NO05G00650, NO05G00650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00650 vs. NCBI_GenBank
Match: XP_009821437.1 (hypothetical protein H257_00439 [Aphanomyces astaci] >ETV89037.1 hypothetical protein H257_00439 [Aphanomyces astaci]) HSP 1 Score: 124.8 bits (312), Expect = 1.500e-24 Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 0 Query: 383 PGAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKKTDAS 485 PG PIQT G+ GP G NLFVFH+P++ +N D FN F +G +IS RIMVEK +GRSRGFGFVS+ N +AD AI+ ++G+Q+G KRLKVQHKK S Sbjct: 155 PGPPIQTTESGQ----GPPGCNLFVFHIPNDMTNQDLFNYFQTFGNVISARIMVEKESGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKGS 252
BLAST of NO05G00650 vs. NCBI_GenBank
Match: XP_002903339.1 (CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans T30-4] >EEY55763.1 CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans T30-4]) HSP 1 Score: 123.6 bits (309), Expect = 3.300e-24 Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 0 Query: 383 PGAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKK 481 PG PIQT G+ GP G NLFVFH+P++ +N D FN F+ +G +IS RIMVEK TGRSRGFGFVS+ N +A+ AI+ ++G+Q+G KRLKVQHKK Sbjct: 128 PGPPIQTTESGQ----GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKK 221
BLAST of NO05G00650 vs. NCBI_GenBank
Match: XP_002903343.1 (CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans T30-4] >EEY55767.1 CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans T30-4]) HSP 1 Score: 123.6 bits (309), Expect = 3.300e-24 Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 0 Query: 383 PGAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKK 481 PG PIQT G+ GP G NLFVFH+P++ +N D FN F+ +G +IS RIMVEK TGRSRGFGFVS+ N +A+ AI+ ++G+Q+G KRLKVQHKK Sbjct: 133 PGPPIQTTESGQ----GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKK 226
BLAST of NO05G00650 vs. NCBI_GenBank
Match: OQR99555.1 (UDP-3-O-,3-hydroxymyristoyl glucosamine N-acyltransferase [Thraustotheca clavata]) HSP 1 Score: 123.6 bits (309), Expect = 3.300e-24 Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 0 Query: 383 PGAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKK 481 PG PIQT G+ GP G NLFVFH+P++ +N D F F+A+G +IS RIMVEK TGRSRGFGFVS+ +AD AI+ ++GYQ+G KRLKVQHKK Sbjct: 379 PGPPIQTTESGQ----GPPGCNLFVFHIPNDMTNQDLFTYFAAFGNVISARIMVEKETGRSRGFGFVSYDIPSSADAAIKAMNGYQVGRKRLKVQHKK 472
BLAST of NO05G00650 vs. NCBI_GenBank
Match: CBJ27614.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 122.9 bits (307), Expect = 5.600e-24 Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 0 Query: 373 AGPEGYP-PWSPGAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKK 481 AG GY +PG PIQT GP+G NLFVFH+P+ +N F +FS +G +IS RIMVEK TGRSRGFGFVS+ N+++A+ AI ++GYQ+ HKRLKVQHKK Sbjct: 134 AGQGGYARSTNPGQPIQTTTN----LQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKK 238
BLAST of NO05G00650 vs. NCBI_GenBank
Match: GAX95356.1 (CUG-BP- and ETR-3-like factor, putative [Pythium insidiosum]) HSP 1 Score: 122.9 bits (307), Expect = 5.600e-24 Identity = 58/95 (61.05%), Postives = 72/95 (75.79%), Query Frame = 0 Query: 386 PIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKK 481 PIQT G+ GP G NLFVFH+P++ +N D FN F+ YG +IS RIMVEK TGRSRGFGFVS+ N +AD AI+ ++G+Q+G KRLKVQHKK Sbjct: 141 PIQTTESGQ----GPPGCNLFVFHIPNDMTNQDLFNYFAPYGNVISARIMVEKETGRSRGFGFVSYDNAASADQAIKAMNGFQVGRKRLKVQHKK 231
BLAST of NO05G00650 vs. NCBI_GenBank
Match: EWM28135.1 (RNA binding protein [Nannochloropsis gaditana]) HSP 1 Score: 122.5 bits (306), Expect = 7.300e-24 Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 0 Query: 364 VFSEAALACAGPEGYPPWSPGAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKKTDAS 485 V+S+ + G P +PGAPI+T + GPEG NLFVFH+P++ +N D + MFS +G +IS RIMV+K TGRSRGFGFVS++N ++A AI+ ++G+ +GHKRLKV+ KK AS Sbjct: 315 VYSKYGIVTNGGYPSPLKTPGAPIKTTDSDK----GPEGCNLFVFHIPNDMTNLDLYQMFSTFGQVISARIMVDKVTGRSRGFGFVSYNNHDSALQAIKAMNGFVVGHKRLKVEQKKDKAS 431
BLAST of NO05G00650 vs. NCBI_GenBank
Match: ETK92521.1 (hypothetical protein L915_04208 [Phytophthora parasitica] >ETL45930.1 hypothetical protein L916_04162 [Phytophthora parasitica] >ETM47942.1 hypothetical protein L914_07471 [Phytophthora parasitica] >ETP22503.1 hypothetical protein F441_04299 [Phytophthora parasitica CJ01A1] >ETP50385.1 hypothetical protein F442_04320 [Phytophthora parasitica P10297] >KUF80411.1 CUGBP Elav family member 2 [Phytophthora nicotianae] >KUG00428.1 CUGBP Elav family member 2 [Phytophthora nicotianae]) HSP 1 Score: 121.3 bits (303), Expect = 1.600e-23 Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 0 Query: 384 GAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKK 481 G PIQT G+ GP G NLFVFH+P++ +N D FN F+ +G +IS RIMVEK TGRSRGFGFVS+ N +A+ AI+ ++G+Q+G KRLKVQHKK Sbjct: 134 GPPIQTTESGQ----GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKK 226
BLAST of NO05G00650 vs. NCBI_GenBank
Match: KUF97331.1 (hypothetical protein AM588_10011703 [Phytophthora nicotianae]) HSP 1 Score: 121.3 bits (303), Expect = 1.600e-23 Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 0 Query: 384 GAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKK 481 G PIQT G+ GP G NLFVFH+P++ +N D FN F+ +G +IS RIMVEK TGRSRGFGFVS+ N +A+ AI+ ++G+Q+G KRLKVQHKK Sbjct: 120 GPPIQTTESGQ----GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKK 212
BLAST of NO05G00650 vs. NCBI_GenBank
Match: POM59581.1 (CUG-BP- and ETR-3-like factor [Phytophthora palmivora var. palmivora]) HSP 1 Score: 121.3 bits (303), Expect = 1.600e-23 Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 0 Query: 384 GAPIQTVREGEVVTSGPEGSNLFVFHLPSNYSNADCFNMFSAYGTIISVRIMVEKGTGRSRGFGFVSFSNQEAADLAIRMLDGYQLGHKRLKVQHKK 481 G PIQT G+ GP G NLFVFH+P++ +N D FN F+ +G +IS RIMVEK TGRSRGFGFVS+ N +A+ AI+ ++G+Q+G KRLKVQHKK Sbjct: 133 GPPIQTTESGQ----GPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKK 225 The following BLAST results are available for this feature:
BLAST of NO05G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00650 ID=NO05G00650|Name=NO05G00650|organism=Nannochloropsis oceanica|type=gene|length=3609bpback to top protein sequence of NO05G00650.1 >NO05G00650.1-protein ID=NO05G00650.1-protein|Name=NO05G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=964bpback to top Synonyms
Publications
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