NO04G04100, NO04G04100 (gene) Nannochloropsis oceanica

Overview
NameNO04G04100
Unique NameNO04G04100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3551
Alignment locationchr4:1113940..1117490 -

Link to JBrowse

Properties
Property NameValue
Description2 peptidase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1113940..1117490 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004252serine-type endopeptidase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR009003Trypsin-like_Pept_dom
IPR001478PDZ
IPR001940Peptidase_S1C
Homology
BLAST of NO04G04100 vs. NCBI_GenBank
Match: EWM28714.1 (2 peptidase [Nannochloropsis gaditana])

HSP 1 Score: 526.2 bits (1354), Expect = 2.300e-145
Identity = 492/974 (50.51%), Postives = 552/974 (56.67%), Query Frame = 0
Query:   45 VGAFVSRSDL--GFKSRQPSASPSKRPLIAATALPTTLSPHRARLAPLSAGMWRFDKELTQPQSQENGDDSGFDPPGKGIFRFVWGLLKKRTVQAIGITAFALSAVKNGGGGRKAAGGKVGILDGGGAANAPERYVRSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAECPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLAPEINKEGGKEARSPW--TPFKNWRSKERG-----AREGEKVVLRQEQQEQQPRKDREEAVGEGITLNRGTAKKDEGAPATDDSKQ----------------------GEQRENVQDRINXXXXXXXXXXXXXXXXXXXXXXXXXXTVPFDERESALLEDGEAFLARRGTTQPGQAATSGSRATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPSVVPRPDSGVSSPSTTKLSIPPSLHPSRPGGSSSFVSGVFRAIAPAVPRVDCVKVYKGEIKFASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI----------------------LPPSPLPRPRDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLNQKAAARQRQIQVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGMERGRSAFSEILRKAQQAGKHLLQ-QPPQNHYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXIHFIPEGGAVVVVNVLEDSPAQQAGLQHLDILLEIDRCPIYKVEDAQRIIHASGVGRDIEIKVLRSTQEVTVQVRTTDFLTLFRKQQTAKRYPELKPKVERKREGLNEGGREQLEREGDGEELEESPLGGKGG 965
            VG FV    +  G + R+   S S+        LP+T++   AR   LSAG+WRFD+E  QP   E  ++ GFDPPGKG+ R VW +L++R+VQ +G+   ALS  +N G  RK +G   GIL G G  NAPERYVRSKD               XXXXXXXXX                  AE P L                                                  AP   K+ G+E   P   T  +    KE+G     AR G                                 + DEG    ++  +                                  XXXXXXXXXXXXXXXXXXXXXXXXXX  PF+ERE+ LLEDGEAFLARRG    G    +  R                                  P+VVP P  G                         FV GVFRA+APAVPRVDCVKVYKGEIKFASGSGVI++PEGY++TNSLLVRNALELKVTLADGRE+PAE+KGVDEVLDVAV                         +  S   +  DWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGL TS+TVQFSVPIN+LK AVE LA G EV HPSIGVEMMP+TPTLAAQLNQ+A          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GG      A +  LRKAQ AG  L Q Q P +   P       XXXXXXXXXXXXXXXX    I FIPEGGAVVVV+VLEDSPAQ AGL+HLDILLEIDRCPIY V DAQR+IH+SGVGR++EIKVLR+TQEVT+ VRTTDFLTLF+KQQ AK+YPEL+PKV+  R    EGG        DGE      +GG  G
Sbjct:   56 VGGFVHAPGMSDGRRLRRMPLSTSRHS--PGPPLPSTMAIAHARARSLSAGLWRFDREF-QPSPAE--EEDGFDPPGKGLLRLVWNVLRRRSVQVVGVAVLALSFFRN-GLERKGSGKAGGILHGNGVPNAPERYVRSKDPAVTKSQQKSEREKKXXXXXXXXXTER---------------AEQPGLRRGKESSTPFPLAGKPVPLLDSEAPVPAPEGVQEEGSGAVG---------APSSEKDAGEEPLGPGPDTEKRFGAGKEQGLARKEARGGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETDEGRVGKEEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEERETPLLEDGEAFLARRGDVLQGAPVGTEGREV------------------RAQRRGRPRRAEPGPAVVPVP--GXXXXXXXXXXXXXXXXXXXXXXXXXFVGGVFRAVAPAVPRVDCVKVYKGEIKFASGSGVIYSPEGYLMTNSLLVRNALELKVTLADGREYPAEIKGVDEVLDVAVXXXXXXXXXXXXXXXXXXXTFQYAPIGDSESLQVGDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLRTSSTVQFSVPINQLKAAVEALARGREVHHPSIGVEMMPITPTLAAQLNQQA---MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDTGG------ALAHFLRKAQHAGDFLRQWQQPSDRSTP-----LPXXXXXXXXXXXXXXXXPASQIQFIPEGGAVVVVHVLEDSPAQHAGLRHLDILLEIDRCPIYGVGDAQRVIHSSGVGRNLEIKVLRNTQEVTLHVRTTDFLTLFKKQQAAKKYPELRPKVKEGRRVGEEGGWL------DGENARHEQVGGVPG 959          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: XP_005536821.1 (serine protease [Cyanidioschyzon merolae strain 10D] >BAM80785.1 serine protease [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 172.9 bits (437), Expect = 5.000e-39
Identity = 129/465 (27.74%), Postives = 208/465 (44.73%), Query Frame = 0
Query:  500 SSSFVSGVFRAIAPAVPRVDCVKVY--------------------------KGEIKFASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI------LPPSPLP-----RPRDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLNQKAAARQRQIQVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGMERGRSAFSEILRKAQQAGKHLLQQPPQNHYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXIHFIPEGGAVVVVNVLEDSPAQQAGLQHLDILLEIDRCPIYKVEDAQRIIHASGVGRDIEIKVLRST--QEVTVQVRTTDFLTLFRKQQTAKRYPE 926
            SSSFV+   + + PAV R+D  +V                           K   +   GSG   + +G ++TN+ +V  A ++ VTL DGR +P +V G D++LD+AV++I      +P +PL      +  DWV+++G+P     +V LGIVS L +++AEVG P+ +++FIQTDA+ + G  GGPLVNE+GEVVGI++     +  + F++PI+  K  ++ LA G +V HP IG++M+ +TP LA Q NQ   A                                                                                                               +  IPE   V+V+ VL  +PA ++GL+  D++L ++   I    D Q+I+ +S VG++++I+VLR    + + + +RT D +T FR ++  K  PE
Sbjct:  137 SSSFVTKAVKLVGPAVVRIDTERVVQLPADPVLEDPLFRYFFGDEFQRQLPKERTERGQGSGFFISSDGLLLTNAHVVAKASKVTVTLIDGRSYPGKVVGTDDLLDLAVIRIDTHSEKVPTAPLGSSGELQVGDWVIALGNPVGLDNTVTLGIVSSLNRSSAEVGIPDKKINFIQTDAAINPGNSGGPLVNEFGEVVGISTAIRPNAEGIGFAIPIDTAKAVLDMLAKGEKVQHPFIGIQMVTLTPELAKQNNQDPNA---------------------------------------------------------------------------------------------------------------LALIPEVSGVLVLKVLPKTPAAESGLRRFDVILAVNGNAISNARDIQKIVDSSRVGQELKIRVLRGVDGKTIDISIRTAD-MTQFRLEEEKKLSPE 489          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: BAZ25305.1 (2-alkenal reductase [Scytonema sp. NIES-4073])

HSP 1 Score: 170.2 bits (430), Expect = 3.200e-38
Identity = 110/288 (38.19%), Postives = 158/288 (54.86%), Query Frame = 0
Query:  470 VVPRPDSGVSSPSTT------KLSIPPSLHPSRPGGSSSFVSGVFRAIAPAVPRVDCVKV--------YKGEIKF-------------------ASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI----LPPSPLPRPR-----DWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLN 716
            ++ R  S V++PSTT      + + PP+    +  G  SFVS     + PAV R+D  +         Y G+  F                     GSG I  P G ++TN+ +V  A  + VTL DGR+   EVKGVDE  D+AV+KI    LP +PL   +     DW ++VG+P     +V LGI+S L +++A+VG P+ ++ FIQTDA+ + G  GGPLVNE GEV+GIN+     +  + F++PI++ KV  E LA G ++ HP IGV M+ +TP LA Q N
Sbjct:  100 ILKRSLSSVTAPSTTTVETIAETTAPPTAASQQEVGIRSFVSAAVNRVGPAVVRIDTERTVTMRAPDSYFGDPFFREFFGNDLSPRVPQEYHQRGEGSGFIIDPNGMILTNAHVVSGADSVTVTLKDGRKLKGEVKGVDEPSDLAVVKINGKNLPVAPLGNSKDLQVGDWAIAVGNPLGLDNTVTLGIISTLNRSSAQVGIPDKRLDFIQTDAAINPGNSGGPLVNEQGEVIGINTAIRADAQGIGFAIPIDKAKVIEEALASGQKISHPYIGVRMITLTPELAKQSN 387          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: WP_096571286.1 (PDZ domain-containing protein [Scytonema sp. NIES-4073])

HSP 1 Score: 170.2 bits (430), Expect = 3.200e-38
Identity = 110/288 (38.19%), Postives = 158/288 (54.86%), Query Frame = 0
Query:  470 VVPRPDSGVSSPSTT------KLSIPPSLHPSRPGGSSSFVSGVFRAIAPAVPRVDCVKV--------YKGEIKF-------------------ASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI----LPPSPLPRPR-----DWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLN 716
            ++ R  S V++PSTT      + + PP+    +  G  SFVS     + PAV R+D  +         Y G+  F                     GSG I  P G ++TN+ +V  A  + VTL DGR+   EVKGVDE  D+AV+KI    LP +PL   +     DW ++VG+P     +V LGI+S L +++A+VG P+ ++ FIQTDA+ + G  GGPLVNE GEV+GIN+     +  + F++PI++ KV  E LA G ++ HP IGV M+ +TP LA Q N
Sbjct:   44 ILKRSLSSVTAPSTTTVETIAETTAPPTAASQQEVGIRSFVSAAVNRVGPAVVRIDTERTVTMRAPDSYFGDPFFREFFGNDLSPRVPQEYHQRGEGSGFIIDPNGMILTNAHVVSGADSVTVTLKDGRKLKGEVKGVDEPSDLAVVKINGKNLPVAPLGNSKDLQVGDWAIAVGNPLGLDNTVTLGIISTLNRSSAQVGIPDKRLDFIQTDAAINPGNSGGPLVNEQGEVIGINTAIRADAQGIGFAIPIDKAKVIEEALASGQKISHPYIGVRMITLTPELAKQSN 331          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: XP_005705279.1 (serine-type endopeptidase [Galdieria sulphuraria] >EME28759.1 serine-type endopeptidase [Galdieria sulphuraria])

HSP 1 Score: 165.2 bits (417), Expect = 1.000e-36
Identity = 97/254 (38.19%), Postives = 148/254 (58.27%), Query Frame = 0
Query:  500 SSSFVSGVFRAIAPAVPRVDC----------------VKVYKGE----------IKFASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI------LPPSPLPRPR-----DWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLNQ 717
            SSSFV+   +A+ P+V R+D                  K + G+           +   GSG I + +G ++TN+ +V+N  ++ VTL DGR +   VKG D++LD+AV++I      LP +PL         DWV+++G+P     +V LGIVS L ++AAEVG PE ++ FIQTDA+ + G  GGPLVNE+G+VVGIN+     +  + F++PI++ K   + LA G ++ HP IG++M  +TP LA Q N+
Sbjct:  206 SSSFVTEAVKAVGPSVVRIDTERKISTANDPLLEDPFFKKFFGDEFQRQLPRERTERGQGSGFIISKDGLILTNAHVVKNVEKVTVTLTDGRAYVGTVKGTDDLLDLAVIRIDPKGRELPVAPLGNSSELQVGDWVIALGNPVGLDNTVTLGIVSSLNRSAAEVGIPEKKIDFIQTDAAINPGNSGGPLVNEFGQVVGINAAIRANAEGIGFAIPIDKAKAISDALAKGKKIQHPFIGIQMSTITPELAKQNNE 459          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: WP_054466620.1 (PDZ domain-containing protein [Planktothricoides sp. SR001] >KOR36366.1 serine protease [Planktothricoides sp. SR001])

HSP 1 Score: 165.2 bits (417), Expect = 1.000e-36
Identity = 105/280 (37.50%), Postives = 158/280 (56.43%), Query Frame = 0
Query:  474 PDSGVSSP-STTKLSIPPSLHPSRPGGSSSFVSGVFRAIAPAVPRVDCVK--------------------------VYKGEIKFASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKILPPS---PLP--------RPRDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLN 716
            P +  +SP S++ +++ PS  P + G   SFV+     + PAV R+D  +                          V + E++   GSG I   EG ++TN+ +V  A ++ VTL DGR F  EV G+DEV+D+AV+KI P     PL         R  DW ++VG+P     +V LGI+S L++++AE G P+ ++ FIQTDA+ + G  GGPL+NE GEV+GIN+     +N + F++PIN+ K   + LA G EV HP +G++M+ +TP LA Q N
Sbjct:   41 PATASNSPVSSSLVALQPSPAPIQAG---SFVASAVEQVGPAVVRIDTERTVTRQMDPLFEDPFFRRFFGDQMIPQVPQQELQRGQGSGFIIDREGIVLTNAHVVSQADKVTVTLKDGRTFEGEVAGIDEVIDLAVVKINPRGENLPLAKLGDSSNIRVGDWAIAVGNPLGLNNTVTLGIISTLSRSSAEAGIPDKRIDFIQTDAAINPGNSGGPLLNERGEVIGINTAIRADANGIGFAIPINQAKDVKDILAKGGEVPHPYVGIQMVTLTPELAKQNN 317          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: WP_018396556.1 (PDZ domain-containing protein [filamentous cyanobacterium ESFC-1])

HSP 1 Score: 164.5 bits (415), Expect = 1.800e-36
Identity = 129/464 (27.80%), Postives = 200/464 (43.10%), Query Frame = 0
Query:  480 SPSTTKLSIPPSLHPSRPGGSSSFVSGVFRAIAPAVPRVDCVKVYKGEIK-------------------------FASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI------LPPSPLPRPR-----DWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLNQKAAARQRQIQVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGMERGRSAFSEILRKAQQAGKHLLQQPPQNHYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXIHFIPEGGAVVVVNVLEDSPAQQAGLQHLDILLEIDRCPIYKVEDAQRIIHASGVGRDIEIKVLRSTQEVTVQVRT 908
            +P TT L+  P+++      S SFV+       PAV R+D  +    ++                             GSG I    G ++TN+ +V  A ++ VTL DGREFP EV G D V D+AV+KI      LP +PL         DW ++VGSP     +V LGI+S L +++A+ G P+ +V+F+QTDA+ + G  GGPL+NE GEV+GIN+     +  + F++PIN+ K   + LA G EV HP +G++M+ ++P +A + N                                                             +  S IL                                                   +PE   V+V+ VL ++PA++ G++  D++ EID  PI   E+ QR +  SGVG++++ KVLR  +  T+ +RT
Sbjct:   38 APETTTLAQNPAIN------SRSFVAQAVANTGPAVVRLDTERTVANQLSPFFEDPFFRDFFGNMPQQMPQERQVQGQGSGFIIDGGGMILTNAHVVDQADKVTVTLQDGREFPGEVLGTDRVTDLAVVKIRERVPNLPVAPLGDSSQVVVGDWAIAVGSPGGLNNTVTLGIISTLDRSSAKAGIPDKRVNFLQTDAAINPGNSGGPLLNERGEVIGINTAIRANATGIGFAIPINKAKELKDTLAAGREVPHPFVGIQMVDLSPEMAKRNND------------------------------------------------------------NPNSTIL---------------------------------------------------LPEVNGVLVMQVLPNTPAERGGIRRGDVITEIDGKPIATGEEVQRFVENSGVGQNLQFKVLRGDRTTTITIRT 384          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: WP_015192134.1 (PDZ domain-containing protein [Stanieria cyanosphaera] >AFZ34461.1 HtrA2 peptidase [Stanieria cyanosphaera PCC 7437])

HSP 1 Score: 164.1 bits (414), Expect = 2.300e-36
Identity = 99/254 (38.98%), Postives = 146/254 (57.48%), Query Frame = 0
Query:  500 SSSFVSGVFRAIAPAVPRVDCVKVYKGEI---------------KFAS-----------GSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI------LPPSPL-----PRPRDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLNQ 717
            +++FVS       PAV R+D  K     I               +FA+           GSG I  P G ++TN+ +V  A  + VTL DGREF  +V+G DEV D+AV+KI      LP +PL      +  DW ++VG+P     +V LGI+S L++++A+VG P+ +V F+QTDA+ + G  GGPL+NE GEV+GIN+     +N + F++PIN+ K   + LA G +V HP +G++M+ +TP LA Q NQ
Sbjct:   63 ATNFVSSAIAKTGPAVVRIDTEKTVTRRIDPLFEDPFFRDFFGDRFAAPIPEQRQLRGQGSGFIIDPNGIILTNAHVVSQADRVVVTLKDGREFEGKVQGTDEVTDLAVVKIEPKGAALPVAPLGDSTQVQVGDWAIAVGNPIGLNNTVTLGIISTLSRSSAQVGIPDKRVDFLQTDAAINPGNSGGPLLNERGEVIGINTAIRADANGIGFAIPINKAKTLKDTLAAGQQVPHPYVGIQMVSLTPELARQNNQ 316          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: WP_006528205.1 (PDZ domain-containing protein [Gloeocapsa sp. PCC 73106] >ELR98972.1 trypsin-like serine protease with C-terminal PDZ domain [Gloeocapsa sp. PCC 73106])

HSP 1 Score: 163.7 bits (413), Expect = 3.000e-36
Identity = 106/277 (38.27%), Postives = 152/277 (54.87%), Query Frame = 0
Query:  475 DSGVSSPSTTKLSIPPSLHPSRPGGSSSFVSGVFRAIAPAVPRVDCVKVYKGEIKFA------------------------SGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI------LPPSPLP-----RPRDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLNQ 717
            +S ++  ++T +++ PS  P       SFV+       PAV R+D  KV    +  A                         GSG I   EG ++TN+ +V  A  + VTL DGR F  EV+G+DEV D+AV+KI      LP +PL      R  DW ++VG+P     +V LGI+S L++T+A+VG P+ ++ FIQTDA+ + G  GGPL+N  GEV+GIN+     +  + F++PIN+ K     LA G EV HP IGV+M+ +TP LA Q NQ
Sbjct:   41 NSNLTPGASTPVAVAPSNLP------QSFVATAIEQTGPAVVRIDTEKVVSRRLNPALEDPFFQDFFGNQLQQPQRQRMTGQGSGFIVDQEGIILTNAHVVDGADRVLVTLKDGRTFDGEVRGIDEVTDLAVVKITPQGDKLPVAPLGNSDQIRVGDWAIAVGNPVGLNNTVTLGIISTLSRTSAQVGIPDKRIDFIQTDAAINPGNSGGPLLNAQGEVIGINTAIRADAMGIGFAIPINKAKELQNILASGREVPHPYIGVQMVTITPELAKQNNQ 311          
BLAST of NO04G04100 vs. NCBI_GenBank
Match: KOO23479.1 (serine protease [Chrysochromulina sp. CCMP291])

HSP 1 Score: 162.9 bits (411), Expect = 5.200e-36
Identity = 96/253 (37.94%), Postives = 148/253 (58.50%), Query Frame = 0
Query:  490 PSLHPSRPGGSSSFVSGVFRAIAPAVPRVDCVKVYKGE----------------IKFASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKI------LPPSPLPRP-----RDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLN 716
            P+L P R    +SFV+    ++ PAV R+D  ++   +                 +   GSGVI   EG+++TN+ +V+NA ++ VTL DGR F  +VKG D+ +D+A +KI      LP +PL R       DWV+++G+      +V LGIVS L ++AAEVG P  +V+FIQTDA+ + G  GGPL+NE+GEV+GIN+     +  + F++PI+  + A+ EL+ G ++ H  +G+ M  +TP  A Q N
Sbjct:    7 PALPPRRQ--KTSFVTAAVASVGPAVVRIDTERLVDRQPLEGYLFPGLEPDGQRRESGQGSGVIVNEEGFILTNAHVVKNAAKVTVTLTDGRVFEGQVKGQDDYMDLAAVKIKPTGRKLPTAPLGRSDDLQVGDWVIAIGNAVGLDSTVTLGIVSSLQRSAAEVGIPNKKVNFIQTDAAINPGNSGGPLLNEFGEVIGINTAIRANAAGIGFAIPIDTAEKAMRELSQGRKIAHAYLGISMSTLTPDSARQNN 257          
The following BLAST results are available for this feature:
BLAST of NO04G04100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28714.12.300e-14550.512 peptidase [Nannochloropsis gaditana][more]
XP_005536821.15.000e-3927.74serine protease [Cyanidioschyzon merolae strain 10... [more]
BAZ25305.13.200e-3838.192-alkenal reductase [Scytonema sp. NIES-4073][more]
WP_096571286.13.200e-3838.19PDZ domain-containing protein [Scytonema sp. NIES-... [more]
XP_005705279.11.000e-3638.19serine-type endopeptidase [Galdieria sulphuraria] ... [more]
WP_054466620.11.000e-3637.50PDZ domain-containing protein [Planktothricoides s... [more]
WP_018396556.11.800e-3627.80PDZ domain-containing protein [filamentous cyanoba... [more]
WP_015192134.12.300e-3638.98PDZ domain-containing protein [Stanieria cyanospha... [more]
WP_006528205.13.000e-3638.27PDZ domain-containing protein [Gloeocapsa sp. PCC ... [more]
KOO23479.15.200e-3637.94serine protease [Chrysochromulina sp. CCMP291][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009376NSK009376Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04100.1NO04G04100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551929gene_2193Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g142gene1797Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04100.1NO04G04100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04100 ID=NO04G04100|Name=NO04G04100|organism=Nannochloropsis oceanica|type=gene|length=3551bp
ATGACAGCCTTCAGCACCTGTAGTCGCAGGCCCAGGTCACTTCAAGGCCA
AGCGTTGCTCGTCCTCGTCCTCGTCATCATCCTCGCGTTGTGCAGAGGAA
GAAAGACCCTGACGCCGTCAGTGGGGACGAGCGTGGGAGCGTTTGTGAGC
CGTTCAGACTTAGGATTCAAATCTCGCCAGCCATCAGCTTCCCCCTCAAA
GCGCCCGCTCATTGCCGCCACAGCCCTGCCAACTACCCTTTCACCTCATC
GCGCCCGCCTCGCCCCCCTCTCCGCAGGCATGTGGCGTTTCGATAAAGAG
CTGACCCAGCCTCAATCACAAGAGAATGGTGATGATTCGGGGTTTGATCC
GCCGGGAAAGGGAATCTTTCGGTTTGTGTGGGGGTTGCTAAAAAAACGCA
CGGTGCAAGCAATAGGCATAACGGCGTTCGCCCTCAGTGCAGTCAAAAAT
GGGGGCGGAGGAAGGAAAGCAGCGGGGGGAAAGGTTGGAATTCTGGATGG
TGGCGGAGCAGCGAATGCTCCGGAGCGGTATGTGAGAAGTAAGGATCCCG
ACGCCTCATCCAAACAGCAGCAGCGGGAGCAGGAGCAAGAGCAGCCGCAA
AAGCAGGAGCATAAAATAGCGGGAGCTGGAGCAGGAGCAGCATCTAAGTC
AGCTGCTGTGCCCCTGCCAGATGCTGAGTGCCCTATTTTGCCTCCGGACG
ACAGCAGTAGCGGCAGCAGCAGCAAGAAAGGAACTGCGGAAGAGCCAGCA
GTACCTGCAGCAGTACCATCGTCAGAGCAGCAGCAGCATCAGCAGCAGCA
GGACGGGGAAGCGTCAGGTACAGCTGCAGCAGATTCTCTTGCTCCCGAGA
TAAACAAAGAGGGAGGGAAGGAGGCCAGGTCACCTTGGACACCATTTAAG
AACTGGAGGAGCAAAGAGAGGGGGGCGAGGGAGGGAGAGAAGGTTGTACT
GCGGCAGGAGCAGCAGGAGCAGCAGCCACGGAAGGATAGAGAGGAAGCGG
TGGGAGAAGGTATTACACTCAATAGAGGGACAGCGAAAAAAGATGAGGGG
GCACCTGCGACAGATGACAGCAAGCAGGGCGAGCAGAGGGAAAATGTCCA
GGACCGCATCAACCCCGAAGAGGAGGAGGCGGAGGCTGAAGAGGAGGAGG
AGGTGGAGGAGGAGGAGGAGATGGAGGAGGATGGGGATGGCACCGTGCCA
TTTGATGAACGCGAATCTGCCCTTCTGGAGGATGGAGAGGCCTTCCTCGC
ACGCCGTGGGACTACTCAGCCCGGGCAAGCCGCCACCTCCGGTTCCCGTG
CCACCGGCAAGAAGAAGAACGACAACAACGACAAAAACGACAACAAACAA
AGCAAAAGGCAACAGCAGCAGCAAAAGCAGCAGCATGAGAAAAATAAACA
TCCCTCCGTCGTCCCAAGACCCGATTCTGGTGTCTCCTCCCCGTCTACCA
CCAAGCTCTCTATCCCCCCCTCCCTCCATCCCTCCCGGCCGGGGGGCTCC
TCCTCCTTTGTCTCAGGTGTGTTCCGCGCCATCGCCCCCGCCGTTCCGCG
CGTCGACTGCGTGAAAGTTTACAAGGGAGAAATAAAATTCGCCTCCGGTT
CGGGCGTTATTTTCACCCCGGAAGGGTATATGATAACCAATTCTCTTCTT
GTGCGGAACGCGTTGGAGTTGAAGGTGACACTTGCCGACGGTCGAGAATT
TCCCGCCGAGGTGAAGGGGGTGGATGAAGTCCTCGATGTGGCGGTGCTTA
AAATCCTTCCTCCCTCCCCCCTCCCTCGTCCTCgtcctcatcctcgtcct
cgtcctcgtcctcattcccttcctcttttgaatacgcgccaatcggagac
tcggacgccctgcaagtagGCGATTGGGTGCTATCGGTGGGTAGCCCTCG
TTCCCCCGGCCCTTCCGTCATCCTAGGCATTGTTAGTGGCCTCACCAAAA
CAGCTGCAGAAGTGGGTCGGCCCGAGACGCAAGTCTCCTTCATCCAAACA
GACGCGAGTTTCGATGCAGGTGTTGTGGGAGGCCCCCTGGTGAACGAGTA
CGGGGAGGTGGTGGGGATCAATAGCATCGGGCTCACCACCAGCAACACAG
TACAGTTCTCTGTCCCGATCAATGAGTTGAAAGTGGCCGTGGAAGAGCTG
GCTATGGGGAATGAGGTCCTGCATCCATCCATTGGGGTGGAGATGATGCC
CGTCACTCCCACCCTTGCTGCTCAGCTGAACCAGAAGGCAGCGGCAAGAC
AGCGGCAAATCCAGGTTGAGCAGGAGGAGAAGGCAGTGAAAGAGCTTGCG
GAGCAACAGGAGTTGCAACGAAAGGAGCAACAGCAACCGCAGCAGCAGCA
GGCAGAGAAGGGAGGAAAGGGCGCGAGAGGACAAAGAAAAAGAGGTGGAA
TGGAAAGGGGGAGAAGTGCCTTCTCTGAAATTTTGCGCAAAGCTCAACAA
GCAGGCAAGCACCTCCTCCAACAACCTCCACAAAACCACTACCCACCCTC
TCCCTCCCCCTCCCCTTCCCCGCCGTTTTCTCCTTCCACACCCTCCTCCT
CTTCCTCTTCTTCGTCCTCTTCCTCGCAAATCCATTTCATCCCCGAGGGG
GGCGCAGTGGTGGTCGTCAACGTTCTAGAAGATTCCCCTGCCCAACAAGC
AGGCCTGCAGCACTTGGACATTCTGCTTGAGATCGATCGATGCCCCATCT
ACAAGGTGGAAGATGCGCAAAGGATCATCCACGCGTCCGGGGTCGGGAGG
GACATAGAGATAAAGGTACTAAGAAGCACACAGGAAGTCACTGTGCAAGT
GAGGACGACTGATTTTTTGACTCTGTTTCGAAAGCAACAGACGGCCAAAA
GGTACCCTGAGCTGAAGCCAAAGGTGGAGAGGAAGAGGGAGGGATTGAAC
GAGGGGGGAAGGGAACAGTTGGAGAGGGAGGGGGACGGGGAAGAGCTGGA
GGAATCGCCGTTGGGAGGGAAGGGGGGGCTGCATCAGCGGTCGGCGAGTA
ATGATGGGAAGGGAGGAAATGAGAGAGGTGAAGAGAGAAAGAAGACGGGG
TTGATGAAACAGAGTAAGAAGGAGGAGAGGCAGATGAGGGAGGAGGAGGG
AGATAGACAGGCAACAAAAGATAGGGAAGCACCAGATGAGATGCATGGAG
AATTGTGGACTTAAATTAGGCGATCGCGTCTGTGGTTTTGGAGAAGAGAG
ACATCGTGAATATATACATATACATGTATTTTCTTACATACAAATCAAAT
TAAACCAGACTTGCCCGCAGCAGATAAAACAAATATCCTCATTTTCCCAC
AATCAATGGACCGATTAAAATTTGTTGGAACTTTTTTGTGGTTGCTCTTA
GGTTTAGTGACAAAACAACAGAAACAGAATCACGACACGTAAAATGAAAG
GAACAACTTTACATAGAGATGAGGATAGCGGATATTTGATCGGAGCTCGG
AACGAGAGGCAGTCTCTTTGTGGCAGCGCCTTGGCGAAAGCCATTGCGTT
CATGTCCCATACAGCGAAAGCAAATGCACTAATTTCAACTCCAATGATAA
A
back to top

protein sequence of NO04G04100.1

>NO04G04100.1-protein ID=NO04G04100.1-protein|Name=NO04G04100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1026bp
MTAFSTCSRRPRSLQGQALLVLVLVIILALCRGRKTLTPSVGTSVGAFVS
RSDLGFKSRQPSASPSKRPLIAATALPTTLSPHRARLAPLSAGMWRFDKE
LTQPQSQENGDDSGFDPPGKGIFRFVWGLLKKRTVQAIGITAFALSAVKN
GGGGRKAAGGKVGILDGGGAANAPERYVRSKDPDASSKQQQREQEQEQPQ
KQEHKIAGAGAGAASKSAAVPLPDAECPILPPDDSSSGSSSKKGTAEEPA
VPAAVPSSEQQQHQQQQDGEASGTAAADSLAPEINKEGGKEARSPWTPFK
NWRSKERGAREGEKVVLRQEQQEQQPRKDREEAVGEGITLNRGTAKKDEG
APATDDSKQGEQRENVQDRINPEEEEAEAEEEEEVEEEEEMEEDGDGTVP
FDERESALLEDGEAFLARRGTTQPGQAATSGSRATGKKKNDNNDKNDNKQ
SKRQQQQQKQQHEKNKHPSVVPRPDSGVSSPSTTKLSIPPSLHPSRPGGS
SSFVSGVFRAIAPAVPRVDCVKVYKGEIKFASGSGVIFTPEGYMITNSLL
VRNALELKVTLADGREFPAEVKGVDEVLDVAVLKILPPSPLPRPRDWVLS
VGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGP
LVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIG
VEMMPVTPTLAAQLNQKAAARQRQIQVEQEEKAVKELAEQQELQRKEQQQ
PQQQQAEKGGKGARGQRKRGGMERGRSAFSEILRKAQQAGKHLLQQPPQN
HYPPSPSPSPSPPFSPSTPSSSSSSSSSSSQIHFIPEGGAVVVVNVLEDS
PAQQAGLQHLDILLEIDRCPIYKVEDAQRIIHASGVGRDIEIKVLRSTQE
VTVQVRTTDFLTLFRKQQTAKRYPELKPKVERKREGLNEGGREQLEREGD
GEELEESPLGGKGGLHQRSASNDGKGGNERGEERKKTGLMKQSKKEERQM
REEEGDRQATKDREAPDEMHGELWT*
back to top
Synonyms
Publications