NO06G00270, NO06G00270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G00270 vs. NCBI_GenBank
Match: EWM26484.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 106.3 bits (264), Expect = 1.200e-19 Identity = 76/192 (39.58%), Postives = 101/192 (52.60%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPG 189 MR ALSL+ LGVT T TA L L SI+ VD + NKD W +KG +NDP + A G TGLT L + D ++ F A DCR+ + + CK+ GAR+S+K T R PK + ++ + YY V+G FR F EN + SPL AA I G+ +SD C + + R T C PG Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIK-TSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGS-VLSDTLTSCYDLARKSGRNTISHCEPG 190
BLAST of NO06G00270 vs. NCBI_GenBank
Match: EWM26485.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 106.3 bits (264), Expect = 1.200e-19 Identity = 76/192 (39.58%), Postives = 101/192 (52.60%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPG 189 MR ALSL+ LGVT T TA L L SI+ VD + NKD W +KG +NDP + A G TGLT L + D ++ F A DCR+ + + CK+ GAR+S+K T R PK + ++ + YY V+G FR F EN + SPL AA I G+ +SD C + + R T C PG Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIK-TSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGS-VLSDTLTSCYDLARKSGRNTISHCEPG 190
BLAST of NO06G00270 vs. NCBI_GenBank
Match: EWM27399.1 (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 104.4 bits (259), Expect = 4.500e-19 Identity = 74/192 (38.54%), Postives = 101/192 (52.60%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGA--DEISDINYKCTEKVGTRATKFLCTPG 189 MR LSL+ALG+TL T TA L L SI+AVD + NKD W +KG +NDP + A G GLT L + D ++ F A DCR+ + + CK+ GAR+S+K T R PK + ++ + YY V+G FR F EN + SPL AA ++ + + + Y K G R T C PG Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIK-TSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTVDESVLSDTLTLCYNLPRKNG-RNTISHCEPG 190
BLAST of NO06G00270 vs. NCBI_GenBank
Match: EWM20775.1 (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana]) HSP 1 Score: 100.1 bits (248), Expect = 8.500e-18 Identity = 69/192 (35.94%), Postives = 100/192 (52.08%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPG 189 MR A S +A+G+T + TA L L SI+AVD + ANKD W +KG ++DP + TGL L +G D ++ F A DCR+ N + CK+ GAR+S+K ++R PK + + + YYRV+G R F E+ + SPL A + G D +SD C + ++ R T C PG Sbjct: 1 MRSAFSFLAVGITFGSSLVTTAGQDLNLKSIRAVDRSVANKDTWKMKGKIDDPSMTIVPEIAQTGLIVELQDGGSDPLNTVTFAASDCRVPTNGRRATCKIRGARVSIKSSRR-PKLKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSPLTAKLTVNG-DVLSDTLTSCYDLPRMNGRNTITHCEPG 190
BLAST of NO06G00270 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana]) HSP 1 Score: 99.4 bits (246), Expect = 1.400e-17 Identity = 65/161 (40.37%), Postives = 88/161 (54.66%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALT-AAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGI 160 MR LSL+ALG+TL T T +L L SI+AVD + NKD W +KG +NDP + G GLT L + D ++ F A DCR+ + K CK+ GAR+ +K ++R + V R +T YY V+G FRR F EN + SPL AA + Sbjct: 69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIKTSRRPKINTPKTVHAKRYNST-GGYYSVTGTFRRLTFLENPVVSPLTAALTV 228
BLAST of NO06G00270 vs. NCBI_GenBank
Match: EWM25644.1 (hypothetical protein Naga_100037g5 [Nannochloropsis gaditana]) HSP 1 Score: 93.2 bits (230), Expect = 1.000e-15 Identity = 54/156 (34.62%), Postives = 85/156 (54.49%), Query Frame = 0 Query: 37 RANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADE----ISDINYKCTE--KVGTRATKFLC 186 +A +D+W++ G+ NDP A++ G G+ A+L + + +S T F C+ LNN +GV CK TGARL LK+T KD + RN ++ ++Y+V GVFRR F + + +PL F ++ + + +CTE K G + TK C Sbjct: 163 KAKRDRWTITGFFNDPAETAVVNIGQYGIIAVLQDAAKKALSSTFFTPPQCKALNNIRGVTCKTTGARLRLKKT----KDPSV-----RNKSSEGAFYKVKGVFRRLTFLQQPVQTPLTTIFAVQFPNTTTVFTTSATEQCTEKGKTGGKKTKIDC 309
BLAST of NO06G00270 vs. NCBI_GenBank
Match: XP_005854458.1 (glycosyl hydrolase [Nannochloropsis gaditana CCMP526] >EKU21904.1 glycosyl hydrolase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.2 bits (178), Expect = 1.100e-9 Identity = 50/147 (34.01%), Postives = 74/147 (50.34%), Query Frame = 0 Query: 45 VKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPG 189 +KG ++DP + A TGLT L + D ++ F A DCR+ + + CK+ GAR+S+K T R PK + ++ + YY V+G FR F EN + SPL AA + G+ +SD C + + R T C PG Sbjct: 1 MKGSISDPSLTIVSAIRQTGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIK-TSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLAAALRVNGS-VLSDTLTSCYDLARKSGRNTITHCEPG 145 The following BLAST results are available for this feature:
BLAST of NO06G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00270 ID=NO06G00270|Name=NO06G00270|organism=Nannochloropsis oceanica|type=gene|length=633bpback to top protein sequence of NO06G00270.1 >NO06G00270.1-protein ID=NO06G00270.1-protein|Name=NO06G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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