NO05G04420, NO05G04420 (gene) Nannochloropsis oceanica

Overview
NameNO05G04420
Unique NameNO05G04420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1240
Alignment locationchr5:1145388..1146627 +

Link to JBrowse

Properties
Property NameValue
DescriptionDehydrogenase reductase sdr family member 13
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1145388..1146627 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
BLAST of NO05G04420 vs. NCBI_GenBank
Match: EWM28043.1 (dehydrogenase reductase sdr family member 13 precursor [Nannochloropsis gaditana])

HSP 1 Score: 591.7 bits (1524), Expect = 1.600e-165
Identity = 290/371 (78.17%), Postives = 325/371 (87.60%), Query Frame = 0
Query:    1 MLTPLHWVWNGPLALGWVVGSSIVFPVLRKLGLAAEPNTLDF-TNDMRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTS-RYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPANARAVAKELWYQSDKLVIQH 370
            MLTPLHW+WNGPLALGWV  S+IVFP+LRK+GL  E N LDF  NDMRGK +IVTGSNTGIG+ATALNI KMGATV+LACRS+ERAKAA+++ML  L +LD   R+DFPFA KGT VC+ LDL SFASIK FA+++  + KRLDALVLNAGLANGSG TKEGFE+M GTNYLGHFYL KLL+DV+KATPDSR+VSVSSLMHEFGCLDWQGSL   Y +LKDR+FSSRYNDSKLALVL+TLELRHRLKGTSVRA+AVSPGAVASDIWRSFP WY+RLVLDPV SLAFLSNEQGSIPSV+AATH  +  ED ++ET+V YFHPYWSPS  FLMP+EVMGPF GF RA PRLP NARAVAKELWY+S+K VIQH
Sbjct:    1 MLTPLHWIWNGPLALGWVTSSAIVFPILRKVGLVPEANKLDFIANDMRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELWYESEKQVIQH 371          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_005854665.1 (short-chain dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU21699.1 short-chain dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 502.7 bits (1293), Expect = 1.000e-138
Identity = 249/315 (79.05%), Postives = 278/315 (88.25%), Query Frame = 0
Query:   46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTS-RYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPANARAVAKELW 360
            MRGK +IVTGSNTGIG+ATALNI KMGATV+LACRS+ERAKAA+++ML  L +LD   R+DFPFA KGT VC+ LDL SFASIK FA+++  + KRLDALVLNAGLANGSG TKEGFE+M GTNYLGHFYL KLL+DV+KATPDSR+VSVSSLMHEFGCLDWQGSL   Y +LKDR+FSSRYNDSKLALVL+TLELRHRLKGTSVRA+AVSPGAVASDIWRSFP WY+RLVLDPV SLAFLSNEQGSIPSV+AATH  +  ED ++ET+V YFHPYWSPS  FLMP+EVMGPF GF RA PRLP NARAVAKELW
Sbjct:    1 MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELW 315          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: CBN79146.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 215.3 bits (547), Expect = 3.200e-52
Identity = 136/331 (41.09%), Postives = 190/331 (57.40%), Query Frame = 0
Query:   45 DMRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAA----QEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKL-KRLDALVLNA--GLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRL--KGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPANARAVAKELWYQSDKLV 367
            D+ G+ +IVTG+NTGIG  TA N+AK GA V++ACRSLER ++A    +E+M   L  ++        A +GT   +  DLS   S++ FA+E++ K   RLD LV NA  G+ +G   T +G +++ G N++GHF L   LL ++++TP +RVV +SS+MH  G  DW+ ++         +   S Y DSKLA+V+   EL+ R    G+S  AVAV+PGAV SDIWR+ P      V D      FL++EQGS  SV AA   ALPLE         Y+ PYW P  R L PFEV GPF G     P+L  +  A    LW   ++++
Sbjct:   42 DLSGRVVIVTGANTGIGSRTAFNLAKAGAKVIMACRSLERGESARQQLEEEMRETLSKVEGGG-GASAARQGTLEVMKCDLSELESVRTFAREFKVKHGDRLDVLVNNAGVGITDGPRVTADGLDLVFGVNFVGHFCLTNELLPLIQSTPAARVVCLSSVMHHSGGTDWESAVMG-----HPKRRGSTYADSKLAMVIFAKELKKRFAAAGSSATAVAVNPGAVRSDIWRNVPKLVMP-VFDLFMRFLFLTSEQGSYTSVRAA---ALPLETVSGSG---YYQPYWMPFKRPL-PFEVFGPFVGCAPGLPKLVKDEPAATSALWTTCERVI 358          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_005832591.1 (hypothetical protein GUITHDRAFT_108486 [Guillardia theta CCMP2712] >EKX45611.1 hypothetical protein GUITHDRAFT_108486 [Guillardia theta CCMP2712])

HSP 1 Score: 187.2 bits (474), Expect = 9.300e-44
Identity = 129/331 (38.97%), Postives = 185/331 (55.89%), Query Frame = 0
Query:   46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAA----KGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGT-----TKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSF--PSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPANARAVAKELWYQSDKL 366
            M GKT+IVTG+N GIGK TA ++   GA V++ACRSL+R +AA++++   L + ++SR      +     G  +   LD+S   S+K FA     +  ++D LV NAG+ NG GT     T +G   + GTN++GHF L +LL   L  +   R+V++SS+MH +G  D    +    SS K   +  +Y +SKLA+V LT EL+ +   T V +VAV+PG VASDIWR     S   R+    ++ LA L  +QG+  SV AA    +  E+       LY  PYW PS   L PFE+MG F G     PR+  N + ++ ELW +  KL
Sbjct:    1 MEGKTVIVTGANAGIGKTTAASLYANGACVIMACRSLQRGEAARQEIEAMLASPESSRKQLWIHSDRPHPGKLLVRELDVSDLESVKRFAISIVKEFSKIDVLVNNAGI-NGMGTDIPSKTPQGIPFIFGTNFVGHFLLTRLLHPNLSKSGGGRIVNLSSVMHHWGSKD----VSKAVSSGK---YPRQYQNSKLAMVHLTAELQRQYAETRVSSVAVNPGFVASDIWRGIRPDSLVGRMFRLAMAVLA-LDTKQGAATSVAAA---CMSDEEICGSKVPLYLVPYWVPSFARL-PFEMMGVFTGVHSCPPRVSKNEKQISMELWKECTKL 318          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_017277488.1 (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Kryptolebias marmoratus])

HSP 1 Score: 176.4 bits (446), Expect = 1.600e-40
Identity = 109/260 (41.92%), Postives = 158/260 (60.77%), Query Frame = 0
Query:   46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQ--GSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304
            ++GKT+IVTGSNTGIGKATAL +AK GA V+LACRS ERA+AA         A D  R     +     + + LDL+S  S+++FA+ +     RLD L+ NAG+   SG T++GF +  G N+LGHF L  LLL+ LK    SRVV+VS+L+H FG +D+    S ++  S          Y +SKL  VL T EL ++L+GT+V   ++ PG ++++I R+   W ++L++ P++ L FL  E GS  ++H A    L
Sbjct:   34 LKGKTVIVTGSNTGIGKATALELAKRGARVILACRSKERAEAA---------AFDIRRE----SGNNQVLFMQLDLASLKSVRSFAETFLKSEPRLDILINNAGVI-ASGRTEDGFGLAFGVNHLGHFLLTNLLLERLKQCGPSRVVTVSALLHRFGSIDFPLLASRKDLVSGESTWQSIQAYCNSKLCNVLFTRELANQLEGTNVSCYSLHPGVISTEIGRNLSPW-QQLLMKPLAKLFFLDLEGGSQTTLHCALQEGL 278          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_020793398.1 (dehydrogenase/reductase SDR family member 13-like [Boleophthalmus pectinirostris])

HSP 1 Score: 175.6 bits (444), Expect = 2.800e-40
Identity = 111/258 (43.02%), Postives = 149/258 (57.75%), Query Frame = 0
Query:   46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304
            + GKT IVTGSNTGIGKATAL +AK GA V+LACRS ERA+AA  D+                +     + +PLDLSS  S++ FAQ +     RLD L+ NAG+  G+G T++GF +  G N++GHF L  LLLD LK    SR+V+V+SL+H FG +D+    Q K   L  R     Y  SKL   L T EL +RL+GT+V    V PG V +++ R+   W+   +L P+S L FL  E G+  ++H      L
Sbjct:   34 LHGKTAIVTGSNTGIGKATALCLAKRGARVILACRSKERAEAAVYDIRKE-------------SGNQQVLFMPLDLSSLQSVRDFAQTFLKTEPRLDFLINNAGVI-GAGRTQDGFGMEFGVNHMGHFLLTLLLLDRLKQCAPSRIVTVTSLLHRFGDVDFALLDQTKDLGLFTRERLQAYCHSKLCNSLFTRELANRLEGTNVSCFCVHPGVVRTELGRN-SQWWMNALLTPISRLFFLDPEGGAQTTLHCVLQEGL 276          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_022538879.1 (dehydrogenase/reductase SDR family member 13-like [Astyanax mexicanus])

HSP 1 Score: 175.3 bits (443), Expect = 3.700e-40
Identity = 109/265 (41.13%), Postives = 158/265 (59.62%), Query Frame = 0
Query:   46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFS-------SRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304
            ++GKT IVTGSNTGIGKATAL++AK GA V+LACR+ ++A+AA  D+          R +   +     + +PLDL+S  S++ FA+ +     RLD L+ NAGL  G G T++GF +  G N+LGHF L  LLLD LKA+  SR+V+VS+L+H  G +D+     N  ++ KD +           Y  SKL  VL T EL +RL+GT V   ++ PG + +D  R+   W  RL++ P + + FLS E+G+  ++H A    L
Sbjct:   34 LQGKTAIVTGSNTGIGKATALDLAKRGARVILACRNKQKAEAAVFDI----------RRE---SGNTAVLFMPLDLASLKSVRTFAETFLKTEPRLDLLINNAGLM-GPGRTEDGFGIAFGVNHLGHFLLTLLLLDRLKASGQSRIVNVSALLHRLGSVDF-----NTLNTHKDLVTGQSSWHCFKAYCHSKLCNVLFTRELANRLEGTGVTCYSLHPGVIHTDFGRNMGQW-MRLMMLPFAKIFFLSTEEGAQTTLHCALQEGL 278          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_017552357.1 (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Pygocentrus nattereri])

HSP 1 Score: 174.5 bits (441), Expect = 6.200e-40
Identity = 107/262 (40.84%), Postives = 159/262 (60.69%), Query Frame = 0
Query:   46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSLKDRLFS----SRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304
            ++G+T +VTGSNTGIGKATAL++AK GA V+LACR+ E+A+AA  D+          R +   +     + + LDL+S  S+++FA+ +     RLD L+ NAG+  G G T++GF +  G N+LGHF L  LLLD LKA+ +SR+++VS+L+H  G +D+  +  N + +L     S      Y  SKL  VL T EL + L+GTSV   ++ PG +A+D  R+   W + L+L P S L FL +E G+  ++H A    L
Sbjct:   34 LKGRTAVVTGSNTGIGKATALDLAKRGARVILACRNQEKAEAAVYDI----------RRE---SGNAAVLFMHLDLASLKSVRSFAETFLKTEPRLDLLINNAGMM-GPGRTEDGFGMAFGVNHLGHFLLTLLLLDRLKASGNSRIINVSALLHRLGSVDF--NTLNTHKALVTGQSSWHCFRAYCHSKLCNVLFTRELANHLEGTSVTCYSLHPGVIATDFVRNMSLWVRLLLLLPFSKLFFLDSEGGAQTTLHCALQDGL 279          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_024121109.1 (dehydrogenase/reductase SDR family member 13-like [Oryzias melastigma])

HSP 1 Score: 174.5 bits (441), Expect = 6.200e-40
Identity = 105/255 (41.18%), Postives = 155/255 (60.78%), Query Frame = 0
Query:   46 MRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQ--GSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAA 299
            ++GKTI+VTGSNTGIGK+TAL++AK GA V+LACR+ ERA+AA  D+                +     V +P+DL+SF S+++FA+ +     RLD L+ NAG+  G G T +GF +  G N+LGHF L  LLL+ LK    SRVV+VSSL+H  G +D+    S ++  S          Y +SKL  VL T EL + L+GT V    + PG V +++ R+  SW+++L++ P++ L FL  + GS  ++H +
Sbjct:   34 LKGKTIVVTGSNTGIGKSTALDLAKRGARVILACRNSERAEAAVFDIRKE-------------SGNSQVVFMPMDLASFKSVRSFAETFLKTEPRLDILINNAGMM-GPGRTGDGFGMAFGVNHLGHFLLTNLLLERLKQCSPSRVVTVSSLLHHLGRIDFSLLESTKDLVSGQSTWQNFQAYCNSKLCNVLFTRELANHLEGTGVTCFTLHPGVVYTELCRNI-SWWQQLLMIPIAKLFFLDTDGGSQTTLHCS 273          
BLAST of NO05G04420 vs. NCBI_GenBank
Match: XP_015807550.1 (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Nothobranchius furzeri])

HSP 1 Score: 174.1 bits (440), Expect = 8.100e-40
Identity = 113/294 (38.44%), Postives = 167/294 (56.80%), Query Frame = 0
Query:   13 LALGWVVGSSIVFPVLRKLGLAAEPNTLDFTNDMRGKTIIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALDTSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGLANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHEFGCLDWQGSLQNKYSSL---KDRLFSSRYNDSKLALVLLTLELRHRLKGTSVRAVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATHRAL 304
            LA+G  +G++ ++  +   G            ++ GKT+IVTGSNTGIG+ TA+N+A+ GA V+LACR  +R +AAQED+          R +   +     V + LDL S  S+++FA+ +     RLD L+ NAG+    G TK+GF +M G N+LGHF L  LLL+ LK +  SR+V+VSS+ H FG +D+     +K   L     R+F   Y DSKL  VL   EL  RL+GT V   A+ PGA++S++ R+  S    ++L PV+ L F +  QG   ++H A    +
Sbjct:    6 LAVGVFIGAAFIYHHIVVKGKKCTSKA-----ELHGKTVIVTGSNTGIGRTTAINLARRGARVILACRCKQRGEAAQEDI----------RRE---SGSNQVVFMQLDLGSLESVRSFAETFLKSEPRLDLLINNAGICM-QGRTKDGFGLMFGVNHLGHFLLTNLLLERLKESAPSRIVNVSSMAHNFGKIDFDSLNTHKCLGLGTSSVRVFQI-YCDSKLCNVLFNHELAKRLQGTRVTCYALHPGAISSELGRNTSS-LLHVLLKPVTVLFFKNTVQGCQTTLHCALQEGI 278          
The following BLAST results are available for this feature:
BLAST of NO05G04420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28043.11.600e-16578.17dehydrogenase reductase sdr family member 13 precu... [more]
XP_005854665.11.000e-13879.05short-chain dehydrogenase [Nannochloropsis gaditan... [more]
CBN79146.13.200e-5241.09conserved unknown protein [Ectocarpus siliculosus][more]
XP_005832591.19.300e-4438.97hypothetical protein GUITHDRAFT_108486 [Guillardia... [more]
XP_017277488.11.600e-4041.92PREDICTED: dehydrogenase/reductase SDR family memb... [more]
XP_020793398.12.800e-4043.02dehydrogenase/reductase SDR family member 13-like ... [more]
XP_022538879.13.700e-4041.13dehydrogenase/reductase SDR family member 13-like ... [more]
XP_017552357.16.200e-4040.84PREDICTED: dehydrogenase/reductase SDR family memb... [more]
XP_024121109.16.200e-4041.18dehydrogenase/reductase SDR family member 13-like ... [more]
XP_015807550.18.100e-4038.44PREDICTED: dehydrogenase/reductase SDR family memb... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003413NSK003413Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04420.1NO05G04420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629493gene_3259Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g96gene2604Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04420.1NO05G04420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04420 ID=NO05G04420|Name=NO05G04420|organism=Nannochloropsis oceanica|type=gene|length=1240bp
ATGTTGACTCCCCTGCATTGGGTTTGGAATGGACCCCTTGCCCTGGGATG
GGTCGTAGGGTCTTCTATCGTCTTCCCAGTGCTGCGGAAATTAGGCTTGG
CCGCTGAGCCCAACACACTGGATTTTACAAATGACATGCGAGGCAAGACC
ATCATCGTCACAGgtaaatttctttgctccttaggccctcatttactccc
tccttccttccattccgagagcggggtatgtgcgagagaaggttagaacg
gaaagactgatgcctcttctatcattttccccagGCAGCAACACAGGCAT
AGGCAAGGCTACTGCTCTAAACATTGCAAAGATGGGTGCCACCGTCGTTT
TGGCATGCCGCTCTCTGGAGCGGGCTAAGGCGGCTCAAGAAGATATGCTG
GTGGCGCTCAAGGCCCTGGACACCTCTCGATACGATTTCCCCTTCGCTGC
GAAAGGAACTTTTGTCTGTTTGCCCTTGGATTTGAGCAGCTTTGCGTCCA
TCAAGGCTTTTGCCCAGGAATACCGTGCTAAACTTAAGCGCTTGGATGCT
CTTGTGCTGAACGCTGGATTGGCCAATGGCTCTGGGACAACCAAGGAGGG
TTTCGAGGTGATGATGGGGACCAACTACCTCGGGCACTTTTACCTGGTTA
AGTTACTGTTGGACGTGCTCAAAGCCACCCCGGACTCCCGCGTCGTGAGC
GTGTCCTCTTTGATGCATGAATTCGGCTGCTTGGATTGGCAAGGAAGCCT
GCAGAATAAATACAGCTCTCTAAAAGACCGTCTCTTCTCAAGTCGTTACA
ATGATTCCAAGCTTGCCCTGGTACTACTCACGCTCGAGCTCCGGCACCGT
CTCAAGGGGACGTCCGTCCGAGCCGTGGCTGTCTCACCTGGAGCAGTTGC
CTCAGATATTTGGCGTAGCTTTCCGTCATGGTACAAACGGCTTGTGCTTG
ACCCCGTGTCCTCCCTCGCATTCCTCTCCAACGAGCAAGGAAGCATTCCG
AGTGTCCATGCCGCTACCCACCGAGCATTGCCTTTGGAGGACAATGAAAA
CGAGACGGATGTCTTGTATTTCCACCCGTATTGGTCACCTTCTTCGCGAT
TTCTCATGCCGTTTGAAGTCATGGGACCTTTCCATGGCTTCATTCGGGCC
GGGCCGCGTTTGCCCGCGAATGCGCGGGCTGTGGCAAAGGAATTGTGGTA
TCAGAGTGATAAACTTGTCATCCAGCACGCTCCAGCATAA
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protein sequence of NO05G04420.1

>NO05G04420.1-protein ID=NO05G04420.1-protein|Name=NO05G04420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bp
MLTPLHWVWNGPLALGWVVGSSIVFPVLRKLGLAAEPNTLDFTNDMRGKT
IIVTGSNTGIGKATALNIAKMGATVVLACRSLERAKAAQEDMLVALKALD
TSRYDFPFAAKGTFVCLPLDLSSFASIKAFAQEYRAKLKRLDALVLNAGL
ANGSGTTKEGFEVMMGTNYLGHFYLVKLLLDVLKATPDSRVVSVSSLMHE
FGCLDWQGSLQNKYSSLKDRLFSSRYNDSKLALVLLTLELRHRLKGTSVR
AVAVSPGAVASDIWRSFPSWYKRLVLDPVSSLAFLSNEQGSIPSVHAATH
RALPLEDNENETDVLYFHPYWSPSSRFLMPFEVMGPFHGFIRAGPRLPAN
ARAVAKELWYQSDKLVIQHAPA*
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