NO05G04590, NO05G04590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04590 vs. NCBI_GenBank
Match: WP_015391992.1 (cell adhesion domain-containing protein [Clostridium saccharoperbutylacetonicum] >AGF55671.1 cell adhesion domain-containing protein [Clostridium saccharoperbutylacetonicum N1-4(HMT)]) HSP 1 Score: 147.1 bits (370), Expect = 2.400e-31 Identity = 100/340 (29.41%), Postives = 150/340 (44.12%), Query Frame = 0 Query: 202 QFFDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHGSRAPYRLVGHSLGTQLVVHATTLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAIKVAQDGTYGNGKERKKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTRICLLDAFATLGVKAYLSGWPVMMVVQREVVALRDLGIVFEQYQTS-----MIGRRGLLLRHLTAFVQLDPPDIPWYRLRARHVAAVHMYFLSFSHSVDGP 537 ++FD +KPTVIY+HG+ + T + +RE FN S+ND YG D+++ + WV +GWNIGIF+WN +DE +D E+KIWT++G GMR+R + + T S + + + F GS RL GHSLG+Q+V++ L+S + GT + LP RICLLD F + G K+YL V + V +L+ G+VFEQY++S IG ++ LTAF+ + P ++H A+ +YF +S D P Sbjct: 64 KYFDSSKPTVIYIHGWQKDKTEKLYREIFNPSHNDSSYGADVDTVNYWVDKGWNIGIFYWNQLSDESEVKDAEAKIWTTSGSKGMRWRKVDGSYNSINVPTVSAAQLFVDDYVKAMKN--FSGSE--IRLAGHSLGSQMVINGGMLIS-----------------------------------NLVDSGTISSN-----------------------------------------ILPDRICLLDPFWSKGEKSYLDNKWTGEVSRNYVTSLKTKGVVFEQYKSSNINDLWIGDSNDGMKQLTAFIDVYPDYTGLINQASKHGASRDLYF--YSMGFDAP 321
BLAST of NO05G04590 vs. NCBI_GenBank
Match: WP_051129953.1 (hypothetical protein [Caldicellulosiruptor acetigenus]) HSP 1 Score: 140.6 bits (353), Expect = 2.200e-29 Identity = 97/333 (29.13%), Postives = 148/333 (44.44%), Query Frame = 0 Query: 203 FFDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHGSRAPYRLVGHSLGTQLVVHATTLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAIKVAQDGTYGNGKERKKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTRICLLDAFATLGVKAYLSGWPVMMVVQREVVALRDLGIVFEQYQTSMIGRRGLL------LRHLTAFVQLDPPDIPWYRLRARHVAAVHMYFLSF 530 ++DPNKPTVIYVHG+ + T R FRETFN+ ND YG+DIN AD W++ GWNIGIF+W+ +DE D E+KIWT+ G MR+R KG T ++ + + + + G+ R+VGHSLG Q+ ++ +++ VA+ N + R+ LLD + ++G K YL+G V + + L++ + E Y+T+ I + + L ++ A V L P IP Y + A+HVAA ++YF+SF Sbjct: 68 YYDPNKPTVIYVHGWEKDTGIRNFRETFNYKLNDPTYGIDINIADAWIKAGWNIGIFYWDMFSDEPNVLDAEAKIWTAYGPKKMRWR---DNKGEFHESTFNKSAGQLFYETFVKALKDYKGNN--IRIVGHSLGNQMAIYLAYMVNN----------------------------------AVAKGCLPSN------------------------------------------LMIKRLALLDPYWSVGGKDYLNGKWTGEVCREYIKDLKNKNVSIELYRTTAIAQLPFVADENKELLNMVAHVNLKPWYIPAYEVGAKHVAAPNLYFMSF 319
BLAST of NO05G04590 vs. NCBI_GenBank
Match: WP_057913089.1 (hypothetical protein [Bacillus muralis]) HSP 1 Score: 136.3 bits (342), Expect = 4.200e-28 Identity = 78/212 (36.79%), Postives = 110/212 (51.89%), Query Frame = 0 Query: 139 DDAPVDMGLYFFGLDNRCEKWMPSPPVFSDSFSLPAATSSSSFFGGTKKNKSTNDLPLPRGHCQFFDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHG-SRAPYRLVGHSLGTQLVVHATTLLS 350 D +D G+Y+FG N +K++ A S+S+FG +KPT+IY+HG+ + TTA FRETFN ND G D+N+ + WV +GWN+GIF+WN ADE +D E+KIWTS+G GMR+R K T+ T+ P+ S +Q N G + + R GHSLG QLV ++ L+S Sbjct: 35 DGQTLDTGIYWFGSGNVSQKFI--------------AGQSNSYFGA----------------------SKPTLIYIHGWQKDTTASLFRETFNPKRNDATNGPDVNTVNYWVSKGWNVGIFYWNQLADEGEVKDAEAKIWTSSGPQGMRWR-----KKDGTYSTAGAPTVSAAQLFVNTYKQAMQGFTGSEVRFAGHSLGNQLVTNSAKLIS 205
BLAST of NO05G04590 vs. NCBI_GenBank
Match: WP_098350738.1 (cell adhesion domain-containing protein [Bacillus sp. AFS015802] >PFA69147.1 cell adhesion domain-containing protein [Bacillus sp. AFS015802]) HSP 1 Score: 133.7 bits (335), Expect = 2.700e-27 Identity = 100/332 (30.12%), Postives = 139/332 (41.87%), Query Frame = 0 Query: 203 FFDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHG-SRAPYRLVGHSLGTQLVVHATTLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAIKVAQDGTYGNGKERKKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTRICLLDAFATLGVKAYLSGWPVMMVVQREVVALRDLGIVFEQYQTSMIGRRGL-----LLRHLTAFVQLDPPDIPWYRLRARHVAAVHMYFLS 529 +F+ +KPTVIY+HG+ +TA RE+FN ND G D+N+ D WV +GWNIGIF+WN ADE +D E+KIW+++G GMR+R K T+ T P+ S +Q N G + RL GHSLG+Q+V + L+S GN + P R+ LLD F + K+YL G + + V L+ G+VFEQY++S I G+ + LTAF +L P I +H AA YF S Sbjct: 58 YFNASKPTVIYIHGWQNGSTAFLNRESFNPKQNDPINGPDVNTVDYWVSKGWNIGIFYWNQLADESEVKDAEAKIWSTSGPKGMRWR-----KKDGTYSTEGSPTVSAAQLFVNTYKQAMQGFTGNEVRLAGHSLGSQMVTNGAKLISDQVDS--------------------------------------GNMASNLR--------------------------------------PKRVALLDPFWSKDGKSYLGGKWTGEISREYVTQLKTKGVVFEQYKSSAITDVGIGDSNNGMTQLTAFAELKPWYISALDQVGKHGAARDWYFYS 308
BLAST of NO05G04590 vs. NCBI_GenBank
Match: XP_013754009.1 (hypothetical protein AMSG_12301 [Thecamonas trahens ATCC 50062] >KNC54117.1 hypothetical protein AMSG_12301 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 133.3 bits (334), Expect = 3.600e-27 Identity = 103/349 (29.51%), Postives = 144/349 (41.26%), Query Frame = 0 Query: 203 FFDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTIC-----PKKGHVTFYTSSRPSS-SISQQLAN-------LLTDVFHGSRAPYRLVGHSLGTQLVVHATTLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAIKVAQDGTYGNGKERKKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTRICLLDAFATLGVKAYLSGWPVMMVVQREVVALRDLGIVFEQYQTSMIGR------RGLLLRHLTAFVQL--DPPDIPWYRLRARHVAAVHMYFLSFS 531 FFDP TVIYVHG+ + TT R FRETF+W N +GLD++ A W+ +GWN+GIF+WN +ADE + E+KIWT++ + GMR+R + P T + SS PS+ S++ L D + + RLVGHSLG Q+VV A L A G N LPTR+ LLD T G K+YL + ++R V AL G+ E + S + R +R A V + DP IP + + RH +A YF +++ Sbjct: 541 FFDPGARTVIYVHGWQKTTTIRGFRETFHWKANAPAHGLDVDVAAAWLDDGWNVGIFYWNQYADEPALRHAEAKIWTASSKVGMRWRRLVVEMDGPVPMRKTVHASSPPSTPSVAHLLCQAYIALYAAADDATPPTPSDIRLVGHSLGAQVVVAAAHELHHQ-----------------------------------AAAGALPN----------------------------------------WLPLPTRVTLLDPVFTPGKKSYLGRRSIGTTLRRLVDALARYGLAVESIKYSKVNELWSGSDRSKRVRLHAAHVDMRSDPASIPKHAITHRHSSAPSHYFFAYA 814
BLAST of NO05G04590 vs. NCBI_GenBank
Match: KPA09895.1 (cell adhesion domain-containing protein [Candidatus Magnetomorum sp. HK-1]) HSP 1 Score: 130.6 bits (327), Expect = 2.300e-26 Identity = 100/340 (29.41%), Postives = 148/340 (43.53%), Query Frame = 0 Query: 203 FFDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHGSRAPYRLVGHSLGTQLVVHATTLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAIKVAQDGTYGNGKERKKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTRICLLDAFATLGVKAYLSGWPVMMVVQREVVALRDLGIVFEQYQTS------MIGRRGLLLRHLTAFVQLDPPDIPWY----RLRARHVAAVHMYFLSFSHS 533 +FDPNKPT+I+VHG+ + TT R +RE FN+ + I A+ W+R+GWN+G+F+WN ADE ++ E+KIW+++G MR+RT K S+P+S + + + G+ R+VGHSLG Q+ + T +S +A D G LPTR+ LLDAF + K YL G V ++ V+ LR G++FE Y+TS +IG + L + AF ++ PWY + +HVAAV YF S+S S Sbjct: 69 YFDPNKPTLIFVHGWQKDTTKRYYREAFNFVADGAP---SIYYAEDWIRDGWNVGVFYWNQMADEFDVKNAEAKIWSASGPKRMRWRTPDDKYHD----GPSKPASLLFYEAYRDAMQTYQGNE--IRIVGHSLGNQMAIVMTKFIS------------------------------------MAIDNNEIPG----------------------------------------HLLPTRVALLDAFYSNYPKGYLDGRWTGEVARQYVIELRVEGVIFESYRTSSASGALLIGDENIDLHKMCAFTEIK----PWYFNSIQFGYKHVAAVWHYFWSYSFS 319
BLAST of NO05G04590 vs. NCBI_GenBank
Match: ETR72169.1 (cell adhesion domain-containing protein [Candidatus Magnetoglobus multicellularis str. Araruama]) HSP 1 Score: 128.6 bits (322), Expect = 8.800e-26 Identity = 103/359 (28.69%), Postives = 143/359 (39.83%), Query Frame = 0 Query: 181 FFGGTKKNKSTNDLPLPRGHCQFFDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHGSRA-PYRLVGHSLGTQLVVHATTLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAIKVAQDGTYGNGKERKKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTRICLLDAFATLGVKAYLSGWPVMMVVQREVVALRDLGIVFEQYQTSMIGRRGLL------LRHLTAFVQLDPPDIPWYRLRARHVAAVHMYFLSFSHS 533 +FG KN+ + + ++F + PTVIYVHG+ +TT R RE FN+ N D+ A W+ +GWN+G+F+WN ADE +D E+KIWT+NG MR+R G Y ++ PS S S D R R+VGHSLG Q+ V T + + Q G + LP R+ LLD F + G K +L G V + V L D G++FE Y+TS G + L +TAF +L P W +H+AAV YF S+S S Sbjct: 85 WFGNNYKNQKA----VKGTYNRYFSESAPTVIYVHGWQNKTTQRMSRECFNYKANGAP---DMYFAQAWLDDGWNVGVFYWNQMADEGEVKDAEAKIWTTNGPRKMRWRR---SDGS---YQNNGPSESASYLFFQAYRDAMKNYRGDEIRIVGHSLGNQMAVCVTQHIK-----------------------------------EAIQSGQISS-----------------------------------------QLLPDRVALLDPFYSRGGKDFLGGKWTGEVARGYVSGLIDDGVLFELYRTSSASSTGFVGDTNSQLTDMTAFTELKPWYFGWIEQANKHIAAVWHYFWSYSFS 354
BLAST of NO05G04590 vs. NCBI_GenBank
Match: WP_044615859.1 (hypothetical protein [Gynuella sunshinyii] >AJQ92909.1 hypothetical Protein YC6258_00859 [Gynuella sunshinyii YC6258]) HSP 1 Score: 115.9 bits (289), Expect = 5.900e-22 Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = 0 Query: 202 QFFDPNKPTVIYVHGFSRRTTARRF-RETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHGSRAPYRLV-GHSLGTQLVV 343 +++D KPT+I+VHG+ T+ + R FN+ NN +G DI+ A W+ +GWN+GI++WN ADE +D E+K+WT+ G GMRYR + ++ T P SIS+ + + + + +R Y L+ GHSLG QL + Sbjct: 46 RYYDDGKPTLIFVHGWQLGTSKDNYWRPNFNFQNNAPAHGYDIDEAAAWIDQGWNVGIYYWNQFADELEVKDAEAKMWTATGPRGMRYR-----QSDGSYSTLQAPEKSISELMTDAIAEALKNNRNGYLLLHGHSLGNQLAI 183
BLAST of NO05G04590 vs. NCBI_GenBank
Match: WP_090375376.1 (hypothetical protein [Pseudomonas anguilliseptica] >SEB96342.1 hypothetical protein SAMN05421553_0096 [Pseudomonas anguilliseptica]) HSP 1 Score: 110.2 bits (274), Expect = 3.200e-20 Identity = 92/343 (26.82%), Postives = 141/343 (41.11%), Query Frame = 0 Query: 203 FFDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHGSRAPY-----RLVGHSLGTQLVVHATTLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAIKVAQDGTYGNGKERKKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTRICLLDAFATLGVKAYLSGWPVMMVVQREVVALRDLGIVFEQYQTSMIGRRGLL------LRHLTAFVQLDPPDIPWY----RLRARHVAAVHMYFLSFS 531 ++ ++PT+IY+HG+ +T ++ RETFN + G D++ A W+ G+N+G+ +WN ADE +D E+KIWTS+G MR+R +S S+ +Q ++LL + + + A Y R+ GHSLG Q+ + T +S GT + LP R+ LLD F + K+YL V V + V AL+ G++FE Y+TS G + L ++TAF +L PWY +L +H AAV Y SFS Sbjct: 55 YYVASRPTLIYIHGWQNGSTQKKNRETFNRKDAG---GPDLDLAHAWLAAGYNVGVLYWNQFADEGEVKDAEAKIWTSSGPRTMRWRN-----------SSGVYSNGPTQSASDLLFNSYKANLAGYSGSNIRIAGHSLGNQMAIVLTKKIS-----------------------------------DAVSAGTVNS-----------------------------------------KLLPKRVALLDPFYSNNAKSYLGNKWVGEVCRSYVSALKTKGVIFETYRTSGASSTGFIGDSNSGLMNMTAFSELK----PWYFNATQLTEKHNAAVWHYLWSFS 303
BLAST of NO05G04590 vs. NCBI_GenBank
Match: WP_072986209.1 (cell adhesion protein [Clostridium cavendishii] >SHJ28327.1 Ig-like domain (group 2) [Clostridium cavendishii DSM 21758]) HSP 1 Score: 108.2 bits (269), Expect = 1.200e-19 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 204 FDPNKPTVIYVHGFSRRTTARRFRETFNWSNNDKQYGLDINSADRWVREGWNIGIFFWNNHADEEMPQDTESKIWTSNGRCGMRYRTICPKKGHVTFYTSSRPSSSISQQLANLLTDVFHGSRA-PYRLVGHSLGTQLVVHATTLLS 350 FDP+KPT+IYVHG+ + + RE+F Y NSAD W++ GWN+G+F+WN +DE +D E+KIWT N GMR+R KG T+ +S+ + ++ + +G + R+ GHSLG+Q+ + T L+S Sbjct: 87 FDPSKPTIIYVHGWQPDYSIIKHRESF--------YFYGKNSADEWIKNGWNVGVFYWNQFSDEINVEDAEAKIWTINSDKGMRWR-----KGDGTYDSSNVIRKNAAELFYDEYVKALNGYKGNEIRIAGHSLGSQMTIRLTKLIS 220 The following BLAST results are available for this feature:
BLAST of NO05G04590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04590 ID=NO05G04590|Name=NO05G04590|organism=Nannochloropsis oceanica|type=gene|length=3037bpback to top protein sequence of NO05G04590.1 >NO05G04590.1-protein ID=NO05G04590.1-protein|Name=NO05G04590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=838bpback to top Synonyms
Publications
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