NO05G00520, NO05G00520 (gene) Nannochloropsis oceanica

Overview
NameNO05G00520
Unique NameNO05G00520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4288
Alignment locationchr5:184637..188924 -

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Properties
Property NameValue
DescriptionFMN binding
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:184637..188924 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019595DUF2470
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
BLAST of NO05G00520 vs. NCBI_GenBank
Match: PRW33011.1 (FMN-binding split barrel isoform A [Chlorella sorokiniana])

HSP 1 Score: 238.4 bits (607), Expect = 3.500e-59
Identity = 127/270 (47.04%), Postives = 175/270 (64.81%), Query Frame = 0
Query:   81 GHSVP-GQAP--QEMDPELVRIQTLLMEHQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAGYPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIGLEVTSAKIVSLDRLGMMVKIESKWGGSKVRLPFTRECTDRKVCKEIIV 348
            GH  P G A   + +DPE++  +    EHQ TAAR++  +EARTLV Y +  GVL T  QA   L GYP+ ++V +A D++GRPIF+FS++S H  D+  +PR S T+ ++ F+G+ DGR++ IG + ++ +  E   A+  YLAKHP  FWV+FGDF FFR+E I A R   GFAR G +  E+Y  A PD   A++ PV  HMN+DH +AT+AMI+HY+G+ V  A I S+DRLGM V  E      K RLPF R  +DRK  KE+I+
Sbjct:  389 GHQAPAGSAANLEAVDPEILAYR----EHQATAARISLPDEARTLVAYGK-FGVLAT--QARGELEGYPSGSVVEYAADDKGRPIFAFSTMSPHTADVKANPRCSVTIMAEPFRGIADGRINLIGRMAQITDETEKAAAKAAYLAKHPNSFWVEFGDFSFFRLEEIVAARLVAGFARAGKITAEEYAEASPDPIYAFSGPVGGHMNEDHADATRAMIKHYVGITVDKALIQSIDRLGMTVVCERGKDALKCRLPFPRPASDRKSIKELIL 651          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: GAX23338.1 (hypothetical protein FisN_27Lh114 [Fistulifera solaris])

HSP 1 Score: 230.3 bits (586), Expect = 9.500e-57
Identity = 126/286 (44.06%), Postives = 177/286 (61.89%), Query Frame = 0
Query:   82 HSVPGQAPQEMDPELVRIQTLLMEHQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAGYPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYI-----GLEVTSAKIVSLDRLGMMVKIESKWGGS------KVRLPFTRECTDRKVCKEIIVEMTQASAGA 357
            H V G    ++ PEL +      +HQ+ A +L  A + RTLV  S G  V+ T S+A      +P  ++VGF+VDEQGRP+F FS +S+H QD++ +P  S TVASK FKG  DGRV+ +G    +   EE  +A+++Y  KHPG FW  FGDF++FRM ++  VR+ GGFAR G +  ++Y  AQPDA  A+   +  HMNDDH+ AT A++Q+ I     G  +T+A+I S+D LGM VK+  +   +      KVR+PF R   DR   K++IVEMTQASA +
Sbjct:   52 HDVGGDPMSQLSPELQKQLMEYQQHQQNAPKLDFATDVRTLVQNSHGFAVMSTFSKAHPE---FPGGSVVGFSVDEQGRPLFCFSGMSSHTQDILANPNCSLTVASKQFKGAADGRVNLMGTATLIKSKEEIEQAQQLYNQKHPGAFWTAFGDFNWFRM-SVEHVRFVGGFARAGTVTADEYAQAQPDAISAFGPHIAEHMNDDHQSATIAIVQNAIPGMKEGPTITAAEITSVDSLGMFVKVTREEAIAFLPEQFKVRVPFPRPAQDRGDVKKLIVEMTQASAAS 333          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: GAX28237.1 (hypothetical protein FisN_27Hh114 [Fistulifera solaris])

HSP 1 Score: 229.6 bits (584), Expect = 1.600e-56
Identity = 124/286 (43.36%), Postives = 177/286 (61.89%), Query Frame = 0
Query:   82 HSVPGQAPQEMDPELVRIQTLLMEHQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAGYPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYI-----GLEVTSAKIVSLDRLGMMVKIESKWGGS------KVRLPFTRECTDRKVCKEIIVEMTQASAGA 357
            H V G    ++ PEL +      +HQ+ A +L  A + RTLV  S G  V+ T S+A      +P  ++VGF+VDEQGRP+F FS +S+H QD++ +P  S T+ASK FKG  DGRV+ +G    +   EE  +A+++Y  KHPG FW  FGDF++FRM ++  VR+ GGFAR G +  ++Y  AQPDA  A+   +  HMNDDH+ AT A++Q+ +     G  +T+A+I S+D LGM VK+  +   +      KVR+PF R   DR   K++IVEMTQASA +
Sbjct:   49 HDVGGDPMSQLSPELQKQLMEYQQHQQNAPKLDFATDVRTLVQNSHGFAVMSTFSKAH---PDFPGGSVVGFSVDEQGRPLFCFSGMSSHTQDILANPHCSLTIASKQFKGAADGRVNLMGTATLIKSKEEIEQAQQLYNQKHPGAFWTAFGDFNWFRM-SVEHVRFVGGFARAGTVTADEYAQAQPDAISAFGPHIAEHMNDDHQSATIAIVQNAVPGMKEGPTITAAEITSVDSLGMFVKVTREEAVAFLPQQFKVRVPFPRPAQDRGDVKKLIVEMTQASAAS 330          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: XP_013902434.1 (hypothetical protein MNEG_4544 [Monoraphidium neglectum] >KIZ03415.1 hypothetical protein MNEG_4544 [Monoraphidium neglectum])

HSP 1 Score: 222.2 bits (565), Expect = 2.600e-54
Identity = 126/275 (45.82%), Postives = 167/275 (60.73%), Query Frame = 0
Query:   84 VPGQAPQEMDPELVRIQTLLMEHQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAGYPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIGLEVTSAKIVSLDRLGMMVKIESKWG--GSKVRLPFTRECTDRKVCKEIIVEMTQASAGA 357
            VP     E D E+ R Q    EHQ+TAAR T A+EARTL   ++   VL T S A++   G+P  ++V FAVD +GRPI + S++S H  DLI D R S TV +  F+ L D R +  G   ++P+ E     RE +LAK+P  F+VDFGDF +FR+E I   R+ GGF R   +  EDY AA+PD    +A PV  HMN DHE    AM++HY GL    AK++ LDRLG  +++  + G    KVRLPF R   DRK  K++IVEMT+A+ GA
Sbjct:   15 VPQVYSAEPDAEIARFQ----EHQRTAARPTVADEARTLFSLARS-AVLSTKS-AAAAFDGFPFGSVVEFAVDAEGRPILATSTLSPHTGDLIADGRCSLTVTAPGFQSLQDARFTLAGKAVQLPDSERAA-VRETFLAKYPSAFYVDFGDFRWFRLEEIKGGRFIGGFGRIATISAEDYQAAKPDPISQFAGPVCGHMNADHEGDILAMVKHYTGLSAVKAKMLDLDRLGFNLQVTQQEGEQSFKVRLPFVRPAEDRKAVKDVIVEMTRAARGA 282          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: XP_001700036.1 (predicted protein [Chlamydomonas reinhardtii] >PNW86848.1 hypothetical protein CHLRE_02g098250v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 215.7 bits (548), Expect = 2.400e-52
Identity = 126/276 (45.65%), Postives = 173/276 (62.68%), Query Frame = 0
Query:   84 VPGQ--APQEMDPELVRIQTLLMEHQKTAARLTAAEEARTLVYYSQGL-GVLGTNSQASSPLAGYPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIGLEVTSAKIVSLDRLGMMVKIESKWGGSKVRLPFTRECTDRKVCKEIIVEMTQASAGA 357
            VP Q  A  + DP +   Q    + Q  A R +AAEEART++   QG  GVL T S A     G+PAS++V FA D  GRP FS S++S H QD++ D R S TV S +F+G+D GR++  G ++ VPE ++  + RE++L K+P  F+VDFGDF +FRM TI A R+NGGF R   L  ++YLAA+PD    ++ PV  HMN DH E  KAMI+HY G++V +  ++ LDRLG+   ++      K+RLPF     DRK  K+ IVEMT+ + GA
Sbjct:   57 VPSQFVAGGDGDPVMAAFQ----QQQAHAPRPSAAEEARTVL--DQGTHGVLCTLSSADD-TKGFPASSVVEFACDGSGRPFFSTSTLSAHTQDMVADGRVSLTVKSPNFQGMDCGRLTLQGVVEPVPEADK-ARLREIFLKKYPSAFYVDFGDFKWFRMTTIKAARFNGGFGRAPKLTVDEYLAAKPDPVYPFSRPVCGHMNADHLEDGKAMIKHYCGIDVDAFTMLDLDRLGINCSVKRNGETFKLRLPFPHPVEDRKAIKDAIVEMTKKAKGA 324          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: XP_002509354.1 (predicted protein, partial [Micromonas commoda] >ACO70612.1 predicted protein, partial [Micromonas commoda])

HSP 1 Score: 213.8 bits (543), Expect = 9.200e-52
Identity = 113/249 (45.38%), Postives = 150/249 (60.24%), Query Frame = 0
Query:  106 HQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAG-YPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIGLEVTSAKIVSLDRLGMMVKIESKWGGSKVRLPFTRECTDRKVCKEIIVEMTQAS 354
            HQ TAA+L+ A+E RTLV     LG  G  S  +    G YP  ++VGFA D+ GRPIF+ SS+S H  DL  + + S TV +  F G  D RV+  G +  + + ++   ARE YLAKHP  FWVDFGDF + RM+ I   R  GGFAR G +  E+Y A  PD    ++ P+ SHMN DH ++  AM+ HY+GL V  A I SLD +GM +K+       K+RLPFT    DRK  KE++V MT+A+
Sbjct:    1 HQSTAAKLSFADECRTLV----DLGRYGVISTFAREHGGEYPTGSIVGFASDDDGRPIFALSSMSGHTGDLKANGKCSLTVTAPGFTGAADARVTITGTVAPITDADDQKAARETYLAKHPDAFWVDFGDFSWHRMDGILGARLVGGFARAGGVSGEEYAAGAPDPVAGFSAPIASHMNADHVDSLVAMVGHYVGLTVEDAAIASLDAIGMNMKVTRGGESFKIRLPFTEPARDRKAVKEVLVGMTKAA 245          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: OEU16467.1 (hypothetical protein FRACYDRAFT_269010 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 213.0 bits (541), Expect = 1.600e-51
Identity = 129/320 (40.31%), Postives = 185/320 (57.81%), Query Frame = 0
Query:   54 TSTITSPSSSFRLFSTSDSKKTEEKGGGHSVPGQAPQEMDPELVRIQTLLMEHQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAGYPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIGL-----EVTSAKIVSLDRLGMMV----------KIESKWGGSKVRLPFT-RECTDRKVCKEIIVEMTQASAGAR 358
            TST T+  S       + + K +  GG +++      + D    R+   ++ HQ    ++    + R+LV Y+ G  V+ TNS+ +    G+P  ++VGFAVDE+GRP+F FS +S+H  D++KDP+ S T+A K+FKG  DGRV+ +G   ++ + EE  K RE+YL KHPG FWV+FGDF F+RME I A+R+ GGFAR G++ PEDY  A PD   A+   + SHMNDDH  AT AM+ HYI        V  A I  +D +GM +          ++  +    KVRLPF     ++R   K  IV+MTQ SA A+
Sbjct:   32 TSTATARGSP---LYHAPAPKHDVSGGRNAMDELTQDQKD----RVNAFVI-HQDGVPKIGFPADVRSLVQYNHGFAVMSTNSKLN---PGFPGGSVVGFAVDEEGRPLFVFSGMSSHTTDILKDPKCSLTIADKNFKGAADGRVNLMGTSSRIKDEEEIEKIREIYLKKHPGAFWVNFGDFFFYRME-IEAIRFVGGFARAGSVSPEDYKNASPDPIMAFGAAIASHMNDDHSSATIAMVNHYIPSLAGDGYVQEAMINRVDAMGMDIMITRDPENNDRLPGQTQQFKVRLPFPGGAISERGGVKTAIVQMTQESASAQ 339          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: XP_009039901.1 (hypothetical protein AURANDRAFT_4415, partial [Aureococcus anophagefferens] >EGB05353.1 hypothetical protein AURANDRAFT_4415, partial [Aureococcus anophagefferens])

HSP 1 Score: 209.5 bits (532), Expect = 1.700e-50
Identity = 108/249 (43.37%), Postives = 153/249 (61.45%), Query Frame = 0
Query:  103 LMEHQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAGYPASAMVGFAVDEQ-GRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIG-LEVTSAKIVSLDRLGMMVKIESKWGGSK--VRLPFTRECTDRKVCKEIIV 348
            + EHQ+   RLT AEE R++     G   + T      P  G+P+ +MVGFA++E+ GRPIF F+S+S H ++L+KD R S TV    F+G  D R  F G++  + + +E   AR+ YLA HPG FW +FGDF  +RM+ I  V + GGFAR G +  ++Y+ A  D C A+A PVM+HMNDDH  + K  ++  +G   V SA++  LDR GM V+IE +  GSK  +R+PF    T+RK  K+ IV
Sbjct:    1 IREHQEGCPRLTWAEEIRSIAAQPAGFACMSTLQAGDGPTGGFPSGSMVGFAIEEESGRPIFCFASMSGHTKNLVKDARCSLTVTESAFEGAADARAVFTGEVNVIKDKDEDAAARQTYLASHPGAFWANFGDFKMYRMDEILDVSFVGGFARAGGVTVDEYMEASVDPCLAFAAPVMAHMNDDHASSLKQYVEVLVGAAPVKSAEMKRLDRFGMDVRIEDEATGSKGVLRVPFPEPVTERKKIKDAIV 249          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: GAX84646.1 (hypothetical protein CEUSTIGMA_g12067.t1 [Chlamydomonas eustigma])

HSP 1 Score: 209.5 bits (532), Expect = 1.700e-50
Identity = 118/272 (43.38%), Postives = 169/272 (62.13%), Query Frame = 0
Query:   83 SVPGQAPQEMDPELVRIQTLLMEHQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAGYPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIGLEVTSAKIVSLDRLGMMVKIESKWGGSKVRLPFTRECTDRKVCKEIIVEMTQASA 355
            +VP       DPE++  Q    +HQKTAAR + AE+ART++  ++  GVL T S       G P  ++V FAVD  G PIF+ SS+S+H +DL +D R S TV +  F+G+ D R +  G +++V E E+    R+ +L K+P  FWVDF DF +F M+ IA  RYNGGFA    L PE+Y +A+ D    ++ PV SHMN DH++  KAMI+HY+G++V    ++ LDRLG+   ++ K    K+RLP+ +   DRK  KE IV MT+A+A
Sbjct:   41 TVPEVYTTSEDPEVLAFQ----QHQKTAARPSPAEDARTMMGLAR-FGVLSTVS-VREDARGLPLGSVVEFAVDGSGSPIFAVSSLSSHTRDLKEDGRASLTVMAPGFQGVKDSRFTLQGRVRQV-EDEDKGPLRQAFLTKYPDAFWVDFQDFKWFIMDEIAVGRYNGGFAMAKKLTPEEYSSARMDPVSPFSVPVCSHMNFDHKDDMKAMIRHYVGMQVEDVTMLDLDRLGINFDVKFKDQAFKLRLPYPQPVEDRKAIKEAIVTMTRAAA 305          
BLAST of NO05G00520 vs. NCBI_GenBank
Match: XP_001420255.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO98548.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 208.0 bits (528), Expect = 5.100e-50
Identity = 106/255 (41.57%), Postives = 160/255 (62.75%), Query Frame = 0
Query:  103 LMEHQKTAARLTAAEEARTLVYYSQGLGVLGT-NSQASSPLAGYPASAMVGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSFIGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNGGFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIGLEVTSAKIVSLDRLGMMVKIESKWGGSKVRLPFTRECTDRKVCKEIIVEMTQASAGA 357
            L  H+  AARL+ AEEAR ++  + G G L T  +Q +  LAG+P  ++  +A DE G PIF+ S++S H +D  ++ + + TV   +F+ + DGRVS  G + +V  GE T +AR  YLA+HPG FWVDFGDF +++M  + A+R  GGFAR G++  E+Y  A+PD   A++ PV  HMN DH ++ + +++HY+G++V S ++ S+D LGM  ++         RLPF    T RK  K+ IV MT+ +A A
Sbjct:   19 LARHESRAARLSFAEEAR-VILDTNGCGALSTLGNQRAGVLAGFPCGSVAAYASDEDGLPIFALSALSQHARDARENGKATLTVTRAEFEDVSDGRVSMSGILTEVDAGEATARARARYLARHPGAFWVDFGDFAWYKMTEVVAIRIVGGFARAGSVTVEEYANARPDPVAAFSAPVCGHMNADHGDSLRDVVKHYVGVDVDSVEMRSIDALGMNCRVVKDGEKYACRLPFESAATGRKEVKDQIVLMTRNAAAA 272          
The following BLAST results are available for this feature:
BLAST of NO05G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PRW33011.13.500e-5947.04FMN-binding split barrel isoform A [Chlorella soro... [more]
GAX23338.19.500e-5744.06hypothetical protein FisN_27Lh114 [Fistulifera sol... [more]
GAX28237.11.600e-5643.36hypothetical protein FisN_27Hh114 [Fistulifera sol... [more]
XP_013902434.12.600e-5445.82hypothetical protein MNEG_4544 [Monoraphidium negl... [more]
XP_001700036.12.400e-5245.65predicted protein [Chlamydomonas reinhardtii] >PNW... [more]
XP_002509354.19.200e-5245.38predicted protein, partial [Micromonas commoda] >A... [more]
OEU16467.11.600e-5140.31hypothetical protein FRACYDRAFT_269010 [Fragilario... [more]
XP_009039901.11.700e-5043.37hypothetical protein AURANDRAFT_4415, partial [Aur... [more]
GAX84646.11.700e-5043.38hypothetical protein CEUSTIGMA_g12067.t1 [Chlamydo... [more]
XP_001420255.15.100e-5041.57predicted protein [Ostreococcus lucimarinus CCE990... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003830NSK003830Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00520.1NO05G00520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|664010gene_2845Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100109g14gene2245Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00520.1NO05G00520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00520 ID=NO05G00520|Name=NO05G00520|organism=Nannochloropsis oceanica|type=gene|length=4288bp
TACCACAGAAATCCATTTCTTCTTTCGAAAAATTAATTGGCTCTTTTCTT
TGGGAAAATGGTTAGCTACATGTACCAGATCCTAACTATACAAAAGGATG
TGTGCTTTTTCCTCGTCCTCCCCCTCTTCCTGTTCCTCCGGGCTAACGCT
GGATCCTGTCAAAACCATTTAAAAATCGGCCAAAAATAAGGGAAGAATAT
GCAACAACGTATTGTCAGAAGGCCTTGTCTCGTGTGTAATCCTAAGAGGA
GGCACGCTTATGCAAACATTAGTCTGCGGATAGGTTGCACAAATTCAGGA
TTGTATGGAACTACAGAAAAAGAAATTAATGCAGGGAGCTCCCCACTGTC
CGGGTCTTAAACGCCCTCCTCTTGTTCTGCGCCTCAACCTTGAGCCTCTT
GGTCACCTCCCGAGCCTGCCGTCGCTTCTTCCTCTCTTCCTCCTCCCTCT
CCTCTTCGTCCTCCTTGTTATCTGCTCCCCGTCCTCCTCCCTCCCACTCC
GCCCTCTTCTTCCTCCGCTTATTCACCAAGGCCCTCCTCCGTTCTGCCCG
CTCCTGGGCCGCCTTGGCCGCATACGGGTTATTGTCCCCCCCCGTACTCT
TAATCGACAGGCGGACATCCATCCCATGCAGGCCAAAATCGTCTTGTAAG
CGATTCCTTAAAAATTTGACATAGCTATCTTCCACCTCTGCCCTGTTTGC
AACCAATGCAAAGGTAGGTGGGCGTGTCTTAACCTGAGCCATGTACTTCA
GTTTGACGGTCTTCCGGGTCGTGGCCGTTAGCGGGGGAGAACGCAAACGT
TGGGTTTCGAGCAGCCAGCGGTTCAGCAAGCCTGTGCTCACCCGCGTGTT
CCAGGCTTGGTACGCCCGCAGGATGGCCGGTAGTAGACTACCCACCCCTT
GACCATTTAGCGCTGATGTGGCCACGACGGGTAAGGACCCCAGTTGGGGC
GAGAGGAGCTTCAGTTGCTCGCGGACGTTCTCTGCGAAGACACGGGGGGA
GGTTAAGAGGAGGTCGGATTTGTTCGCTGCCACGACAAGGGCTCGTCCTT
CCTTGAAAGCACGGGAGGCGATCACCTGCTCTTGCCGACGAAGGCGGAGC
TGCTGTCCGTCCAGGACGAGGACGACGACGTTAGCGTAACGGACGGCGCG
GAGGGCTTCCGTTACTGAGAGGTGTTCGAGGACGTTGGAGTGGTCTTGGC
GGCCGGTTTTACGGATCCCAGCCGTGTCGACTAGGCGAAGACGATGATTT
CGGTAAGAGTAGTCCACTAGGACGACGTCGCGAGTGGTACCGGCGATGGA
GGAGGTAATGAGGCGCGGATAGGCGGACGATGCTGTTGCTGCTGCTTGAT
CGAGGTTTCCTTCCTCATCATCGTCTTCAGGGTGCCGGTGGTGAGAAGGG
TGGGCTCGAGGGCGTTTGTTGAGCGTTGCATTGACGAGGCTTGATTTTCC
CACGTTTGGTAACCCCACAAAGGCAACGGTGATCACGTCCTCCTTCCCTC
CCTCCTCCTCGTCCTCCCCCTCTTCTCCCCCCTCCCCTTCCCTTTGTTCG
TTATTATCCATTTCCCTCCCATTCTCCTTTCTGCTTCCACTCCCTACACT
GCTACTGCTGCTGCTACTACTACCTCCACTCCCGAAGCCCAGTACCTTCG
CCCTCTCCACCAAGACAGACGCCAAATCCGATATCCCCTCGTTATGTGCC
GCCGACACCGCCACCGGATCCCCTAGCCCAAATTCATAGGCGTCATATAT
AGCAGTTTGCATCTCGGAGGACAATACTCCTCCTTCTGCCTTGTTAGCCA
CAAGCAACGTCTTGTCCCGGACTCCCATCCGGTGCAACCATCTCGCTAAA
TGCGCTTCTTCAGGCCCGACCCCTCCTCTTGTATCCAGGATGAACAAAAC
AGCATCGCTCTCCTGCAATGCCTGAACTACTTGAGCGTTTATCAGATCCT
GTAATAACTTCCTTTGCTCCCGTGCTCTTTGCCTCTTCAGTCCTCGCGGA
TCGTCCTCGTCCTCCTCCTCGACTGTTTCCTCCGTCTCGTCCATTCCCAG
CTCATCCTCCTCCACAAGCCCCCCCGTGTCCGTCACAATCATTGAAAAGC
CTCCAAAAGAACATGGGCCTGTTTTCCGATCACGTGTAGTGCCGGGAATG
GGGGTCACCAGCGCACTTCCCCCTGTCCATTGCCCTTTCGCATTACCAGT
TAGACGATTGAAGAGCGTGGATTTACCCACGTTAGGACGTCCGATCAGGG
CAATGCGGAAGGGCCGTGAATGTGGCACTTCTGATGATTTGCTGCTACCG
TTCGTGGTGGTAAAGTGGGTGCGGTGGTGGAGGGGGATGGTGGTGGAGGA
GAAGGAGGGCAGGAATAGGGGGTGGGGAGGTCGGCTGCGGTGTGCCGGTC
TCGACCCACGACGACAAACCAAGGACAGGGAGGACATGCGGTAGGCCAGC
ATAACGACGACGCGCTCCTACTGCAACTGCTTCCCCTTCCTGTTGGTGCC
TATGGGCGAGTGATTTTATGGTGAGATGTATTAGTTGTTGAGCTGATCTC
GCCTCCTCGCTCTAACGTTCCATTTCCTTGCATCGTCAGACAAAAATGTC
ATCCTGACATTACACTCCACACACTACACCTTAACACCAACGCTGTCTCC
CTTTCTCCCTTCTTCAACCAACAAACAGCCTTCATGACGCGCGTTTTCCG
CCGGGCCTTGGGCACTACCCTCGTTGTCTTGTCATCGTCGAGCCCGGTCT
CAGCCTTCTTGTACGGCGCTGGCCCTGCAGCAGCAGCAGCAGCAGACAGC
AGCGgtaagtttctatctggaaagcggcacgaggccgaatgagaatggtg
tagggaatgtgaatattaaagacgccgcgactgcctgtcttctttttccg
cgcggcttggaccactggccctccctatcccgcacccggcgcgataaacg
atgacgcataaaccaatccgcctcacttagactccttcccatactttcat
gacagTCCTCCGTCGTCGCACGCACGCCATCTCTTTCTCCCCCACCTCCA
CCATCACCTCCCCCTCCTCCTCTTTCCGCCTCTTCAGCACCAGCGACAGC
AAAAAGACTGAGGAAAAAGGCGGCGGGCATAGCGTGCCGGGCCAAGCCCC
CCAAGAGATGGACCCCGAGCTTGTCCGCATCCAGACCCTCCTGATGGAGC
ACCAGAAAACTGCCGCACGCCTGACAGCGGCGGAAGAGGCCCGAACTCTT
GTCTATTATTCGCAGGGTCTGGGGGTGTTGGGCACGAACTCCCAGGCGTC
GTCCCCGTTGGCGGGTTACCCGGCTTCGGCCATGGTGGGCTTTGCGGTGG
ATGAGCAGGGACGGCCGATTTTTTCTTTTTCAAGCATTTCAACGCACAAG
CAGGATTTGATCAAGGACCCGCGGGGAAGTTTCACGGTCGCAAGCAAGgt
gcggattgcagatgtttctcgatttgttcagtttattattatttattaaa
gtaggcgctgaaactacctttttatgcattcgattttcctttgacactca
cctttttcccgctccccgtcccccttcccccagGACTTCAAGGGGTTGGA
CGACGGCCGCGTGTCCTTCATCGGGGACATCAAAAAAGTGCCCGAGGGGG
AGGAGACGACCAAGGCGCGAGAGATGTACCTGGCTAAGCACCCGGGGCAC
TTCTGGGTCGATTTTGgtacgtttttttgaagaggtatatatgtatgctt
tgtgtgttttcccttgaaataggaactactatgtattaatttattcctgt
ttcgtttttatttgtgatccaattacagGTGATTTTGATTTCTTCCGCAT
GGAGACCATTGCCGCGGTCCGTTACAACGGCGGTTTCGCCCGTTTCGGCG
CCCTTGAGCCCGAAGACTACTTGGCCGCTCAGCCTGATGCTTGCCAGGCG
TATGCCACCCCCGTGATGTCGCACATGAACGACGATCACGAGGAGGCCAC
CAAGGCGATGATCCAGCATTACATCGGTTTGGAGGTGACGAGTGCGAAGA
TCGTGAGCCTGGATCGGCTGGGGATGATGGTTAAGATTGAGAGTAAATGG
GGGGGGAGCAAGGTGCGGCTACCGTTTACGCGGGAATGCACGGACCGAAA
GGTCTGTAAAGAGATCATTGTGGAGATGACTCAGGCGTCGGCGGGGGCCA
GGGTGGGGGGGAAGGAGAAGGGGGAAGAGAAGGAGGAGAAGAAGTAGCGA
AGAGGGATTGATGAAGGGAGGGAAGGAAAGAGGGATGG
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protein sequence of NO05G00520.1

>NO05G00520.1-protein ID=NO05G00520.1-protein|Name=NO05G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MTRVFRRALGTTLVVLSSSSPVSAFLYGAGPAAAAAADSSVLRRRTHAIS
FSPTSTITSPSSSFRLFSTSDSKKTEEKGGGHSVPGQAPQEMDPELVRIQ
TLLMEHQKTAARLTAAEEARTLVYYSQGLGVLGTNSQASSPLAGYPASAM
VGFAVDEQGRPIFSFSSISTHKQDLIKDPRGSFTVASKDFKGLDDGRVSF
IGDIKKVPEGEETTKAREMYLAKHPGHFWVDFGDFDFFRMETIAAVRYNG
GFARFGALEPEDYLAAQPDACQAYATPVMSHMNDDHEEATKAMIQHYIGL
EVTSAKIVSLDRLGMMVKIESKWGGSKVRLPFTRECTDRKVCKEIIVEMT
QASAGARVGGKEKGEEKEEKK*
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Synonyms
Publications