NO04G03870, NO04G03870 (gene) Nannochloropsis oceanica

Overview
NameNO04G03870
Unique NameNO04G03870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3391
Alignment locationchr4:1042616..1046006 +

Link to JBrowse

Properties
Property NameValue
DescriptionPentatricopeptide repeat containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1042616..1046006 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
Homology
BLAST of NO04G03870 vs. NCBI_GenBank
Match: PNX92388.1 (pentatricopeptide repeat-containing protein chloroplastic-like [Trifolium pratense])

HSP 1 Score: 79.3 bits (194), Expect = 6.800e-11
Identity = 68/252 (26.98%), Postives = 122/252 (48.41%), Query Frame = 0
Query:  292 LYSAALKGYGRMG-WKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVL-LPALPRPDLYSYNIVL-RALCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLILE----SSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            +Y+  +KGY + G   D V  +     +  S    D V+  +++ AL + G +DRA+++L EM   R S PA+       LK       G    +    A E +  +   A  +PD+ SYNI++   +  +D  GALS + +++ +GI P  ++  TL+     +G  K A  + +     + V   +  ++ L+ G++  G ++EA++V++KM   G  PNV TY +   G A   + G     +  +KE+
Sbjct:  375 IYTTLMKGYMKAGRVTDTVRMLEAMRCQDDSASHPDHVSYTTVVSALVKAGFMDRAREVLAEMT--RISVPANRITYNILLK-------GYCEQLQMDMARELLKEMDENAGIQPDVVSYNILIDGCILVDDSAGALSFFNEMRAKGIAPTKISYTTLMKAFALSGQPKLAQRVFDEMANDTRVRVDLIAWNMLVEGYSKLGLVEEAKKVIQKMKENGFYPNVSTYGSFASGIALARKPGEALILWNEVKER 617          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: XP_004137961.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Cucumis sativus] >KGN58933.1 hypothetical protein Csa_3G736820 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 8.900e-11
Identity = 90/365 (24.66%), Postives = 167/365 (45.75%), Query Frame = 0
Query:  184 YFTDALISSSHSLPLAEVQGVLQASSRAGDAEGALGLLQFLIGQSQERGGGAGPARMLLDEFLFFLVVKACCIEGDGGL---TVVKNTRALSAVAPLLGEMEGLGIAKSSFLYSAALKGY---GRMGWKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLLP-ALPRPDLYSYNIVL-RALCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLI----LESSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            Y  +A+++    + +  +  V+ A    GD E A  ++Q +      R G     R+L D +L  +       E +  L    +      + +  PLL ++     + +S +Y+  +KGY   GR+G   R+ E      ++ S    D V+  +++ AL + G++DRA+++L EM   R   PA+       LK       G    +    A +    ++  A   PD+ SYNI++  ++  +D  GAL  + +++ +GI P  V+  TL+    ++G  K A  +    L    V   +  ++ LI G+   G I+EA+++++KM   G  P+V TY +L  G +   + G     +  +KE+
Sbjct:  275 YVLEAILAKDIPMCMTTLHSVVAAYVGFGDLETAEKVVQAM------REGKRDICRILRDGYLDEIEDVEDLNEDEDELFKKLLPNLNEEIDSEPPLLPKI----YSPNSRIYTTLMKGYMNEGRVGDTIRMLEAMRNQGDRSSH--PDHVSYTTVVSALVKAGSMDRARQVLAEMT--RIGCPANRITYNILLK-------GYCRLLQMDKAKDLFKEMVDGAGIEPDVVSYNIMIDGSILVDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIVAWNMLIEGYCRLGWIEEAKQLVQKMKENGFFPDVSTYGSLANGISLARKPGEALLLWNEVKER 618          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: KDO36285.1 (hypothetical protein CISIN_1g007970mg [Citrus sinensis])

HSP 1 Score: 79.0 bits (193), Expect = 8.900e-11
Identity = 67/257 (26.07%), Postives = 120/257 (46.69%), Query Frame = 0
Query:  287 AKSSFLYSAALKGYGRMG-WKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLL-PALPRPDLYSYNIVLRA-LCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLI----LESSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            A +S +Y+  +KGY   G   D V  +G    ++ +    D V   +++ AL + G++DRA+++L EM   R   PA+       LK       G    +    A E +  +   A   PD+ SYNI++   +  +D  GAL+ + +++  GI P  ++  TL+     +   K A  +    L    V   +  ++ L+ G+   G ++EA+ ++E+M   G  PNV TY +L  G +   + G     +  +KE+
Sbjct:  210 APNSRIYTTLMKGYMNEGRVSDTVRMLGAMRRQEDNASHPDHVTYTTVVSALVKAGSMDRARQVLAEMT--RIGVPANRITYNILLK-------GYCQQLQIDKAKELLREMADDAKIEPDVVSYNILIDGFILIDDSAGALTFFNEMRARGIAPTKISYTTLMKAFALSSQPKLANKVFDEMLRDPRVKVDIVAWNMLVEGYCRMGLVEEAKRIIERMKENGFYPNVATYGSLANGISLARKPGEALLLWKEIKER 457          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: PSR98199.1 (Pentatricopeptide repeat-containing protein [Actinidia chinensis var. chinensis])

HSP 1 Score: 79.0 bits (193), Expect = 8.900e-11
Identity = 68/255 (26.67%), Postives = 123/255 (48.24%), Query Frame = 0
Query:  289 SSFLYSAALKGYGRMG-WKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLLPALP-RPDLYSYNIVL-RALCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLI----LESSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            +S +Y+  +KGY + G  KD V+ +     ++ S  + D V+  +++ AL + G+++RA+++L EM   R   PA+       LK       G    +    A E    +   +   PD+ SYN ++   +  +D  GAL  + +++  GI P  ++  TL+     +G  K A  +    L+   V   V  ++ L+ G+   G I+EA++++E+M   G  PNV TY +L  G A   + G     +  +KE+
Sbjct:  379 NSRMYTTLMKGYMKGGRVKDTVKMLEAMRHQEDSASQPDHVSYTTVVSALVKVGSMERARQVLAEMT--RIGVPANRITYNILLK-------GYCQQLQMHKAKELKQEMTDCVGIEPDVVSYNTLIDGCILVDDSAGALGYFNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLKDPRVKVDVVAWNMLVEGYCRLGLIEEAKKIVERMKENGSYPNVSTYGSLASGIAVARKPGEALLLWNEVKER 624          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: XP_006428878.1 (pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Citrus clementina] >XP_006480600.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Citrus sinensis] >XP_015386535.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Citrus sinensis] >ESR42118.1 hypothetical protein CICLE_v10011148mg [Citrus clementina])

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-10
Identity = 67/257 (26.07%), Postives = 119/257 (46.30%), Query Frame = 0
Query:  287 AKSSFLYSAALKGYGRMG-WKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLL-PALPRPDLYSYNIVLRA-LCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLI----LESSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            A +S +Y+  +KGY   G   D V  +G    ++      D V   +++ AL + G++DRA+++L EM   R   PA+       LK       G    +    A E +  +   A   PD+ SYNI++   +  +D  GAL+ + +++  GI P  ++  TL+     +   K A  +    L    V   +  ++ L+ G+   G ++EA+ ++E+M   G  PNV TY +L  G +   + G     +  +KE+
Sbjct:  367 APNSRIYTTLMKGYMNEGRVSDTVRMLGAMRRQEDDASHPDHVTYTTVVSALVKAGSMDRARQVLAEMT--RIGVPANRITYNILLK-------GYCQQLQIDKAKELLREMADDAKIEPDVVSYNILIDGFILIDDSAGALTFFNEMRARGIAPTKISYTTLMKAFALSSQPKLANKVFDEMLRDPRVKVDIVAWNMLVEGYCRMGLVEEAKRIIERMKENGFYPNVATYGSLANGISLARKPGEALLLWKEIKER 614          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: KMZ64703.1 (putative Pentatricopeptide repeat-containing protein [Zostera marina])

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-10
Identity = 68/263 (25.86%), Postives = 119/263 (45.25%), Query Frame = 0
Query:  290 SFLYSAALKGYGRMGWKDRVEEMGDEM-LEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLLPALPR-----PDLYSYNIVL-RALCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLILESSSVPASVE----GYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQGRKDP 542
            S +Y+  +KGY + G  D V  + + M  EK  +   D V   +++ AL   GA+DRA+ +LLEM  G    PA+       LK                   + V  LL  + +     P++ SYNI++   +  +D  GAL  + +++++GI P  V+  TL+         K A  + +       V+     ++ LI G+   G +++A++++E M      P+V TY +L  G A   + G     +  +KE+ +  P
Sbjct:  365 SRMYTTLMKGYMKEGRVDSVVHLIEAMRREKDPKSHPDQVTYTTVITALVNAGAMDRARSVLLEM--GHAGVPANRVTYNVLLK-----------GYCQQLQMDRVKELLEEMKKVKGIEPNVVSYNILIDGCIFVDDSAGALFYFNEMREQGINPSKVSYTTLMKAFALNNQPKLAQNVFDEMVKDRRVKVDRVAWNMLIEGYCRLGLVEDAKKLIEMMKESNFIPDVATYGSLANGIALARKPGEALLLWNEVKERCKSSP 614          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: XP_022145600.1 (pentatricopeptide repeat-containing protein At3g09650, chloroplastic, partial [Momordica charantia])

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-10
Identity = 71/257 (27.63%), Postives = 127/257 (49.42%), Query Frame = 0
Query:  289 SSFLYSAALKGY---GRMGWKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLLP-ALPRPDLYSYNIVL-RALCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLI----LESSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            +S +Y+  +KGY   GR+    R+ E      ++ S    D V+  +++ AL + G++DRA+++L EM   R   PA+       LK       G    +    A E +  ++  A   PD+ SYNI++   +  +D  GAL+ + +++ +GI P  V+  TL+    ++G  K A  +    L    V A +  ++ LI G+   G I+EA+++++KM   G  P+V TY +L  G +   + G     +  +KE+
Sbjct:  173 NSRIYTTLMKGYMNEGRVADTMRMLEAMRHQDDRSSH--PDHVSYTTVVSALVKTGSMDRARQVLAEMT--RIGCPANRITYNILLK-------GYCRLLQMDKAKELLKEMVDGAGIEPDVVSYNILIDGCILVDDSAGALAFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKADIVAWNMLIEGYCRLGLIEEAKQLVQKMKESGFFPDVSTYGSLANGISLARKPGEALLLWNEVKER 418          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: GAY69399.1 (hypothetical protein CUMW_271650 [Citrus unshiu])

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-10
Identity = 67/257 (26.07%), Postives = 119/257 (46.30%), Query Frame = 0
Query:  287 AKSSFLYSAALKGYGRMG-WKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLL-PALPRPDLYSYNIVLRA-LCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLI----LESSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            A +S +Y+  +KGY   G   D V  +G    ++      D V   +++ AL + G++DRA+++L EM   R   PA+       LK       G    +    A E +  +   A   PD+ SYNI++   +  +D  GAL+ + +++  GI P  ++  TL+     +   K A  +    L    V   +  ++ L+ G+   G ++EA+ ++E+M   G  PNV TY +L  G +   + G     +  +KE+
Sbjct:  126 APNSRIYTTLMKGYMNEGRVSDTVRMLGAMRRQEDDASHPDHVTYTTVVSALVKAGSMDRARQVLAEMT--RIGVPANRITYNILLK-------GYCQQLQIDKAKELLREMADDAKIEPDVVSYNILIDGFILIDDSAGALTFFNEMRARGIAPTKISYTTLMKAFALSSQPKLANKVFDEMLRDPRVKVDIVAWNMLVEGYCRMGLVEEAKRIIERMKENGFYPNVATYGSLANGISLARKPGEALLLWKEIKER 373          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: GAU26737.1 (hypothetical protein TSUD_317350 [Trifolium subterraneum])

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10
Identity = 67/252 (26.59%), Postives = 121/252 (48.02%), Query Frame = 0
Query:  292 LYSAALKGYGRMG-WKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLL-PALPRPDLYSYNIVLR-ALCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLILE----SSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            +Y+  +KGY + G   D V  +     +  S    D V+  +++ AL + G +DRA ++L EM   R S PA+       LK       G    +    A E +  +   A  +PD+ SYNI++   +  +D  GALS + +++ +GI P  ++  TL+     +G  K A  + +     + V   +  ++ L+ G++  G ++EA++V++KM   G  P+V TY +   G A   + G     +  +KE+
Sbjct:  375 IYTTLMKGYMKAGRVTDTVRMLEAMRCQDDSASHPDHVSYTTVVSALVKAGFMDRACEVLAEMT--RISVPANRITYNILLK-------GYCKQLQMDTARELLKEMAEDAGIQPDVVSYNILINGCILVDDSAGALSFFNEMRAKGIAPTKISYTTLMKAFALSGQPKLAQRVFDEMANDTRVRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFYPDVSTYGSFASGIALARKPGEALILWNEVKER 617          
BLAST of NO04G03870 vs. NCBI_GenBank
Match: XP_008442644.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 2.000e-10
Identity = 70/257 (27.24%), Postives = 126/257 (49.03%), Query Frame = 0
Query:  289 SSFLYSAALKGY---GRMGWKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKILLEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLLP-ALPRPDLYSYNIVL-RALCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGCVKTGNLKRALLI----LESSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVNGGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQ 537
            +S +Y+  +KGY   GR+    R+ E      ++ S    D V+  +++ AL + G++DRA+++L EM   R   PA+       LK       G    +    A E +  ++  A   PD+ SYNI++  ++  +D  GAL  + +++ +GI P  V+  TL+    ++G  K A  +    L    V   +  ++ LI G+   G I+EA+++++KM   G  P+V TY +L  G +   + G     +  +KE+
Sbjct:  373 NSRIYTTLMKGYMNEGRVADTIRMLEAMRNQGDRSSH--PDHVSYTTVVSALVKAGSMDRARQVLAEMT--RIGCPANRITYNIILK-------GYCRLLQMDKAKELLKEMVDGAGIEPDVVSYNIMIDGSILVDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIVAWNMLIEGYCRLGLIEEAKQLIQKMKENGFFPDVSTYGSLANGISLARKPGEALLLWNEVKER 618          
The following BLAST results are available for this feature:
BLAST of NO04G03870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PNX92388.16.800e-1126.98pentatricopeptide repeat-containing protein chloro... [more]
XP_004137961.18.900e-1124.66PREDICTED: pentatricopeptide repeat-containing pro... [more]
KDO36285.18.900e-1126.07hypothetical protein CISIN_1g007970mg [Citrus sine... [more]
PSR98199.18.900e-1126.67Pentatricopeptide repeat-containing protein [Actin... [more]
XP_006428878.11.200e-1026.07pentatricopeptide repeat-containing protein At3g09... [more]
KMZ64703.11.200e-1025.86putative Pentatricopeptide repeat-containing prote... [more]
XP_022145600.11.200e-1027.63pentatricopeptide repeat-containing protein At3g09... [more]
GAY69399.11.200e-1026.07hypothetical protein CUMW_271650 [Citrus unshiu][more]
GAU26737.11.500e-1026.59hypothetical protein TSUD_317350 [Trifolium subter... [more]
XP_008442644.12.000e-1027.24PREDICTED: pentatricopeptide repeat-containing pro... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009410NSK009410Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03870.1NO04G03870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637175gene_2169Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g119gene1817Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03870.1NO04G03870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03870 ID=NO04G03870|Name=NO04G03870|organism=Nannochloropsis oceanica|type=gene|length=3391bp
AGGCATCTTCACGACACATTTCCTGTGCACGCCTGTATTTTCTTGGTTAA
AACAGCTCTCCGAGCCAACACGTCACCATCCGCGCCACCGTCATCACACA
CGAACGTATGCCCTGCCTGCATTTCCCGGCCCTATCAACACCACCACTGC
AAAGATGATCATCAGAAGAAGACGGTCACGACGGCCCCATCCTTCAATAG
ACATTGCCAGCACTTTAAGTGCCCTCTTCCTCGCCACAAGCTGCTTCTTG
GCATCCCTCTCTATACAAAACGCCTTCCTCCTCCCTCCTCCCAGGAGCAG
CCTCAGCAGCCCCAGCCCCGCCACTACCACCACCATACGGACAAGAAGAA
GACCGCCCAACCAGGCAGTCTCTTCATTGACGGCAGATACGAGTGGAGAG
GATGGTTCTCCTTTGATGATGCCCCGCAGGACACCCCCACCACCTTGGCC
TCGCCCCGGCACCACCGCCCCAGCCCCGCTTTTCACTCCCTCTGAGCTCG
CTGACTTGCAAGAGCGGATTCAGAGCGGAACGAACCTAGACAAGGCATTT
CAAGATTTGAGAAGCTGGCGGTCGTCCGAGGAAGGAAATAGCCCCGTGCC
AGACGCGCTGTATCGCGCCCTTCTGGGTCACTGCCGACATGCCCGCCCAC
CACAAGCCTACGCAACTCGCAATTTGGGTTTGGCTCGAGAAGTGGTGCAA
TGCTACTTTACGGACGCATTGATCTCGTCATCACATTCCTTGCCATTGGC
GGAGGTACAAGGGGTTCTGCAGGCGTCGTCAAGGGCAGGAGATGCAGAGG
GGGCATTAGGCTTGCTTCAGTTTTTAATCGGGCAATCCCAAGAGAGGGGT
GGAGGAGCTGGGCCCGCTCGTATGCTTCTGGACGAATTTCTCTTCTTCTT
GGTCGTAAAGGCGTGTTGCATTGAGGGTGATGGCGGCTTGACAGTCGTCA
AAAATACGAGAGCCTTATCAGCAGTGGCGCCTTTGCTGGGTGAGATGGAA
GGGTTGGGGATTGCCAAGTCCAGTTTTTTGTACAGTGCCGCGTTGAAGGG
ATACGGCCGGATGGGGTGGAAAGACCGAGTAGAGGAAATGGGGGACGAGA
TGTTGGAGAAGAGGAGTGAGGTGAAAGTAGACCTGGTGGCGATGAACTCC
CTGTTGGATGCTCTGGCACGGTGTGGGGCGGTGGACCGGGCCCAAAAAAT
ACTGCTGGAGATGGCACGTGGACGACGGTCAGCACCAGCTTCTGAAGCAG
CGGTAGCTACGAGCCTAAAAACAAATGTAGGCGAGAAATTGGGTGCGGGA
CCCTCAGTTGCTTATGCGGCTGCTGCTGAAGCGGTGCCTGTCCTCCTTCC
CGCCCTCCCTCGTCCGGACCTGTACAGCTATAACATCGTTTTGCGGGCAC
TGTGTCCGAATGACCTTGGAGGTGCCTTAAGCCTTTATAGAGATCTAAAG
CAGGAGGGGATTCAGCCGGACGCGGTGACCATAAATACTCTCGTCGCGGG
ATGTGTGAAGACAGGAAATCTGAAACGAGCCTTGTTGATCTTGGAGAGTA
GTTCCGTCCCTGCATCTGTAGAAGGCTATAGTGCCCTAATCGGGGGATTT
GCCGCGAGAGGGAAAATAAAAGAGGCTCAGGAGGTGTTGGAGAAGATGGT
CAACGGAGGATTGAAACCGAATGTGAGGACTTACACGGCCTTGCTCCAGG
GAGCGGCGGCGGTGGGAGAAATGGGGTTGGTGTTTGAGACGTTCGGGATG
ATGAAAGAGCAAGGAAGAAAAGATCCAGGGGTACGACCGACAGTGTGGAC
TTATAATGCTTTGATGGCTGCCTTGGCAAAGGCGGGAAAGGTGCAGGCAA
TGCTGGCCTTGAAAGAAGAGATGTCGAATCCTTCTACTCGAGCTGGTGGT
GGTGCTGCTGCTGTCGCTGTAGCACCCGACGTGGTCACATGCAACACTTT
ATTAGATGCCTTGCTGTTCAAATGTGACCCCCCTCGGATCCGCCAAGCCG
AAATGCTGTTTCTCGAAATGTTGGAAGACGGCCCTGTTCCAGACCAATAC
ACCTTCTCCACCCTCCTCCGTGCCTACATCCCTCCCCTCCCTTCCTCTCG
CTCCCTCCCGCCCCCTCGCTCTCCCGTCGATCTTCTCAGCCGTCTTCCTA
GTGTACTTCTCCATCGTGGGGGAGGGCGAGGAGGGGAAGATGACCCTCCC
CTTGAAGTGGCTGCTGCTGAAGCTGCTGCTTTAGATGCTGCCTACACGAG
CGCCGAGCCCTCACCGTCTGAGATCTTACCGGGACCCGATCGATTGCTGG
AGTTAATGAACAAGAAGCACGATCTTGGTCTGTTGCTTGATACCACAGCT
GTCAACTCTCTCTTGCTCGCCTTCATTAAATCAGGGGCGATCAAACGGTC
CTTGGAGGTGTTCCACGACTTCAAGAAGGGGAACTTGACCCATGGCGCAC
TCGTCTCGTCCTCCCCCTCTGCCTCCCTACCTTTCTCGTCCTCGATGAGA
GAAAGAAGGCGGGGCATCCCAGATGTTGTGACGTACACCATTTTGGTGAA
GGGTGTGGCAGCGTCGGATAACATGTATGCGGGCGCAAAAATCATGCAGT
TATATCGGGAGATGCGGAGGGAATTTGGTATTGCTCCTGATTTACAACTG
GCATACGCGTTGGTGAACTCGTTTGCCTCTGCACGATCGAGGGTGGGTGG
GTTGGGGATGGAGGACCTGGAGGAGGTGTTTAACGACTTAAGGGAGCTTG
GATGGAAGAAAGAGACCCTGGGCAGGCTCGAGAAGCGGGCGTCGAGCTAT
GAAGGGTTATACTCGGAGGCATGGAAAGAGGGTCCGGCGAGGAAGGGTGG
GAGAGGAGCAGGTAGAAGAGAGGAGAAGGCGTCGGATCGGTTCTTTGATA
AGTACGGGTGGAATAAGTTTGAGAGTGGGTATAACTTTTTTGCCTAGTGC
AAAGTAAGGTCGAGAAAAAGGCGGGGGACGAGAAAGAATTCGCAGGGATT
GACCAACAAATTTAAGAAATGATTGTGATGGTGGATGAGAGAGGGCTAGG
AGATATCGAGACCTATGATTTCTGTGGAGTTCAAAGATAGGGTCTGTGAG
GCAGGGAAGCGGATATAGAAGGAGCGATGGAAAGAGATATCAAAACTATC
TTTTTTCCAGCTAGTTAAAAGTGGAAGTTGTGGTGATGTCTGTAAATAGT
GAAAGCTTGGCAAGTGAGAACGAAAAGAGTCAGTAAGTACGGTACCATAA
AAGGAAGAGTAATCCAGGCAGCAGCAGCAGCAGCAGTTAATAGCGAACAG
CGCACCCAAGAAGAATATATCCAGGATAATAGACAAAAGAAAGATAGTGC
CAGTAATATGAACTAAAAACGAAGATGCGTTGGAAGCGTTT
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protein sequence of NO04G03870.1

>NO04G03870.1-protein ID=NO04G03870.1-protein|Name=NO04G03870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=931bp
MIIRRRRSRRPHPSIDIASTLSALFLATSCFLASLSIQNAFLLPPPRSSL
SSPSPATTTTIRTRRRPPNQAVSSLTADTSGEDGSPLMMPRRTPPPPWPR
PGTTAPAPLFTPSELADLQERIQSGTNLDKAFQDLRSWRSSEEGNSPVPD
ALYRALLGHCRHARPPQAYATRNLGLAREVVQCYFTDALISSSHSLPLAE
VQGVLQASSRAGDAEGALGLLQFLIGQSQERGGGAGPARMLLDEFLFFLV
VKACCIEGDGGLTVVKNTRALSAVAPLLGEMEGLGIAKSSFLYSAALKGY
GRMGWKDRVEEMGDEMLEKRSEVKVDLVAMNSLLDALARCGAVDRAQKIL
LEMARGRRSAPASEAAVATSLKTNVGEKLGAGPSVAYAAAAEAVPVLLPA
LPRPDLYSYNIVLRALCPNDLGGALSLYRDLKQEGIQPDAVTINTLVAGC
VKTGNLKRALLILESSSVPASVEGYSALIGGFAARGKIKEAQEVLEKMVN
GGLKPNVRTYTALLQGAAAVGEMGLVFETFGMMKEQGRKDPGVRPTVWTY
NALMAALAKAGKVQAMLALKEEMSNPSTRAGGGAAAVAVAPDVVTCNTLL
DALLFKCDPPRIRQAEMLFLEMLEDGPVPDQYTFSTLLRAYIPPLPSSRS
LPPPRSPVDLLSRLPSVLLHRGGGRGGEDDPPLEVAAAEAAALDAAYTSA
EPSPSEILPGPDRLLELMNKKHDLGLLLDTTAVNSLLLAFIKSGAIKRSL
EVFHDFKKGNLTHGALVSSSPSASLPFSSSMRERRRGIPDVVTYTILVKG
VAASDNMYAGAKIMQLYREMRREFGIAPDLQLAYALVNSFASARSRVGGL
GMEDLEEVFNDLRELGWKKETLGRLEKRASSYEGLYSEAWKEGPARKGGR
GAGRREEKASDRFFDKYGWNKFESGYNFFA*
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Synonyms
Publications