NO05G05060, NO05G05060 (gene) Nannochloropsis oceanica

Overview
NameNO05G05060
Unique NameNO05G05060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3283
Alignment locationchr5:1319950..1323232 -

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquitin carboxyl-terminal hydrolase 34
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1319950..1323232 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0004197cysteine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR028889USP_dom
IPR001394Peptidase_C19_UCH
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_002592988.1 (hypothetical protein BRAFLDRAFT_275724 [Branchiostoma floridae] >EEN48999.1 hypothetical protein BRAFLDRAFT_275724 [Branchiostoma floridae])

HSP 1 Score: 97.1 bits (240), Expect = 3.600e-16
Identity = 94/344 (27.33%), Postives = 152/344 (44.19%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKA--DKEGQRLWTELEGVMEGLGEEGKEGGRGV--DTRALVQALAVA-----LPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVG----GRALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKDPQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   + R  +L     EG     + E LS  E++  ++  D   +R    ++    G  E  KE   GV    +A+   LA +     +P         WG+ V   EQ+D+ E    L++ L   +        L+    G   D+   + C H   + ++F TL V +R       L+++L ++ +G  +    +G  A  C  C           + +LP V+A QL+RF++  +    +    K    F FP   DM PYT +G A+ + + +  G+ E    E+   P   YRL G+L+H G +   GHY
Sbjct: 1543 PVGPRPVKGFVGLKNAGATCYMNSVIQQLYMINSVRSGILT---AEGAANDNMDEELSGDEKQDSESNIDPGEERESFHMDDKPSGKQEGRKEYDMGVLRQIQAIFGHLAASKLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKTLGYTPVLSKVLGGSFADQKICKDCPHRYSREESFTTLNVDIRN---HSNLLDSLEQYVKGDLL----EGANAYHCEKCNKKVDTVKRMCIKKLPQVLAIQLKRFDYDWERECAI----KFNDYFEFPREFDMEPYTVKGLAKIEGE-EIHGDDESPDNEDAEPPSTKYRLTGILVHSGQA-SGGHY 1870          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: OMJ73017.1 (hypothetical protein SteCoe_28394 [Stentor coeruleus])

HSP 1 Score: 95.9 bits (237), Expect = 8.000e-16
Identity = 83/320 (25.94%), Postives = 140/320 (43.75%), Query Frame = 0
Query:  403 GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALVQALAVALPEWGDE---VWEQNDSTEVLMFLLERLGGGVGGRALASCFR---GRLQ--DRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKDPQGVGEGEREGGEEDVVPRAWYR--LVGVLMHRGSSPQEGHY 711
            GL+N GN CY NS LQQLF+     + +L  K     ++  ++ A                     L+ +  GL    K+           + L  A  +W  +   V++Q D+ E    L++++   + G + A C +   G +Q  + I +  C H   + ++F+TLPV V+    +  L+E+L  +  G  +    +G  A  C  CE          +  LP ++   L+RFEF  D    V    KV     FP+ +DM PYT+EG  R +   + + +G  +       P  +Y+  L G+ +H G++ + GHY
Sbjct: 1336 GLKNIGNICYMNSNLQQLFSIPTFCEQILSTKDTSENKDDSILYA---------------------LQFIFSGLKSSAKQ-------YTSPKKLCGAFKDWDGKPLNVYDQMDADEFFNNLMDKIETSMKGGSNAQCIKNHFGGIQTTECIGKNTCSHRSERNESFLTLPVQVKN---KKSLLESLESFVEGEIL----EGDNAYQCDYCETKVTALRRVCIKHLPNILIIVLRRFEFNFDTMNRV----KVNDYCEFPLEIDMEPYTQEGLERKEAIKELMKDGTGKEIPSKKFPDEYYKFSLKGITIHTGTA-ESGHY 1615          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_008540125.1 (PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X [Equus przewalskii])

HSP 1 Score: 94.4 bits (233), Expect = 2.300e-15
Identity = 95/347 (27.38%), Postives = 148/347 (42.65%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   + R S+L ++G +   +  V   E   +      + D  G     E +  +    E+ K+   GV     V         L   +P         WG+ V   EQ+D+ E    L++ L   +        L+    G   D+   +GC H     ++F TL V +R       L+++L ++ +G  +    +G  A  C  C+          + +LPPV+A QL+RF++  +    +    K    F FP  LDM PYT  G A+ + D   P      + E  E +      YRLVGVL+H G +   GHY
Sbjct: 1548 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTDSDTDDDVFGEEKQDSESNVDPRDDVFGYPHQFEDKPALSKT-EDRKDYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVRGVAKLEGDNVNPDSQLIQQNEQSESETAGSTKYRLVGVLVHSGQA-SGGHY 1881          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_007665446.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2 [Ornithorhynchus anatinus])

HSP 1 Score: 94.0 bits (232), Expect = 3.000e-15
Identity = 92/345 (26.67%), Postives = 146/345 (42.32%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   A R  +L             +E   +  ++    D++ +  + +   + +   E+ KE   GV     V         L   +P         WG+ V   EQ+D+ E    L++ L   +        L+    G   D+   +GC H     ++F TL V +R       L+++L ++ +G  +    +G  A  C  C           + +LPPV+A QL+RF++  +    +    K    F FP  LDM PYT  G A+ + D   P+     + E  E +      YRLVGVL+H G +   GHY
Sbjct: 1547 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPAIRNGIL------------AIEGTGSDVDDDMSGDEKQENEYEDKPALSK--TEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYVKGDLL----EGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQLIQQNEQSENEPSGSTKYRLVGVLVHSGQA-SGGHY 1865          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_008151282.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X [Eptesicus fuscus])

HSP 1 Score: 94.0 bits (232), Expect = 3.000e-15
Identity = 89/328 (27.13%), Postives = 139/328 (42.38%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALVQALAVALPEWGDEVWEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   + R  +L ++    G    V + +S  E++  + + E  RLW                 G  V+ R                  EQ+D+ E    L++ L   +        L+    G   D+   +GC H     ++F TL V +R       L+++L ++ +G  +    +G  A  C  C           + +LPPV+A QL+RF++  +    +    K    F FP  LDM PYT  G A+ + D   P+     + E  E +      YRLVGVL+H G +   GHY
Sbjct: 1547 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIE----GTGSDVDDDMSGDEKQDNEVNVE--RLW-----------------GEPVNLR------------------EQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYVKGDLL----EGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVAGVAKLEGDNVTPESQLIQQNEQSESEAAGSTKYRLVGVLVHSGQA-SGGHY 1821          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_021563023.1 (probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1 [Carlito syrichta])

HSP 1 Score: 93.6 bits (231), Expect = 4.000e-15
Identity = 97/351 (27.64%), Postives = 151/351 (43.02%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSAREEETWKA------DKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   + R  +L ++    G    V + +S  E++  ++      D  G     E +  +    E+ KE   GV     V         L   +P         WG+ V   EQ+D+ E    L++ L   +        L+    G   D+   +GC H     ++F TL V +R       LV++L ++ +G  +    +G  A  C  C           + +LPPV+A QL+RF++  +    +    K    F FP  LDM PYT  G A+ ++D   P+     + E  E +      YRLVGVL+H G +   GHY
Sbjct:   70 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIE----GTGSDVDDDMSGDEKQDNESNVDPRDDVFGYPQQFEDKPALSKT-EDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLVDSLEQYVKGDLL----EGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVAGVAKLERDNVNPESQLIQQNEQSESETTGSTKYRLVGVLVHSGQA-SGGHY 403          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_014687223.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1 [Equus asinus])

HSP 1 Score: 93.2 bits (230), Expect = 5.200e-15
Identity = 94/347 (27.09%), Postives = 148/347 (42.65%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   + R S+L ++G +   +  +   E   +      + D  G     E +  +    E+ K+   GV     V         L   +P         WG+ V   EQ+D+ E    L++ L   +        L+    G   D+   +GC H     ++F TL V +R       L+++L ++ +G  +    +G  A  C  C+          + +LPPV+A QL+RF++  +    +    K    F FP  LDM PYT  G A+ + D   P      + E  E +      YRLVGVL+H G +   GHY
Sbjct: 1553 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTDSDTDDDMFGEEKQDSESNVDPRDDVFGYPHQFEDKPALSKT-EDRKDYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVRGVAKLEGDNVNPDSQLIQQNEQSESETAGSTKYRLVGVLVHSGQA-SGGHY 1886          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_014687224.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2 [Equus asinus])

HSP 1 Score: 93.2 bits (230), Expect = 5.200e-15
Identity = 94/347 (27.09%), Postives = 148/347 (42.65%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   + R S+L ++G +   +  +   E   +      + D  G     E +  +    E+ K+   GV     V         L   +P         WG+ V   EQ+D+ E    L++ L   +        L+    G   D+   +GC H     ++F TL V +R       L+++L ++ +G  +    +G  A  C  C+          + +LPPV+A QL+RF++  +    +    K    F FP  LDM PYT  G A+ + D   P      + E  E +      YRLVGVL+H G +   GHY
Sbjct: 1548 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTDSDTDDDMFGEEKQDSESNVDPRDDVFGYPHQFEDKPALSKT-EDRKDYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVRGVAKLEGDNVNPDSQLIQQNEQSESETAGSTKYRLVGVLVHSGQA-SGGHY 1881          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_014687225.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X3 [Equus asinus])

HSP 1 Score: 93.2 bits (230), Expect = 5.200e-15
Identity = 94/347 (27.09%), Postives = 148/347 (42.65%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   + R S+L ++G +   +  +   E   +      + D  G     E +  +    E+ K+   GV     V         L   +P         WG+ V   EQ+D+ E    L++ L   +        L+    G   D+   +GC H     ++F TL V +R       L+++L ++ +G  +    +G  A  C  C+          + +LPPV+A QL+RF++  +    +    K    F FP  LDM PYT  G A+ + D   P      + E  E +      YRLVGVL+H G +   GHY
Sbjct: 1553 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTDSDTDDDMFGEEKQDSESNVDPRDDVFGYPHQFEDKPALSKT-EDRKDYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVRGVAKLEGDNVNPDSQLIQQNEQSESETAGSTKYRLVGVLVHSGQA-SGGHY 1886          
BLAST of NO05G05060 vs. NCBI_GenBank
Match: XP_014687226.1 (PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4 [Equus asinus])

HSP 1 Score: 93.2 bits (230), Expect = 5.200e-15
Identity = 94/347 (27.09%), Postives = 148/347 (42.65%), Query Frame = 0
Query:  398 PMRPR------GLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVV--EALSAREEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALV-------QALAVALPE--------WGDEV--WEQNDSTEVLMFLLERLGGGVGG----RALASCFRGRLQDRIYQEGCGHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGXXRKGGKA--CAVCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPFPMVLDMWPYTREGKARSQKD---PQGVGEGEREGGEEDVVPRAWYRLVGVLMHRGSSPQEGHY 711
            P+ PR      GL+N G TCY NS++QQL+   + R S+L ++G +   +  +   E   +      + D  G     E +  +    E+ K+   GV     V         L   +P         WG+ V   EQ+D+ E    L++ L   +        L+    G   D+   +GC H     ++F TL V +R       L+++L ++ +G  +    +G  A  C  C+          + +LPPV+A QL+RF++  +    +    K    F FP  LDM PYT  G A+ + D   P      + E  E +      YRLVGVL+H G +   GHY
Sbjct: 1548 PVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTDSDTDDDMFGEEKQDSESNVDPRDDVFGYPHQFEDKPALSKT-EDRKDYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN---HQNLLDSLEQYIKGDLL----EGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAI----KFNDYFEFPRELDMEPYTVRGVAKLEGDNVNPDSQLIQQNEQSESETAGSTKYRLVGVLVHSGQA-SGGHY 1881          
The following BLAST results are available for this feature:
BLAST of NO05G05060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002592988.13.600e-1627.33hypothetical protein BRAFLDRAFT_275724 [Branchiost... [more]
OMJ73017.18.000e-1625.94hypothetical protein SteCoe_28394 [Stentor coerule... [more]
XP_008540125.12.300e-1527.38PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin... [more]
XP_007665446.13.000e-1526.67PREDICTED: probable ubiquitin carboxyl-terminal hy... [more]
XP_008151282.13.000e-1527.13PREDICTED: probable ubiquitin carboxyl-terminal hy... [more]
XP_021563023.14.000e-1527.64probable ubiquitin carboxyl-terminal hydrolase FAF... [more]
XP_014687223.15.200e-1527.09PREDICTED: probable ubiquitin carboxyl-terminal hy... [more]
XP_014687224.15.200e-1527.09PREDICTED: probable ubiquitin carboxyl-terminal hy... [more]
XP_014687225.15.200e-1527.09PREDICTED: probable ubiquitin carboxyl-terminal hy... [more]
XP_014687226.15.200e-1527.09PREDICTED: probable ubiquitin carboxyl-terminal hy... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR078ncniR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003341NSK003341Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G05060.1NO05G05060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|664778gene_3323Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G05060.1NO05G05060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G05060 ID=NO05G05060|Name=NO05G05060|organism=Nannochloropsis oceanica|type=gene|length=3283bp
ACCACAGGAGATCCATGGGCATCGACAGCGGGACGTCTCCACCGTCCTCC
CCGTTGCCAGCACACTCTTTACCGCAATCACCAGgtaaagttacggaagc
catgtcgaagccattgattgaccttccctccccctcccctccccctcctt
tccaatgcccctcatccctctatcccctccctcttgtacagCCATTATCG
CCTGGCCTGGTAGCAGTAGTAAGAATAAGAAGGCCGCGCCGCCCGTCCAT
CCACCATCAGGAAAGCCTTCCTTGTTGTCCAACCTCGGTCGGCTTTTCCA
CCGGGGTCCCTGGTTGGAGGAAGTGGAGGAGCTTGAGGACGAGGAGGAGG
AAGAGGGGGAGGGGTGGTGGGATCACATGCTACACCCTTTGAGCGGAGGT
CGTGGGAATGGTGGCTTCTTGTCTGTGGCGACGCGAGTGTTGGCGTTATC
GGCTGTGTTGCTCGCTTTGGCCTGGACGCCTGGAAGGCTCCATGACCGAC
TGGGAGAGGGAGGGGGAGGGGGAGGGGGAGGAAGGGGAAAGGGTCTCGCT
CTCAAGATGGGTGGTGGACCCCGTAATCTCGTACGTCGGCTGTTCGGGCG
CGAGGGGCCGACGCGTCGTGGCTTGCTGGCGTCTAGGGCAGTGCGGCGCT
CCTCGGGCGACCGCAGCAAAAAGAAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAACAACCATGCCCACCTGTTCGACCCCGGTTAGGAGATCCTTCACA
ATTAAATTGCGTGGAAGGGTGCATGCGTGCGTTGGACAAGCATGTACGGG
CAGAGGATGCCCCCAGGGTATTCGCGGCTCTCAAGTCCCTCACCAGCACG
ACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTTTGCTCCTTCACACCC
TGCCAGCCTAGCTACGATTATGGCCGTGGAGGATTGGTTGGGCGAATGGC
TGGACCGGACGGCGCCTTCGCCCCCCCTTGATCTGTTGGAGGGGGCGTTG
GATTATGCTGTGTGCCTGAGCGAGGGCGAGGGGGAGGAAGGGGGGCAAGG
CGATCGACAGGCACGCAGAGGGACGGCGATGGAGAGGTTGGTGGTGGCGA
GGACTTTTAAGGGATTGTTGGGGCCGAGGATGCGTGAAAGAGGCGGGGGA
ATGGCATTGATGCAGGCCTGTCGGTTGGCGGGGAGGTGGAGCCGTTGGAA
TCGGCAATTAAGGAGGAAGCTGTTGCACGCACCGTTACACTCAATGTGGG
CACGCCTAGCCCACATTAACGAACCTGACAGTCACATCACTTCCTCTCGC
CCTTCGTCGTTTCCAATGAGGCCCAGAGGGCTGCGGAATCAGGGGAACAC
CTGTTATTTCAACTCTCTTCTTCAACAACTCTTCAACACCAAGGCGACCC
GGAAGAGCCTCCTGTTGCTGAAGGGAGGCGAGGGAGGGAGGGAGAAAGGG
GTGGTTGAGGCGTTGTCGGCGAGAGAGGAGGAAACGTGGAAGGCAGACAA
GGAGGGACAGCGGCTATGGACCGAACTGGAGGGGGTGATGGAGGGCTTGG
GGGAGGAAGGGAAGGAGGGAGGGCGGGGGGTGGACACGCGGGCACTGGTA
CAGGCGTTGGCGGTGGCCTTGCCGGAGTGGGGGGATGAAGTGTGGGAGCA
AAACGACTCGACGGAGGTCTTGATGTTTCTGCTGGAGAGGCTGGGAGGAG
GGGTGGGAGGGAGGGCTCTGGCGAGCTGCTTTCGGGGAAGGTTGCAAGAT
CGCATCTATCAGGAGGGATGTGGGCATGAGAGAGTGAAAACTCAGGCGTT
CATTACCCTACCCGTGCCAGTGAGGGAGGGCGGGGTAGAGGGAGGGCTGG
TGGAGGCGTTAAGGGAGTGGACGCGAGGGGGGGAGATGGGGGGAGGGAGG
AAGGGAGGGAAGGCGTGTGCGGTTTGTGAGGTCGTGAGTGGGGTGTGGCA
TGAGGAGACCCTGGTGGAGCTGCCCCCAGTGGTGGCGTGTCAGTTACAGA
GGTTTGAATTTGCCGTTGATGCACGGACGGGGGTGAGTAGGAGTGAGAAA
GTTGGGGGGAGGTTTCCGTTTCCGATGGTGCTGGACATGTGGCCTTACAC
GAGAGAAGGAAAGGCGAGGAGCCAGAAGGACCCGCAGGGGGTGGGGGAAG
GAGAGAGGGAGGGCGGGGAGGAGGATGTGGTGCCGCGGGCGTGGTACCGG
CTTGTGGGGGTGTTGATGCACCGGGGGTCGAGTCCGCAAGAAGGACACTA
TTACAGTTATGTGAGGAGGGAGGGAGGGAGGGAGGAAGGAGGAGGCTGGT
GGTGTGTGAATGATGAGGTGGTTACGGCGTTCGACCCCGCGAAGGAGGCG
GAGAAAGTGTGGTTTGTGGGAGGGTATGATTGTCCGTTCATGTTGCTCTA
CGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAAGGGACGG
GAGTGAGGGGAGGGTTCGGCGGAGGCAGCCTCCTCCCCGCTCCTGTGCAC
TCAGACCGCCTGGGTCCCCTAATAGCACTCGTCACAGGCCTTACCTCTGC
CACGCTCTACGCCCCTCCCCTCTCCTCCCTCTCCTCCCTCCCGTCCTCAC
CCTCGGCCTCCCATGTCCTCATCCCCGACGTCCAGCGGCTCCTCGAGCTC
TTCCACTGGCTGGCCTCCTCCCCTGCTAAGATGAGGAGGGAAGGAGCGAA
GGAGCAAGGGCGGGAGGGAGGAGGGGCGATGGAAGCCGTCCTTCTGAAAG
AGATCAAGGAGAGCGCGGGGCTGCTTCGAAGATTCCTCCTTTCTCCCTCG
CGCAATGATAAGGCGAAAGAGGGTCTGGCACACTGGCTGCTGCTTCGCTT
GGGGACGGAAGGCGGATGGATCGATGACGTCTTCTTGAGGCCTTCCTCCC
TCCCTTCCTCGTCCTCCTCCACGCCGTTGCAGCAGGGTTTGGTGGAGCTA
TGGATGGGGGTGGCGGAAGCGGCGCTTGATCGTGTGACGTCACAATCGCC
TTCTTCTCCTCAGGTGGAGGAAGCGGTTCAGAGCTTGGGAGCGGTGCTCT
TTTCTGAGGAAGGACAGGGAGGGAGGGAGGGATGGAGGGGGGATGGGCTG
GAGGTGTTGAGGGAGAGGGTGAGGCCGTTTTTGAATGTGTTGGACGGGAA
GCTCAAGCGGGCAAGGAAGGAGGAGCAGAGGGAGGAAGAAGAGGGTATGG
AGGAGGAGGAGGGAAGAAGGAGAGCAGGAGGGGAGGGAGGGAAGAAAGAG
AGTGACGGCCAGGGTGCTGCAGATGCTGGATGA
back to top

protein sequence of NO05G05060.1

>NO05G05060.1-protein ID=NO05G05060.1-protein|Name=NO05G05060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1054bp
MGIDSGTSPPSSPLPAHSLPQSPAIIAWPGSSSKNKKAAPPVHPPSGKPS
LLSNLGRLFHRGPWLEEVEELEDEEEEEGEGWWDHMLHPLSGGRGNGGFL
SVATRVLALSAVLLALAWTPGRLHDRLGEGGGGGGGGRGKGLALKMGGGP
RNLVRRLFGREGPTRRGLLASRAVRRSSGDRSKKKQQQQQQQQQQQPCPP
VRPRLGDPSQLNCVEGCMRALDKHVRAEDAPRVFAALKSLTSTTSSSSSS
SSSSFAPSHPASLATIMAVEDWLGEWLDRTAPSPPLDLLEGALDYAVCLS
EGEGEEGGQGDRQARRGTAMERLVVARTFKGLLGPRMRERGGGMALMQAC
RLAGRWSRWNRQLRRKLLHAPLHSMWARLAHINEPDSHITSSRPSSFPMR
PRGLRNQGNTCYFNSLLQQLFNTKATRKSLLLLKGGEGGREKGVVEALSA
REEETWKADKEGQRLWTELEGVMEGLGEEGKEGGRGVDTRALVQALAVAL
PEWGDEVWEQNDSTEVLMFLLERLGGGVGGRALASCFRGRLQDRIYQEGC
GHERVKTQAFITLPVPVREGGVEGGLVEALREWTRGGEMGGGRKGGKACA
VCEVVSGVWHEETLVELPPVVACQLQRFEFAVDARTGVSRSEKVGGRFPF
PMVLDMWPYTREGKARSQKDPQGVGEGEREGGEEDVVPRAWYRLVGVLMH
RGSSPQEGHYYSYVRREGGREEGGGWWCVNDEVVTAFDPAKEAEKVWFVG
GYDCPFMLLYEKEEEEEEEEEEEQGTGVRGGFGGGSLLPAPVHSDRLGPL
IALVTGLTSATLYAPPLSSLSSLPSSPSASHVLIPDVQRLLELFHWLASS
PAKMRREGAKEQGREGGGAMEAVLLKEIKESAGLLRRFLLSPSRNDKAKE
GLAHWLLLRLGTEGGWIDDVFLRPSSLPSSSSSTPLQQGLVELWMGVAEA
ALDRVTSQSPSSPQVEEAVQSLGAVLFSEEGQGGREGWRGDGLEVLRERV
RPFLNVLDGKLKRARKEEQREEEEGMEEEEGRRRAGGEGGKKESDGQGAA
DAG*
back to top
Synonyms
Publications