NO05G05060, NO05G05060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_014687227.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X5 [Equus asinus]) HSP 1 Score: 93.2 bits (230), Expect = 5.200e-15 Identity = 94/347 (27.09%), Postives = 148/347 (42.65%), Query Frame = 0 Query: 398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711 P+ PR GL+N G TCY NS++QQL+ + R S+L ++G + + + E + + D G E + + E+ K+ GV V L +P WG+ V EQ+D+ E L++ L + L+ G D+ +GC H ++F TL V +R L+++L ++ +G + +G A C C+ + +LPPV+A QL+RF++ + + K F FP LDM PYT G A+ + D P + E E + YRLVGVL+H G + GHY Sbjct: 1523 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTDSDTDDDMFGEEKQDSESNVDPRDDVFGYPHQFEDKPALSKT-EDRKDYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVRGVAKLEGDNVNPDSQLIQQNEQSESETAGSTKYRLVGVLVHSGQA-SGGHY 1856
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_015360703.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X [Marmota marmota marmota]) HSP 1 Score: 93.2 bits (230), Expect = 5.200e-15 Identity = 97/347 (27.95%), Postives = 149/347 (42.94%), Query Frame = 0 Query: 398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711 P+ PR GL+N G TCY NS++QQL+ + R S+L ++G + + E + D G E + V+ E+ KE GV V L +P WG+ V EQ+D+ E L++ L + L+ G D+ +GC H ++F TL V VR L+++L ++ +G + +G A C C+ + +LPPV+A QL+RF++ + + K F FP LDM PYT G A+ + D + G++E E + YRLVGVL+H G + GHY Sbjct: 1439 PVGPRPPEGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILTVEGTGSDIDDDMFGDEKQDIENNVDPRDDVFGYPHQFEDKPVLSKT-EDRKEYNIGVLRHLQVIFGHLAASQLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDVRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVAGVAKLEGDNINSESQLIGQKEQSESENTRNTKYRLVGVLVHSGQA-SGGHY 1772
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_020741130.1 (probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2 [Odocoileus virginianus texanus]) HSP 1 Score: 93.2 bits (230), Expect = 5.200e-15 Identity = 96/347 (27.67%), Postives = 147/347 (42.36%), Query Frame = 0 Query: 398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711 P+ PR GL+N G TCY NS++QQL+ + R S+L ++G + + E + + D G E + + E+ KE GV V L +P WG+ V EQ+D+ E L++ L + L+ G D+ +GC H ++F TL V +R L+++L ++ +G + +G A C C+ + +LPPV+A QL+RF++ + + K F FP LDM PYT G AR + D P+ + E D YRLVGVL+H G + GHY Sbjct: 1547 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDIDDDMFGDEKQDSESNVDPRDDVFGYPHQFEDKPALNKT-EDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVPGVARLEGDNVNPESQLMEQNEQSGSDTAGNTKYRLVGVLVHSGQA-SGGHY 1880
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_020741128.1 (probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1 [Odocoileus virginianus texanus]) HSP 1 Score: 93.2 bits (230), Expect = 5.200e-15 Identity = 96/347 (27.67%), Postives = 147/347 (42.36%), Query Frame = 0 Query: 398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711 P+ PR GL+N G TCY NS++QQL+ + R S+L ++G + + E + + D G E + + E+ KE GV V L +P WG+ V EQ+D+ E L++ L + L+ G D+ +GC H ++F TL V +R L+++L ++ +G + +G A C C+ + +LPPV+A QL+RF++ + + K F FP LDM PYT G AR + D P+ + E D YRLVGVL+H G + GHY Sbjct: 1547 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDIDDDMFGDEKQDSESNVDPRDDVFGYPHQFEDKPALNKT-EDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVPGVARLEGDNVNPESQLMEQNEQSGSDTAGNTKYRLVGVLVHSGQA-SGGHY 1880
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_015449470.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X [Pteropus alecto]) HSP 1 Score: 92.8 bits (229), Expect = 6.700e-15 Identity = 96/347 (27.67%), Postives = 148/347 (42.65%), Query Frame = 0 Query: 398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711 P+ PR GL+N G TCY NS++QQL+ + R S+L ++G + + E + + D G E + + E+ KE GV V L +P WG+ V EQ+D+ E L++ L + L+ G D+ +GC H ++F TL V +R L+++L ++ +G + +G A C C+ + +LPPV+A QL+RF++ + + K F FP LDM PYT G A+ + D P + E E +V YRLVGVL+H G + GHY Sbjct: 67 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDIDDDMFGEEKQDSESNVDPRDDVFGYPHQFEDKPALSKT-EDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAILSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVLGVAKLEGDNVNPDSHLVQQNEQSESEVAESTKYRLVGVLVHSGQA-SGGHY 400
BLAST of NO05G05060 vs. NCBI_GenBank
Match: OMJ95993.1 (hypothetical protein SteCoe_558 [Stentor coeruleus]) HSP 1 Score: 92.8 bits (229), Expect = 6.700e-15 Identity = 84/324 (25.93%), Postives = 140/324 (43.21%), Query Frame = 0 Query: 403 GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALVQALAVALPEWGDE---VWEQNDSTEVLMFLLERLGGGVGGRALASCFR---GRLQ--DRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKDPQGVGEGEREGGEEDVVPRAW------YRLVGVLMHRGSSPQEGHY 711 GL+N GN CY NS LQQLF+ + +L K ++ V+ A L+ + GL K+ + L A +W + V++Q D+ E L++++ + G A C + G +Q + I + C H ++F+TLPV V+ + L+E+L + G + +G A C C+ + LP ++ L+RFEF D V KV FP+ +DM PYT+EG R + + E ++G ++ PR + + L G+ +H G++ + GHY Sbjct: 1336 GLKNIGNICYMNSNLQQLFSIPTFCEQILSTKDISENKDDSVLYA---------------------LQFIFSGLKNSAKQ-------YTNPKKLCGAFKDWEGKPLNVYDQMDADEFFNNLMDKIEIAMKGGPNAQCIKNHFGGIQATECIGKNTCSHRSETNESFLTLPVQVKN---KKSLLESLESFVEGEVL----EGDNAYQCDYCDTKVAALRRVCIKHLPNILIIVLRRFEFNFDTMNRV----KVNDYCEFPLEIDMEPYTQEGLERK----EAIKELMKDGPGKETPPRKYPDEYYKFALKGITIHTGTA-ESGHY 1615
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_004376984.1 (probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2 [Trichechus manatus latirostris]) HSP 1 Score: 92.4 bits (228), Expect = 8.800e-15 Identity = 96/351 (27.35%), Postives = 151/351 (43.02%), Query Frame = 0 Query: 398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKA------DKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711 P+ PR GL+N G TCY NS++QQL+ + R +L ++ G V + +S E++ ++ D G E + + E+ KE GV V L +P WG+ V EQ+D+ E L++ L + L+ G D+ +GC H ++F TL V +R L+++L ++ +G + +G A C C + +LPPV+A QL+RF++ + + K F FP LDM PYT G A+ ++D P+ + E E + YRLVGVL+H G + GHY Sbjct: 1547 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIE----GTGSDVDDDMSGDEKQDNESNVDPRDDVFGYPQQFEDKPALSKT-EDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYVKGDLL----EGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVAGVAKLERDNVNPESQLIQQNEQSESETAGSTKYRLVGVLVHSGQA-SGGHY 1880
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_004376985.1 (probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4 [Trichechus manatus latirostris]) HSP 1 Score: 92.4 bits (228), Expect = 8.800e-15 Identity = 96/351 (27.35%), Postives = 151/351 (43.02%), Query Frame = 0 Query: 398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKA------DKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711 P+ PR GL+N G TCY NS++QQL+ + R +L ++ G V + +S E++ ++ D G E + + E+ KE GV V L +P WG+ V EQ+D+ E L++ L + L+ G D+ +GC H ++F TL V +R L+++L ++ +G + +G A C C + +LPPV+A QL+RF++ + + K F FP LDM PYT G A+ ++D P+ + E E + YRLVGVL+H G + GHY Sbjct: 1547 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIE----GTGSDVDDDMSGDEKQDNESNVDPRDDVFGYPQQFEDKPALSKT-EDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYVKGDLL----EGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVAGVAKLERDNVNPESQLIQQNEQSESETAGSTKYRLVGVLVHSGQA-SGGHY 1880
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_007951741.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X [Orycteropus afer afer]) HSP 1 Score: 92.4 bits (228), Expect = 8.800e-15 Identity = 97/351 (27.64%), Postives = 151/351 (43.02%), Query Frame = 0 Query: 398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKA------DKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711 P+ PR GL+N G TCY NS++QQL+ + R +L ++ G V + +S E++ ++ D G E + V+ E+ KE GV V L +P WG+ V EQ+D+ E L++ L + L+ G D+ +GC H ++F TL V +R L+++L ++ +G + +G A C C + +LPPV+A QL+RF++ + + K F FP LDM PYT G A+ + D P+ + E E + YRLVGVL+H G + GHY Sbjct: 1501 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIE----GTGSDVDDDMSGDEKQDNESNVDPRDDVFGYPQQFEDKPVLSKT-EDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYVKGDLL----EGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSESETAGSTRYRLVGVLVHSGQA-SGGHY 1834
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_013754144.1 (ubiquitin carboxyl-terminal hydrolase 34 [Thecamonas trahens ATCC 50062] >KNC53941.1 ubiquitin carboxyl-terminal hydrolase 34 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 92.4 bits (228), Expect = 8.800e-15 Identity = 86/314 (27.39%), Postives = 136/314 (43.31%), Query Frame = 0 Query: 403 GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALVQALAVALPEWGDEVWEQNDSTEVLMFLLERLGGGVGGRALASCFR----GRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKACAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKDPQGVGEGEREGGEEDVVPRAWYR--LVGVLMHRGSSPQEGHY 711 GLRNQG TCY N+ LQQL+ R+++L E E+ + + + + + +E + W E + + K G+ ++ R +Q D+ E L+++L + G F GR ++I + C H R + + F+T+ V V+ + L E L + + K C C+ + LP ++A L RFEF+ + V KV F FPM LDM PYT+EG A + P +E V P ++Y+ LVG+L+H GS+ GHY Sbjct: 1862 GLRNQGCTCYMNATLQQLYIIPQLREAILKAPIDEKLSEEELKGNIMFQLQLLFAYMQESKTSWVETIDFCKTV----KLNGQTINVR------------------QQEDANEFFNSLVDQLEPFIKGTEAEEMFNLAFGGRFINQIISQDCKHTREREEDFLTMTVKVQG---KRNLEEGLNSFVDADVLDGNNK--YHCEDCDAKVTARKRCCIQHLPNLLALHLCRFEFSFETFQNV----KVYDHFEFPMDLDMRPYTKEGLAAKEGTPI---------ADELVRPDSYYQYELVGILIHSGSA-NAGHY 2134 The following BLAST results are available for this feature:
BLAST of NO05G05060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G05060 ID=NO05G05060|Name=NO05G05060|organism=Nannochloropsis oceanica|type=gene|length=3283bpback to top protein sequence of NO05G05060.1 >NO05G05060.1-protein ID=NO05G05060.1-protein|Name=NO05G05060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1054bpback to top Synonyms
Publications
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