NO04G03350, NO04G03350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03350 vs. NCBI_GenBank
Match: CBJ29174.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.9 bits (172), Expect = 3.900e-9 Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 0 Query: 17 ILNRHKQPRVQSILSIMASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPE 143 +L+ + P S SIM S + EL AAE KA+ IV EARA+R +R+KEA EA + +RAEKE +Q ++ G++G + L QT+ + ++ D+ +NKE V +LV +V ++ VPE Sbjct: 23 VLSHNSTP--NSSTSIM-STQIQELIAAETKASSIVAEARASRSKRMKEAKKEAEALCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKEVVGDLLVHEVCHIVYSVPE 145
BLAST of NO04G03350 vs. NCBI_GenBank
Match: XP_008894924.1 (V-type ATPase, G subunit [Phytophthora parasitica INRA-310] >ETI39031.1 V-type ATPase, G subunit [Phytophthora parasitica P1569] >ETK79219.1 V-type ATPase, G subunit [Phytophthora parasitica] >ETL32642.1 V-type ATPase, G subunit [Phytophthora parasitica] >ETL85901.1 V-type ATPase, G subunit [Phytophthora parasitica] >ETM39056.1 V-type ATPase, G subunit [Phytophthora parasitica] >ETN19009.1 V-type ATPase, G subunit [Phytophthora parasitica INRA-310] >ETO67768.1 V-type ATPase, G subunit [Phytophthora parasitica P1976] >ETP08933.1 V-type ATPase, G subunit [Phytophthora parasitica CJ01A1] >ETP36967.1 V-type ATPase, G subunit [Phytophthora parasitica P10297] >KUF82255.1 V-type proton ATPase subunit G 1 [Phytophthora nicotianae] >KUF89121.1 hypothetical protein AM588_10002074 [Phytophthora nicotianae]) HSP 1 Score: 70.5 bits (171), Expect = 5.100e-9 Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 0 Query: 34 ASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 A+ + EL AAE KA++++ EAR RGERLK+A +EA I YR + E FQ + G + L+ +T+ E+ K+ A+F+QNK++V++++ V + VPEA Sbjct: 3 ANQSIKELMAAETKASKVISEARQERGERLKQAKLEAEAEITAYRKQMERSFQ--MNGNTDLMGDDPSILEEETQREIKKMQAEFQQNKQSVITMMGQHAVRVQLRVPEA 110
BLAST of NO04G03350 vs. NCBI_GenBank
Match: XP_009518588.1 (hypothetical protein PHYSODRAFT_556110 [Phytophthora sojae] >EGZ23300.1 hypothetical protein PHYSODRAFT_556110 [Phytophthora sojae]) HSP 1 Score: 70.1 bits (170), Expect = 6.700e-9 Identity = 42/113 (37.17%), Postives = 69/113 (61.06%), Query Frame = 0 Query: 31 SIMASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 ++ A+ + EL AAE KA++I+ EAR RGERLK+A +EA I YR + E FQ + G + L+ +T+ ++ K+ A+F+QNK++V++++ V + VPEA Sbjct: 398 NMAANQSIKELMAAETKASKIISEARQERGERLKQAKLEAEAEITAYRKQMERTFQ--MNGNTDLMGDDPSILEEETQRDIKKMQAEFQQNKQSVITMMGQHAVRVQIRVPEA 508
BLAST of NO04G03350 vs. NCBI_GenBank
Match: GAT46755.1 (vacuolar ATP synthase subunit [Mycena chlorophos]) HSP 1 Score: 70.1 bits (170), Expect = 6.700e-9 Identity = 42/111 (37.84%), Postives = 70/111 (63.06%), Query Frame = 0 Query: 30 LSIMASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDV 141 +S S G+ L AE+ AA+IVQ+AR R ++LK+A EA+R I+ Y+ KE++F+ F + GT+ S +D++TE L ++A + +NKE V+ L+D+V V ++ Sbjct: 1 MSAQQSQGIQTLLEAEKDAAKIVQQARQYRVQKLKDARSEAQREIDEYKKSKEDEFKAFEASHAGTTSSAQTAVDKETEASLKTITASYNKNKEEVVKKLLDRVVLVKPEL 111
BLAST of NO04G03350 vs. NCBI_GenBank
Match: OQR85287.1 (hypothetical protein ACHHYP_12006 [Achlya hypogyna]) HSP 1 Score: 70.1 bits (170), Expect = 6.700e-9 Identity = 43/110 (39.09%), Postives = 68/110 (61.82%), Query Frame = 0 Query: 34 ASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 A+ + EL AAE KA++I+ EAR RGERLK+A VEA I YR ++++ FQ G ++ +D++TE ++ K+ D+++NK+ VL ++ VT V + VP A Sbjct: 3 ANQSIKELMAAETKASKIISEARQERGERLKQAKVEAEAEIAAYRRQQDQAFQ---MNSTDLLGDDSSIMDQETEQDIQKMRNDYQRNKDGVLQLMTSHVTKVVLKVPVA 109
BLAST of NO04G03350 vs. NCBI_GenBank
Match: POM57541.1 (V-type ATPase, G subunit [Phytophthora palmivora var. palmivora]) HSP 1 Score: 70.1 bits (170), Expect = 6.700e-9 Identity = 43/129 (33.33%), Postives = 79/129 (61.24%), Query Frame = 0 Query: 15 IIILNRHKQPRVQSILSIMASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 I +L++ ++ +Q+ ++ A+ + EL AAE KA++++ EAR RGERLK+A +EA I YR + E FQ + G + L+ +T+ ++ K+ A+F+QNK++V++++ V + VP+A Sbjct: 381 ITLLSQWEKADIQATMA--ANQSIKELMAAETKASKVISEARQERGERLKQAKLEAEAEITAYRKQMERTFQ--MNGNTDLMGDDPSILEEETQRDIKKMQAEFQQNKQSVITMMGQHAVRVQIRVPDA 505
BLAST of NO04G03350 vs. NCBI_GenBank
Match: POM60245.1 (V-type ATPase, G subunit [Phytophthora palmivora var. palmivora]) HSP 1 Score: 70.1 bits (170), Expect = 6.700e-9 Identity = 43/129 (33.33%), Postives = 79/129 (61.24%), Query Frame = 0 Query: 15 IIILNRHKQPRVQSILSIMASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 I +L++ ++ +Q+ ++ A+ + EL AAE KA++++ EAR RGERLK+A +EA I YR + E FQ + G + L+ +T+ ++ K+ A+F+QNK++V++++ V + VP+A Sbjct: 381 ITLLSQWEKADIQATMA--ANQSIKELMAAETKASKVISEARQERGERLKQAKLEAEAEITAYRKQMERTFQ--MNGNTDLMGDDPSILEEETQRDIKKMQAEFQQNKQSVITMMGQHAVRVQIRVPDA 505
BLAST of NO04G03350 vs. NCBI_GenBank
Match: XP_002901288.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58815.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 69.7 bits (169), Expect = 8.800e-9 Identity = 42/113 (37.17%), Postives = 69/113 (61.06%), Query Frame = 0 Query: 31 SIMASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 ++ A+ + EL AAE KA++I+ EAR RGERLK+A +EA I YR + E FQ + G + L+ +T+ ++ K+ A+F+QNK++V++++ V + VPEA Sbjct: 397 TMAANQSIKELMAAETKASKIISEARQERGERLKQAKLEAEAEITAYRKQMERSFQ--MNGNTDLMGDDPSILEEETQRDIKKMQAEFQQNKQSVITMMGQHAVRVQLRVPEA 507
BLAST of NO04G03350 vs. NCBI_GenBank
Match: KIY52780.1 (V-type ATPase [Fistulina hepatica ATCC 64428]) HSP 1 Score: 69.7 bits (169), Expect = 8.800e-9 Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 30 LSIMASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDV 141 +S S G+ L AE++AA+IVQ AR R +RLK+A EA + IE Y+ KE +F+ + + G + A +DR+TE +LA ++A ++ NKE V+ L+D+V V ++ Sbjct: 1 MSAQQSQGIQTLLEAEKEAAKIVQHARQYRIQRLKDARFEADKEIEAYKKSKEAEFKAYEASHAGATSEVQAAVDRETEVKLANIAASYEANKEKVVKKLMDRVVLVKPEL 111
BLAST of NO04G03350 vs. NCBI_GenBank
Match: XP_009841516.1 (V-type ATPase, G subunit [Aphanomyces astaci] >ETV69057.1 V-type ATPase, G subunit [Aphanomyces astaci]) HSP 1 Score: 68.9 bits (167), Expect = 1.500e-8 Identity = 41/110 (37.27%), Postives = 68/110 (61.82%), Query Frame = 0 Query: 34 ASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 A+ + EL AE KA++I+ EAR RG+RLK+A EA I YR ++++ FQ G ++ +D++T+ ++ K+ D+++NKEAVL+++ VT V + VP A Sbjct: 3 ANQSIKELMTAETKASKIISEARQERGDRLKQAKAEAEAEINAYRRQQDQVFQ---MNSTDLLGDDSSIMDKETDQDIQKMKGDYEKNKEAVLNLMYGHVTKVVLKVPAA 109 The following BLAST results are available for this feature:
BLAST of NO04G03350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03350 ID=NO04G03350|Name=NO04G03350|organism=Nannochloropsis oceanica|type=gene|length=1714bpback to top protein sequence of NO04G03350.1 >NO04G03350.1-protein ID=NO04G03350.1-protein|Name=NO04G03350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=151bpback to top Synonyms
Publications
|