NO04G03350, NO04G03350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03350 vs. NCBI_GenBank
Match: EWM28668.1 (Vacuolar (H+)-ATPase G subunit [Nannochloropsis gaditana]) HSP 1 Score: 151.0 bits (380), Expect = 3.000e-33 Identity = 93/147 (63.27%), Postives = 101/147 (68.71%), Query Frame = 0 Query: 33 MASGGMAELRAAEQKAAQIVQEAR-------------------------------------AARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPE 143 MASGGMAELRAAEQKAAQIVQEAR A+RG+RLKEATVEARRVIEGYR +KE+QFQ+FVKTKYG+SGSQTADLDRQTE ELAKLSADFK NK+ VL VLVDKVTNV + E Sbjct: 1 MASGGMAELRAAEQKAAQIVQEARAGNNSDSDMTCPPIVDLHPVSENISCANLMLRCRGRDASRGQRLKEATVEARRVIEGYRDDKEKQFQDFVKTKYGSSGSQTADLDRQTEAELAKLSADFKHNKDVVLDVLVDKVTNVKTYMTE 147
BLAST of NO04G03350 vs. NCBI_GenBank
Match: GAX14375.1 (V-type H+-transporting ATPase subunit G [Fistulifera solaris]) HSP 1 Score: 83.6 bits (205), Expect = 5.900e-13 Identity = 45/107 (42.06%), Postives = 71/107 (66.36%), Query Frame = 0 Query: 37 GMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 G+ EL AAE +A+QIV EAR RG+R+K+A VEA+ +I+ YR EK+E+F V + G+ G+ +A L +T E+ + A F++N + + VL+ K V+++VP A Sbjct: 7 GIKELMAAETRASQIVAEARTGRGDRMKQAKVEAQSLIDAYRGEKQEEFNNMVLSTGGSQGNASAKLQAETAKEIKAMEASFQKNAQKAIDVLLSKCCEVSLEVPTA 113
BLAST of NO04G03350 vs. NCBI_GenBank
Match: GAX09854.1 (V-type H+-transporting ATPase subunit G [Fistulifera solaris]) HSP 1 Score: 82.0 bits (201), Expect = 1.700e-12 Identity = 44/107 (41.12%), Postives = 70/107 (65.42%), Query Frame = 0 Query: 37 GMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 G+ EL AAE +A+QIV EAR RG+R+K+A VEA+ +I+ YR EK+E+F V + G+ G+ +A L +T E+ + F++N + + VL+ K V+++VP A Sbjct: 7 GIKELMAAETRASQIVAEARTGRGDRMKQAKVEAQSLIDAYRGEKQEEFNNMVLSTGGSQGNASAKLQAETAKEIKAMEVSFQKNAQKAIDVLLSKCCEVSLEVPTA 113
BLAST of NO04G03350 vs. NCBI_GenBank
Match: OEU07532.1 (H+-ATPase G subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 80.9 bits (198), Expect = 3.800e-12 Identity = 47/112 (41.96%), Postives = 75/112 (66.96%), Query Frame = 0 Query: 33 MASG-GMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 M++G G+ EL AAE +A+QIV EAR RG+R+K+A + + +I YRAEK+E+F V +K G+ GS +A L +T ++A + A F++N + + VL+ K V+++VP A Sbjct: 1 MSTGAGIQELMAAETRASQIVAEARLGRGDRMKQAKADGQDLISTYRAEKQEEFNNMVLSKGGSEGSASAKLQSETNKDVADMEALFQKNAQKAVDVLLSKCCEVSLEVPTA 112
BLAST of NO04G03350 vs. NCBI_GenBank
Match: XP_002186418.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65888.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 80.5 bits (197), Expect = 5.000e-12 Identity = 44/107 (41.12%), Postives = 71/107 (66.36%), Query Frame = 0 Query: 37 GMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 G+ EL AAE +A+QIV EAR RG+R+K+A VEA+++I+ YRAEK+E+F ++ G+ G+ A L +T E+ + F++N + + VL+ K V+++VP A Sbjct: 7 GIQELMAAETRASQIVAEARIGRGDRMKQAKVEAQQLIDSYRAEKQEEFNNMALSQGGSEGNAAAALQAETNKEVQAMEGLFQKNVQGAVDVLLSKCCEVSLEVPTA 113
BLAST of NO04G03350 vs. NCBI_GenBank
Match: XP_008878022.1 (V-type ATPase, G subunit [Aphanomyces invadans] >ETV93386.1 V-type ATPase, G subunit [Aphanomyces invadans]) HSP 1 Score: 73.2 bits (178), Expect = 7.900e-10 Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 0 Query: 34 ASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEAWGVCTK 150 A+ + EL AAE KA++I+ EAR RG+RLK+A EA I YR ++++ FQ G + +D++T+ E+ K++ D+ +NK+AVL+++ VT V + VPEA V K Sbjct: 3 ANQSIKELMAAETKASKIISEARQERGDRLKQAKAEAEAEIAAYRRQQDQVFQ---MNSTDLLGDDSTIMDKETDQEIQKMTGDYNKNKDAVLNMMYGHVTKVVLKVPEARKVTHK 115
BLAST of NO04G03350 vs. NCBI_GenBank
Match: XP_001831574.1 (hypothetical protein CC1G_11571 [Coprinopsis cinerea okayama7#130] >EAU90247.1 hypothetical protein CC1G_11571 [Coprinopsis cinerea okayama7#130]) HSP 1 Score: 72.0 bits (175), Expect = 1.800e-9 Identity = 44/108 (40.74%), Postives = 71/108 (65.74%), Query Frame = 0 Query: 30 LSIMASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVN 138 +S S G+ L AE++AA+IVQ+AR R +RLK+A EA R IE Y+ KE +F+ F + GT+ + +DR+TE +LA ++ + +NK+AV++ L+D+V V+ Sbjct: 1 MSAQQSQGIQTLLEAEKEAAKIVQQARQYRVQRLKDARAEASREIEEYKKAKEAEFRAFESSHAGTTSVAQSTVDRETEEKLAVINESYDRNKDAVVTKLLDRVVLVH 108
BLAST of NO04G03350 vs. NCBI_GenBank
Match: XP_016272138.1 (V-type H+-transporting ATPase subunit G [Rhodotorula toruloides NP11] >EMS21019.1 V-type H+-transporting ATPase subunit G [Rhodotorula toruloides NP11] >CDR48856.1 RHTO0S21e00320g1_1 [Rhodotorula toruloides]) HSP 1 Score: 72.0 bits (175), Expect = 1.800e-9 Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 0 Query: 35 SGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVN 138 S G+A L AE++A+QIV +AR R +RLK+A EA + IE RA+KE +F+EF G S S ++++ T+ LAK+ A F++N+E V+ L+++V VN Sbjct: 5 SQGIATLLDAEKEASQIVAKAREYRNQRLKDARGEASKEIEQLRAKKEAEFKEFENQHSGDSSSSQDEVNKATQEALAKIEASFEENREKVVKDLLERVVQVN 107
BLAST of NO04G03350 vs. NCBI_GenBank
Match: OQS04858.1 (hypothetical protein THRCLA_20778 [Thraustotheca clavata]) HSP 1 Score: 71.6 bits (174), Expect = 2.300e-9 Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 0 Query: 34 ASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVNVDVPEA 144 A+ + EL AAE KA++I+ EAR RGERLK+A VEA I YR ++++ FQ G ++ +D++TE ++ K+ D+ NKEAVL ++ + V V + VPEA Sbjct: 3 ANQSIKELMAAETKASKIISEARQERGERLKQAKVEAEAEIAAYRLQQDQVFQ---MNSTDLLGDDSSIMDKETEDDIQKMRNDYHANKEAVLELMTNYVQKVVLKVPEA 109
BLAST of NO04G03350 vs. NCBI_GenBank
Match: PRQ72473.1 (Vacuolar (H+)-ATPase G subunit-domain containing protein [Rhodotorula toruloides]) HSP 1 Score: 71.2 bits (173), Expect = 3.000e-9 Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 0 Query: 35 SGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKEEQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDKVTNVN 138 S G+A L AE++A+QIV +AR R +RLK+A EA + IE RA+KE F+EF G S S ++++ T+ LAK+ A F++N+E V+ L+++V VN Sbjct: 5 SQGIATLLDAEKEASQIVAKAREYRNQRLKDARGEASKEIEQLRAKKEADFKEFENQHSGDSSSSQDEVNKATQEALAKIEASFEENREKVVKDLLERVVQVN 107 The following BLAST results are available for this feature:
BLAST of NO04G03350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03350 ID=NO04G03350|Name=NO04G03350|organism=Nannochloropsis oceanica|type=gene|length=1714bpback to top protein sequence of NO04G03350.1 >NO04G03350.1-protein ID=NO04G03350.1-protein|Name=NO04G03350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=151bpback to top Synonyms
Publications
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