NO06G01210, NO06G01210 (gene) Nannochloropsis oceanica

Overview
NameNO06G01210
Unique NameNO06G01210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3562
Alignment locationchr6:388108..391669 +

Link to JBrowse

Properties
Property NameValue
DescriptionDnaJ homologue
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:388108..391669 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR036236Znf_C2H2_sf
IPR022755Znf_C2H2_jaz
IPR003604Znf_U1
IPR013087Znf_C2H2/integrase_DNA-bd
IPR001623DnaJ_domain
Homology
BLAST of NO06G01210 vs. NCBI_GenBank
Match: CEL96951.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 185.7 bits (470), Expect = 4.200e-43
Identity = 111/258 (43.02%), Postives = 147/258 (56.98%), Query Frame = 0
Query:   20 KECYYAVLGVERSATDAEIKLAYRKLALKHHPDKN-VGDEGATAIFQRLQEANSVLSDKRERAWYDSHRDQILRGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGE--APGFGGPETGWGGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVMQRQ 275
            K C+Y VLGVE  AT  EIK A+RKLALK HPDKN    E AT  FQ LQEA   LSD +ERAWYDSH++QIL G D  D                         K A  V++W +F+++A+ G+G+   GFY+VYRE+F  +   E +              +  E E  AP FG  ++ W  VAAFY +W +F S+  FG+AD+Y  ++AP R+ RRAME+EN++            +RALV +VKKRDKRV+ R+
Sbjct:    2 KTCFYEVLGVEPRATADEIKSAFRKLALKWHPDKNRDNQEEATQKFQELQEAYETLSDAQERAWYDSHKEQILSGGDVSDGGV----------------------KAATRVDIWHYFTTTAYKGFGDDGSGFYSVYREVFANLAAEEEDH------------LSDDEDELGAPSFGDSQSSWKDVAAFYTWWSNFVSKKPFGFADQYNLKEAPDRRYRRAMEQENQRLRKRAKKEFNDTVRALVAWVKKRDKRVIARR 225          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: PRP78786.1 (hypothetical protein PROFUN_00959 [Planoprotostelium fungivorum])

HSP 1 Score: 183.0 bits (463), Expect = 2.700e-42
Identity = 111/255 (43.53%), Postives = 143/255 (56.08%), Query Frame = 0
Query:   20 KECYYAVLGVERSATDAEIKLAYRKLALKHHPDKNVGD-EGATAIFQRLQEANSVLSDKRERAWYDSHRDQILRGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVMQR 274
            K C+Y VL +ER+A DA+IK AYRKLAL+ HPDKN+   + A   F+ +Q A ++LSD +E+AWYD HRD ILRG D                         K  +G   VN+WP+FSSS + G+ + EG    VY EL+  ID  ER++            A   E EAP FG  +T +  V+ FY YW DF SR SF W D+Y   DAP+R ++RAMEKENK+            IR L EFVKKRD RV ++
Sbjct:   10 KRCFYEVLEIERTAGDADIKKAYRKLALQWHPDKNMHQKDEADERFKEIQHAYTILSDPQEKAWYDGHRDSILRGSD---------------------GTADKEQEG---VNLWPYFSSSCYDGFDDEEG----VYSELYKNIDEEERKE------------AGEDEEEAPEFGNSQTEYIKVSKFYNYWTDFISRRSFAWCDQYNPNDAPNRMIKRAMEKENKREREKGRRARNEKIRHLSEFVKKRDPRVKEQ 224          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: XP_004332918.1 (DnaJ domain containing protein [Acanthamoeba castellanii str. Neff] >ELR10905.1 DnaJ domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 180.3 bits (456), Expect = 1.800e-41
Identity = 107/256 (41.80%), Postives = 142/256 (55.47%), Query Frame = 0
Query:   16 SRTGKECYYAVLGVERSATDAEIKLAYRKLALKHHPDKNVG-DEGATAIFQRLQEANSVLSDKRERAWYDSHRDQILRGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAY---VVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRD 268
            +R    C+Y VLGVER+AT  E+K AYRKLALK HPDK +   E A   FQ +Q A +VL+D +ER+WYDSHR+ ILRG D                           G+GA     VN+WP+F++S F G+G+ E GFY VY  LF  +D    E+   +PP A GG  +    +AP FG  ++ W  V  FY YW  F +R +F W D Y    A  R+++RAMEKENKK            ++ LV+++KKRD
Sbjct:    3 ARQAMRCHYEVLGVERTATADELKTAYRKLALKWHPDKIMDQQEEAHRKFQEIQGAYAVLNDPQERSWYDSHRESILRGGD-----------------------GTMEGEGAMHHEGVNIWPYFNASCFRGFGDDEDGFYGVYGRLFTTLD---EEEDTYAPPKAEGGSKS---EKAPAFGTSKSEWADVHRFYSYWEAFFTRKTFAWCDRYNTTQADGRRMKRAMEKENKKERDKAKRAFNDNVKHLVDYIKKRD 229          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: CBJ30861.1 (DnaJ homologue [Ectocarpus siliculosus])

HSP 1 Score: 172.2 bits (435), Expect = 4.800e-39
Identity = 105/252 (41.67%), Postives = 133/252 (52.78%), Query Frame = 0
Query:   22 CYYAVLGVERSATDAEIKLAYRKLALKHHPDKNVGDEGATAI-FQRLQEANSVLSDKRERAWYDSHRDQILRGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVMQ 273
            C Y  LGV R A+  +IK AYRK AL  HPDKNVG+E    + FQ LQ A +VLS+  ER WYD HRD+IL    Y+                         G G   VNV PFFS++ FSG+G+ E GFY  Y   F ++   ER+ G      A   G+  G+G  P  GG +        FYG W  F S LSFGW DEY   +A +R+VRR MEKEN K            +RALV+F ++RD+RV++
Sbjct:   15 CLYLALGVPRDASPPDIKKAYRKQALVWHPDKNVGNEAEAQVRFQELQHAYAVLSNAHERKWYDDHRDEILNPARYEGDGDSDD------------------GAGGRTVNVTPFFSAATFSGFGDDESGFYQTYTRAFREVWDAERDWG-----EASSDGSGWGQGSPPEMGGSKDSCETAEEFYGTWSGFVSGLSFGWVDEYNVNEAENRRVRRLMEKENSKKRAIARRKYQDDVRALVDFCRRRDRRVIR 243          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: EFJ08616.1 (hypothetical protein SELMODRAFT_131503, partial [Selaginella moellendorffii] >EFJ19784.1 hypothetical protein SELMODRAFT_110523, partial [Selaginella moellendorffii])

HSP 1 Score: 171.8 bits (434), Expect = 6.300e-39
Identity = 109/265 (41.13%), Postives = 141/265 (53.21%), Query Frame = 0
Query:   20 KECYYAVLGVERSATDAEIKLAYRKLALKHHPDK----NVGDEGATAIFQRLQEANSVLSDKRERAWYDSHRDQIL-RGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVMQRQVEVGR 280
            K+C Y VLGVERSA+  EI+ AYR+ AL+ HPDK     +    AT  FQ +  A  VL D  ER WYDSHR +IL  GD+  +                            +  N+W +FS SAFSGYG+   GFYAVY E+F KI V E+        +      +G   EAP FGGP +    V+AFY +W  F +   + W DEY   +AP+R+VRR ME+EN+K           A+R L  FVKKRDKRVM+ ++E  R
Sbjct:    4 KQCLYEVLGVERSASAEEIRSAYRREALRWHPDKIQQSGISAGEATERFQAISSAWEVLGDPLERKWYDSHRSEILSSGDELSE----------------------------FEFNLWSYFSPSAFSGYGDSRNGFYAVYSEVFGKISVQEQ--------VFDRKFGSGSVREAPPFGGPTSSHSEVSAFYSFWSGFKTVKDYAWCDEYDVSEAPNRKVRRLMEEENRKIRKREQREFNDAVRQLAAFVKKRDKRVMEWKLEALR 232          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: XP_002979376.2 (DNAJ protein JJJ1 homolog [Selaginella moellendorffii])

HSP 1 Score: 171.8 bits (434), Expect = 6.300e-39
Identity = 109/265 (41.13%), Postives = 141/265 (53.21%), Query Frame = 0
Query:   20 KECYYAVLGVERSATDAEIKLAYRKLALKHHPDK----NVGDEGATAIFQRLQEANSVLSDKRERAWYDSHRDQIL-RGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVMQRQVEVGR 280
            K+C Y VLGVERSA+  EI+ AYR+ AL+ HPDK     +    AT  FQ +  A  VL D  ER WYDSHR +IL  GD+  +                            +  N+W +FS SAFSGYG+   GFYAVY E+F KI V E+        +      +G   EAP FGGP +    V+AFY +W  F +   + W DEY   +AP+R+VRR ME+EN+K           A+R L  FVKKRDKRVM+ ++E  R
Sbjct:    4 KQCLYEVLGVERSASAEEIRSAYRREALRWHPDKIQQSGISAGEATERFQAISSAWEVLGDPLERKWYDSHRSEILSSGDELSE----------------------------FEFNLWSYFSPSAFSGYGDSRNGFYAVYSEVFGKISVQEQ--------VFDRKFGSGSVREAPPFGGPTSSHSEVSAFYSFWSGFKTVKDYAWCDEYDVSEAPNRKVRRLMEEENRKIRKREQREFNDAVRQLAAFVKKRDKRVMEWKLEALR 232          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: XP_002990347.2 (DNAJ protein JJJ1 homolog [Selaginella moellendorffii])

HSP 1 Score: 171.8 bits (434), Expect = 6.300e-39
Identity = 109/265 (41.13%), Postives = 141/265 (53.21%), Query Frame = 0
Query:   20 KECYYAVLGVERSATDAEIKLAYRKLALKHHPDK----NVGDEGATAIFQRLQEANSVLSDKRERAWYDSHRDQIL-RGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVMQRQVEVGR 280
            K+C Y VLGVERSA+  EI+ AYR+ AL+ HPDK     +    AT  FQ +  A  VL D  ER WYDSHR +IL  GD+  +                            +  N+W +FS SAFSGYG+   GFYAVY E+F KI V E+        +      +G   EAP FGGP +    V+AFY +W  F +   + W DEY   +AP+R+VRR ME+EN+K           A+R L  FVKKRDKRVM+ ++E  R
Sbjct:    4 KQCLYEVLGVERSASAEEIRSAYRREALRWHPDKIQQSGISAGEATERFQAISSAWEVLGDPLERKWYDSHRSEILSSGDELSE----------------------------FEFNLWSYFSPSAFSGYGDSRNGFYAVYSEVFGKISVQEQ--------VFDRKFGSGSVREAPPFGGPTSSHSEVSAFYSFWSGFKTVKDYAWCDEYDVSEAPNRKVRRLMEEENRKIRKREQREFNDAVRQLAAFVKKRDKRVMEWKLEALR 232          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: XP_011087346.1 (DNAJ protein JJJ1 homolog [Sesamum indicum])

HSP 1 Score: 171.4 bits (433), Expect = 8.200e-39
Identity = 107/265 (40.38%), Postives = 140/265 (52.83%), Query Frame = 0
Query:   15 MSRTGKECYYAVLGVERSATDAEIKLAYRKLALKHHPDK----NVGDEGATAIFQRLQEANSVLSDKRERAWYDSHRDQILRGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHE----REKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVM 272
            M+ + K C Y VLG+ R  T  EI+ AY++LAL+ HPDK     V +  ATA FQ L  A  VLSD+RERAWYDSHR+QIL                               G  ++V +++PFFS+S +SGY +   GFY VY +LF KI  +E    ++ G+P P             EAP  G  E+ +  V AFY YW  F + + F WAD+Y     P+R+ RR ME+ENKK            +R L EFVKKRDKRV+
Sbjct:    1 MASSEKRCLYEVLGLNRDCTADEIRSAYKRLALQRHPDKLVQSGVPEAEATAAFQELVNAYEVLSDQRERAWYDSHRNQILFSSS------------------------TATGSSSFVPDLFPFFSNSVYSGYSDSGRGFYKVYGDLFEKIYANEVNFTKKLGLPLP------------REAPVMGNLESPYAQVTAFYNYWLGFITVMDFFWADQYDAMAGPNRKSRRVMEEENKKLRKKARREYNETVRGLAEFVKKRDKRVI 229          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: AGB51053.1 (HSP40-like protein, partial [Botryllus schlosseri] >AGB51056.1 HSP40-like protein, partial [Botryllus schlosseri] >AGB51062.1 HSP40-like protein, partial [Botryllus schlosseri])

HSP 1 Score: 171.0 bits (432), Expect = 1.100e-38
Identity = 141/394 (35.79%), Postives = 188/394 (47.72%), Query Frame = 0
Query:   21 ECYYAVLGVERSATDAEIKLAYRKLALKHHPDKNVGD-EGATAIFQRLQEANSVLSDKRERAWYDSHRDQILRGDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGGVA-AFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVMQRQVEVGREEAARVATEAKGAKLKAEEFKKEKERWLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVFECVVCDKKFKSEKQLNNHKQSRTHK----RMVEELQAE 409
            EC+YA+LGVE +A D  IK AYRK ALK+HPDKN    E AT  F+ +Q A  VLSD +ERAWYD HR++IL    Y++                               N+W +FS SA+ G+G+ + GFYAVYR++F KIDV ++       P    G A  G+   P FG  E+G+  V   FY  W  +C+ LS+ W  +Y  ++AP+R+V R +EKENKK            +R LV FV+KRD RV   + E+      R+ATE     +KAEE         R  XXXXXXXXXX                                                  +    CV C+K FKS   + NH++S+ HK    R+ EE+Q E
Sbjct:    2 ECHYAILGVELNADDGAIKKAYRKAALKYHPDKNPNCLEEATEKFRLVQAAYDVLSDPQERAWYDRHREEILHRKKYENYKEN-------------------------AFNLWEYFSPSAYKGFGDDDNGFYAVYRDVFKKIDVEDQ-------PFKDEGSA--GDEWMPCFGNSESGYDDVVHEFYSSWQSYCTHLSYVWESQYDVKEAPNRRVARLVEKENKKVRDKHKKKRNELVRELVSFVRKRDPRVKAHKAEL-----ERIATE---QAVKAEE---------RRMXXXXXXXXXXALYDQENFEELAKHNERVSQLENMMRDEFGFSSDEDFDNSDQNSEEEQEYSDDMFCVACNKMFKSVMGMRNHQKSKKHKENMNRLKEEMQEE 344          
BLAST of NO06G01210 vs. NCBI_GenBank
Match: XP_019620561.1 (PREDICTED: dnaJ homolog subfamily C member 21-like [Branchiostoma belcheri])

HSP 1 Score: 171.0 bits (432), Expect = 1.100e-38
Identity = 117/297 (39.39%), Postives = 166/297 (55.89%), Query Frame = 0
Query:   22 CYYAVLGVERSATDAEIKLAYRKLALKHHPDKNVGD-EGATAIFQRLQEANSVLSDKRERAWYDSHRDQILR---GDDYDDXXXXXXXXXXXXXXXXXXXXXXKRGKGAYVVNVWPFFSSSAFSGYGEGEGGFYAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGW-GGVAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKXXXXXXXXXXXAIRALVEFVKKRDKRVM--QRQVEVGREEAARVATEAKGAKLKAEEFKK----EKERWL 308
            C+Y VLGV+R+ATD ++K +YRKLAL+ HPDKN  + E AT  F+ +Q+A  VL+D +ERAWYD HR+ ILR   G+DY D                               ++  +FSS+ FSGYG+   GFYAVY ++F KI   +          AR       E +AP FG P++ +   V  FY YW  +C++ SF W ++Y  ++AP+R+V R MEKENKK            +R LV FVKKRDKRV   +++VE    E AR+A E +  +LK E+ K+    +++ W+
Sbjct:    4 CHYEVLGVQRNATDDDLKKSYRKLALRWHPDKNPDNVEEATETFREIQQAYDVLTDPQERAWYDKHREAILRGGLGEDYKDDSE----------------------------DLMQYFSSAVFSGYGDDHKGFYAVYGDVFKKIAEED----------ARFVEPDEDEEKAPDFGAPDSVYEDTVRPFYAYWQSYCTKKSFVWLEKYDTREAPNRRVARLMEKENKKFRDKGKKEYNETVRQLVAFVKKRDKRVQAHKKRVEEKLAEQARLAAE-RHERLKREQAKEVEGYKEQEWM 261          
The following BLAST results are available for this feature:
BLAST of NO06G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEL96951.14.200e-4343.02unnamed protein product [Vitrella brassicaformis C... [more]
PRP78786.12.700e-4243.53hypothetical protein PROFUN_00959 [Planoprotosteli... [more]
XP_004332918.11.800e-4141.80DnaJ domain containing protein [Acanthamoeba caste... [more]
CBJ30861.14.800e-3941.67DnaJ homologue [Ectocarpus siliculosus][more]
EFJ08616.16.300e-3941.13hypothetical protein SELMODRAFT_131503, partial [S... [more]
XP_002979376.26.300e-3941.13DNAJ protein JJJ1 homolog [Selaginella moellendorf... [more]
XP_002990347.26.300e-3941.13DNAJ protein JJJ1 homolog [Selaginella moellendorf... [more]
XP_011087346.18.200e-3940.38DNAJ protein JJJ1 homolog [Sesamum indicum][more]
AGB51053.11.100e-3835.79HSP40-like protein, partial [Botryllus schlosseri]... [more]
XP_019620561.11.100e-3839.39PREDICTED: dnaJ homolog subfamily C member 21-like... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR098ncniR098Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000313NSK000313Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01210.1NO06G01210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|410335gene_10670Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01210.1NO06G01210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01210 ID=NO06G01210|Name=NO06G01210|organism=Nannochloropsis oceanica|type=gene|length=3562bp
CCAAGGTGCTTTCGCTTCTTTCATTCTTGTGGGTTCAGCCATGGCGCTCA
CAATGACATTAAAATGTAACACCGTTTTTCTCTTTCTCTTTGGTTTCCAA
ACGAACTCTGCCCAAAGTTTTCTTGTTTCATCCAAGTTTGGAATTGAGCT
AACACATCCCTGCTCTCATCCTACCCTGGCCTATAGAGCCTTGGTTGCTG
CAGCAGCCTGCAGCGAGGGCCCATCTCGGACGGATCTTGCACGAGATCAA
GAGCGTGTGGCTGATCAAATGGCATGAGATCCTTGCTTGAGGACATACCT
CAACATTATAGAAGAGACCTTTGTGCCGGTTTTTGCGATCTTCGTGGCCA
ATTGTATTTATCGTGGTCTGGGATGGGGGAGGTCGAGAGTATTGAACGCG
AGCGACCGTTGATGGTATGATGATTGCTTCACTATGCGAAGCAATGCAAA
CAACTAATAACACCACGATGTACGCTGCATGCACAGGGCCGGAGAGCAAG
CAGCGGTATTGCGTTGTTTTATGTCTCGCACCGGGAAGGAATGTTACTAT
GCTGTGTTGGGAGTGGAGAGgtaagggcaagatgggatgggatgcagggg
acgtaagctgctctggtacttgacgctgcggcgacagtatttatgataga
gcactaatgctgccatagcaataagaaagattggatgacacccaaagtag
tcgcgagggcgtgcccagaccgtaaggtgtgtttagtttatctcgatcct
ccgcacgatcccatcctaccctatgcgactcccacaacactgaccctgaa
cagGAGTGCCACGGACGCGGAGATCAAGCTCGCTTACAGAAAGgtgcgtt
gcttttcattccacatgcgcctttcctccgcccagtctgcctcaccgcag
ctgcaactaaatctgacacacattcccttcctccctccctccccctacct
tcctccctcccccctaccgtccctcgctctcccgcagCTTGCCCTCAAGC
ATCATCCGGATAAGAATGTAGGCGACGAGGGGGCAACAGCAATTTTTCAA
CGCCTCCAAGAGGCAAACTCCGTACTGAGTGACAAGCGGGAGCGGGCTTG
GTATGATTCACATCGAGATCAGATACTCAGGGGGGACGACTATGATGATG
ATGACGAGGGGGAGGAGAGAAGTGGAGGGAGAGGAAGCGGAAGACGAGGA
GGAGTCGGAGGAGCAAAACGGGGCAAGGGTGCATATGTCGTGAATGTCTG
GCCTTTTTTCAGCAGTTCGGCTTTTAGCGGGTATGGGGAGGGAGAGGGGG
GTTTCTATGCAGTCTACAGAGAATTGTTTGTAAAGATTGATGTCCACGAG
AGGGAAAAAGGAATACCCTCACCGCCAATCGCACGAGGAGGAGGAGCAGC
AGGAGGGGAGGGAGAGGCACCTGGCTTTGGTGGGCCGGAGACGGGGTGGG
GGGGGGTAGCTGCGTTTTATGGGTATTGGGGTGATTTCTGCTCGAGACTG
TCGTTTGGATGGGCGGACGAGTACAGGGAGCAAGATGCCCCCTCGAGGCA
AGTGAGGCGGGCGATGGAGAAGGAGAATAAGAAAAGCAGGGAGGCTGCGC
GGAAAAAGTACCAGGAGGCGATCCGGGCGCTGGTGGAGTTTGTGAAGAAG
AGGGACAAGCGCGTGATGCAGCGGCAGGTCGAGGTAGGGAGGGAGGAAGC
GGCACGGGTGGCGACGGAGGCGAAGGGGGCCAAGTTGAAAGCAGAGGAAT
TTAAGAAGGAGAAGGAGAGATGGCTGAGGGAGCAGATGCAGCAGTGGGAG
GAGGAGGAGTCGGCGAGGAGAGAGGAGGAGGGGATAGGAGGATCGGCTGA
ATTTCGGTTGGCGGATGAGGACGAGGACAGTAGTAGTAGCAGTGATAGGG
AGGACGGGGGGGAGGAAGGGAGCAGTAGGAGGTGGAAGCCAAGGCGGGGA
AAGAAGAAGAAGAATGCTGGGGTGTTCGAGTGTGTGGTGTGCGATAAGAA
GTTTAAGAGTGAGAAGCAGCTGAACAATCATAAGCAAAGCCGGACACACA
AAAGGATGGTTGAGGAGCTGCAGGCGGAATTCGGAGATCTGGAAGGATTA
AATGAGGAGGACGAGGAAAGGGAGGAGGAAGTGGAAGAGGGGAAAAAAGG
GTCGATGTTTGAGTGTGTGGTGTGTGCGAAGGTGTTTTTGTCAGAGAAAC
AGCTGAAAACCCATAAGCAGAGTCGCACGCATGGGAAGATGGTGGAGCAG
CTGCAAGCGGAGTCGGAGGACTTGGAAGGGTTAAAGGAGAGTGAAGAAGG
ACAGGAGGAAGAAGAGGAGGAGGAGGAGGGGCTTGTGAGTGGCGAAATCG
TTGCTGAAGACGGAAAAGGAGCGAAGGGATTGAGGGACGAGCGGGATGGG
GAGGGAGTAGAGAAGGAAGATGGAAGCGAGGACTACGCCAAGGATGGCGT
GCAGGACGAAGAGAAGGAGGAAGAAGAGGATGAGAAAGAGGATGAAGAGG
GAGAGGAAAGCAGCAGTGACGATGGCGTGGAGCACGCAGCGCGTCAAGTG
AATCGATTTGCCTTGGTCGATGATTCATCATCGGAGGAGGATTAGGGTGG
TCATGCAAACATGTGTGTAAGTGATGCTCTCTTTGGGGGAATAGCATGTC
TACAGGCATTTGAATCAGGGAATGGGTGAAAGAGCTTTAGCCTTCTCGAG
AAGCCAAGCTGGTTGTAAAATTGTACGCACACACATGAAGTGAAAATAAA
TATTTTATAGAGGTTGAACCCCCCCTATCCGATTTATGCAAGTATTTACT
TATTTTTGACTCCTATTAATTCACACATAGACCTGCTAAGCAAATACTAA
AACATTTGCCTCACATTCTCCCCATCCCTCCTTTCTCCTTAAACCACACG
GTACCGCTCCGCGGGCCCACACCCGTCACTCAATCCCTCCTCCACAATGT
ACATATCCTCAGCCTCTTCCCCATGCGGATTGATTTTTCGATCTTCAACG
CATCGCTGCTGATACCACACATGACTAAGCACCCGTATAACAAGGCCTGG
CACGTCTTCTTCTAATGCGTCTTGGTCCTCGTCGTAGAAGAGTTCTTCGG
ACTCCGGGCTCCGTCGACACAGCGGGTGAATGTGCATGAACTGATTAATG
ACGCCCAAACCAAGCAACCGTGTATCTCCGGGTGGCAACTGTCCTTTGCT
GCGCTGAGCCTCGGTAATCCGGTACTCGACGACGTCGCCTTCGAGGAGCT
CGTGAGGTGCGAAGGGCGAGGTTGAGGGAGTGATGGGTGTAGATGTGCTT
TTGGGGTTTGAGGGTGTCGTCCCCCACAGAGGAGAAAATGCTGAGACACG
TGACCTCTCTGGTATGTGTCGCGTTGTCGAAGGTCTATGGGAGAAGCGCT
GATGCCAACTGGGGGGGTGCGAGTGACGTGCAGGTCGTGTATGAATGTCG
AAATGGATTATCGTATTAACTTGGCTTTTCGGTTCTTACCTCGTGCTCGA
GCCAACCAAGCTCAGCAGCAGCACCAGCAGCGCTGGAAGCTTCTCTGCCC
TCATGTGCCTGT
back to top

protein sequence of NO06G01210.1

>NO06G01210.1-protein ID=NO06G01210.1-protein|Name=NO06G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=580bp
MHRAGEQAAVLRCFMSRTGKECYYAVLGVERSATDAEIKLAYRKLALKHH
PDKNVGDEGATAIFQRLQEANSVLSDKRERAWYDSHRDQILRGDDYDDDD
EGEERSGGRGSGRRGGVGGAKRGKGAYVVNVWPFFSSSAFSGYGEGEGGF
YAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGG
VAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKSREAARK
KYQEAIRALVEFVKKRDKRVMQRQVEVGREEAARVATEAKGAKLKAEEFK
KEKERWLREQMQQWEEEESARREEEGIGGSAEFRLADEDEDSSSSSDRED
GGEEGSSRRWKPRRGKKKKNAGVFECVVCDKKFKSEKQLNNHKQSRTHKR
MVEELQAEFGDLEGLNEEDEEREEEVEEGKKGSMFECVVCAKVFLSEKQL
KTHKQSRTHGKMVEQLQAESEDLEGLKESEEGQEEEEEEEEGLVSGEIVA
EDGKGAKGLRDERDGEGVEKEDGSEDYAKDGVQDEEKEEEEDEKEDEEGE
ESSSDDGVEHAARQVNRFALVDDSSSEED*
back to top
Synonyms
Publications