NO05G04990, NO05G04990 (gene) Nannochloropsis oceanica

Overview
NameNO05G04990
Unique NameNO05G04990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4615
Alignment locationchr5:1300056..1304670 +

Link to JBrowse

Properties
Property NameValue
DescriptionRegulator of nonsense transcripts 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1300056..1304670 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
GO:0003723RNA binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR007193Up-fram_suppressor-2
IPR003890MIF4G-like_typ-3
Vocabulary: Biological Process
TermDefinition
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Homology
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_016440625.1 (PREDICTED: regulator of nonsense transcripts UPF2-like [Nicotiana tabacum] >XP_016440626.1 PREDICTED: regulator of nonsense transcripts UPF2-like [Nicotiana tabacum])

HSP 1 Score: 335.5 bits (859), Expect = 6.100e-88
Identity = 259/675 (38.37%), Postives = 371/675 (54.96%), Query Frame = 0 
Query:   52 LVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKAL-GPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            L + H    ++E  + K     G L+E+   A E+ RK  +   + +  L+E LD+  P + ED        G   S       +  L   +DDED+R FYE LPDL A +PA +LG  E ++                       + V     AEG +     + D+ D   +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+  A+  ++ LL   LP C  ++  D    +F  +L  K  +K+L+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KF++ PP +  SC K CL+ FS H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E EA+ L+  ++  +GK+  +HL A + AGLS YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY LV  ++IFDTLYL L +GHE                 T +  V   LDPP D FR ++VI LL+  GH+      R   K+ L+ FLI+FQRY+  +G +P D E D+
Sbjct:  263 LQSEHASLRQMEHENAKTLSAKGELNEENASAYEKQRKAYDQLYRGISGLAEALDMQPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKSSEQPLKAQEHSIDSASEADEAQTAAV---ETAEGAVDAGAVQEDRND---KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGAN--LDGLLQR-LPSCVSRDLIDQLTVEFC-YLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFSFLINKKDQMNIETKIRNIRFIGELCKFRMAPPGLVFSCLKACLDEFSHHNIDVACNLLETCGRFLYRSPETAIRMANMLEILMRLKNVKNLDPRHITLVENAYYLCKPPERSARVSK---VRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW----------------------SECEAYLLKCFMKVHRGKYGQIHLIASLTAGLSCYHDDFAVAVVDEVLEEIRVGLELNDFGMQQR----RIAHMRFLGELYNYKLVDSSVIFDTLYLILVFGHE-----------------TSEQDV---LDPPEDCFRIRMVITLLETCGHYF----DRGSSKRKLDRFLIHFQRYILNKGVLPLDIEFDL 874
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_022744755.1 (regulator of nonsense transcripts UPF2-like isoform X1 [Durio zibethinus] >XP_022744756.1 regulator of nonsense transcripts UPF2-like isoform X1 [Durio zibethinus] >XP_022744757.1 regulator of nonsense transcripts UPF2-like isoform X1 [Durio zibethinus])

HSP 1 Score: 335.5 bits (859), Expect = 6.100e-88
Identity = 266/711 (37.41%), Postives = 381/711 (53.59%), Query Frame = 0 
Query:   20 IPSPFLADLLPSQMQEELRSLALKAFESLSTQLV-AVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEME-GAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEE--AXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKIN-HLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            I   F   L  +  Q++    +  A+   +T+L+ + H    ++E  + K     G L+E+     E+ RK  +   +N+ +L+E LD+  P + ED        G    S   G   +     +DDED+R FYE LPDL A +PA +LG  E +                             VE +V  G L              +EG   GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         N   L + LP C  ++  D  A +F  +L  K  +KRL+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KFK+ P  +  SC K CL+ F+ H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E E++ L+  ++  KGK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY  V  ++IF+TLYL L +GH+  + L          +  HD      LDPP D FR ++VI LLQ  GH+      R   K+ LN FLI+FQRY+  +G +P D E D+
Sbjct:  230 IQDEFFKGLNITTDQKKAFRKSFHAYYDAATELLQSEHVSLRQMEHENAKILNAKGELNEENASLYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVSTGEDASSPATGKESSNLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKMIEQTSKAQEQPTESSIEADQSTPVAQDAVEASVDSGTL--------------QEGKSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEGTNLDALLQRLPGCVSRDLIDQLAVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQMLEDEFNFLINKKDQMNIETKIRNIRFIGELCKFKITPAGIVFSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANLLEILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISK---VRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPW----------------------SECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR----RIAHMRFLGELYNYEHVDSSVIFETLYLMLVFGHDTAQFL----------HCQHD-----VLDPPEDYFRIRMVITLLQTCGHYF----DRGSSKRKLNRFLIHFQRYILSKGALPMDIEFDL 877
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_022744762.1 (regulator of nonsense transcripts UPF2-like isoform X6 [Durio zibethinus])

HSP 1 Score: 335.5 bits (859), Expect = 6.100e-88
Identity = 266/711 (37.41%), Postives = 381/711 (53.59%), Query Frame = 0 
Query:   20 IPSPFLADLLPSQMQEELRSLALKAFESLSTQLV-AVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEME-GAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEE--AXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKIN-HLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            I   F   L  +  Q++    +  A+   +T+L+ + H    ++E  + K     G L+E+     E+ RK  +   +N+ +L+E LD+  P + ED        G    S   G   +     +DDED+R FYE LPDL A +PA +LG  E +                             VE +V  G L              +EG   GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         N   L + LP C  ++  D  A +F  +L  K  +KRL+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KFK+ P  +  SC K CL+ F+ H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E E++ L+  ++  KGK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY  V  ++IF+TLYL L +GH+  + L          +  HD      LDPP D FR ++VI LLQ  GH+      R   K+ LN FLI+FQRY+  +G +P D E D+
Sbjct:   71 IQDEFFKGLNITTDQKKAFRKSFHAYYDAATELLQSEHVSLRQMEHENAKILNAKGELNEENASLYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVSTGEDASSPATGKESSNLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKMIEQTSKAQEQPTESSIEADQSTPVAQDAVEASVDSGTL--------------QEGKSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEGTNLDALLQRLPGCVSRDLIDQLAVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQMLEDEFNFLINKKDQMNIETKIRNIRFIGELCKFKITPAGIVFSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANLLEILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISK---VRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPW----------------------SECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR----RIAHMRFLGELYNYEHVDSSVIFETLYLMLVFGHDTAQFL----------HCQHD-----VLDPPEDYFRIRMVITLLQTCGHYF----DRGSSKRKLNRFLIHFQRYILSKGALPMDIEFDL 718
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_022744760.1 (regulator of nonsense transcripts UPF2-like isoform X4 [Durio zibethinus])

HSP 1 Score: 335.5 bits (859), Expect = 6.100e-88
Identity = 266/711 (37.41%), Postives = 381/711 (53.59%), Query Frame = 0 
Query:   20 IPSPFLADLLPSQMQEELRSLALKAFESLSTQLV-AVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEME-GAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEE--AXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKIN-HLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            I   F   L  +  Q++    +  A+   +T+L+ + H    ++E  + K     G L+E+     E+ RK  +   +N+ +L+E LD+  P + ED        G    S   G   +     +DDED+R FYE LPDL A +PA +LG  E +                             VE +V  G L              +EG   GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         N   L + LP C  ++  D  A +F  +L  K  +KRL+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KFK+ P  +  SC K CL+ F+ H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E E++ L+  ++  KGK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY  V  ++IF+TLYL L +GH+  + L          +  HD      LDPP D FR ++VI LLQ  GH+      R   K+ LN FLI+FQRY+  +G +P D E D+
Sbjct:  120 IQDEFFKGLNITTDQKKAFRKSFHAYYDAATELLQSEHVSLRQMEHENAKILNAKGELNEENASLYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVSTGEDASSPATGKESSNLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKMIEQTSKAQEQPTESSIEADQSTPVAQDAVEASVDSGTL--------------QEGKSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEGTNLDALLQRLPGCVSRDLIDQLAVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQMLEDEFNFLINKKDQMNIETKIRNIRFIGELCKFKITPAGIVFSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANLLEILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISK---VRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPW----------------------SECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR----RIAHMRFLGELYNYEHVDSSVIFETLYLMLVFGHDTAQFL----------HCQHD-----VLDPPEDYFRIRMVITLLQTCGHYF----DRGSSKRKLNRFLIHFQRYILSKGALPMDIEFDL 767
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_022744759.1 (regulator of nonsense transcripts UPF2-like isoform X3 [Durio zibethinus])

HSP 1 Score: 335.5 bits (859), Expect = 6.100e-88
Identity = 266/711 (37.41%), Postives = 381/711 (53.59%), Query Frame = 0 
Query:   20 IPSPFLADLLPSQMQEELRSLALKAFESLSTQLV-AVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEME-GAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEE--AXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKIN-HLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            I   F   L  +  Q++    +  A+   +T+L+ + H    ++E  + K     G L+E+     E+ RK  +   +N+ +L+E LD+  P + ED        G    S   G   +     +DDED+R FYE LPDL A +PA +LG  E +                             VE +V  G L              +EG   GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         N   L + LP C  ++  D  A +F  +L  K  +KRL+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KFK+ P  +  SC K CL+ F+ H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E E++ L+  ++  KGK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY  V  ++IF+TLYL L +GH+  + L          +  HD      LDPP D FR ++VI LLQ  GH+      R   K+ LN FLI+FQRY+  +G +P D E D+
Sbjct:  201 IQDEFFKGLNITTDQKKAFRKSFHAYYDAATELLQSEHVSLRQMEHENAKILNAKGELNEENASLYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVSTGEDASSPATGKESSNLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKMIEQTSKAQEQPTESSIEADQSTPVAQDAVEASVDSGTL--------------QEGKSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEGTNLDALLQRLPGCVSRDLIDQLAVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQMLEDEFNFLINKKDQMNIETKIRNIRFIGELCKFKITPAGIVFSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANLLEILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISK---VRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPW----------------------SECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR----RIAHMRFLGELYNYEHVDSSVIFETLYLMLVFGHDTAQFL----------HCQHD-----VLDPPEDYFRIRMVITLLQTCGHYF----DRGSSKRKLNRFLIHFQRYILSKGALPMDIEFDL 848
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_022744761.1 (regulator of nonsense transcripts UPF2-like isoform X5 [Durio zibethinus])

HSP 1 Score: 335.5 bits (859), Expect = 6.100e-88
Identity = 266/711 (37.41%), Postives = 381/711 (53.59%), Query Frame = 0 
Query:   20 IPSPFLADLLPSQMQEELRSLALKAFESLSTQLV-AVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEME-GAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEE--AXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKIN-HLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            I   F   L  +  Q++    +  A+   +T+L+ + H    ++E  + K     G L+E+     E+ RK  +   +N+ +L+E LD+  P + ED        G    S   G   +     +DDED+R FYE LPDL A +PA +LG  E +                             VE +V  G L              +EG   GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         N   L + LP C  ++  D  A +F  +L  K  +KRL+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KFK+ P  +  SC K CL+ F+ H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E E++ L+  ++  KGK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY  V  ++IF+TLYL L +GH+  + L          +  HD      LDPP D FR ++VI LLQ  GH+      R   K+ LN FLI+FQRY+  +G +P D E D+
Sbjct:   91 IQDEFFKGLNITTDQKKAFRKSFHAYYDAATELLQSEHVSLRQMEHENAKILNAKGELNEENASLYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVSTGEDASSPATGKESSNLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKMIEQTSKAQEQPTESSIEADQSTPVAQDAVEASVDSGTL--------------QEGKSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEGTNLDALLQRLPGCVSRDLIDQLAVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQMLEDEFNFLINKKDQMNIETKIRNIRFIGELCKFKITPAGIVFSCLKTCLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANLLEILMRLKNVKNLDPRQSTLVENAYYLCKPPERSARISK---VRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPW----------------------SECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR----RIAHMRFLGELYNYEHVDSSVIFETLYLMLVFGHDTAQFL----------HCQHD-----VLDPPEDYFRIRMVITLLQTCGHYF----DRGSSKRKLNRFLIHFQRYILSKGALPMDIEFDL 738
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: PIA46598.1 (hypothetical protein AQUCO_01500258v1 [Aquilegia coerulea])

HSP 1 Score: 335.1 bits (858), Expect = 7.900e-88
Identity = 274/697 (39.31%), Postives = 392/697 (56.24%), Query Frame = 0 
Query:   29 LPSQMQEELRSLALKAFESLSTQLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKALGP-YDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAGGRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            + +  ++ LR      +++ +  L + H    +LE  + K     G LSE+   + E+ RK  +   + + +L+E LDL  P + +D        G   S       + AL P +DDED+R FYE LPDL A +PA +LG +E ++ XXXXXXXXXXXXXXXXXXXXXX        +E               +  EG  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GL   +  ++ LL   LP C  ++  D    +F  +L  K  +KRL+  LF+VP  +L+LL  YSR+VATLS  + D+   L++ L+ EF Y + K+   +++ K++ +++IGEL KFK+ PP +  +C K CL+ F+ H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+       PPLH YIR LLF  L   +++ V+R LRKLPW                       E EA+ ++  ++  +GK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE      ++    H+     LGELYNY  +  ++IF+TLYL L++GH  P                        LDPP D FR ++V+ LLQ  GH+      R   K+ L+ FLIYFQR +  +G VP D E D+
Sbjct:  236 ITADQKKSLRKAFFTYYDAAAELLQSEHTALRQLEHENAKILNAKGELSEENANSYEKLRKSYDQLFRGVTSLAEALDLQPPVMPDDGHTTRVTTGEDASSPATGKESSALEPIWDDEDTRAFYECLPDLRAFVPAVLLGESEAKSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSE---------------VSHEGKADEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLEGTN--LDALLQR-LPGCVSRDLIDQLTVEFC-YLNSKSNRKRLVRALFNVPRTSLELLAYYSRMVATLSTCMKDISSMLLQNLEEEFNYLINKKDQMNIETKIRNIRFIGELCKFKIAPPGLVFTCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSK---TRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPW----------------------SECEAYLVKCFMKVHRGKYSQVHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYTMQQRRIAHMR---FLGELYNYEHIDSSVIFETLYLILSFGHGTPEQ--------------------DVLDPPEDCFRIRMVVTLLQTCGHYF----DRGSSKRKLDRFLIYFQRSILSKGSVPLDIEFDL 861
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: PIA46596.1 (hypothetical protein AQUCO_01500258v1 [Aquilegia coerulea])

HSP 1 Score: 335.1 bits (858), Expect = 7.900e-88
Identity = 274/697 (39.31%), Postives = 392/697 (56.24%), Query Frame = 0 
Query:   29 LPSQMQEELRSLALKAFESLSTQLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKALGP-YDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAGGRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            + +  ++ LR      +++ +  L + H    +LE  + K     G LSE+   + E+ RK  +   + + +L+E LDL  P + +D        G   S       + AL P +DDED+R FYE LPDL A +PA +LG +E ++ XXXXXXXXXXXXXXXXXXXXXX        +E               +  EG  +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GL   +  ++ LL   LP C  ++  D    +F  +L  K  +KRL+  LF+VP  +L+LL  YSR+VATLS  + D+   L++ L+ EF Y + K+   +++ K++ +++IGEL KFK+ PP +  +C K CL+ F+ H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+       PPLH YIR LLF  L   +++ V+R LRKLPW                       E EA+ ++  ++  +GK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE      ++    H+     LGELYNY  +  ++IF+TLYL L++GH  P                        LDPP D FR ++V+ LLQ  GH+      R   K+ L+ FLIYFQR +  +G VP D E D+
Sbjct:  203 ITADQKKSLRKAFFTYYDAAAELLQSEHTALRQLEHENAKILNAKGELSEENANSYEKLRKSYDQLFRGVTSLAEALDLQPPVMPDDGHTTRVTTGEDASSPATGKESSALEPIWDDEDTRAFYECLPDLRAFVPAVLLGESEAKSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSE---------------VSHEGKADEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLEGTN--LDALLQR-LPGCVSRDLIDQLTVEFC-YLNSKSNRKRLVRALFNVPRTSLELLAYYSRMVATLSTCMKDISSMLLQNLEEEFNYLINKKDQMNIETKIRNIRFIGELCKFKIAPPGLVFTCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSK---TRPPLHQYIRKLLFTDLDKSSIEHVLRQLRKLPW----------------------SECEAYLVKCFMKVHRGKYSQVHLIASLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYTMQQRRIAHMR---FLGELYNYEHIDSSVIFETLYLILSFGHGTPEQ--------------------DVLDPPEDCFRIRMVVTLLQTCGHYF----DRGSSKRKLDRFLIYFQRSILSKGSVPLDIEFDL 828
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_009778348.1 (PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana sylvestris] >XP_009778349.1 PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana sylvestris] >XP_016515866.1 PREDICTED: regulator of nonsense transcripts UPF2-like [Nicotiana tabacum] >XP_016515867.1 PREDICTED: regulator of nonsense transcripts UPF2-like [Nicotiana tabacum] >XP_016515869.1 PREDICTED: regulator of nonsense transcripts UPF2-like [Nicotiana tabacum])

HSP 1 Score: 334.7 bits (857), Expect = 1.000e-87
Identity = 259/683 (37.92%), Postives = 372/683 (54.47%), Query Frame = 0 
Query:   52 LVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKAL-GPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVE--------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            L + H    ++E  + K     G L+E+   A E+ RK  +   + +  L+E LD+  P + ED        G   S       +  L   +DDED+R FYE LPDL A +PA +LG  E ++                       + V     AEG              +V+ G V+         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+  A+  ++ LL   LP C  ++  D    +F  +L  K  +K+L+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KF++ PP +  SC K CL+ FS H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E EA+ L+  ++  +GK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY LV  ++IFDTLYL L +GHE                 T +  V   LDPP D FR ++V+ LL+  GH+      R   K+ L+ FLI+FQRY+  +G +P D E D+
Sbjct:  263 LQSEHASLRQMEHENAKTLSAKGELNEENAFAYEKQRKAYDQLYRGISGLAEALDMQPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKSSEQPLKAQEHSIDSASEADEAQTAAV---ETAEG--------------VVDAGAVQEDRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGAN--LDGLLQR-LPSCVSRDLIDQLTVEFC-YLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFSFLINKKDQMNIETKIRNIRFIGELCKFRMAPPGLVFSCLKACLDEFSHHNIDVACNLLETCGRFLYRSPETAIRMANMLEILMRLKNVKNLDPRHITLVENAYYLCKPPERSARVSK---VRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW----------------------SECEAYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRVGLELNDFGMQQR----RIAHMRFLGELYNYELVDSSVIFDTLYLILVFGHE-----------------TSEQDV---LDPPEDCFRIRMVVTLLETCGHYF----DRGSSKRKLDRFLIHFQRYILNKGVLPLDIEFDL 871
[Close]
BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_010929941.1 (PREDICTED: regulator of nonsense transcripts UPF2-like [Elaeis guineensis])

HSP 1 Score: 334.7 bits (857), Expect = 1.000e-87
Identity = 260/687 (37.85%), Postives = 370/687 (53.86%), Query Frame = 0 
Query:   45 FESLSTQLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKALGP-YDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVEL-----AVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            +++++  L + H     LE  + K     G LS++   + E+ RK  +   + + +L+E LD+  P + +D        G  +S       +  L P +DDED+R FYE LPDL A +PA +LG  E ++                          VEL      +AEG            + + E      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GL      ++ LL   LP C  ++  D    +F  +L  K  +K+L+  LF+VP  +L+LLP YSR+VATLS  + D+   L+  L+ EF + + K+  T+++ K+K +++IGEL KFK+ P  +  SC K CL+ F+ H+++VAC LLE+CGRFL+ +P T   + + L++MM+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   TV+ V+R LRKLPW                       E E + L+  L+  KGK++ +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     LA    LGELYNY  +  ++IF+TLYL + +GH  P                        LDPP D FR +++I LLQ  GH+      R   K+ L+ FLIYFQRY+  +G +P D E D+
Sbjct:  266 YDAVAELLQSEHNSLRMLELENAKILNAKGELSDENTTSYEKLRKSYDHLFRGVSSLAEALDMQPPVMPDDGHTTRLTTGVDVSSSASGKESSVLEPVWDDEDTRAFYESLPDLRAFVPAVLLGEAEPKS-----------NEQHPKTAERQSESAVELDMEVQDIAEG--------CGDSEPLPEGKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLDGT--SLDGLLQR-LPGCVSRDLIDQLTVEFC-YLNSKANRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVPTMLLSMLEEEFNFLINKKDQTNIETKIKNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEIMMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSK---VRPPLHQYIRKLLFSDLDKSTVEHVLRQLRKLPW----------------------AECEPYILKCFLKVHKGKYNHVHLIALLTAGLSRYHDEFAVAVVDEVLEEIRLGLELNDYGMQQR----RLAHMRFLGELYNYEHIDSSVIFETLYLIIIFGHGTPEQ--------------------DVLDPPEDCFRIRMIITLLQTCGHYF----DRGSSKRKLDRFLIYFQRYVLSKGPIPLDIEFDI 876
The following BLAST results are available for this feature:
BLAST of NO05G04990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_016440625.16.100e-8838.37PREDICTED: regulator of nonsense transcripts UPF2-... [more]
XP_022744755.16.100e-8837.41regulator of nonsense transcripts UPF2-like isofor... [more]
XP_022744762.16.100e-8837.41regulator of nonsense transcripts UPF2-like isofor... [more]
XP_022744760.16.100e-8837.41regulator of nonsense transcripts UPF2-like isofor... [more]
XP_022744759.16.100e-8837.41regulator of nonsense transcripts UPF2-like isofor... [more]
XP_022744761.16.100e-8837.41regulator of nonsense transcripts UPF2-like isofor... [more]
PIA46598.17.900e-8839.31hypothetical protein AQUCO_01500258v1 [Aquilegia c... [more]
PIA46596.17.900e-8839.31hypothetical protein AQUCO_01500258v1 [Aquilegia c... [more]
XP_009778348.11.000e-8737.92PREDICTED: regulator of nonsense transcripts UPF2 ... [more]
XP_010929941.11.000e-8737.85PREDICTED: regulator of nonsense transcripts UPF2-... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04990.1NO05G04990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04990.1NO05G04990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04990 ID=NO05G04990|Name=NO05G04990|organism=Nannochloropsis oceanica|type=gene|length=4615bp
ATGGTGCCACGCAAGACTAAGgtaaaggagggagggagggagggagggag
ggagggagggagagagggagcgaagagaggatttgagcaggctgtgagtt
ttactacatcactcaccctccctccctccctccctccctccctcccgccc
tccttctgtcagGCCCTCCACCTCACGGCCAAGTCAGCCACGGCCCCGAT
ACCCTCCCCCTTCCTCGCCGACCTCCTCCCTTCCCAGATGCAGGAAGAAC
TACGCTCCTTGGCATTAAAGGCGTTTGAGTCCCTCAGCACACAGCTCGTC
GCTGTGCATAAGgtagggatggatggagggatggagggtgggggggaggg
agcgagggaaggaagacccagtcgcgatggtattttactttgacgtttcc
ctaacctcccctccctccctccctccctccctcccgtagCACAAGACGGA
GCTCGAGCGGCGGTCGGAGAAGGACACCCTGCTGTATGGTGCACTGAGTG
AGGATAAGGAGCTGGCCCTGGAGGAGGCGCGAAAAGGATGCGAGTCCTTC
GTGAAAAACATGCAGgtacggaagagaggcaggacgggagaaggggaggg
agggaggaaaattggaaatggtgcgtggttactgatgaaaaacgccccct
cgatgcacacagGCGCTGTCAGAGGGGTTGGACTTACCCCTTCCACACCT
GCAGGAGGATGAAGGCGAGATGGAGGGCGCTGGTGGCGGCGgtacgtgcc
tttaccttccctccctcgctttgtttcctcccttccctcacccaacccca
ccctccctccctccctcccgtccatccccacagGCCTCTCTCTCTGGGAT
GGCGACATGGGCGCCAAGGCGCTCGGCCCATACGACGACGAAGACAGCAG
GCTCTTCTACGAGGACCTGCCCGATCTTCTCGCCACCCTACCTGCGgtgc
gtcccgccctccttccatcctccctccctccctccctccctcctcccttt
atcctcaccatttcctctcaccttctttgccccctcagGCGATGCTGGGG
CTGACGGAGGAAGAGGCTGCAAAACTCCGACAAGACAAGGAGGCCAAAGT
CCAGCAGCAACAGCAGCAGgcaagccctcctcccctccctccctccctcc
ctccctccctccctcctccttttcctcttttttttttttctgacccactc
acgaacacctttcactattcttctttgatttccctccctcccgccctccc
tccctccctccctctgacgcatcctcagGAGGAGGAGGCCGCTCTATCGG
GCGTGGTGGAGCTGGCCGTGGCGGAGGGTGGGCTTGGAAAACCCAACCGC
CGCGTGGATCAGATGGACGTTATTGTCGAAGAGGGTGGAGTGGAGGGAGA
GGGGGAGGAAGAGGAAGAGGAAGAGGAGGAGGGGGACGATAATGACGAGG
ACCGGCCTCGGTTGAAAGAGGAGGGGGAGGGAGGGGAGGAGGAAGGGGAG
GAGGAGGGGTTGACGTCGGCACACCATAAAATCAACCACTTATTGCACGA
GGTGCTGCCGTTATGTTATCATCAAGAGAGGAGCGATGACTTTGCGTGGC
AATTCGCGCCATTTTTGAGGCACAAGCGGATCCAGAAGgtgagggaggga
gggaggaagtcgcggtaggaggcaaactggaaccactttcccctccctcc
ctccctccctccctccctccttgccatggcacctcttgacacccctccct
cttctccgttgccagccgcatcgtctcaccccttcccttcctcccccctc
gctcccccagCGCCTCCTCGCCATCCTCTTTTCCGTGCCGTGGCAAAACC
TAGACCTTCTCCCTCAGTACAGCCGGATCGTCGCCACCCTCTCGCCCGTC
CTTCCTGACCTGGGCCCCTCCCTCGTCAGGGAGCTACAGAGGGAATTTCG
TTATTTTATGACGAAACGCCCGAACACCCACCTGGACATGAAGgtgagga
caaggagggagggagggagggagggagggagagcgtgaaggaaggggagg
gtgctgctatctccgagccttttcaccgtccacaatcatattcccaccct
tcctgcctccttccctccctccctctctccctcagCTCAAAACCGTGAAG
TATATCGGGGAGCTCGTGAAGTTTAAGGTCTGTCCGCCTATTGTGCCTTT
GAGCTGCACTAAAGTGTGTTTGGAGGCCTTCTCGCGACATCACGTCGAGg
tgagtcgcatgcgttccctccctccctccctccctcccatcctccctccc
tcccgccctttcatccagccttctcttctcggtcctcgtcacgcatccat
ccctcttccccccccccaccctccccccctccctcctccttctcaccctc
agGTCGCATGCGGGCTGCTGGAGAGCTGTGGCCGGTTCCTTTTCCTCACC
CCTCACACCCACCCCCACCTCAAGCACTACCTGGATGTGATGATGAAGCT
GAAGCGCGCAAAGAATGTGGACCCAAACCTCGAGgtaagagtccccctcc
ctccccctctccctatccgcttccttttccttggtgacacccacttctct
tcctctctcccccccttcctccctccctccctccctccctccctccctcc
ctccctccatcagGTTCTTATCAACAACGCCTACCTCATCTGCAACCCTC
CCTCGGACCGTCGGCGCCTCCACAATGACCTCGTCCTCCTTCCCCCCCTC
CATGCCTACATCCGCTCGCTCCTCTTCCAGCGACTGACGGCCAAGACCGT
CGATGACGTTATTCGCCTCCTTCGGAAACTGCCCTGGAAAGCCAAGGGCG
GGACGGAGGAAGGGATTGCTGCGGCTGCGGGTGGCGAGGGAGGGAAGGAG
GGGGGGGAGCTGGAGGCTTTTTTCCTGCGTGCGGTTTTGCAGGGTGCAAA
GGGGAAGTTCCACGCACTGCACCTCTTCGCGGATGTGCTGGCAGGATTAA
GTAAATACCACGAAGCCATGTGCGTGCGCCTGGTCGACGAGTTGCTGGAG
GAGTTAAAGAGGGGCTTGGAGACAGCGGGGGGGAGGAGGGAGAGGGATAC
GCAGGGCCACCTCGCCCTCAGTGGGCTTCTCGGTGAGCTGTACAATTACA
GCTTAGTGCCGCATGCCTTGATCTTCGACACCCTCTACCTCTTCCTCAAC
TACGGCCACGAGGTGCCCCGCCCCCTCCCTTCCTCCCTCCCTCCCTCCTT
CCCCCCCTACGTCACGCATGATCCCCGGGTGCTAACCCCTCTCGACCCTC
CTGGCGACACTTTCCGCACTCAACTCGTGATCGTTCTCCTGCAGGCCACA
GGACACTTCTTGGCCTCCTCCACGGGAAGGATAAAGATGAAGAAAAGCTT
GAATACGTTTCTGATCTATTTCCAACGCTACCTTTTTTGTCGTGGGTACG
TTCCTCCTGACACGGAGAATGACGTGCTGGATTTACTGGATCTTTTGGAG
GGGCTAGGGGGGGAGGGAGGGGGGGAGAGCGTGCCACGGTATGCGACATG
GGAAGAGGCGCAGGCGGAGgtggataggatggagagggaggagtgggaga
ggaaggggggggaagggagggagagggggggaaggaggggaggaaggtgg
ggggggatgttgcgcagggaggacagAAGGAGGGAGAGGATGACGAGAGC
ATAAGTAGCGATGGGAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAG
CAGTGGGAGTGACAGTGACAGTGATGAGGAGGGGCAGGAGACAGAACCTC
CTGAGGATGAAGAGGACGAGGAGGAGGACGAGGAGGAGGACGAGGAGGAG
GAAGAGGCCGTGGCGGTTCATCGGCGGATGCCTCAGAAGACTGAAGAAGA
CATGGAGATGGAGGCAGAATTTGAAAAAGCGTTTGCAGGTATGGTGATGC
ACAGCATGGAGGAACGGAAAACAAGCGCTCGGGCAGGGGCCACGAGCCTG
GCAGCTGACAATATGATTCTACCGTCAACCCTCCCGAAGGTATCGAGGCG
AGGAGGAAGGGGAGGAGAAGGGGAGGAAGAGGAAGAAGAGGGGACGGAGA
GAGGTGGGGGATGGGGCGCTAAGTCGGGAGCAGGAGGGGGTGAAGGGGGG
GGAGGAGGGGGAGGAGGGGTGACGTTTCGAATGTTGAAGAGGGGAAACCG
AGGCCGTTTAGAAGCGAGGGAGTTAATGGTCCCTGACTACACTTCCTTGG
CTACCACCATCCGGACACATCGGGATGCCGAGAAGGAAGAGCATGACAGG
CTGAAGCAGCGCGTGCTGCAGTATGAGACGATGGTGGAGGAGGGGGAGGG
AGGGGACGAGGGGTGGATGGGTGCAGAAAGCGTGGATCTTGAGAAAGTTC
ATAACAGGCCGTTAACGGAAGGGGAAAAGGCGAGGCTCACAGCACTGGCA
GCTCGACGCCGGGAGCAGCGGTCGAGACGAGGAAGGGGGGGAGGAGTAGG
ATCAGGGGCAGGGGGTGGAGGGAGTACCGGCGGAGGAGCCGGGGGAGGAC
GAGGCAGTGCACAACCGCCCTTGCAGTTTTATGAACGAGGGTTTTTTAAC
CGAAGCTCTTCATAA
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protein sequence of NO05G04990.1

>NO05G04990.1-protein ID=NO05G04990.1-protein|Name=NO05G04990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1068bp
MVPRKTKALHLTAKSATAPIPSPFLADLLPSQMQEELRSLALKAFESLST
QLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQA
LSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKALGPYDDEDSRLF
YEDLPDLLATLPAAMLGLTEEEAAKLRQDKEAKVQQQQQQEEEAALSGVV
ELAVAEGGLGKPNRRVDQMDVIVEEGGVEGEGEEEEEEEEEGDDNDEDRP
RLKEEGEGGEEEGEEEGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFA
PFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVR
ELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCL
EAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDP
NLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVD
DVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKG
KFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAGGRRERDTQ
GHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLPSSLPPSFP
PYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLN
TFLIYFQRYLFCRGYVPPDTENDVLDLLDLLEGLGGEGGGESVPRYATWE
EAQAEKEGEDDESISSDGSSSSSSSSSSSSSGSDSDSDEEGQETEPPEDE
EDEEEDEEEDEEEEEAVAVHRRMPQKTEEDMEMEAEFEKAFAGMVMHSME
ERKTSARAGATSLAADNMILPSTLPKVSRRGGRGGEGEEEEEEGTERGGG
WGAKSGAGGGEGGGGGGGGVTFRMLKRGNRGRLEARELMVPDYTSLATTI
RTHRDAEKEEHDRLKQRVLQYETMVEEGEGGDEGWMGAESVDLEKVHNRP
LTEGEKARLTALAARRREQRSRRGRGGGVGSGAGGGGSTGGGAGGGRGSA
QPPLQFYERGFFNRSSS*
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