NO05G03260, NO05G03260 (gene) Nannochloropsis oceanica

Overview
NameNO05G03260
Unique NameNO05G03260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3401
Alignment locationchr5:848237..851637 -

Link to JBrowse

Properties
Property NameValue
DescriptionNAD(P)H-hydrate epimerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:848237..851637 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036652YjeF_N_dom_sf
IPR032976YJEFN_prot_eukaryotes
IPR004443YjeF_N_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Homology
BLAST of NO05G03260 vs. NCBI_GenBank
Match: EWM28046.1 (pyridoxamine 5-phosphate oxidase, putative [Nannochloropsis gaditana])

HSP 1 Score: 445.7 bits (1145), Expect = 1.400e-121
Identity = 237/359 (66.02%), Postives = 272/359 (75.77%), Query Frame = 0
Query:    1 MRSRTHLVQLLLASISHSS-------KASRPLHHHSITFLTPSLSWGSLRVLSSSATLAVAAATRKEEATTPSRSR-GTCRSFSIGPVHSNSNIAMEPSSDPSSPS-PPFFSWRQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGVELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEITTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIEGWDEEGAEGGGRE 351
            MRSRT L+Q L+AS+S SS         + P  H ++ F+T SL+WGS+R +SSS TLA A++     A      + GTCRSFS  P+HS+SN       DP   S     SWRQRITLLTQKEAQAIDEELM TPGFSVDQLMELAGLSV+ A+  FL QP RSASILILCGPGNNGGDGLVAARHL+H GY PVVVYPKR  +PLF NLVKQCEDLG+ VGV++P DIE +FDCV+DALFGFGT G LRAPF  +MQ L+++TTPIVSVDIPSGWDVE GDVY T F P+ALVSLTAPK+CAA FRGRHYLGGRFVPP ++ QY LD   LPAY G  Q VEIEGWDEEG + G ++
Sbjct:    1 MRSRTPLLQFLVASVSSSSSFAAGPTSHAHPRPHQALAFVTHSLAWGSIRAISSSITLASASSVGDLPAALNEGGKGGTCRSFSGVPLHSDSN--SNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSASILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPEDIEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGRHYLGGRFVPPGLQHQYGLDA--LPAYPGTCQCVEIEGWDEEGGDEGDKD 355          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: PKY47682.1 (NAD(P)H-hydrate epimerase [Rhizophagus irregularis])

HSP 1 Score: 250.8 bits (639), Expect = 6.600e-63
Identity = 128/232 (55.17%), Postives = 163/232 (70.26%), Query Frame = 0
Query:  108 ITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGVELP-GDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEITT--PIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337
            +  LTQK AQAIDEEL S+ GFSVDQLMELAGLSV+ A+   +   ++ + +LI CGPGNNGGDGLVAARHLFH GY P + YPK+S K L+  LV QC+ L + +  EL    +    D ++DALFGF   G +R PFD ++Q+L ++T   PIVSVDIPSGWDVE+G+V +    P  L+SLTAPK CA +F G+H+LGGRFVPP +K +Y L   +LP Y G  Q V+I
Sbjct:    3 LKFLTQKIAQAIDEELFSSGGFSVDQLMELAGLSVAQAITK-VYDNSKYSRVLICCGPGNNGGDGLVAARHLFHFGYKPNIFYPKQSKKELYERLVIQCQSLEIPIVTELSNSSLTNDNDLIVDALFGFSFTGEIRPPFDEVIQKL-KVTNIPPIVSVDIPSGWDVEKGNVNNHGLKPSMLISLTAPKLCANYFNGKHFLGGRFVPPGLKEKYEL---NLPLYPGTDQVVDI 229          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: EXX66829.1 (NADHX epimerase [Rhizophagus irregularis DAOM 197198w] >GBC26355.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis DAOM 181602] >PKC11372.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis] >PKC62297.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis] >PKK65276.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis] >PKY18998.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis])

HSP 1 Score: 250.4 bits (638), Expect = 8.600e-63
Identity = 127/232 (54.74%), Postives = 163/232 (70.26%), Query Frame = 0
Query:  108 ITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGVELP-GDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEITT--PIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337
            +  LTQK AQAIDEEL S+ GFSVDQLMELAGLSV+ A+   +   ++ + +LI CGPGNNGGDGLVAARHLFH GY P + YPK+S K L+  LV QC+ L + +  EL    +    D ++DALFGF   G +R PFD ++Q+L ++T   PIVSVDIPSGWDVE+G+V +    P  L+SLTAPK CA +F G+H+LGGRF+PP +K +Y L   +LP Y G  Q V+I
Sbjct:    3 LKFLTQKIAQAIDEELFSSGGFSVDQLMELAGLSVAQAITK-VYDNSKYSRVLICCGPGNNGGDGLVAARHLFHFGYKPNIFYPKQSKKELYERLVIQCQSLEIPIVTELSNSSLTNDNDLIVDALFGFSFTGEIRPPFDEVIQKL-KVTNIPPIVSVDIPSGWDVEKGNVNNHGLKPSMLISLTAPKLCANYFNGKHFLGGRFIPPGLKEKYEL---NLPLYPGTDQVVDI 229          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: CBN77089.1 (pyridoxamine 5-phosphate oxidase, putative [Ectocarpus siliculosus])

HSP 1 Score: 249.6 bits (636), Expect = 1.500e-62
Identity = 133/252 (52.78%), Postives = 172/252 (68.25%), Query Frame = 0
Query:   95 SSPSPPFFSWRQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEV--GVELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEI-TTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIEGWDEE 343
            SS  PP  S    I+LLT +++ A+D +LMSTPGFS+DQLMELAGLSV+ A+      P+R   +LI+CGPGNNGGDGLVAARHL+  GY P  +YPK + + LF NLV+QC+ L +E     E  GD+ G +D V+DA+FGFG KG  R PFD I++ L++   TP+VSVD+PSGW V++GD       PE L+SLTAPK  A FF G  H+LGGRFVPP +  +Y L+   LPAY G  Q V +E W ++
Sbjct:    3 SSQPPPSSS---GISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSR---VLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDL-GSYDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLE---LPAYPGSEQCVRLEEWGQQ 244          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_009040248.1 (hypothetical protein AURANDRAFT_31365 [Aureococcus anophagefferens] >EGB05122.1 hypothetical protein AURANDRAFT_31365 [Aureococcus anophagefferens])

HSP 1 Score: 249.6 bits (636), Expect = 1.500e-62
Identity = 134/236 (56.78%), Postives = 165/236 (69.92%), Query Frame = 0
Query:  105 RQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPV-VVYPKRSNKPLFVNLVKQCEDLGVEVGVELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEITTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIEGW 340
            R+ +TLL Q+ A A+D +LM +PGFS+DQLMELAGLSV+ AV      PA +  ILI+ GPGNNGGDGLVAARHL+H G   V VVYPKR ++PLF NLVKQCEDL + V   +P D  G FD V+DA+FGF   G  RAPFD I++ L   +TP+VSVD PSGW VE G        P+ LVSLTAPK+CA+ F GRHY+GGRFVPP++  +Y L+   LP Y G  Q +E+  W
Sbjct:    7 RKGVTLLGQEAAIALDVDLMESPGFSIDQLMELAGLSVACAVRD--AYPA-ADGILIVAGPGNNGGDGLVAARHLWHFGARNVRVVYPKRPDRPLFRNLVKQCEDLRIPVEDAMP-DTAG-FDVVLDAVFGFSFYGEPRAPFDEILRDLERTSTPLVSVDTPSGWHVEDGPTGPVKLAPDVLVSLTAPKKCASHFAGRHYVGGRFVPPRVAEKYGLE---LPPYLGASQILELPNW 234          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: GAX14512.1 (hypothetical protein FisN_11Hu025 [Fistulifera solaris])

HSP 1 Score: 245.0 bits (624), Expect = 3.600e-61
Identity = 126/251 (50.20%), Postives = 169/251 (67.33%), Query Frame = 0
Query:  109 TLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQ----PARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGVELPGDIE---GRFDCVIDALFGFGTKGALRAPFDAIMQRL--TEITTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIE------GWDEEGA 345
            T L+   A A+D ELMS PGF+++QLMELAGL+V+ AV   +++    P     IL++CGPGNNGGDGLVAARHL   GY  V+VYPKRS+K  FVNL KQCED+G+ V   +P D E   G +  ++D++FGF   G  R PFD+I+ RL   + +  +VSVD+PSGWDV++GDV    F P+ L+SLTAPK CA  F+GRH++GGRFVPP ++ +Y+     +P Y G  Q VE++      GW+ E A
Sbjct:   54 TYLSAAAAAALDAELMSEPGFTLEQLMELAGLAVAEAVYTVVEERRPSPQIKPKILVICGPGNNGGDGLVAARHLVLFGYECVIVYPKRSSKQHFVNLQKQCEDMGIAVLNGMPDDFEDRSGEYAAIVDSIFGFSFHGEPRVPFDSILLRLKKAQDSALVVSVDVPSGWDVDEGDVGGFGFSPQVLISLTAPKGCAKKFKGRHFVGGRFVPPYLEEKYQF---RMPKYPGTSQVVELKRVPKYTGWEAEYA 301          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_008466182.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 2.300e-60
Identity = 129/243 (53.09%), Postives = 161/243 (66.26%), Query Frame = 0
Query:  106 QRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGV--ELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEI---------TTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337
            + I+ L+Q+EA  +DE LM + GFSVDQLMELAGLSV+ +V   + + +    +L++CGPGNNGGDGLVAARHLFH GY P + YPKR+ KPL+  LV Q E L V      +LP D+   FD +IDA+FGF   GA R PFD ++QRLT +         +  IVSVDIPSGW VE+GD+  +SF P+ LVSLTAPK CA  F G  H+LGGRFVPP +  +Y L   HLP Y G    V I
Sbjct:   71 EAISYLSQREAAEVDEILMGSLGFSVDQLMELAGLSVATSVAE-VYKASEYKRVLVICGPGNNGGDGLVAARHLFHFGYKPSICYPKRTAKPLYTGLVTQLESLSVPFLTVDDLPLDLSKDFDIIIDAIFGFSFHGAPRPPFDDLIQRLTSLNDYKEANQRSPAIVSVDIPSGWHVEEGDISDSSFKPDMLVSLTAPKLCAKKFNGPHHFLGGRFVPPSIVNKYNL---HLPPYPGTAMCVRI 309          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_008466183.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 2.300e-60
Identity = 129/243 (53.09%), Postives = 161/243 (66.26%), Query Frame = 0
Query:  106 QRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGV--ELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEI---------TTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337
            + I+ L+Q+EA  +DE LM + GFSVDQLMELAGLSV+ +V   + + +    +L++CGPGNNGGDGLVAARHLFH GY P + YPKR+ KPL+  LV Q E L V      +LP D+   FD +IDA+FGF   GA R PFD ++QRLT +         +  IVSVDIPSGW VE+GD+  +SF P+ LVSLTAPK CA  F G  H+LGGRFVPP +  +Y L   HLP Y G    V I
Sbjct:   71 EAISYLSQREAAEVDEILMGSLGFSVDQLMELAGLSVATSVAE-VYKASEYKRVLVICGPGNNGGDGLVAARHLFHFGYKPSICYPKRTAKPLYTGLVTQLESLSVPFLTVDDLPLDLSKDFDIIIDAIFGFSFHGAPRPPFDDLIQRLTSLNDYKEANQRSPAIVSVDIPSGWHVEEGDISDSSFKPDMLVSLTAPKLCAKKFNGPHHFLGGRFVPPSIVNKYNL---HLPPYPGTAMCVRI 309          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_008466184.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 2.300e-60
Identity = 129/243 (53.09%), Postives = 161/243 (66.26%), Query Frame = 0
Query:  106 QRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGV--ELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEI---------TTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337
            + I+ L+Q+EA  +DE LM + GFSVDQLMELAGLSV+ +V   + + +    +L++CGPGNNGGDGLVAARHLFH GY P + YPKR+ KPL+  LV Q E L V      +LP D+   FD +IDA+FGF   GA R PFD ++QRLT +         +  IVSVDIPSGW VE+GD+  +SF P+ LVSLTAPK CA  F G  H+LGGRFVPP +  +Y L   HLP Y G    V I
Sbjct:    5 EAISYLSQREAAEVDEILMGSLGFSVDQLMELAGLSVATSVAE-VYKASEYKRVLVICGPGNNGGDGLVAARHLFHFGYKPSICYPKRTAKPLYTGLVTQLESLSVPFLTVDDLPLDLSKDFDIIIDAIFGFSFHGAPRPPFDDLIQRLTSLNDYKEANQRSPAIVSVDIPSGWHVEEGDISDSSFKPDMLVSLTAPKLCAKKFNGPHHFLGGRFVPPSIVNKYNL---HLPPYPGTAMCVRI 243          
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_023524155.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.9 bits (616), Expect = 3.000e-60
Identity = 130/244 (53.28%), Postives = 160/244 (65.57%), Query Frame = 0
Query:  105 RQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVE-VGVE-LPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEIT---------TPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337
            R+ I+ LTQKEA  +DE LM   GFSVDQLMELAGLSV+ ++   + +      +L++CGPGNNGGDGLVAARHLFH GY P + YPKR+ KPL+  LV Q E L V  V VE LP D+   FD +IDA+FGF   GA R PF+ ++QRL  +            +VSVDIPSGW VE+GD+  +SF P+ LVSLTAPK CA  F G  H+LGGRFVPP +  ++ L   HLP Y G    V I
Sbjct:    4 RESISYLTQKEAAEVDEILMGPLGFSVDQLMELAGLSVATSIAE-VYKVDEYKRVLVICGPGNNGGDGLVAARHLFHFGYNPSICYPKRTPKPLYAGLVTQLESLSVPFVSVEDLPSDLSKDFDIIIDAIFGFSFHGAPRPPFNDLIQRLVSLNEYKEAKQRFPVVVSVDIPSGWHVEEGDISDSSFKPDMLVSLTAPKLCAKRFHGPHHFLGGRFVPPSIVSKFNL---HLPPYPGTAMCVRI 243          
The following BLAST results are available for this feature:
BLAST of NO05G03260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28046.11.400e-12166.02pyridoxamine 5-phosphate oxidase, putative [Nannoc... [more]
PKY47682.16.600e-6355.17NAD(P)H-hydrate epimerase [Rhizophagus irregularis... [more]
EXX66829.18.600e-6354.74NADHX epimerase [Rhizophagus irregularis DAOM 1971... [more]
CBN77089.11.500e-6252.78pyridoxamine 5-phosphate oxidase, putative [Ectoca... [more]
XP_009040248.11.500e-6256.78hypothetical protein AURANDRAFT_31365 [Aureococcus... [more]
GAX14512.13.600e-6150.20hypothetical protein FisN_11Hu025 [Fistulifera sol... [more]
XP_008466182.12.300e-6053.09PREDICTED: pyridoxine/pyridoxamine 5'-phosphate ox... [more]
XP_008466183.12.300e-6053.09PREDICTED: pyridoxine/pyridoxamine 5'-phosphate ox... [more]
XP_008466184.12.300e-6053.09PREDICTED: pyridoxine/pyridoxamine 5'-phosphate ox... [more]
XP_023524155.13.000e-6053.28pyridoxine/pyridoxamine 5'-phosphate oxidase 1, ch... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003538NSK003538Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03260.1NO05G03260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638262gene_3134Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100044g35gene2490Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03260.1NO05G03260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03260 ID=NO05G03260|Name=NO05G03260|organism=Nannochloropsis oceanica|type=gene|length=3401bp
GGGGTCCCAATTTATTTTGACGTTTGCAGTGCACAACGCAACATGCACTC
ACACGCGATTAAAAATGAAGAAAATGTCGAAGGAGGAATGCTTGTCCGAG
TGCTTTCACATGCACACTTTTACTCTCCGTAACATTTCACCGCCGATCTC
TCTCTTTTTCTCTTTTTCTCTTGCGCCTTGTCTGTTTTATTTCTTTGTTT
CTTCGTTTCTTCTTTTTCTCGTTTTCTTATTTCACCCGGCTGGTCCTCCA
CTACCTCTCACGAACACGTATGTGCAAAGCAATCCCCCTTCTCTTCACCG
TCCAAATGCCCATCCCCCACGCAATCGCAACACCAAATGCAACGTTGAAT
CGTCACCAATATCATAATCAGATAGGCTTTTCAGCCCATCCAGCTGTTTT
CCCCCAAAAATAAGACGTTGCTGGTCAGGGGGGATTCCCTCCTTCTCAGC
AATTTTGGCCTTGACTTCATCAATGCTATCACCCTCTTCCACATCCACCG
AAATGGTCTTACCGTTCAGAGTCTTGACATTAATCTATGGGGCAAGGGGA
GAGAGAAGGAGGGGGAGGGGTTGAGATAGGAGGGACGGGGCATATGGGTG
GACGTGGAAGACAAGGATTCTAAGGGTTCAAAAGGTCATCGATGGATGCG
AAGTGGGGTGTGAAACAGACCACAGCAGCCACGTTTTGAGTTCTTAACCT
GCCGCGCAGAATTTCCTCCATTCAGATCCATATGTGCCTTTCTCTCGTAT
GTTGCATGTGATGATGCCATACCAAATGTGCACTGATCCTGAGCCTGCGT
CCCGCGGAGCCAACCACAACCCTCCCTGGTCATCATCACATGACCTAAGA
TAATGTGTTGATGTACACAGCCATTTGCTTACTCTCCGCATACACTCTCA
ACCGGGTCTGCCCCAGCCCATCCCTTGCCCCAGCCCCGTCCTCCCTCCCT
TTTCCTCCTCTCCAATCCACCCAACAAGGCACATGACGTACCTGCATGCC
ACCCCGGACGCTCATGAGGCGTTGAAAGGCGGATGGCTGTTGTGTTCCAC
CACGGACGGTGCAAAACAGGCCCGGGGACATGCCCATGGCGGCTGAGGAC
GTGTGGATAAGGGAGGCGAGGACCAGCATCACCAGGACCTGGAGGCTTTT
GGACTTACTGCTTCTTGAGACCATGGTGGCTTGCGTTGAAGCGAACGAAG
AGGTCTACGGATGTGCGTAGGAAGAGGATGGAGGGATTTGAGTGCTGGTG
TTGATTAAAGGGTTGTGCATGTCGCTTTTGTGGCCTCCGGTGGCAAGGCA
AAGCCCGCCCTCAGGCTCCAATCGTCATCATATGCCCCATCAACTACTAG
TGCTATTTGTTCTAAGCGGCTTCACCCCTGCCCTTCAAACACACTCACAA
ACTCCTCGTTCATATTCATACCATACAGTTGAATGAGGAGCCGGACACAT
CTCGTACAACTTTTGTTGGCATCAATTTCCCATTCTTCGAAGGCTTCTCG
TCCTCTACATCACCACTCCATCACGTTCCTGACCCCCTCCTTGTCTTGGG
GCTCCCTCCGTGTCCTATCCTCGTCCGCCACGCTAGCCGTTGCCGCCGCC
ACACGGAAGGAAGAGGCCACTACCCCCAGCAGGAGCAGAGGCACGTGTCG
ATCCTTTTCGATCGGTCCAGTTCACAGCAACAGCAATATCGCCATGGAAC
CCTCCTCCGACCCGTCCTCCCCCTCTCCCCCTTTCTTCTCCTGGCGACAG
CGCATCACACTTCTCACCCAAAAAGAAGCTCAAGCCATAGACGAAGAGTT
AATGAGCACTCCTGGTTTCTCCGTCGATCAACTAATGGAGCTAGCAGGCT
TGTCGGTCTCCCATGCTGTCGACCACTTCCTCCAACAACCCGCCCGGTCT
GCCTCCATCCTCATTCTCTGCGGGCCGGGAAATAACGGAGGCGATGGTCT
AGTGGCTGCGCGTCATTTGTTTCATCTTGGGTACTGTCCTGTGGTTGTCT
ATCCGAAGCGATCGAACAAGCCTTTGTTCGTCAACTTGGTCAAGCAGTGC
GAGGACCTGGGGGTGGAGGTGGGGGTGGAACTCCCAGGGGATATCGAGGG
CAGGTTCGATTGTGTCATAGATGCCTTGTTTGGCTTCGGAACGAAGGGGG
CATTACGGGCGCCATTCGATGCGATCATGCAGAGGCTAACCGAGATTACT
ACGCCCATTGTGTCGGTGGATATCCCGTCAGgtaatgagggaaggaggga
gggaggaagggagaggagggagggagggccatggcattcagtcacaccta
ctcattaacaaatcgttcaacccacctttaattctccgaaccaccatgtc
aattatgcagGGTGGGATGTCGAGCAAGGCGACGTCTATCACACTAGCTT
CATGCCCGAGGCCCTCGTCTCCCTCACGGCGCCCAAAAGATGCGCTGCAT
TCTTCCGGGGCCGCCACTACCTAGGCGGACGCTTCGTGCCTCCTAAAATG
AAGGTTCAATACCGCTTGGATGAAGAGCATTTGCCGGCGTATCAGGGCAT
CCGTCAATTTGTCGAGATCGAGGGCTGGGACGAGGAAGGGGCCGAGGGAG
GGGGGAGAGAGGGACAGGCGGCGAGGACATAATCCACAAGTCCTTGACTC
CCACGCCAGTGTTCCTCCCTCCCTCTTCCATCTCCACCGCTACTCCATCT
GATGAGGCCACAGGACGCACCAGCGGTCCAACTCACACAGGCACGAGCAC
GGGGACCACTTCACCCCAACACCCTGAGTTTGTCGTTGTCTGGATAACTG
CCCCTAACCCCGCCGAAGCAGCCAAGCTCGCAGAGGGCCTCGTACATCAC
GACCTGGCGGCATGCGTCAATCTGGTGCCTAACATCGAGTCCGTCTACAA
ATGGGAGGGAAAGGTCGAACGAAGTGGAGAGGTATTGATGATGGCAAAAA
CACGGGGGAGCCTGTTAGGTGAGCTGTCAGCGTTTGTCCTCAAGCATCAT
TCCTATGAAGTGCCCGAGACGATAGCGGCAGGCATTGTAGGAGGGGGGGA
TGAATATCTTCAATGGTTGCGCGATAGCACTCGAAAGCCAAAGGAGGAAG
CGGGGAGGGAAGTGAAATGAGATGGAGGAGAGACTGAAATAAGACCGAAA
TGATAGCGGAGTGGAGAAAAAGTGGAGGGAGGAGGAAGAGAGACATGCTC
AAGACCATTATTATATAGGGAGAGAGCAACGGGTAAGGGTTATGGGTACA
GAGAGATGGGTGGACGAAGGGTCGGATGAGTAGAGACATGTGACTGAAAA
ACGAGAGGGGAGGATAGGAGAGAGTGTACAAAGTTATACAAAGAGCCTGT
TAAGGATAATAGAAGTAGCTATGGACACAGACGGGCGAGGGGGAGAGGGT
G
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protein sequence of NO05G03260.1

>NO05G03260.1-protein ID=NO05G03260.1-protein|Name=NO05G03260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MRSRTHLVQLLLASISHSSKASRPLHHHSITFLTPSLSWGSLRVLSSSAT
LAVAAATRKEEATTPSRSRGTCRSFSIGPVHSNSNIAMEPSSDPSSPSPP
FFSWRQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFL
QQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFV
NLVKQCEDLGVEVGVELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQ
RLTEITTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG
RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIEGWDEEGAEGGGRE
GQAART*
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Synonyms
Publications