NO05G02670, NO05G02670 (gene) Nannochloropsis oceanica

Overview
NameNO05G02670
Unique NameNO05G02670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3780
Alignment locationchr5:707204..710983 -

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Properties
Property NameValue
Description26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:707204..710983 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR033008CSN1
IPR01958526S_proteasome_reg_su-Rpn7
IPR000717PCI_dom
Homology
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_020880001.1 (COP9 signalosome complex subunit 1 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 388.7 bits (997), Expect = 3.400e-104
Identity = 197/415 (47.47%), Postives = 276/415 (66.51%), Query Frame = 0
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRCKGR---ELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            I     D+EAYAA Y G TK+ RLLFIA  C G    +L+A R+A D +K+    N +L+REVV  + GRLG  Y +DS+W + ++++A  +K +LE++L S RT+L KESIR+GY D G+FYYA G L +A KN++RTRDYC+ T+H + MC+N I V++ +  F+HV +YV KAE  PD  DP    KL+ A+GL  L  + Y  AARKFL+           N      + +V+A +D+A YGGLCALAS DR+EL+++V+DN+ FR  L+LVP +RELI DF  S+Y  CL  L ++K  L+LD+HL  HV  LY QIR++  +QY  P++SVDL+RM++AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   ++KV  MG +F R+VRAMLLR +L++H
Sbjct:   29 ISGEPLDIEAYAALYKGRTKIMRLLFIANHCGGNHAIQLEALRMAYDEIKK--GENTQLFREVVNKIGGRLGDKYGMDSSWCEAVDRRAEQKKGKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPDPLDPIVIAKLRCASGLAHLELKKYKLAARKFLDV----------NPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPEVRELINDFYSSRYASCLEYLASLKANLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAMLLRANLLKH 431          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_002465983.1 (COP9 signalosome complex subunit 1 [Sorghum bicolor] >EER92981.1 hypothetical protein SORBI_3001G532100 [Sorghum bicolor])

HSP 1 Score: 387.9 bits (995), Expect = 5.700e-104
Identity = 198/414 (47.83%), Postives = 283/414 (68.36%), Query Frame = 0
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            + A   D+EAYAA+Y G T++ RLLFIA RC  +  +L+A R+A D +K RG  +V+L+R+V   + GRLGP + LD AW D + ++A  +KE+LE++L   RT+L KESIR+GY D+G+F+YA G L +A K+++RTRDYC+ ++H V MC+NVI V++ L  ++HV+ YV+KAE TPD  DP    KLKAAAGL  L  + Y  AARKF+E G+      +  +N    +++V+A +DVAVYG LCALAS DR++L+ +V+DN+ FR  L+LVP +REL+ DF  S+YG CL  L  +K  L+LD+HL  HV  LY  IR +  +QY  P++SVDL  M+ AF   V  +EKE+A LI  N++ AR+DS  K L+ R  D R   +++V   G DF R+V++MLLR +L++H
Sbjct:   30 VSAEQLDVEAYAAQYSGRTRLARLLFIADRCGVEAMQLEALRMAYDEIK-RGE-DVQLHRDVAAKIGGRLGPRFGLDQAWVDTVTRRADQRKEKLENELNGYRTNLIKESIRMGYNDIGDFFYAHGQLSDAFKSYIRTRDYCTTSKHIVQMCMNVILVSIELGQYAHVSNYVSKAEQTPDSLDPVIVAKLKAAAGLANLETKKYKFAARKFVETGI------ELGNN----YSEVIAPQDVAVYGALCALASFDRSDLKSKVIDNINFRNFLELVPEVRELVNDFYASRYGSCLGHLEKLKPNLLLDIHLHEHVETLYMDIRHKAIIQYTLPFISVDLNLMATAFKTSVSMLEKELAALITENKIQARIDSHNKILYARHADQRNATFQRVLQTGNDFERDVKSMLLRANLLKH 431          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: ONL92927.1 (fusca-like protein [Zea mays])

HSP 1 Score: 387.9 bits (995), Expect = 5.700e-104
Identity = 198/414 (47.83%), Postives = 285/414 (68.84%), Query Frame = 0
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            + A   D+EAYAA+Y G T++ RLLF+A RC  +  +L+A R+A D +K RG  +V+L+R+VV  + GRLGP Y LD AW   + ++A  +KE+LES+L   RT+L KESIR+GY D+G+F+YA G L +A K+++RTRDYC+ ++H V MC+NVI V++ L  ++HV+ YV+KAE TPD  DP    KLKAAAGL  L  + Y  AARKF+E G+      +  +N    F++V+A +DVAVYG LCALAS DR++L+ +V+DN+ FR  L+LVP +REL+ DF  S+YG CL  L  +K  L+LD+HL +HV  LY +IR +  +QY  P++SVDL  M+ AF   V  ++KE+A LI  +++ AR+DS  K L+ R  D R   +++V   G DF R+V++MLLR +L++H
Sbjct:   32 VSAEQLDVEAYAAQYSGRTRLVRLLFVADRCGVEAMQLEALRMAYDEIK-RGE-DVQLHRDVVTKIGGRLGPRYGLDQAWVFSVSRRADQRKEKLESELNGYRTNLIKESIRMGYNDIGDFFYAHGQLSDAFKSYIRTRDYCTTSKHIVQMCMNVILVSIELGQYAHVSNYVSKAEQTPDSLDPTIVAKLKAAAGLANLETKKYKFAARKFVETGI------ELGNN----FSEVIAPQDVAVYGALCALASFDRSDLKSKVIDNINFRNFLELVPEVRELVNDFYASRYGSCLGHLEKLKPNLLLDIHLHQHVETLYMEIRHKAIIQYTLPFISVDLNTMAAAFKTSVSMLQKELAALITEDKIQARIDSHNKILYARHADQRNATFQRVLQTGNDFERDVKSMLLRANLLKH 433          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: CDP08878.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 387.9 bits (995), Expect = 5.700e-104
Identity = 203/414 (49.03%), Postives = 271/414 (65.46%), Query Frame = 0
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRCK--GRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            I     D+EAYAA Y G TK+ RLLFIA RC     +L+A R+A D +K+    N  ++R+VV  + GRLGP Y  D AWAD ++++A  ++E+LE++L + RT+L KESIR+GY D G+FYYA G L  A KN+VRTRDYC+ ++H V MCLN I V++ +  F+HV +YV+KAE TPD  D     KL  AAGL  L  + Y  AARKFLE G       +  +N    + +V+AA+DVA YGGLCALAS DRTEL+ +V+DN  FR  L+LVP +RELI DF  S Y  CL  LG +K  L+LD+HL  HV  LY QIR +  +QY  P++SVDL  M+ AF   +  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+VRAMLLR SL++H
Sbjct:   36 ISGEQLDVEAYAALYSGRTKIMRLLFIAERCDNVSMQLEALRMAYDEIKK--GENTHIFRDVVQKIDGRLGPNYGPDPAWADAVDRRAEQRREKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALAEAFKNYVRTRDYCTTSKHIVHMCLNAILVSIEMGQFTHVTSYVSKAEQTPDAVDAVTSAKLHCAAGLAHLEGKKYKLAARKFLETG------PELGNN----YTEVIAAQDVATYGGLCALASFDRTELKSKVIDNSNFRNFLELVPEIRELIQDFYTSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLRMMANAFKTSIAGLEKELEALITENQIQARIDSHNKVLYARHADQRNATFQRVLQTGGEFDRDVRAMLLRVSLMKH 437          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_009411462.1 (PREDICTED: COP9 signalosome complex subunit 1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 387.9 bits (995), Expect = 5.700e-104
Identity = 200/408 (49.02%), Postives = 274/408 (67.16%), Query Frame = 0
Query:  105 DLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            D+EAYAA Y G TKV RLLFIA RC  +G +L+A+RLA D +K+    +  LYRE +  +  RLGP Y +D  WAD ++++A  +KE+LE++L   +T+L KESIR+GY DL +F+YA G L +A KN+VRTRDYC+ ++H + MCLNVI V++ L  F HV+ YV+KAE TP+  DP    KL+ AAGL  L  + Y  AARKFLE G       +  +N    + +V+A +DVA+YGGLCALAS DRTEL+ +V+DN+ FR  L+LVP +RELI DF  S+Y  CL  L  +K  L+LD+HL  HV  LY +IR +  +QY  P++SVDL  M+ AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+VRAML+R +LV+H
Sbjct:   49 DVEAYAALYTGRTKVARLLFIAERCGNEGMQLEAFRLAHDEIKK--GEDSHLYREAMAKIGDRLGPRYAIDQVWADAVDRRAEVRKEKLENELNIYKTNLIKESIRMGYNDLADFFYAHGQLGDAFKNYVRTRDYCTTSKHIIHMCLNVILVSIELSQFMHVSNYVSKAEQTPEQLDPVTHSKLRCAAGLAHLETKKYKLAARKFLETG------HELGNN----YTEVIAPQDVAIYGGLCALASFDRTELKNKVIDNVTFRNFLELVPEVRELINDFYASRYASCLEYLENLKPNLLLDIHLHDHVETLYTEIRHKAIIQYTIPFISVDLHTMAGAFKTNVVGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGVEFERDVRAMLVRANLVKH 444          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_016735215.1 (PREDICTED: COP9 signalosome complex subunit 1-like [Gossypium hirsutum])

HSP 1 Score: 387.5 bits (994), Expect = 7.500e-104
Identity = 200/408 (49.02%), Postives = 272/408 (66.67%), Query Frame = 0
Query:  105 DLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            D+EAYA  Y G TK++RL+FIA  C   G +L+A R+A D +K+    N  LYREVV  + GRLGP Y +D+AW   +E++A  +KE+LES+L + RT+L KESIR+GY D G+FYYA G L +A K++VRTRDYC+ ++H + MCLN I V++ +  FS+V +YV+KAE TP+  DP    KL  AAGL  L  + Y  AARKFLE G                +++V+A +DVA YGGLCALAS DRTEL+ +V+DN+ FR  L+LVP +RELI DF  S Y  CL  LG +K  LMLD+HL  HV  LY QIR +  +QY  P++SVD+  M++AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F +EVRAMLLR+SL+++
Sbjct:   46 DIEAYAGLYTGRTKIKRLMFIANHCDNPGMQLEALRMAYDEIKK--GENTHLYREVVQKIDGRLGPNYAMDAAWGSTIERKAEQRKEKLESELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIQMCLNAILVSIEMVQFSNVTSYVSKAEQTPEALDPPIVAKLCCAAGLAHLEAKKYKLAARKFLEVG----------PELGTSYSEVIAPQDVATYGGLCALASFDRTELKNKVIDNINFRDFLELVPEVRELINDFYSSHYASCLEYLGNLKSNLMLDIHLYDHVETLYDQIRNKALIQYTLPFVSVDMRMMADAFKTSVVGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDQEVRAMLLRSSLLKY 441          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_022770356.1 (COP9 signalosome complex subunit 1 [Durio zibethinus])

HSP 1 Score: 387.5 bits (994), Expect = 7.500e-104
Identity = 197/414 (47.58%), Postives = 273/414 (65.94%), Query Frame = 0
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            I     D+EAYA  Y G TK+ RLLFIA  C   G +L+A R+A D +K+    N +L+REVV  + GRLGP Y +D+ W   ++++A  +KE+LE++L + RT+L KESIR+GY D G+FYYA G L ++ K++VRTRDYC+ ++H + MCL+ I V++ +  F+HV +YV+KAE TP+  DP    KL+ AAGL  L  + Y  AARKFLE G            +   +++V+A +DVA YGGLCALAS DRTEL+ +V+DN+ FR  L+LVP +RELI DF  S Y  CL  LG +K  LMLD HL  HV+ LY QIR +  +QY  P++SVDL  M++AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+VRAMLLR +L++H
Sbjct:   42 ISGEPLDIEAYAGLYTGRTKIMRLLFIADHCDNPGMQLEALRMAYDEIKK--GENTQLFREVVQKIDGRLGPNYSMDATWCTMVDRKAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDSFKSYVRTRDYCTTSKHIIQMCLSAILVSIEMGQFTHVTSYVSKAEQTPEALDPLTVSKLRCAAGLAHLEAKKYKLAARKFLEVG----------PESGNSYSEVIAPQDVATYGGLCALASFDRTELKNKVIDNINFRNFLELVPEVRELINDFYSSHYASCLEYLGNLKSNLMLDFHLHDHVATLYDQIRSKALIQYTHPFVSVDLRMMADAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVRAMLLRANLLKH 443          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_012437659.1 (PREDICTED: COP9 signalosome complex subunit 1-like [Gossypium raimondii] >KJB49394.1 hypothetical protein B456_008G117100 [Gossypium raimondii])

HSP 1 Score: 387.1 bits (993), Expect = 9.800e-104
Identity = 200/408 (49.02%), Postives = 272/408 (66.67%), Query Frame = 0
Query:  105 DLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            D+EAYA  Y G TK++RL+FIA  C   G +L+A R+A D +K+    N  LYREVV  + GRLGP Y +D+AW   +E++A  +KE+LES+L + RT+L KESIR+GY D G+FYYA G L +A K++VRTRDYC+ ++H + MCLN I V++ +  FS+V +YV+KAE TP+  DP    KL  AAGL  L  + Y  AARKFLE G                +++V+A +DVA YGGLCALAS DRTEL+ +V+DN+ FR  L+LVP +RELI DF  S Y  CL  LG +K  LMLD+HL  HV  LY QIR +  +QY  P++SVD+  M++AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F +EVRAMLLR+SL+++
Sbjct:   46 DIEAYAGLYTGRTKIKRLMFIANHCDNPGMQLEALRMAYDEIKK--GENTHLYREVVQKIDGRLGPNYAMDAAWCSTIERKAELRKEKLESELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIQMCLNAILVSIEMVQFSNVTSYVSKAEQTPEALDPPTVAKLCCAAGLAHLEAKKYKLAARKFLEVG----------PELGNSYSEVIAPQDVATYGGLCALASFDRTELKNKVIDNINFRDFLELVPEVRELINDFYSSHYASCLEYLGNLKSNLMLDIHLYDHVETLYDQIRNKALIQYTLPFVSVDMRMMADAFKTSVVGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDQEVRAMLLRSSLLKY 441          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: GAQ91475.1 (hypothetical protein KFL_007920040 [Klebsormidium nitens])

HSP 1 Score: 387.1 bits (993), Expect = 9.800e-104
Identity = 200/424 (47.17%), Postives = 278/424 (65.57%), Query Frame = 0
Query:   93 RCGSDDIDAPNFDLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEHGVCV 515
            R  + D   P+FDLE Y + Y+G TK+ RL FIA +C     EL+A R+ALD +K+    N ++Y E +  V GRLG AYQ D  W +  EKQAA ++ERLE +L   +T+L KESIR+GY DLG+F+YARGDL  A K++VRTRDYC+ ++H ++MCLNVI V++ L  F +V  YV KAE TPD  DP  + KLK AAGL  L  + Y  AARKF++           N      + +V+A +DVA+YG LCALAS DR +L+ +V+DN++FR  L+LVP +RELI DF  S+Y  CL  L  +K +L+LD+HL  HV  LY+QIR +  +QY +P++SVDL RM+ +F   V  +EKE+A LI  N++ AR+DS  K L+ R  D R   ++K   +G D+ R+ +A+LLR +L++H   V
Sbjct:   12 RPSTSDDGGPHFDLETYTSNYMGHTKIIRLRFIAEKCSDSAMELEALRMALDEIKK--GDNTQVYIETIERVRGRLGRAYQHDREWVNTKEKQAAQRQERLELELNGYKTNLIKESIRMGYNDLGDFFYARGDLQAAFKSYVRTRDYCTTSKHIINMCLNVILVSIELGHFVNVTNYVQKAEQTPDNTDPVIQGKLKCAAGLAHLENKKYKLAARKFVDV----------NFELGTQYKKVIAPQDVALYGALCALASFDRADLKSKVIDNISFRNFLELVPDIRELINDFYASRYASCLGYLQKLKPDLLLDVHLFDHVDTLYEQIRHKALIQYTTPFISVDLNRMAASFKTNVAGLEKELAALIMENQIQARIDSHNKILYARHADQRNTSFQKALQVGADYQRDTKALLLRANLMQHDFVV 423          
BLAST of NO05G02670 vs. NCBI_GenBank
Match: OEL29857.1 (COP9 signalosome complex subunit 1 [Dichanthelium oligosanthes])

HSP 1 Score: 387.1 bits (993), Expect = 9.800e-104
Identity = 195/412 (47.33%), Postives = 281/412 (68.20%), Query Frame = 0
Query:  101 APNFDLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            A   D+EAYA +Y G T++ RL+F+A RC  +  +L+A R+A D +K R   +V+L+R+V   + GRLGP Y LD AW D + ++A  +KE+LE++L   RT+L KESIR+GY D+G+F+YA G L +A K+++RTRDYC+ ++H V MC+NVI V++ L  F+HV+ YV+KAE TPDL DP    KL+AAAGL  L  + Y  AARKF+E G+      +  +N    +++V+A +DVAVYG LCALAS DR++L+ +V+DN+ FR  L+LVP +REL+ DF  S+YG CL  L  +K  L+LD+HL  HV  LY  IR +  +QY  P++SVDL  M+ AF   V  +EKE+A LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+V++MLLR +L++H
Sbjct:   32 AEQLDVEAYAGQYSGRTRLARLIFVAERCGVEAMQLEALRMAYDEIKRR--EDVQLHRDVAHKINGRLGPRYGLDQAWVDNVSRRAEQRKEKLENELNGYRTNLIKESIRMGYNDIGDFFYAHGQLSDAFKSYIRTRDYCTTSKHIVQMCMNVILVSIELGQFAHVSNYVSKAEQTPDLLDPIIVAKLRAAAGLANLETKKYKLAARKFVETGI------ELGNN----YSEVIAPQDVAVYGALCALASFDRSDLKSKVIDNINFRNFLELVPEVRELVNDFYASRYGSCLGHLEKLKPNLLLDIHLHEHVETLYTDIRHKAIIQYTLPFISVDLNTMATAFKTSVSMLEKELAALITENKIQARIDSHNKILYARHADQRNTTFQRVLQTGNEFERDVKSMLLRANLLKH 431          
The following BLAST results are available for this feature:
BLAST of NO05G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_020880001.13.400e-10447.47COP9 signalosome complex subunit 1 [Arabidopsis ly... [more]
XP_002465983.15.700e-10447.83COP9 signalosome complex subunit 1 [Sorghum bicolo... [more]
ONL92927.15.700e-10447.83fusca-like protein [Zea mays][more]
CDP08878.15.700e-10449.03unnamed protein product [Coffea canephora][more]
XP_009411462.15.700e-10449.02PREDICTED: COP9 signalosome complex subunit 1 [Mus... [more]
XP_016735215.17.500e-10449.02PREDICTED: COP9 signalosome complex subunit 1-like... [more]
XP_022770356.17.500e-10447.58COP9 signalosome complex subunit 1 [Durio zibethin... [more]
XP_012437659.19.800e-10449.02PREDICTED: COP9 signalosome complex subunit 1-like... [more]
GAQ91475.19.800e-10447.17hypothetical protein KFL_007920040 [Klebsormidium ... [more]
OEL29857.19.800e-10447.33COP9 signalosome complex subunit 1 [Dichanthelium ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003601NSK003601Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02670.1NO05G02670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553582gene_3070Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100036g40gene2433Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02670.1NO05G02670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02670 ID=NO05G02670|Name=NO05G02670|organism=Nannochloropsis oceanica|type=gene|length=3780bp
TTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTTGAAGAATTCTTCCC
ACATTTGGAGCACGGTCCATCCTGCTACTAAAGCCCAGAGGTGAGCGCTG
TCTCTGGCGCTGACATCACCGACAACCCCCTCCGAATCTGCGGTTGGTGG
TGGCGGCGAGTGAGGGGGTAGCAAGCGCAGTAATGTCTGGTGCTGTAGGA
TGATGAAGGCGTAGGTGCGTTGAAACAGCTCAGAATACCGACTCAACTGC
AGTAAGAGGCCCGCTTCCCGTGCAAAGAGGTACTGCTGTACTTCGAGCAT
CCCAATGCTGCTCCCTGACTTCTCGCTGCCTTCTTGCCCCGTCGTTGCCC
CGAGCTTCGCTCGAAATTCAAAGACGGGAAAATCCAATACGGGAACACCA
CCACCGGCCATCGCGTTCATCCCACCACCTCTACCACCACTAGAAGAAGC
CACTCGACTGGGCTGAAACATCATCAGGGTCTTGGGCGGCATGATCACGC
TATTTCCACTACTACTACCACTACTACTACTACTACTACTACTACTCCTC
CTCCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTACCACTACTACC
ACCACCACCACCACCACCACCACTACTCCTCCCAAAGTCGGCAGCAGAAG
AGGGCATCAGAGCCGCTTGCCAGCGATTGGTTAAAGCAGACAATTCCTGA
TAATGATGCAAAGCCTCCCCCGGAAGCTGAAGTTGCTCATTCATCAATGC
CAAGCTCTCCTTGGCAAAAAACAAGCGGAAAAAGAAATCTTCCCCAGGGG
CAGCAGCAGCAGCAGCAGCAGTGGCAGTACGACTAGAGGCCCCTTCCTCC
AACTCACGGACCTGCTCCTGATAAGCCTTCGAACGGGCAATAAATGTGTT
CCCCACTACCGTCTTAATTTTCGCCATAACATCCCCCCACTGCTCCTGAT
GATTCTGCTGCAGAATGATGCCGTTCCCCGCCCCGGTACCTGCGGGCCCT
CGCCCCCCCATGGAACCCGACACACCCTGCTCAAACAGCGTCAACATACT
CGACCGGTCCCCCGTCACTTTGCTACAAAAGTCCGCCGCTATCCTCGAAT
AAATCTTGAGGTATATATCATGCGTGTTGTTCTGCGTGCCCAAGGGGACA
TAGACCAACAACCATTCTTCGTGCCGCTCTGTTCGCTCGTCGACCCAGGC
CTTGACCTTGGCCTTTACAGCGGTCTTGTACGCCTCGGTCGTCTCACAAA
CCACTAGATTTAGATGCGCATATGGAGCGCGATAATCGCTCGTACGACCT
CCGTCTCGTCCTCCCAGGTTTCTGAAGAGGGCATGGTCGTGGGCTACCAC
TTGCACAGGCAGCCTCGAGATCGTGACGAGGGTGCTGCCCGAGGTGCCCG
AAGGCAGCCGGGTGCGCCAAGCTACATCTCTCAGGGGAAGTTGCGCCTTA
AAATACCGCTCCAAAAACTGCCAGACTTGTCCGAGCTCGTCATGGTAGGC
CAAGGCACACACGGTGGAGGTGGTTGGAGTGGTGGAGTGGGAGGCAGAGT
TGGAGGAGAGGGAGGACTTTGGGCCAGAGGAGGAGAGCAGTGGAGGCGGA
TGCAACGGCCGTGGGGGCGGGTCCATGGCCTTGATATATCGTACCCTGCT
GCTGCGCTGAGGACGAGATAGTGAGAAACGCACGTAAAAGTGAGAACAAC
AGAGTTGTTGTGTTGAGCAAGGGCATGGTGAAGAAGCAAGAGCGAACGTC
GCGCCTCCTCTCGCCGGACGCGCTTGAGGTTTGTTCCAAGACCCACATAT
CGCAACCCTTACCACACACCACAGACAAATATCAGCCTCAAATGCAAGCG
GCAGCGCCCAACGTGGAGGAGAGGGACATGGAGGTAGTGGACGCCAACGC
TCTTGACGCGGAAGAGGGAGGAGGTGAGGGTGCTCATTCAGCCTCGTCCT
CGGCTGCACCAGCAGCCCAAACCTGCAGCACAAACAACACGAGCAGCAGT
AGATGCGGCAGCGATGACATTGATGCGCCCAATTTCGgtacgtttttgat
agtgacgctgggtgtctcgagtaaagagtcaatgttgactctccccttgt
gcctcctatcatttttcgtaagacttcctctcttcttattctgtgcccgc
gccccgcctttccacaaacccgcctcgcgctccccgccacttggctactt
tttaccaggcctgcgtgctctcttcctttatttgttcctacccattaacc
cggtcgcccaccttcctctctgtacccccaatccttttaatcccaccctt
tttagACCTCGAAGCCTACGCGGCCAGGTACGTTGGCCCCACCAAGGTCC
GTCGCCTACTCTTTATTGCGCCCCGTTGCAAGGGTCGGGAGCTGGACGCG
TACCGCCTTGCCTTGGATACCCTGAAAGAGCGGGGATCGATGAATGTGGA
GCTGTACCGGGAGGTGGTGGGTTTGGTTGCTGGCCGTTTAGGTCCTGCGT
ATCAGCTGGACTCTGCATGGGCGGATGGGCTTGAGAAGCAGGCAGCGGCA
CAGAAGGAACGGTTAGAGAGTGATTTGCAGAGTTCGCGGACGAGTTTGGC
GAAGGAGAGCATTCGATTGGGGTATCAAGATTTGGGGGAATTTTATTATG
CCCGTGGTGATTTGGATAATGCCTTGAAGAACTTTGTCCGTACCCGGGAC
TACTGCTCCATGACCCGTCATAGCGTCGATATGTGCCTGAACGTGATCAA
GGTGGCCGTGGGGCTCGACAGCTTCTCGCATGTCAACACCTACGTCACGA
AAGCCGAACATACCCCTGACTTGAACGATCCCAAGGCCCGGCACAAGCTC
AAGGCTGCCGCCGGGCTCGTTCAACTCTCCCAACAGCACTATACGAACGC
TGCACGGAAATTTCTTGAATGTGGGGTTGCGGGGCTGACGAAGGATAAGC
CTAACGATAATGCTCCTGCTCCCTTCGCTCAGGTCCTGGCTGCGGAGGAC
GTGGCGGTGTATGGGGGGTTGTGCGCGTTGGCCTCGCTTGATCGGACGGA
ACTGCGACGACGGGTGGTGGATAACATGGCTTTTAGGGGCTTACTAGATC
TGGTCCCATGGATGCGGGAGCTGATTTATGATTTCTGTGGCTCGAAGTAT
GGGGGCTGCTTGAGGGTCTTGGGTGCGATGAAGGGGGAGTTAATGCTGGA
CTTACATCTAGCACGGCATGTGAGTGTTTTATACCAGCAGATACGCGAGA
GATGCTTCTTGCAGTATTTTTCGCCGTATCTGAGCGTGGACTTGGCGAGG
ATGAGCGAGGCCTTTGGTGCGCCGGTGGGGGAGATGGAAAAGGAGGTGGC
CAAATTGATCCGGAGTAATCGGTTGCCGGCACGTGTGGACAGTCAGAAGA
AGACATTGCACAGGCGTCAGGTGGACCCGAGGGAGGAGGGGTATAAGAAA
GTGTTTGGGATGGGCAAGGATTTCCTGAGGGAGGTGAGGGCGATGCTGTT
GAGAACGAGTTTGGTGGAGCATGGGGTGTGTGTGGATGGAGGAGGAGTGG
GAGGGAGGGAGGGAGGAAGAAGGGGGTTTCTGGCTGGTGGGCGTTTGAGC
CAGTCGCATTCGATGGGAATCACGGGGGGCTTTGTGGGTGGGAGAGGGAG
GGGTGGGGGGAGGGAGGGGAGGATGGAAGGGGAGAGTTCGGCGGAGGAGG
AGGAGGGAGAGGAGGAGGAGGAGGAGGAGGAGATGATGGAGGGAGGGGAT
GAGCACCATGGGTGTGGGGGGGGGGGGTAG
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protein sequence of NO05G02670.1

>NO05G02670.1-protein ID=NO05G02670.1-protein|Name=NO05G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=596bp
MVKKQERTSRLLSPDALEVCSKTHISQPLPHTTDKYQPQMQAAAPNVEER
DMEVVDANALDAEEGGGEGAHSASSSAAPAAQTCSTNNTSSSRCGSDDID
APNFDLEAYAARYVGPTKVRRLLFIAPRCKGRELDAYRLALDTLKERGSM
NVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRT
SLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLN
VIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHY
TNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLD
RTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGEL
MLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEK
EVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRA
MLLRTSLVEHGVCVDGGGVGGREGGRRGFLAGGRLSQSHSMGITGGFVGG
RGRGGGREGRMEGESSAEEEEGEEEEEEEEMMEGGDEHHGCGGGG*
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Synonyms
Publications