXXXXXEAPLVDRASFKLNMALDV-----RDIFQFWGTEGPPLPPSASPSPATASASYFRTDFFSPMSMDGLFLDSPYTVSSP 389
            +D    +R Y+ + +Q  L+  IE   + G     GD+VL +L +++++LR  L +P  +D +RG  +ELR+ IPW +++  SQP ++V L T+E+++   +S+   S  D                                            A +  E E       D+PK GW+H + +K+L NV ++++NL ++YE +D   V +  +  +   SA     W+ ++ E        + K +   DVT  LD  +   +                 E P+++R S  +   L +     +D  +   T  P LP    P  A    +         + +DGLF   P  +  P
Sbjct:    2 LDLLSPLRGYIAQNLQFYLSKYIEDIQLEGFGLFGGDLVLNDLEIKRHVLRESLEIPSSFDFSRGFIRELRIHIPWTQLL--SQP-IEVKLYTIELILTGKNSAARTSSVD--------------------------------------------AAVDREPE------IDQPKSGWIHDMLQKILANVSVQINNLVLKYEHDD--VVFSIALGTLDFYSASESDGWKRSFEELKGGRRA-ICKRIDAKDVTNFLDRYKSDGAAKEDTRQGTVRRKVVGYEVPVLNRTSVSVRAKLQLFPSAAKDDHRSKST-SPALPMHQQPPVANLDRAEGNI-----LDVDGLFAYRPSVMCDP 296          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: GBG27559.1 (Vacuolar protein sorting-associated protein 13B [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 84.0 bits (206), Expect = 5.800e-12
Identity = 67/274 (24.45%), Postives = 122/274 (44.53%), Query Frame = 0
Query:   48 IRSYLTRQIQDSLNHLIEGGVV--AGITGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVEILVKRSSS---SRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQE-----------------------GTAVGGGDKPKGWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLD 294
            ++ YLT+ +  SL+  I    V   G+ GD++L +L LR ++L+  L +PL ++ +RG  KELR+ I W +++  SQP + V + T+EI++   S     R      +  +     S    +  H   K   K   +   T  P      +   P+                                  +  GWLH   +K++ N  + +++L ++YE    + V +    ++ ++SADP Q W+ A+ E     +  +FKA+ + D+T+ LD
Sbjct:   10 LKRYLTQTLSTSLSKYISNINVDTLGVGGDIILRDLELRLDVLQESLKIPLAFEFSRGFIKELRIQIHWTKLM--SQP-IHVKVSTIEIILTARSELQFRRLQLAYQRHTSKSGADSSQDAKAAHAAAKTTAKSGKLANGTPTPGHKSGTNGAGPQSPSRXXXXXXXXXXXXXXXXXXXXXXXXXXTDSSESGGWLHDAIRKIIANATVEINDLVLKYEH--ANVVLSTSFRSLRVSSADPSQGWKVAFQE-PKGVNRSIFKAIDVRDLTINLD 277          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: CCI40654.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 83.6 bits (205), Expect = 7.500e-12
Identity = 65/249 (26.10%), Postives = 123/249 (49.40%), Query Frame = 0
Query:   48 IRSYLTRQIQDSLNHLIEGGVVAGI---TGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVEILVKRSSSSRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQEGTAVGGGDKPKGWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLD 294
            IRSY+ + +Q  L+  IEG  + G+    GD+VL +L +++++L   L +   +D +RG  +ELR+ IPW +++  SQP ++V L T+EI+                        L++++  ++ Q+          +T+  +K  R S+       G A    +    W+H   +K+L+NV ++V+NL ++YEE +   V +  + ++ + SA     W   + E + P    + K +   D+T+ LD
Sbjct:    9 IRSYIAQTLQFYLSKYIEGIHLEGLGFFGGDLVLNDLEIKRHVLLESLEISPSFDFSRGFIRELRIHIPWTQLL--SQP-IEVKLYTIEII------------------------LTTVKSQNDAQR----------STSASTKRSRVSS-------GQATQLDEAKPSWIHEALQKILVNVTVQVNNLVVKYEESE--VVLSMALGSLEIKSARNRLGWMAGFAEVEGPQQE-ICKIITAGDLTIFLD 210          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: ETI54001.1 (hypothetical protein F443_03136 [Phytophthora parasitica P1569])

HSP 1 Score: 83.2 bits (204), Expect = 9.800e-12
Identity = 85/354 (24.01%), Postives = 145/354 (40.96%), Query Frame = 0
Query:   42 MDFTQGIRSYLTRQIQDSLNHLIEGGVVAGI---TGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVE-ILVKRSSSSRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQEGTAVGGGDKPKGWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLDG-RGPRSXXXXXXXXXXXXXXXXXEAPLVDR--ASFKLNMALDVRDIFQFWGTEGPPLPPSASPSPATASASYFRTDFFSPMSMDGLFLDSPYTVSSP 389
            +D    +R Y+ + +Q  L+  IE   + G+    GD+VL +L +++++LR  L +P  +D +RG  +ELR+ IPW +++  SQP ++V L T+E IL  ++ S+R  S    VD           +P  E  K                                         GW++   +++L N+ ++V+NL ++YE +D   V +  +  +   SA+  + W+ ++ E        + K +   DVT+ LD                        E P++ R  AS +  + L         G     L   ASP     S +    D  S + MDGLF   P  +  P
Sbjct:    2 LDLLSPLRGYIAQNLQFYLSKYIEDIQLEGLGLFGGDLVLNDLEIKRHVLRESLEIPSSFDFSRGFIRELRIHIPWTQLL--SQP-IEVKLYTIELILTGKNRSARAASVDTAVDR----------EPEIEQPK----------------------------------------SGWINDTLQRILANISVQVNNLVLKYENDD--VVFSIALGTLDFYSANEKESWKRSFEELKGGRRA-ICKRIDAKDVTIFLDRYTNDGVTKDGGRQDSVRRKVIGYEVPVLSRTSASVRAKLQLFPNAAMNGQGDSRSNLASPASPLHQQRSTASGVRDEGSIIDMDGLFAYKPSVLCDP 299          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: ETK93849.1 (hypothetical protein L915_03024 [Phytophthora parasitica])

HSP 1 Score: 83.2 bits (204), Expect = 9.800e-12
Identity = 85/354 (24.01%), Postives = 145/354 (40.96%), Query Frame = 0
Query:   42 MDFTQGIRSYLTRQIQDSLNHLIEGGVVAGI---TGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVE-ILVKRSSSSRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQEGTAVGGGDKPKGWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLDG-RGPRSXXXXXXXXXXXXXXXXXEAPLVDR--ASFKLNMALDVRDIFQFWGTEGPPLPPSASPSPATASASYFRTDFFSPMSMDGLFLDSPYTVSSP 389
            +D    +R Y+ + +Q  L+  IE   + G+    GD+VL +L +++++LR  L +P  +D +RG  +ELR+ IPW +++  SQP ++V L T+E IL  ++ S+R  S    VD           +P  E  K                                         GW++   +++L N+ ++V+NL ++YE +D   V +  +  +   SA+  + W+ ++ E        + K +   DVT+ LD                        E P++ R  AS +  + L         G     L   ASP     S +    D  S + MDGLF   P  +  P
Sbjct:    2 LDLLSPLRGYIAQNLQFYLSKYIEDIQLEGLGLFGGDLVLNDLEIKRHVLRESLEIPSSFDFSRGFIRELRIHIPWTQLL--SQP-IEVKLYTIELILTGKNRSARAASVDTAVDR----------EPEIEQPK----------------------------------------SGWINDTLQRILANISVQVNNLVLKYENDD--VVFSIALGTLDFYSANEKESWKRSFEELKGGRRA-ICKRIDAKDVTIFLDRYTNDGVTKDGGRQDSVRRKVIGYEVPVLSRTSASVRAKLQLFPNAAMNGQGDSRSNLASPASPLHQQRSTASGVRDEGSIIDMDGLFAYKPSVLCDP 299          
BLAST of NO06G01270 vs. NCBI_GenBank
Match: ETL47243.1 (hypothetical protein L916_02993 [Phytophthora parasitica])

HSP 1 Score: 83.2 bits (204), Expect = 9.800e-12
Identity = 85/354 (24.01%), Postives = 145/354 (40.96%), Query Frame = 0
Query:   42 MDFTQGIRSYLTRQIQDSLNHLIEGGVVAGI---TGDVVLEELSLRKNLLRNLLNLPLEYDIARGTAKELRVSIPWARIIAQSQPVVQVTLKTVE-ILVKRSSSSRHDSPRDKVDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQEGTAVGGGDKPKGWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYICNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLDG-RGPRSXXXXXXXXXXXXXXXXXEAPLVDR--ASFKLNMALDVRDIFQFWGTEGPPLPPSASPSPATASASYFRTDFFSPMSMDGLFLDSPYTVSSP 389
            +D    +R Y+ + +Q  L+  IE   + G+    GD+VL +L +++++LR  L +P  +D +RG  +ELR+ IPW +++  SQP ++V L T+E IL  ++ S+R  S    VD           +P  E  K                                         GW++   +++L N+ ++V+NL ++YE +D   V +  +  +   SA+  + W+ ++ E        + K +   DVT+ LD                        E P++ R  AS +  + L         G     L   ASP     S +    D  S + MDGLF   P  +  P
Sbjct:    2 LDLLSPLRGYIAQNLQFYLSKYIEDIQLEGLGLFGGDLVLNDLEIKRHVLRESLEIPSSFDFSRGFIRELRIHIPWTQLL--SQP-IEVKLYTIELILTGKNRSARAASVDTAVDR----------EPEIEQPK----------------------------------------SGWINDTLQRILANISVQVNNLVLKYENDD--VVFSIALGTLDFYSANEKESWKRSFEELKGGRRA-ICKRIDAKDVTIFLDRYTNDGVTKDGGRQDSVRRKVIGYEVPVLSRTSASVRAKLQLFPNAAMNGQGDSRSNLASPASPLHQQRSTASGVRDEGSIIDMDGLFAYKPSVLCDP 299          
The following BLAST results are available for this feature:
BLAST of NO06G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26167.13.100e-17536.02hypothetical protein Naga_100121g4 [Nannochloropsi... [more]
CBN76641.16.800e-2130.14conserved unknown protein [Ectocarpus siliculosus][more]
XP_024582214.11.100e-1524.72Vacuolar protein sorting-associated protein [Plasm... [more]
GAY02516.12.000e-1225.53Hypothetical protein PINS_010336, partial [Pythium... [more]
XP_002904024.14.400e-1223.25conserved hypothetical protein [Phytophthora infes... [more]
GBG27559.15.800e-1224.45Vacuolar protein sorting-associated protein 13B [A... [more]
CCI40654.17.500e-1226.10unnamed protein product [Albugo candida][more]
ETI54001.19.800e-1224.01hypothetical protein F443_03136 [Phytophthora para... [more]
ETK93849.19.800e-1224.01hypothetical protein L915_03024 [Phytophthora para... [more]
ETL47243.19.800e-1224.01hypothetical protein L916_02993 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR145ngnoR145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01270.1NO06G01270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01270.1NO06G01270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01270 ID=NO06G01270|Name=NO06G01270|organism=Nannochloropsis oceanica|type=gene|length=6307bp
ATGAGAGCCTCGTCTTTAATTGTGTTGGCCACAACGTCCGGCAGTCGGCG
CGGGCGCGCCTCGGATAGCCCTgtaagtggggacaggagcgagtgtggtt
gaatgttcggagtaagtgagggcgtggtgtctatgcctgcaatgagaaga
tgaagtcacaagcaaggtagtgagtgcattgctgtgtcggttgccctcgc
ccatttctcgcccagccacgaagtgatccttgaccgtctcaccacaggcc
ctgcgatcgccctatactcctgcgataatatgcaccaacatcctagacaa
ccaagaaaacgtgttggagtacttgaaaatcaagaggtgcttgctgctct
tggcttgttttccccctcggctaatccgcgctacaatgggccatcttcat
catcacaattctaggcgaattcattcacaccccttctcgagtggtcaacc
ctagttcccagcaccgaactcaattaccatccacatccctgcacacacag
GTGCACACGTACCATACTGTCAAGGCACTGGGTCTAGTCCTCCACGTCGC
CATGGACTTCACGCAGGGCATCCGGAGTTACCTGACGAGGCAGATCCAGG
ACTCTTTGAATCATTTGATTGAGGGCGGGGTTGTGGCTGGGATCACAGGG
GATGTGGTGCTCGAGGAGTTGTCCCTGCGAAAAAATCTGCTGCGCAACCT
GCTCAACCTTCCCTTGGAGTATGATATTGCCCGAGGCACGGCCAAAGAAT
TGCGGGTTTCCATCCCATGGGCCCGCATTATCGCTCAGTCCCAGCCCGTG
GTGCAGGTGACTTTAAAGACGGTGGAGATCCTCGTCAAGCGCTCTTCTTC
TTCGAGACATGACAGTCCTAGAGATAAAGTAGACAATCCCCATCAACCAC
CTTCCTTGTCGTCTTTACAGCCGCACCACGAATTGCAAAAATTACCCGTC
AAGCTTTCTCCCGTCCCACCTGCCACGGCTCCCCCCTCCAAGGGCCGACG
AGGTAGCGCTGTAATGCCCGAAGAGCAGGAAGGCACCGCCGTCGGGGGGG
GAGATAAACCCAAAGGCTGGCTTCATTCCCTGGGGAAGAAGCTTTTGATG
AACGTGATGTTGCGGGTGGACAACTTGGCGATTCGCTACGAGGAGGAGGA
TGGGAGTACGGTCGCGACTGCGTACATATGCAATGTCCTTTTGAATTCTG
CTGATCCAGGGCAGGACTGGCAGCCGGCTTACAACGAATGTGACCCCCCT
GCTAGCCCTTGGCTATTCAAGGCCGTGCACCTCGACGATGTCACAGTCTG
TTTGGATGGACGTGGGCCGAGAAGCAGCAGCAGCAGCAGTTGCAGCGGCG
GCAGCAGTAGCAGCAAGCGGCGGCATGAAGCCCCTCTTGTAGACCGTGCC
TCGTTCAAGCTGAATATGGCCCTAGATGTCCGCGACATTTTCCAATTCTG
GGGCACGGAAGGGCCACCCCTCCCTCCCTCGGCCTCTCCTTCGCCTGCTA
CAGCAAGTGCGTCGTATTTTCGCACTGATTTTTTTTCCCCCATGTCAATG
GATGGCCTTTTCCTCGACAGTCCTTACACCGTTTCTTCTCCTCAGCAGAC
CGAGCAGCGACAACAACTGCAACAGCTGCAGCAAGGGGAGGAAGATGAGC
AAGAATGGAGTTTGTATGACGGGTACTTGCCGCCGACGTTTGGGGCACTA
TGTCCGGTACTGGCTTGTCAGGAGGAATGGGGGGAGGGAGGAAGGGAGGG
CGCCTCTCGTGTACCTCGGCCAACATTGGGGCCGTGGGAGGATGGATCGA
ATGCATGGGTTCCTTATGGAAAGGAGGATGAAGGGGGGGAGATCCGGGGG
GGGGAGGGAGAAAGAGACGCCGACGATTTGATAAGAAGgtgcatgctgca
gtggtgctggacgtggagtgtgctcgcttgcgactgtcattcagTGAGCA
TCAAGCAATACTGCTGCAGGCACTACTGTCTCGAGCAGGGCAGAATGTGA
AGGAGGGGAAGAAAGGAGGAGGAGGGAGTAACGTGTCTCCGGTTGATAAG
CAGCAGCAGCCGCAGCAGGAGAAGCCTCCCGTAAATTGTTGGTATGATCG
TCTGCATGTGACCAGCTTTCGACTTCACACCCTTTCCCTTCGTCTGGTTC
GGCACGGCAGTACCGATAGTAGCAGCAGAATAAGAAGCATTAGTAGCAGC
GGCAGTAGTGCTGTTCCCCAACATGCTTCGTGGGTATTCATGCGACTGCG
GGCTCGAAAGTTGTTTTTGGATCGGCAGGAGCTTTGTGGAGCAGGGATGG
GAGGAGCTACAGCAGCAGCTGTACATACTGTAGATGTTCGTGGCGCGTTG
GGTGCTTTGGAGGTGGCATACGCAGGGGAGGATGTATATGAGGAGGAGGA
GGAGGGATGGGAAGGAGAAAGGGGGATCTTATCATCCTGCATGTCGATGA
GATTGGTGCTGCGGTGGGGCCATCAAAGCGAAGAGGGAGACAGGGAGGGT
TGTAGGGAGACAGAGATGATGACCTCAGCGCCCGTCTTATTGGAAAGTTT
GTTTGAGAGGAGCTTGGCTGTGAGGGCGTCCTCCAGGAGGGAGGAAACGA
GGGAGGAAGTGATGGCGGGCGCGGAGGAAGGGTTGAACCCAGGCATGGCG
TCGGTGCTGGTGTTTAGGATGTTTGAAACTAGCACGAGCAGGAGCAGTAC
TCCTGGTATTATTTCTGATGCTGATTCTGCAACTGGAGGTCTCAGAAGGA
GATCGTGGGACGTGTTACTCACGGAGGATTTCTACTGTCGCCTGACCCCG
GCCCTGGTGATGGGGCTGGCAGCCTTCAACTTCCTCCCTTCCTCCATACC
CGTTTCTACCACCTCAGTCTCTTCATTTTCTACTTCCTCCTCCTCTCTTT
CGAATCCGCCTTTGCATGCCCGAATCCAGCTTCGAGCGAAGCTAATCAAA
GTCTCTTTTGCCTGCGTCAACCCCATGGAAAATAGTACCAGCACCAGCAC
CAGCACCAGCAGAATTGTTAGAACACAACGGCAGCGACCCGATCGATCCG
ATTGGCTCATCCAAGTCGACAATCTACTGATCGAGCAACACCAGCAGCAA
CGACTAGGATTACGGGAAGGGTCTTCCTCCTCTTCCTCCTTGAAGCTGGC
GAGGTTCTCTTTAGGTTCCAATTTCTTCCACAAGGAAGCACTAGCACCAG
CAACATCAGCAGAAGCAGCCTTGCCTGTCGCTGCTGCCACTCTCACTAGA
AGGGGGGGCGGAGGTCACTTTGCTCCTCTTCTAGGTGCTGAGAATGTGAC
CTTGTCAATCGTAGCACGTGTGCAACCATCGGCAAGCAGCAGCAGCAGCG
TCAGCAGCAGCAGCAGTAGCAGCAGCAGTATGGATGTGCATGTCAGCTTT
CCTGGAGGAATGGTGTTATCAGTGCTCCCTGCTCACATGGAAATGTGTGT
GGCTATCATCTCTTTTTTCCGCACGAAAGACGGGGACGCTTTAGAAACGT
CTGCGAGCAGACTTGCCATACGTCACCCCCTTCCTTCCTTCGTTCAAATG
GCGTGCAGCAGTGCCTCCATTGAATACAGCAGGACAGGCAGCAGCAGCAG
CAGCAGTAGCAGCAGCAGCAGCGGCGGCGGCGACGGGAGAGAGGGTGTGG
AATTGGCTGGGGACACCACAGAGACGATGGCCGTGCTCATGGAAAGCTTC
TCCGTCCGGAATCTCACCATTAATAGCGGCGCCACCACCACCACTAGCAG
CAGCAGCAGCAATAACAGCAGCAGCAGCAGTCCCGCAAAACCCAACAACT
GCAGCACGCTCATCATCCAAACCCCCCAAGTCTCCTTCCAGACGTTTACC
GCCTACAAGGACGGCCGCAAAATAAACATCTCTGCCCCCCAACACCTCTC
TCTCCACTTAAGCCCTTTGAAAATCTACGCGCTCAAAAATGCCGCCATAG
AGATAATGAGAGTTATAGCAGCGCTACCCTCTTCTCCCGCAGCAGCAGGA
GCGAGCACGCAGGAAGAGATGTTTGTAAGGGCAGAAATGATGACGGTAAT
GGTGGACTTGCCTTGGTTAGACGGAGAGTTGCCGCGGGTTGTGTTCAAGT
GTCGGAAGGGGGAATGGATTGCTCTATGTCAGAATGATAATCGTGCGTCC
TCCCTCCCTCTTCCTTCAACGAAGGAGCTGACTCAGAACAGATTGACAGT
TGCCCACATGACTGCAGTCGGAGAGGTTCCTCGACGCCCCGTACCAGTAA
CAAGGACAATAATAACATCGTCTTTATTAGCCAGGCTGTGGATGGAGAGG
CATGATACTCAGAGATATGCATGTCTAGCTTCTTTTTTGAGTCCGCGGGA
GAGTGACCATCTAAGTGCTGCTCTGTGCTGCAACAGGGCTCATTTCGTGA
CCGCGAGAGCAAAGGAGGAAGATGTGGTGCTGGTCCCTCTGTTGATTCCC
GAGGAAGAGGACGTGGGAGAGGTGGACGGAGGGACAGAAGGGGGGGGGTT
CTTCGAGATGAAGTGGCAAACGAGGAGGAAGACGAGAACGATGGTGCATA
TGGAGGTGGGGTTTGCTCCTTGTCAATTTATGCTTTATTTCCCTTTCCTG
TACGCGCTAATTCGCCTAGGGACTCTCGCTACTACCTCCTCGGCGTCCAC
ACGCGCAGCGACTGCTTTAGCAAAAAAAGAAAGAAAGGAGAGGCGCCAGA
TGCGGCGACAAGCGGGGGAGGAAGGGAAGGTGGAAGAAGAGGAGGAAGAG
TCGCCCCGCCCTACCTTATTGCTCAAGGCACGGAAATCACAGGTCTTGGT
GTTGGGAGGAAACATACAAGACGCACGTTTCGCCCTTCTTTTTGACTTGG
ACAAGTTTGTGTTTTGGCGACGGAGCGAGAGAACGGGGGGGGAGGGAGGA
GCAGGCTTGATGGTGACACCTACCGAGATTAGACGGATGGGCTTCAGGAC
TCATATGGGTCTGTGGAGGTTTGATTCAGGACAAGGGTTGGAGCTTCGAC
AGGCGTGGACGCTGATTGAGAGGGCAGATTTCGAGGTGCAGAAGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGACGAGGCGAGGGTGGTACACATCTCACC
AGTGGCCTTGACGGTGGGGAGGTTGGAGTTGGCAGTGCTGTGGCGGGTGG
TGGGGGTATTCGGTCGCAGCGTGACGCAGGCTCCTCCTGTAGAAGGCAGC
GACAAGCGCACCAATTACACCGCTGCCGCTATTTCTGCTGCCGGTGAAAG
TTCGGTTCGTAGCACTCCTGCAGTCGCTTGTGCGGAAGAGGAAGAGAAGG
AGTCACCAAACATGCGGCTGGTCTGTCCGTACCTCTACTTGTCATTCAAG
ACCCCTCGCTTTTCCCCTGCATCCTCCTCCTTTACACCTGGATCGTGGAC
AGGCGCTCACTCGTCCCTGTCTATGGCGCATGCTGTCGACACGGATACCC
TGGCATTTCATCTTAATCTGGAAACTTGTCATATACAAATAGGGACCTCC
TCAGGGCGAGTGGACGTGTCGGAAGTGATCGTTAAAGATTGTCGAAGCAC
CCACCCTTCCCTATCTTCTCCTCGTCGTCTCCCATCTCGTTCTCAGCACC
AACAACAGTCTTCTTCGTCTCCTCCACCTTCAGACAACTGTCAGCAGCAG
GTACCGCAACAGAAGCAACAGCAGCAGCAGCAGCAACAGCGGGGCCTCGC
CCTCCACCCCCGTCCTGAATTTATCTCGTCCTTCTCTGGCACGTCCGCCC
TTGGACTCACCTGGCACAAATCCCTCGGAGGAAGCACCGCTGATATCTCC
CTTCAACTCCAACCCTCCACTCTCCACCTGGACCCCCACTCCCTCGCTTT
GCTCTCTGCCCTCGGCGGATTCGTGAACCTGAATCTTGAGCTTGTGGCCG
CGAAAGACGCAGAAGAAGCACAGGCTACTATATCTGCGGCTGGTGGTTGT
GGTGGTGGTGGTGAGACCGCAGTCAGTGGAAAGCGGAATGTCCCCCTGTC
CCTGTTCCTCCTGCGACGGACCGAAACTGTCAAGCTGCTGACCGACCATT
TGAAAGTGGTTTTGGTCGGAGTCCCACCTCATCCTATTCATTCTGCTGCT
GCTGCTACTGCCGCTGTTGTCCCGGCTTCTTTGGAAATAGAAGTGGAACA
GCTCTTCAGTAGCTTGCGAACGGCGGGTTATAGCGCGGAGCAGTACCTCA
ATCTCGTCCAAGTCCGTGCTCACATTATCAGTTACGAGAGAGGGAGAGAC
GGAGAATGGCAGGGGGGAGGAAGTGGCCGTTTTTGGATAAAGCGAATGTG
TTTCTGA
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protein sequence of NO06G01270.1

>NO06G01270.1-protein ID=NO06G01270.1-protein|Name=NO06G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1941bp
MRASSLIVLATTSGSRRGRASDSPVHTYHTVKALGLVLHVAMDFTQGIRS
YLTRQIQDSLNHLIEGGVVAGITGDVVLEELSLRKNLLRNLLNLPLEYDI
ARGTAKELRVSIPWARIIAQSQPVVQVTLKTVEILVKRSSSSRHDSPRDK
VDNPHQPPSLSSLQPHHELQKLPVKLSPVPPATAPPSKGRRGSAVMPEEQ
EGTAVGGGDKPKGWLHSLGKKLLMNVMLRVDNLAIRYEEEDGSTVATAYI
CNVLLNSADPGQDWQPAYNECDPPASPWLFKAVHLDDVTVCLDGRGPRSS
SSSSCSGGSSSSKRRHEAPLVDRASFKLNMALDVRDIFQFWGTEGPPLPP
SASPSPATASASYFRTDFFSPMSMDGLFLDSPYTVSSPQQTEQRQQLQQL
QQGEEDEQEWSLYDGYLPPTFGALCPVLACQEEWGEGGREGASRVPRPTL
GPWEDGSNAWVPYGKEDEGGEIRGGEGERDADDLIRSEHQAILLQALLSR
AGQNVKEGKKGGGGSNVSPVDKQQQPQQEKPPVNCWYDRLHVTSFRLHTL
SLRLVRHGSTDSSSRIRSISSSGSSAVPQHASWVFMRLRARKLFLDRQEL
CGAGMGGATAAAVHTVDVRGALGALEVAYAGEDVYEEEEEGWEGERGILS
SCMSMRLVLRWGHQSEEGDREGCRETEMMTSAPVLLESLFERSLAVRASS
RREETREEVMAGAEEGLNPGMASVLVFRMFETSTSRSSTPGIISDADSAT
GGLRRRSWDVLLTEDFYCRLTPALVMGLAAFNFLPSSIPVSTTSVSSFST
SSSSLSNPPLHARIQLRAKLIKVSFACVNPMENSTSTSTSTSRIVRTQRQ
RPDRSDWLIQVDNLLIEQHQQQRLGLREGSSSSSSLKLARFSLGSNFFHK
EALAPATSAEAALPVAAATLTRRGGGGHFAPLLGAENVTLSIVARVQPSA
SSSSSVSSSSSSSSSMDVHVSFPGGMVLSVLPAHMEMCVAIISFFRTKDG
DALETSASRLAIRHPLPSFVQMACSSASIEYSRTGSSSSSSSSSSSGGGD
GREGVELAGDTTETMAVLMESFSVRNLTINSGATTTTSSSSSNNSSSSSP
AKPNNCSTLIIQTPQVSFQTFTAYKDGRKINISAPQHLSLHLSPLKIYAL
KNAAIEIMRVIAALPSSPAAAGASTQEEMFVRAEMMTVMVDLPWLDGELP
RVVFKCRKGEWIALCQNDNRASSLPLPSTKELTQNRLTVAHMTAVGEVPR
RPVPVTRTIITSSLLARLWMERHDTQRYACLASFLSPRESDHLSAALCCN
RAHFVTARAKEEDVVLVPLLIPEEEDVGEVDGGTEGGGFFEMKWQTRRKT
RTMVHMEVGFAPCQFMLYFPFLYALIRLGTLATTSSASTRAATALAKKER
KERRQMRRQAGEEGKVEEEEEESPRPTLLLKARKSQVLVLGGNIQDARFA
LLFDLDKFVFWRRSERTGGEGGAGLMVTPTEIRRMGFRTHMGLWRFDSGQ
GLELRQAWTLIERADFEVQKEGGREGGREDEARVVHISPVALTVGRLELA
VLWRVVGVFGRSVTQAPPVEGSDKRTNYTAAAISAAGESSVRSTPAVACA
EEEEKESPNMRLVCPYLYLSFKTPRFSPASSSFTPGSWTGAHSSLSMAHA
VDTDTLAFHLNLETCHIQIGTSSGRVDVSEVIVKDCRSTHPSLSSPRRLP
SRSQHQQQSSSSPPPSDNCQQQVPQQKQQQQQQQQRGLALHPRPEFISSF
SGTSALGLTWHKSLGGSTADISLQLQPSTLHLDPHSLALLSALGGFVNLN
LELVAAKDAEEAQATISAAGGCGGGGETAVSGKRNVPLSLFLLRRTETVK
LLTDHLKVVLVGVPPHPIHSAAAATAAVVPASLEIEVEQLFSSLRTAGYS
AEQYLNLVQVRAHIISYERGRDGEWQGGGSGRFWIKRMCF*
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Synonyms
Publications