NO04G02670, NO04G02670 (gene) Nannochloropsis oceanica

Overview
NameNO04G02670
Unique NameNO04G02670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1416
Alignment locationchr4:711512..712927 +

Link to JBrowse

Properties
Property NameValue
Description4fe-4s ferredoxin iron-sulfur binding domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:711512..712927 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013283ABCE
IPR021039Fe-S-bd_prot_LdpA_C
IPR0178964Fe4S_Fe-S-bd
Homology
BLAST of NO04G02670 vs. NCBI_GenBank
Match: EWM28645.1 (4fe-4s ferredoxin iron-sulfur binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 405.6 bits (1041), Expect = 2.100e-109
Identity = 232/423 (54.85%), Postives = 275/423 (65.01%), Query Frame = 0
Query:   50 ALLEEIVALMSTDPKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAIPPLEKLTALASGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPYHVEAADVLSSLAGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASLLGSREEGGRD---TQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQAIVAVVKAAFGVVRPVKER 470
            +LL E V LMS DPK+AL+EGRWVKLICGASYQDLPRV+ALC AYTLAGVDCID+SAS+AVVTAAEEGV  AM +A+Q L                                                                                        A PY VEAADVL+SLAGR+DALEIHTN S+ SA  G+DPF+DLCRRI+   S LRA+SVSFP+MG AGT AFL+SR+ +F R FG D ER       G G+    R   LHIWQTDGRPMSGDIG+GTTLSAVKF ++VLRS+ALPWAS     E +HFLQLAGGTNAYTAEKLA EGLLSPAS++  + +  ++   + WVHGLAFGGFARMEVDR+M++WGLG E+SL+EAPP A++AV++AAFGVVRP+K+R
Sbjct:   66 SLLTEAVELMSDDPKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAAMLLAEQVL---------------------------------------------------------------------------------------EAVPYQVEAADVLTSLAGRIDALEIHTNASASSA--GRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRP--LHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWAS-SMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIKKR 396          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: WP_036532316.1 (4Fe-4S ferredoxin [Neosynechococcus sphagnicola] >KGF73072.1 4Fe-4S ferredoxin [Neosynechococcus sphagnicola sy1])

HSP 1 Score: 261.2 bits (666), Expect = 6.400e-66
Identity = 179/423 (42.32%), Postives = 226/423 (53.43%), Query Frame = 0
Query:   63 PKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQT--LGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAIP-PLEKLTALASGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPYH-VEAADVLSSLAGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASLLGSREEGGRDTQWVHGLAFGGFARM-------EVDRVMAEWGLGSESSL-------LEAPPQAIVAVVKAAFGVVRPVK 468
            P  +L +G W KLICGAS+Q LP V++L LAY LAG DCID+SA  AVV AA+  + VA+ + +Q    G     +PWLMVS+ND ED HFRKA+FDPA CP DC RPC +ICP QAI  P+E     ASGV +      RCYGCGRCL VCPL  I    +H   AA     L   VDA+EIHT V  LSAFE       L + +Q  +  LR +++S P    AG   +L + SE+                        +       IWQTDGRPMSGDIGKGTT +A+K GE VL +R LP            ++QLAGGTN YT  KLAA GLL P           R    + G+A+G +AR         +++   E  +GS  S        LE  P  +  +V AA  ++ P+K
Sbjct:    7 PLRSLQQGHWFKLICGASFQHLPAVRSLTLAYALAGADCIDVSADPAVVAAAQSALQVALELRQQAQQRGFLASGKPWLMVSLNDGEDPHFRKAAFDPATCPPDCSRPCATICPAQAIVFPVEG----ASGVID-----QRCYGCGRCLPVCPLNKIITRSHHSTPAAIAPLVLQMEVDAIEIHTQVGRLSAFE------QLWQSLQPWIGRLRLMAISCP--DGAGLVDYLWALSEI------------------------ISPLPCPLIWQTDGRPMSGDIGKGTTHAAIKLGEKVLAAR-LP-----------GYVQLAGGTNHYTVPKLAALGLLRPTPPYPFLPPEPR----IAGIAYGSYARTLLLPYLDTLEKFPGEEAVGSVISTQVPRTLPLETVPDLLWQMVAAAHSLIAPLK 372          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: XP_023006432.1 (uncharacterized protein LOC111499161 isoform X1 [Cucurbita maxima])

HSP 1 Score: 260.4 bits (664), Expect = 1.100e-65
Identity = 161/428 (37.62%), Postives = 225/428 (52.57%), Query Frame = 0
Query:   48 LRALLEEI-VALMSTDPKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAIPPLEKL------TALASGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPYHVEAADVLSSL-AGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASLLGSREEGGRDTQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQAIVAVVKAAFGVVRPVK 468
            +R L+  I ++ + + P  +L +G W+KLICGAS++D+  ++ L L YTLAGVDCID +A  +VV+A  EG+  A  +          RRPW+M+SVND +DLHFRKA FDP  CP+DC RPCE +CP  AI   +++       A  SG  +G    +RCYGCGRC  VCP   I    Y  +AA     +  G VDALEIHTN    +      PF +L  ++ +S   LR ++VS P +G+  T + +++   +                     E  LR    L++WQ DGRPMSGDIG+G T   + F   +  S   P            FLQLAGGTN YT + L  +GL      L S+E        + G+A+GG+AR  V RV++     S  S +E  P  ++A +  A  +V  VK
Sbjct:   30 VRRLVNRIGISSVQSSPLESLRDGNWIKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIQAARDIID-------VRRPWVMISVNDDQDLHFRKAGFDPENCPLDCSRPCEIVCPANAISLRKEIMNEPSEVASLSGALKGGVITERCYGCGRCSPVCPYDKINLVTYVRDAATTAKLIKRGDVDALEIHTNGRQTT------PFQELWNKLGDSSKYLRLVAVSLPNIGDL-TISTMKTMFSIM--------------------ESQLR---CLNLWQLDGRPMSGDIGRGATRETIAFAAQLALSNDRP----------PGFLQLAGGTNFYTVDGLKKQGLFQSRKDLMSKELSSSLHALIGGIAYGGYARKIVGRVLSSMQAQSGDSNIEDYPDYLLAALVEALTLVGTVK 410          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: WP_006515917.1 (Fe-S-cluster-containing hydrogenase subunit [Leptolyngbya sp. PCC 7375] >EKV01522.1 Fe-S-cluster-containing hydrogenase subunit [Leptolyngbya sp. PCC 7375])

HSP 1 Score: 259.2 bits (661), Expect = 2.400e-65
Identity = 168/410 (40.98%), Postives = 230/410 (56.10%), Query Frame = 0
Query:   62 DPKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAIPPLEKLTALASGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPYHVEAADVLSSLAGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASLLGSREEGGRDTQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQAIVAVVKAAFGVVRPVKERIK 472
            +P  +L  G+W KLICGASYQD+ +V+ L L Y+LAG DCID++A  AVV AA +G+  +  V +   G    RRPWLMVS+ND +D HFRKA FD  +CPV+CPRPCE +CP  AI  L     L SG+  GV   +RCYGCGRCL VCP GL+  + + V A +++ +L   +DA+EIHT +        Q  F  L ++I   +  L+ ++VS P   E  +T  +   +EL+                      D + ++LL  WQTDGRPMSGDIG+GTTL+ V+  E VL +R LP            ++QLAGGTN YT  KL +  LL P   L S  E   +T  +HG+A+G +AR  ++       LG     LE  P+ +   V  A G+V  +K  I+
Sbjct:    6 NPLESLRLGQWFKLICGASYQDVSKVRNLSLVYSLAGADCIDVAADLAVVQAATDGIIASQFVIQTDSG----RRPWLMVSLNDGQDPHFRKAWFDGRKCPVNCPRPCERVCPADAISLLSDKPGL-SGL--GVI-AERCYGCGRCLPVCPYGLLKENAFTVAAGELVPTLIPFIDAIEIHTQIGR------QIEFQRLWQQIASYIPQLKLVAVSCP-DSETCSTTIVDYLTELYQFM-------------------DPKPNQLL--WQTDGRPMSGDIGRGTTLATVRLAEKVLNAR-LP-----------GYVQLAGGTNDYTVAKLRSLNLLKPR--LQSLGETNSETIGIHGIAYGSYARRLLN-------LG--DGHLEDEPEQLWQQVNLALGLVSQIKPDIR 356          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: WP_023071166.1 (4Fe-4S ferredoxin [Leptolyngbya sp. Heron Island J] >ESA38043.1 4fe-4s ferredoxin [Leptolyngbya sp. Heron Island J])

HSP 1 Score: 258.8 bits (660), Expect = 3.200e-65
Identity = 162/403 (40.20%), Postives = 221/403 (54.84%), Query Frame = 0
Query:   66 ALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAIPPLE-KLTALASGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPYHVEAADVLSSLAGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASLLGSREEGGRDTQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQAIVAVVKAAFGVVRPVK 468
            AL  G+W KLICGASYQD+ +V+ L L Y+LAG DCID++A  AVV AA EG+ ++  +A    G    +RPWLMVS ND  D HFRKA FD   CP DC RPCE ICP  AI P+   L+   S V       +RCYGCGRC+ VCP GL+  H + V A DVL +L   +DA+EIHT V        Q+ F+ L  ++   +  L+ +++S P   +  + A +   ++L+                      + + S+LL  WQTDGRPMSGDIGKGTT + ++  E VL +R LP            ++QLAGGTN YT  KL +  LLSP      +E+   +T  +HG+A+G +AR  V+            S LE  P+ +   V+ A  +V  +K
Sbjct:   10 ALKFGQWFKLICGASYQDVSKVRNLSLVYSLAGADCIDVAADLAVVRAAVEGIAISQTIAPAFCG----QRPWLMVSFNDGADPHFRKAWFDIQSCPTDCSRPCERICPADAILPVSPSLSIGLSQVAVPGVLTERCYGCGRCVPVCPYGLLKEHAFTVAAGDVLPTLMPYIDAIEIHTQVGR------QNEFEHLWHQLAAYIPHLKLVAISCP-DSDIQSNAIVDYLTQLYQLM-------------------EPKPSQLL--WQTDGRPMSGDIGKGTTRATIRLAEKVLNAR-LP-----------GYVQLAGGTNDYTVAKLRSLDLLSPPPSTSGQEQ--TETPSIHGIAYGSYARRLVN---------VGDSPLEKRPEQLWQQVQLAHALVSQIK 357          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: XP_022958999.1 (uncharacterized protein LOC111460121 [Cucurbita moschata])

HSP 1 Score: 258.1 bits (658), Expect = 5.400e-65
Identity = 164/431 (38.05%), Postives = 225/431 (52.20%), Query Frame = 0
Query:   48 LRALLEEI-VALMSTDPKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAIPPLEKL------TALASGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPYHVEAADVLSSL-AGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASL---LGSREEGGRDTQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQAIVAVVKAAFGVVRPVK 468
            +R L+  I +A + + P  +L +G W+KLICGAS++D+  ++ L L YTLAGVDCID +A  +VV+A  EG+  A  +          RRPW+M+SVND +DLHFRKA FDP  CP+DC RPCE +CP  AI   E++       A  SG  +G    +RCYGCGRC  VCP   I    Y  +AA     +  G VDALEIHTN    +      PF +L  ++ +S   LR ++VS P +G+  T + +++   +                     E  LR S L   WQ DGRPMSGDIG+G T   + F   +  S   P            FLQLAGGTN YT + L  +GL    S    L ++E        + G+A+GG+AR  V RV++     S  S +E  P  ++A +  A  +V  VK
Sbjct:   30 VRRLVNRIGIASVQSSPLESLRDGNWIKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIQAARDIVD-------VRRPWVMISVNDVQDLHFRKAEFDPENCPLDCSRPCEIVCPANAISLREEIMNEPSEVASLSGALKGGVITERCYGCGRCSPVCPYDKINLVTYVRDAATTAKLIKRGDVDALEIHTNGRQTT------PFQELWDKLGDSSKYLRLVAVSLPNIGDL-TISTMKTMFSIM--------------------ESQLRCSNL---WQLDGRPMSGDIGRGATRETIAFAAQLALSNDRP----------PGFLQLAGGTNFYTVDGLKKQGLFQSTSTRKDLMNKELSSSLHALIGGIAYGGYARKIVGRVLSSMQAQSGDSNIENYPDYLLAALVEALALVGTVK 413          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: XP_023547405.1 (uncharacterized protein LOC111806365 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 9.300e-65
Identity = 163/431 (37.82%), Postives = 226/431 (52.44%), Query Frame = 0
Query:   48 LRALLEEI-VALMSTDPKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAIPPLEKL------TALASGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPYHVEAADVLSSL-AGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASL---LGSREEGGRDTQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQAIVAVVKAAFGVVRPVK 468
            +R L+  I +A + + P  +L +G W+KLICGAS++D+  ++ L L YTLAGVDCID +A  +VV+A  EG+  A  +          RRPW+M+SVND +DLHFRKA FDP  CP+DC RPCE +CP  AI   E++       A  SG  +G    +RCYGCGRC  VCP   I    Y  +AA     +  G VDALEIHTN    ++F+      +L  ++ +S   LR ++VS P +G+  T + +++   +                     E  LR S L   WQ DGRPMSGDIG+G T   + F   +  S   P            FLQLAGGTN YT + L  +GL    S    L ++E        + G+A+GG+AR  V RV++     S  S +E  P  ++A +  A  +V  VK
Sbjct:   30 VRRLVNRIGIASVQSSPLESLRDGNWIKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIQAARDIVD-------VRRPWVMISVNDDQDLHFRKAEFDPENCPLDCSRPCEIVCPANAISLREEIMNEPSEVASLSGALKGGVITERCYGCGRCSPVCPYDKINLVTYVRDAATTAELIKRGDVDALEIHTNGRQTTSFQ------ELWDKLGDSSKYLRLVAVSLPNIGDL-TISTMKTMFSIM--------------------ESQLRCSNL---WQLDGRPMSGDIGRGATRETIAFAAHLALSNDRP----------PGFLQLAGGTNFYTVDGLKKQGLFQSTSTRKDLMNKELSSSLHALIGGIAYGGYARKIVGRVLSSMQAQSGDSNIEDYPDHLLAALVEALALVGTVK 413          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: CBN77212.1 (4Fe-4S ferredoxin, iron-sulfur binding [Ectocarpus siliculosus])

HSP 1 Score: 256.9 bits (655), Expect = 1.200e-64
Identity = 182/517 (35.20%), Postives = 253/517 (48.94%), Query Frame = 0
Query:   10 RPPLQKPAACRPATPSSALAQAPTGNLPMAFPVEDQKELRALLEEIVALMSTDPKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVN-DQEDLHFRKASFDPARCPVDCPRPCESICPTQAI-------PPLEKLTALASGVKE---GVAHQDRCYGCGRCLTVCPLGLITAHPYHVEAADVLSSLAGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRR-------------SKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLS----------------------------------PASLLGSREEGGRDTQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQAIVAVVKAAFGVVRPVKE 469
            RPPL  P   R    SS       G+   +   E+ +E            +  P  +L  G W KLICGAS++DLP ++ L L YTLAG DCID++A +AV+ AA +GV  A+ VA + +GKP+ R PWLM+SVN D+ED HFRKA+FDP  CP DCPRPCE++CP  A+       PP  +   +   ++    G     RCYGCGRC+ VCP G+I A  Y   +  V+  L  +VD +EIHT   +L++F       + C     S    R ++VSFP +G+  T   + +   + D   G   ER G   EG       +R              + L++WQTDGRPMSGDIG G T + ++  E VL +RALP+      GE QHF+QLAGGTN  TA +L   GL+                                                    V G+A+GG+AR  V R +     G  +  +E  P+ + A ++ A  +VR +K+
Sbjct:   42 RPPL-SPRGKRYQFSSSTTRPLRCGSSAPSDRAEEWREAVLPFLPPDHCRTASPAESLGRGEWFKLICGASFEDLPAIRDLSLVYTLAGADCIDVAAEEAVIEAARDGVIAALGVA-EAIGKPM-RMPWLMMSVNDDEEDPHFRKAAFDPNLCPADCPRPCETVCPADAVVFPDSAPPPAHRAAMVGELLRASAGGGVLGPRCYGCGRCINVCPPGIIRAEKYK-RSPGVVRELLEKVDGVEIHTK-GNLASFR---ELWEECVAAAASRPQFRVVAVSFPDLGD-DTGLAVATMGAVMDS--GPRRERRGGGGEGSEATSARKRGTEFEVAGEQKMGGRALNVWQTDGRPMSGDIGTGATAACIRLAEKVLDTRALPF------GEGQHFVQLAGGTNDRTAHRLREMGLIGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVAYGGYARKTVGRALDRLP-GKGAGRVEDHPEVLSAALREASLLVRGLKQ 540          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: WP_015170846.1 (4Fe-4S ferredoxin [Geitlerinema sp. PCC 7407] >AFY65278.1 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geitlerinema sp. PCC 7407])

HSP 1 Score: 255.4 bits (651), Expect = 3.500e-64
Identity = 165/367 (44.96%), Postives = 205/367 (55.86%), Query Frame = 0
Query:   63 PKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVA--MAVAKQTLGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAIPPLEKLTALASGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPY-HVEAADVLSSLAGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASLLGSREEGGRDTQWVHGLAFGGFAR 427
            P  +L EGRW KLICGAS+Q LP V+ L LAY LAGVDC+D+SA  AVV+AA++G+ VA  +    Q+ G     RPWLMVS+ND ED HFRKA+FDP RCP DC RPCE+ICP QAI   E++    SGV +      RCYGCGRCL VCP+  ITA  Y    AA     L   VDALEIHT V   + F        L   +   VS L+ ++VS P  GE G   +L+S  E+                        +       +WQTDGRPMSGDIG G T +AVK G+ VL +  LP            F+QLAGGTN +T  KL  + LL+P    G   E     Q++ G+A+G +AR
Sbjct:    7 PLRSLREGRWFKLICGASFQHLPAVRNLTLAYALAGVDCVDVSADPAVVSAAQDGLRVAQELIAEAQSRGFGAIARPWLMVSLNDAEDPHFRKATFDPQRCPADCSRPCETICPAQAI-IFERVPDRFSGVID-----QRCYGCGRCLPVCPIQQITARSYVSTPAAIAPLVLQSGVDALEIHTQVGHFADFR------RLWEAVAPWVSQLKLVAVSCP-DGE-GLIDYLRSLYEV------------------------MAPLPCALVWQTDGRPMSGDIGDGATRAAVKLGQKVL-AAGLP-----------GFVQLAGGTNRHTVVKLDQQSLLNPQRAGG---EAAAIGQYISGVAYGSYAR 320          
BLAST of NO04G02670 vs. NCBI_GenBank
Match: XP_008458354.1 (PREDICTED: uncharacterized protein LOC103497790 isoform X1 [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 6.000e-64
Identity = 158/431 (36.66%), Postives = 231/431 (53.60%), Query Frame = 0
Query:   48 LRALLEEI-VALMSTDPKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVDCIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVNDQEDLHFRKASFDPARCPVDCPRPCESICPTQAI----PPLEKLTALA--SGVKEGVAHQDRCYGCGRCLTVCPLGLITAHPYHVEAADVLSSL-AGRVDALEIHTNVSSLSAFEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRYFGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAVKFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPASLL---GSREEGGRDTQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQAIVAVVKAAFGVVRPVK 468
            +R+L+  I +A + +    +L  G WVKLICGAS++D+  ++ L L YTLAGVDCID +A  +VV+A  EG+  A  +    +G    RRPW+M+SVND +DLHFRKA FDP  CP+DC RPCE +CP  AI      L++L+ +A  SGV +G    +RCYGCGRC  VCP   I    Y  +AA  +  +  G VDALEIHTN    + F+      +L  ++ +S   LR ++VS P +G   T + +++   + +                        +   L++WQ DGRPMSGDIG+G T   + F   + R+   P            FLQLAGGTN +T + L  E L    S++    + E        + G+A+GG+AR  V RV++     +  + +E  P +++A +  A  +V  VK
Sbjct:   32 VRSLVNRIGIASVQSSSLQSLQNGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIQAARGI----IG---VRRPWVMISVNDDQDLHFRKAEFDPENCPIDCSRPCEIVCPANAISLQEEALKELSQVAGVSGVLKGGVITERCYGCGRCSPVCPYDKINLVTYVRDAATTVKLIKRGDVDALEIHTNGRQTTYFQ------ELWDKLGDSSKYLRLVAVSLPNIGRDLTVSTMKTMFSIME-----------------------SQLHCLNLWQLDGRPMSGDIGRGATRETIAFAAQLARTNDRP----------PGFLQLAGGTNFHTVDGLKKERLFQSTSIIENSTNEELSSSLNALIGGIAYGGYARKIVGRVLSSMQTQNGDANIEDYPDSLLAALVEALTLVGTVK 416          
The following BLAST results are available for this feature:
BLAST of NO04G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28645.12.100e-10954.854fe-4s ferredoxin iron-sulfur binding domain prote... [more]
WP_036532316.16.400e-6642.324Fe-4S ferredoxin [Neosynechococcus sphagnicola] >... [more]
XP_023006432.11.100e-6537.62uncharacterized protein LOC111499161 isoform X1 [C... [more]
WP_006515917.12.400e-6540.98Fe-S-cluster-containing hydrogenase subunit [Lepto... [more]
WP_023071166.13.200e-6540.204Fe-4S ferredoxin [Leptolyngbya sp. Heron Island J... [more]
XP_022958999.15.400e-6538.05uncharacterized protein LOC111460121 [Cucurbita mo... [more]
XP_023547405.19.300e-6537.82uncharacterized protein LOC111806365 isoform X1 [C... [more]
CBN77212.11.200e-6435.204Fe-4S ferredoxin, iron-sulfur binding [Ectocarpus... [more]
WP_015170846.13.500e-6444.964Fe-4S ferredoxin [Geitlerinema sp. PCC 7407] >AFY... [more]
XP_008458354.16.000e-6436.66PREDICTED: uncharacterized protein LOC103497790 is... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009551NSK009551Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02670.1NO04G02670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578829gene_2038Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100177g10gene1940Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02670.1NO04G02670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02670 ID=NO04G02670|Name=NO04G02670|organism=Nannochloropsis oceanica|type=gene|length=1416bp
ATGGCCTCTGGTAGCCATGCGTTTGTGCGCCCTCCATTACAAAAGCCCGC
TGCATGCAGACCGGCCACACCATCATCCGCGTTAGCACAAGCACCAACCG
GCAACCTTCCAATGGCCTTCCCCGTGGAGGACCAGAAAGAACTCAGGGCA
CTGTTAGAGGAAATCGTAGCGCTGATGAGCACGGATCCAAAAACGGCATT
GGCAGAGGGGCGGTGGGTCAAGCTCATTTGTGGGGCGTCGTATCAAGACC
TACCCCGCGTTCAAGCTCTCTGCCTCGCCTACACATTAGCAGGCGTGGAT
TGCATCGACTTGTCAGCCAGCAAGGCTGTCGTGACAGCCGCGGAAGAAGG
TGTGAATGTAGCCATGGCAGTAGCAAAGCAAACTTTAGGCAAGCCTTTGC
CTCGACGGCCGTGGCTTATGGTAAGTGTTAATGACCAAGAGGATCTGCAC
TTCCGCAAAGCCTCCTTCGACCCTGCTCGATGTCCCGTGGACTGTCCTCG
ACCTTGTGAAAGTATCTGCCCTACACAGGCAATCCCCCCCTTGGAAAAAT
TGACAGCACTTGCATCTGGAGTAAAGGAAGGGGTAGCGCACCAAGATAGG
TGCTATGGTTGTGGTCGTTGCTTGACTGTATGTCCCTTGGGCCTCATTAC
TGCACATCCCTACCATGTGGAAGCGGCTGATGTGCTGAGCTCTTTAGCAG
GGCGTGTAGATGCATTGGAAATTCATACGAATGTCTCTTCGTTATCGGCA
TTCGAGGGGCAGGATCCGTTCGATGATTTGTGTCGGCGCATTCAGGAATC
TGTCTCGACCCTACGTGCGATCTCGGTAAGCTTTCCCTATATGGGCGAGG
CGGGTACCACGGCATTTTTACAAAGCCGGAGCGAACTTTTTGATCGATAT
TTTGGTCGCGACGGCGAGCGGGAAGGAAAGGAAGATGAGGGGGGTAGTGG
AGAGGGAGACCTCCGAAGGTCAAAGCTGCTGCATATTTGGCAGACGGACG
GACGGCCCATGAGCGGGGACATAGGCAAAGGAACGACGCTTTCCGCTGTT
AAATTTGGAGAGATCGTTTTGCGGTCTCGGGCCCTGCCTTGGGCTAGCCC
GCGGCAAGGAGGTGAACAGCAGCATTTTTTGCAGTTGGCCGGTGGGACGA
ACGCTTATACAGCCGAAAAGCTCGCGGCAGAGGGCTTGCTTTCTCCGGCT
TCGTTGTTGGGGAGCAGGGAAGAAGGAGGAAGGGATACCCAGTGGGTGCA
TGGGTTGGCTTTTGGGGGGTTTGCGCGGATGGAGGTGGACAGAGTGATGG
CGGAGTGGGGTTTAGGCTCTGAGTCTTCATTGTTGGAGGCCCCACCACAG
GCAATTGTGGCCGTAGTCAAGGCCGCCTTTGGAGTCGTCCGCCCCGTGAA
GGAACGGATAAAATAG
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protein sequence of NO04G02670.1

>NO04G02670.1-protein ID=NO04G02670.1-protein|Name=NO04G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MASGSHAFVRPPLQKPAACRPATPSSALAQAPTGNLPMAFPVEDQKELRA
LLEEIVALMSTDPKTALAEGRWVKLICGASYQDLPRVQALCLAYTLAGVD
CIDLSASKAVVTAAEEGVNVAMAVAKQTLGKPLPRRPWLMVSVNDQEDLH
FRKASFDPARCPVDCPRPCESICPTQAIPPLEKLTALASGVKEGVAHQDR
CYGCGRCLTVCPLGLITAHPYHVEAADVLSSLAGRVDALEIHTNVSSLSA
FEGQDPFDDLCRRIQESVSTLRAISVSFPYMGEAGTTAFLQSRSELFDRY
FGRDGEREGKEDEGGSGEGDLRRSKLLHIWQTDGRPMSGDIGKGTTLSAV
KFGEIVLRSRALPWASPRQGGEQQHFLQLAGGTNAYTAEKLAAEGLLSPA
SLLGSREEGGRDTQWVHGLAFGGFARMEVDRVMAEWGLGSESSLLEAPPQ
AIVAVVKAAFGVVRPVKERIK*
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Synonyms
Publications