NO05G04810, NO05G04810 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G04810
Unique Name	NO05G04810
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2654
Alignment location	chr5:1247920..1250573 -

Link to JBrowse

Properties


Property Name	Value
Description	Ribosomal rna-processing protein 8

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1247920..1250573 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity
GO:0016740	transferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005730	nucleolus
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR029063	SAM-dependent_MTases
IPR007823	Methyltransferase-rel

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Homology

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: EWM27923.1 (ribosomal rna-processing protein 8 [Nannochloropsis gaditana])

HSP 1 Score: 318.2 bits (814), Expect = 5.200e-83
Identity = 181/262 (69.08%), Postives = 201/262 (76.72%), Query Frame = 0

Query:  164 SQLKSANLPANTATSFPPI--ISSPSSGRPLSALQAKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEG-----GXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVKVG 419
            S L S   P N  +S   +  +S  SSG  LSALQAKMKARLEGARFRDINEMLYTS G+HAL TFK EP LFEAYHKG+REQ  KWPRNPLDD+I WVR+QPRTH+FADFGCGEARLAASCP HTVHSFDLV P GE       E  +   V ACD+A+VPL + SVHGVIFCLSLM TNMMD ++EAVRVCV+GG +KV EVRSRFEG      XXXXXXXXXXXXX     AC+ LGL CK+L+R NKMFF +DFVKVG
Sbjct:  164 SHLVSLAHPQNHPSSEVALKRVSPSSSGPVLSALQAKMKARLEGARFRDINEMLYTSRGDHALTTFKNEPALFEAYHKGFREQVQKWPRNPLDDIIAWVRRQPRTHTFADFGCGEARLAASCPHHTVHSFDLVAPGGE-------EAGRAGTVIACDMANVPLPSESVHGVIFCLSLMATNMMDSLREAVRVCVEGGVVKVVEVRSRFEGQGEAEXXXXXXXXXXXXXXXXXXXACQALGLACKRLDRTNKMFFLVDFVKVG 418

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: XP_005854933.1 (ribosomal rna-processing, partial [Nannochloropsis gaditana CCMP526] >EKU21421.1 ribosomal rna-processing, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 262.3 bits (669), Expect = 3.400e-66
Identity = 136/194 (70.10%), Postives = 150/194 (77.32%), Query Frame = 0

Query:  164 SQLKSANLPANTATSFPPI--ISSPSSGRPLSALQAKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCV 356
            S L S   P N  +S   +  +S  SSG  LSALQAKMKARLEGARFRDINEMLYTS G+HAL TFK EP LFEAYHKG+REQ  KWPRNPLDD+I WVR+QPRTH+FADFGCGEARLAASCP HTVHSFDLV P GE       E  +   V ACD+A+VPL + SVHGVIFCLSLM TNMMD ++EAVRVCV
Sbjct:  148 SHLVSLAHPQNHPSSEVALKRVSPSSSGPVLSALQAKMKARLEGARFRDINEMLYTSRGDHALTTFKNEPALFEAYHKGFREQVQKWPRNPLDDIIAWVRRQPRTHTFADFGCGEARLAASCPHHTVHSFDLVAPGGE-------EAGRAGTVIACDMANVPLPSESVHGVIFCLSLMATNMMDSLREAVRVCV 334

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: CBJ25481.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 223.4 bits (568), Expect = 1.800e-54
Identity = 118/227 (51.98%), Postives = 152/227 (66.96%), Query Frame = 0

Query:  192 LSALQAKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEGGXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVKVG 419
            LS LQ +M+ +LEGA+FR INE LYTSE   +L  FKQEPELF+ YH+G+REQ  KWP +PLD +IDW++K P+    ADFGCGEARLAA+ P + VHSFDLV P                 VTACD+A+VP+++ASVH  +FCLSLMGTN+ D+++EA RV V GG +KVAEVRSRFEG              E F+   + LG + ++++R NKMF   +F K G
Sbjct:   51 LSELQKRMRQKLEGAQFRMINETLYTSESGVSLAKFKQEPELFDVYHRGFREQVEKWPVHPLDIIIDWLKKYPKAR-VADFGCGEARLAATVP-NKVHSFDLVSP--------------NPLVTACDMANVPIKDASVHVAVFCLSLMGTNLADFLREAHRVLVPGGLVKVAEVRSRFEG---------EEGGVERFLEVTRRLGFDTRQMDRSNKMFLLAEFKKSG 252

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: CCI42634.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 198.4 bits (503), Expect = 6.000e-47
Identity = 105/225 (46.67%), Postives = 141/225 (62.67%), Query Frame = 0

Query:  192 LSALQAKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEGGXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVK 417
            LS LQ  M+ RL+G+RFR +NE LYT  G+ A  TF+ +PELF+ YH+G+REQ  KWP NPLD  ID+++K P     ADFGCGEARLA S P + VHSFDLV P                 V AC+IAHVPL + S+   I+CL+LMGT + +Y++EA RV   GG +K+AEV+SRFE               +GF++  + LG + ++ + +NKMF  L+F K
Sbjct:   56 LSKLQQAMRKRLDGSRFRMLNEELYTKTGDDAFQTFQDDPELFDIYHQGFREQVTKWPINPLDIFIDYIKKHPNA-VVADFGCGEARLAQSVP-NRVHSFDLVAPNDH--------------VVACNIAHVPLNSKSIDIAIYCLALMGTTIPEYLREAHRVMKAGGILKIAEVKSRFE--------TKQLGGIQGFISQLRKLGFDYQEKDERNKMFVLLEFQK 256

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: ETI57395.1 (hypothetical protein F443_00310 [Phytophthora parasitica P1569] >ETM03546.1 hypothetical protein L917_00254 [Phytophthora parasitica])

HSP 1 Score: 197.6 bits (501), Expect = 1.000e-46
Identity = 101/220 (45.91%), Postives = 143/220 (65.00%), Query Frame = 0

Query:  197 AKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEGGXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVK 417
            A+M+ +++G +FR +NE LYT+ G+ A +TF+ +PELF+ YH+G+RE A KWP NPLD  ID+V++ P+    ADFGCG+ARLA S P + VHSFDLV               ++  VTAC+IA VPL+++SV   ++CL+LMGT++ +YV+E  RV   GG +KVAEV+SRFE               EGFV   + +G +CK  + +NKMF   +FVK
Sbjct:   62 AEMRRKIDGGKFRMLNEQLYTTTGDDAFSTFQDDPELFDVYHQGFREMADKWPTNPLDTFIDFVKRHPKA-VVADFGCGDARLAESVP-NKVHSFDLV--------------SRKPIVTACNIADVPLKDSSVDIGVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFES--------ESLGGIEGFVQTLRKMGFDCKHKDERNKMFVLFEFVK 257

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: ETK97154.1 (hypothetical protein L915_00272 [Phytophthora parasitica] >ETL50507.1 hypothetical protein L916_00270 [Phytophthora parasitica] >ETP27176.1 hypothetical protein F441_00288 [Phytophthora parasitica CJ01A1] >ETP55131.1 hypothetical protein F442_00294 [Phytophthora parasitica P10297])

HSP 1 Score: 197.6 bits (501), Expect = 1.000e-46
Identity = 101/220 (45.91%), Postives = 143/220 (65.00%), Query Frame = 0

Query:  197 AKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEGGXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVK 417
            A+M+ +++G +FR +NE LYT+ G+ A +TF+ +PELF+ YH+G+RE A KWP NPLD  ID+V++ P+    ADFGCG+ARLA S P + VHSFDLV               ++  VTAC+IA VPL+++SV   ++CL+LMGT++ +YV+E  RV   GG +KVAEV+SRFE               EGFV   + +G +CK  + +NKMF   +FVK
Sbjct:   62 AEMRRKIDGGKFRMLNEQLYTTTGDDAFSTFQDDPELFDVYHQGFREMADKWPTNPLDTFIDFVKRHPKA-VVADFGCGDARLAESVP-NKVHSFDLV--------------SRKPIVTACNIADVPLKDSSVDIGVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFES--------ESLGGIEGFVQTLRKMGFDCKHKDERNKMFVLFEFVK 257

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: ETM56816.1 (hypothetical protein L914_00277 [Phytophthora parasitica])

HSP 1 Score: 197.6 bits (501), Expect = 1.000e-46
Identity = 101/220 (45.91%), Postives = 143/220 (65.00%), Query Frame = 0

Query:  197 AKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEGGXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVK 417
            A+M+ +++G +FR +NE LYT+ G+ A +TF+ +PELF+ YH+G+RE A KWP NPLD  ID+V++ P+    ADFGCG+ARLA S P + VHSFDLV               ++  VTAC+IA VPL+++SV   ++CL+LMGT++ +YV+E  RV   GG +KVAEV+SRFE               EGFV   + +G +CK  + +NKMF   +FVK
Sbjct:   62 AEMRRKIDGGKFRMLNEQLYTTTGDDAFSTFQDDPELFDVYHQGFREMADKWPTNPLDTFIDFVKRHPKA-VVADFGCGDARLAESVP-NKVHSFDLV--------------SRKPIVTACNIADVPLKDSSVDIGVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFES--------ESLGGIEGFVQTLRKMGFDCKHKDERNKMFVLFEFVK 257

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: XP_008889863.1 (hypothetical protein PPTG_00237 [Phytophthora parasitica INRA-310] >ETN23699.1 hypothetical protein PPTG_00237 [Phytophthora parasitica INRA-310])

HSP 1 Score: 197.6 bits (501), Expect = 1.000e-46
Identity = 101/220 (45.91%), Postives = 143/220 (65.00%), Query Frame = 0

Query:  197 AKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEGGXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVK 417
            A+M+ +++G +FR +NE LYT+ G+ A +TF+ +PELF+ YH+G+RE A KWP NPLD  ID+V++ P+    ADFGCG+ARLA S P + VHSFDLV               ++  VTAC+IA VPL+++SV   ++CL+LMGT++ +YV+E  RV   GG +KVAEV+SRFE               EGFV   + +G +CK  + +NKMF   +FVK
Sbjct:   62 AEMRRKIDGGKFRMLNEQLYTTTGDDAFSTFQDDPELFDVYHQGFREMADKWPTNPLDTFIDFVKRHPKA-VVADFGCGDARLAESVP-NKVHSFDLV--------------SRKPIVTACNIADVPLKDSSVDIGVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFES--------ESLGGIEGFVQTLRKMGFDCKHKDERNKMFVLFEFVK 257

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: ETO86140.1 (hypothetical protein F444_00292 [Phytophthora parasitica P1976])

HSP 1 Score: 197.6 bits (501), Expect = 1.000e-46
Identity = 101/220 (45.91%), Postives = 143/220 (65.00%), Query Frame = 0

Query:  197 AKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEGGXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVK 417
            A+M+ +++G +FR +NE LYT+ G+ A +TF+ +PELF+ YH+G+RE A KWP NPLD  ID+V++ P+    ADFGCG+ARLA S P + VHSFDLV               ++  VTAC+IA VPL+++SV   ++CL+LMGT++ +YV+E  RV   GG +KVAEV+SRFE               EGFV   + +G +CK  + +NKMF   +FVK
Sbjct:   62 AEMRRKIDGGKFRMLNEQLYTTTGDDAFSTFQDDPELFDVYHQGFREMADKWPTNPLDTFIDFVKRHPKA-VVADFGCGDARLAESVP-NKVHSFDLV--------------SRKSIVTACNIADVPLKDSSVDIGVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFES--------ESLGGIEGFVQTLRKMGFDCKHKDERNKMFVLFEFVK 257

[Close]

BLAST of NO05G04810 vs. NCBI_GenBank
Match: KUF90137.1 (Helicase [Phytophthora nicotianae] >KUF93703.1 Ribosomal RNA-processing protein 8 [Phytophthora nicotianae])

HSP 1 Score: 197.6 bits (501), Expect = 1.000e-46
Identity = 101/220 (45.91%), Postives = 143/220 (65.00%), Query Frame = 0

Query:  197 AKMKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEAVRVCVDGGAIKVAEVRSRFEGGXXXXXXXXXXXXXEGFVAACKGLGLECKKLERKNKMFFTLDFVK 417
            A+M+ +++G +FR +NE LYT+ G+ A +TF+ +PELF+ YH+G+RE A KWP NPLD  ID+V++ P+    ADFGCG+ARLA S P + VHSFDLV               ++  VTAC+IA VPL+++SV   ++CL+LMGT++ +YV+E  RV   GG +KVAEV+SRFE               EGFV   + +G +CK  + +NKMF   +FVK
Sbjct:   62 AEMRRKIDGGKFRMLNEQLYTTTGDDAFSTFQDDPELFDVYHQGFREMADKWPTNPLDTFIDFVKRHPKA-VVADFGCGDARLAESVP-NKVHSFDLV--------------SRKPIVTACNIADVPLKDSSVDIGVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFES--------ESLGGIEGFVQTLRKMGFDCKHKDERNKMFVLFEFVK 257

The following BLAST results are available for this feature:

BLAST of NO05G04810 vs. NCBI_GenBank

BLAST of NO05G04810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM27923.1	5.200e-83	69.08	ribosomal rna-processing protein 8 [Nannochloropsi...	[more]
XP_005854933.1	3.400e-66	70.10	ribosomal rna-processing, partial [Nannochloropsis...	[more]
CBJ25481.1	1.800e-54	51.98	conserved unknown protein [Ectocarpus siliculosus]	[more]
CCI42634.1	6.000e-47	46.67	unnamed protein product [Albugo candida]	[more]
ETI57395.1	1.000e-46	45.91	hypothetical protein F443_00310 [Phytophthora para...	[more]
ETK97154.1	1.000e-46	45.91	hypothetical protein L915_00272 [Phytophthora para...	[more]
ETM56816.1	1.000e-46	45.91	hypothetical protein L914_00277 [Phytophthora para...	[more]
XP_008889863.1	1.000e-46	45.91	hypothetical protein PPTG_00237 [Phytophthora para...	[more]
ETO86140.1	1.000e-46	45.91	hypothetical protein F444_00292 [Phytophthora para...	[more]
KUF90137.1	1.000e-46	45.91	Helicase [Phytophthora nicotianae] >KUF93703.1 Rib...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL085	nonsL085	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR117	ngnoR117	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003369	NSK003369	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G04810.1	NO05G04810.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|623010	gene_3298	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100285g9	gene2644	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G04810.1	NO05G04810.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G04810 ID=NO05G04810|Name=NO05G04810|organism=Nannochloropsis oceanica|type=gene|length=2654bp
TGCTGCTGCTGCTGCTGCTGCTGCGGTTTCCGTCGATGGCGTGGGGGGAG
GGAGCGAGGGGCAAGGTGTCACTGGGTGCCAAGGGAGGTTTGAGCAAGGG
GCGGGGCAACAACTTGGCGAGGAAAATGGAAGGGGTGTTATGGTTGCTAC
CGGTGATGCTGCTCTTGATGGTAGTGGTAATGGCGGACAACGACCTGCTG
GTGCCGAGGAAATGGGAAGGGTGGTGGACCCGGTGCAAGGGGGATTTAGA
CGCTGTGCATGAGGACGGTGCCATGCCGTTGGAATACGAGGAGGAGGCGA
AGGACGAAGTGAAGATGCTGAGCTGAGGCAAGGCCCCTTCGCATGCACTG
CCTGGCCTGGAGTTGGGCGCCGACCGGGACGTGGAAGCTGGCGAGGGCGG
AGGCGGCGGCATGACTGCTCCTGGTTGTAAAGGATGGTTGAGGAAAGGCA
GCTTTTACAGTATGCACGACAATGGGAAGACCCTGCTCCTGTCGTGGCGT
TTCATACGTGCAGCTGTGCATGGGGTGTGTGTGTGCAATGGAGTGACGGT
TTAAGACGATGATGTTGCTCTAGGCTGCTTCTTGGCGATTTACTTGCTGC
TTATCACGCGTCCTCCAACTATCCAAACTGTGCCCCCGCGTTAACGAATT
ATCATCCACGCTTACTCATACAACCAGCAGACCATGAGCTACAAAAGGAA
GCGCCCCTCGGCTGCTGCAGCTCCGGCTGGGGCTGTGACCGGATCAGGCA
AAGAATTAAAGGGCAGCGTCATCCGTCCACTAGGTACGATCGGACAGGCC
ACCACTATCAAACCCACAGCCGCAACGACAAAAGTGGCGCACGCCCAGGC
CCAGAAATGGAAGCATGGTGGACACAAGAACAAGAAGAAGCAAATGACGT
CTGGAGAGGCCATGGACAGCAGCAGCAGCAGCAGCAGTAGCAGAGTGTCT
CCGACAACCTCCTCCACCTCCTTGACGTCCTTGGCCGCCGCCATCAGCGC
CTCCCTCAAATCAGGTGCTGATCCTGCGACCAACACGTCGTCGACCGCAT
TTGCCTCGCCATCCTCAAGACAGCAGCAGCATAAGAAGAAGCGAACAAAG
GATAAGAAGATGGGAGCAGCGTCCCCCCCCGCCGTGCTTGCCTTCCACCC
TTCCCTCCCTCACAAGGCCCCGTCGCAGCTTAAATCGGCCAATCTGCCCG
CCAACACCGCCACCTCATTCCCACCCATCATTTCATCCCCTTCGTCGGGC
CGGCCCCTGAGCGCATTGCAAGCCAAGATGAAGGCTCGGTTGGAAGGGGC
ACGATTCCGAGACATAAATGAGATGCTGTATACGTCCGAGGGGAATCACG
CCCTCAACACCTTCAAGCAGGAGCCTGAGCTTTTCGAAGCGgtacgttaa
tgtgctcatgtacagaaatatataaaaccttatcccatcctttcgtattc
tctcgctgatttgctcattaccatatatcatcgaaatttgttttcctggt
atcctcatccctccttccctccatctctctctccctcccgttccctccct
ccttgcagTATCACAAGGGTTACCGCGAGCAAGCCCTCAAATGGCCCCGG
AATCCACTCGACGACATGATTGACTGGGTCCGGAAACAGCCACGCACACA
TTCCTTTGCTGATTTTGGCTGTGGCGAGGCCAGGTTGGCTGCCTCTTGCC
CGGCACACACGGTGCATTCCTTTGACCTCGTGGTGCCGGCCGGGGAGCAA
GGGGAAGAGGGACGGAAGGAGGGGAAGAAGCGGGTGAAGGTGACGGCGTG
TGACATAGCCCATGTGCCTTTGAGGAATGCAAGTGTCCACGGGGTTATTT
TTTGTCTGTCGTTAATGGGGACGAATATGATGGACTATGTGAAGGAGGCG
GTGAGGGTGTGTGTGGACGGAGGCGCGATCAAGGTGGCTGAAGTGAGGAG
CAGGTTCGAAGGAGGGGGAGGGGGAGGGGAAGGAGGAGGGGGGGAGGGAG
GGATTGAGGGTTTTGTGGCGGCTTGCAAGGGGCTGGGGTTGGAGTGTAAG
AAGCTAGAGAGAAAGAATAAAATGTTTTTTACTTTAGATTTTGTGAAGGT
CGGTGGTGGAGGGAAAGGAGGGGAGGGAGGCCAAATGGAGGAGGTTGCCG
GTAAGGAGGCGGCGCTGGTTGTGTCTGCACGGGAGGGAGGGGTCGGAGGA
GGGAGGGGAGGAGGGAAGGGAGGAAGAGGGGGGGGACGGTTGGACGGAGG
AGGAGGGCGGGGAGGAGATAAGGGGGATGAAGGTTCAAGAAGGGGAGGAA
GGGGGAGGGGGGAGATGGGAGGAAGAGATTGCAGGTGGAACCACGGAGGA
AAACGAGGTGGAGGAAGAGGGAGGAGTGGATTTGAAGAGATGAGCCGAGG
AAGAAGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAC
AGAGGGGGCGGGAAGGAGGAGGCGAAGGATCAGGTCTCACTTTTCAAGCC
AAACCCTGCCTCTACAAACGGCGCTAGGAACAAAAAAAGCATGAGGAGGG
CGCCGGGAGGAGGAGGAGGAATAGGAGGAGGAGGAGGTGGAGAAGTAAAA
GGAGACAGAGGAATCTCATTTATTCAAAAAAGAAAGGAATGAGTCTATAG
CAAG

protein sequence of NO05G04810.1

>NO05G04810.1-protein ID=NO05G04810.1-protein|Name=NO05G04810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=559bp
MSYKRKRPSAAAAPAGAVTGSGKELKGSVIRPLGTIGQATTIKPTAATTK
VAHAQAQKWKHGGHKNKKKQMTSGEAMDSSSSSSSSRVSPTTSSTSLTSL
AAAISASLKSGADPATNTSSTAFASPSSRQQQHKKKRTKDKKMGAASPPA
VLAFHPSLPHKAPSQLKSANLPANTATSFPPIISSPSSGRPLSALQAKMK
ARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKWPR
NPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAGEQ
GEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVKEA
VRVCVDGGAIKVAEVRSRFEGGGGGGEGGGGEGGIEGFVAACKGLGLECK
KLERKNKMFFTLDFVKVGGGGKGGEGGQMEEVAGKEAALVVSAREGGVGG
GRGGGKGGRGGGRLDGGGGRGGDKGDEGSRRGGRGRGEMGGRDCRWNHGG
KRGGGRGRSGFEEMSRGRRGGEGGGGGGGGGGGQRGREGGGEGSGLTFQA
KPCLYKRR*

Synonyms

Publications