NO04G02550, NO04G02550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02550 vs. NCBI_GenBank
Match: WP_014434857.1 (methyltransferase domain-containing protein [Caldilinea aerophila] >BAM01631.1 hypothetical protein CLDAP_35910 [Caldilinea aerophila DSM 14535 = NBRC 104270]) HSP 1 Score: 150.6 bits (379), Expect = 1.900e-32 Identity = 119/364 (32.69%), Postives = 167/364 (45.88%), Query Frame = 0 Query: 293 ISHHEALELLCLREGLGGRGGRKGLYYHEGVSLDLGRTETMVVVVEEGIAVPIYQKXXXXXXXXXXXXXXXXXXXALVASWEELEDIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657 +SH+ A LL R GG++ + VS DL RT + V + EG+ L +W ++E I E GC+ A+G + +I S T R L P+ G PT+++ MHR++ + P +DT K+ A + ++YG VLDT TGLGYTA+ AR + V TIE D A E+ R NPWS L+ I P+ GD LI +F F +HDPP AL+ LYS AFY QL+RVLR GRLFH++ G+P++K + + VV+RL AGF+RV ++ A GV+A K Sbjct: 10 LSHYAARALLAARSS----GGQRVM-----VSADLNRTRSAVELSAEGV----------------------RFGNGLFLAWAQIERIADD----EAGCYRCSAEGVE--KIQRFSEATQRVYTLYPT---AGAPTLLISGIPMHRIKD------VDPRQDTLNKVRA--LGRIYGHVLDTCTGLGYTALEVAR--YAEHVTTIELDPAVHEIIRQNPWSCALFE-------------------------------TPNITPL---IGDSAALIETFAAESFDLTLHDPPMFALAG---ELYSLAFYRQLFRVLRKGGRLFHYI-GNPESKSGATVTRGVVRRLTEAGFQRVQLRPQAFGVIAFK 285
BLAST of NO04G02550 vs. NCBI_GenBank
Match: OQY24798.1 (spermine synthase [Anaerolineaceae bacterium 4572_32.2]) HSP 1 Score: 150.2 bits (378), Expect = 2.400e-32 Identity = 111/334 (33.23%), Postives = 157/334 (47.01%), Query Frame = 0 Query: 323 VSLDLGRTETMVVVVEEGIAVPIYQKXXXXXXXXXXXXXXXXXXXALVASWEELEDIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657 VSLDLG T + GI +P Q +W++L I + + GCF + + +P +I + S R +L+P+ G PT++L MHR++G I P DT RK++ I + GRVLDT TGLGYT I AAR A +V TIE + A+LE++R NPWS L+ I + GD I +F + FA ++HDPPA AL +LYS AFY QL+RVL+ GRLFH++ G ++K + + ++RL AGF RV + A G+V K Sbjct: 29 VSLDLGLTTAEAAIESNGIRLPDGQ----------------------ALTWKQLGKIA----KSKRGCFVI--ENNRPRKIQSFSKAANRLYSLMPT---TGAPTMLLSGVAMHRIKG------IDPHRDTLRKIETI--TPIVGRVLDTATGLGYTTIEAARTA--EQVTTIEIEPAALEVARLNPWSRALFENPN----------------------------------ITQIVGDSFDEIETFEEETFARIIHDPPAFALGG---DLYSSAFYHQLFRVLQRGGRLFHYI-GDLESKSGRTVARGAIRRLREAGFSRVARRPGAFGLVVYK 283
BLAST of NO04G02550 vs. NCBI_GenBank
Match: OLB42111.1 (spermine synthase [Ktedonobacter sp. 13_2_20CM_53_11] >OLB56366.1 spermine synthase [Ktedonobacter sp. 13_2_20CM_2_56_8] >OLE02593.1 spermine synthase [Ktedonobacter sp. 13_1_20CM_4_53_11]) HSP 1 Score: 147.9 bits (372), Expect = 1.200e-31 Identity = 107/334 (32.04%), Postives = 159/334 (47.60%), Query Frame = 0 Query: 323 VSLDLGRTETMVVVVEEGIAVPIYQKXXXXXXXXXXXXXXXXXXXALVASWEELEDIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657 +S DLGR+ + EG+ P ++ SW++ V + ++ CF + DG+ I S T R +LLP+ +G P++++ F MHR+ I P +DT++K+ I + G VLDT TGLGYTAI AAR A VVTIE D + +++R NPWS +L+ I + GD +++ +F D F ++HDPP +L+ LYS FY QL+RVL+ GRLFH++ G +K SG + K V++RL AGF RV+ + A G+VA K Sbjct: 28 ISPDLGRSTITTTLTSEGLRFPDGER----------------------LSWQD----VVKINKSHVNCFVV-EDGSIK-TIQVFSEDTNRVCSLLPT---RGIPSMLIAGFTMHRI------VDIDPMQDTQKKVATI--APIVGNVLDTATGLGYTAIEAARTA--QHVVTIELDPGAQQIARLNPWSRELFDN----------------------------------PKIEQIMGDAFEVVPTFVDASFDRIIHDPPVFSLAG---ELYSGVFYQQLFRVLKKGGRLFHYI-GDLNSKSSGTVSKGVLRRLHEAGFTRVVRRPEAYGIVAYK 282
BLAST of NO04G02550 vs. NCBI_GenBank
Match: PLS77317.1 (spermine synthase [Chloroflexi bacterium]) HSP 1 Score: 143.7 bits (361), Expect = 2.300e-30 Identity = 99/253 (39.13%), Postives = 130/253 (51.38%), Query Frame = 0 Query: 403 ISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAE 656 I+ S QT L P+L PT+++ MHR++G + P EDT RK+ I + GRVLDT TGLGYTAI AA+ A +EVVTIE D A LE++R NPWS L++ I+ V GD + +F D FA ++HDPP +++ LYS AFY QLYRVL+ GRLFH++G A L +++RL+ AGFKRV A GVVAE Sbjct: 92 IAFFSEQTHWMRTLFPTL---SAPTMLVSGITMHRIKG------VNPLEDTLRKIKTI--APLRGRVLDTATGLGYTAIEAAKTA--TEVVTIELDPAGLEVARLNPWSRALFTD----------------------------------PKIKQVVGDAYAEVPTFADRSFARIIHDPPMFSMAG---ELYSGAFYKQLYRVLKPNGRLFHYIGDLESASNRS-LVPGIIRRLKEAGFKRVTRHNEAFGVVAE 293
BLAST of NO04G02550 vs. NCBI_GenBank
Match: WP_054492319.1 (methyltransferase domain-containing protein [Ardenticatena maritima] >GAP62387.1 hypothetical protein ARMA_0810 [Ardenticatena maritima] >KPL88410.1 spermine synthase [Ardenticatena maritima]) HSP 1 Score: 142.5 bits (358), Expect = 5.100e-30 Identity = 99/256 (38.67%), Postives = 135/256 (52.73%), Query Frame = 0 Query: 402 RISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAP-IRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657 +I S T R +L+P+ K PT+++ MHR++G P DTR K+ A+ V GRVLDT TGLGYTAI AAR A +V+TIE D A+LEM+R NPWS L++ AP I GD ++ + F ++HDPPA +L+ +LYS FY +LYRVLR GRLFH++ G P +K + + V+QRLE AGF+R+ + +A GVVA K Sbjct: 77 KIQTFSPLTNRQYSLMPT---KRAPTMLVSGIPMHRIKG------TDPVADTRAKIRAV--APVKGRVLDTATGLGYTAIEAARTA--EQVITIELDPAALEMARANPWSRALFT-----------------------------------APNIEQRIGDAFDVVETLETETFHRIIHDPPAFSLAG---HLYSTDFYRELYRVLRPGGRLFHYI-GDPNSKSGRNITRGVLQRLEQAGFRRIARRPNAFGVVAWK 280
BLAST of NO04G02550 vs. NCBI_GenBank
Match: WP_054521386.1 (methyltransferase domain-containing protein [Thermanaerothrix daxensis] >KPL83405.1 spermine synthase [Thermanaerothrix daxensis]) HSP 1 Score: 141.4 bits (355), Expect = 1.100e-29 Identity = 117/366 (31.97%), Postives = 169/366 (46.17%), Query Frame = 0 Query: 292 VISHHEALELLCLREGLGGRGGRKGLYYHEGVSLDLGRTETMVVVVEEGIAVPIYQKXXXXXXXXXXXXXXXXXXXALVASWEELE-DIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657 V+SH++A L R G SLDLGRTE V + EG+ +P + E L+ VA+ GC+ L +G RI A S +TGRA +L P+ PT+++ MHR++G P +DT L +++ G VLDT GLGYTAIAAAR A V+TIE D A + ++R NPWS L++ I+++ GD +L+ + G F+ V+HDPP AL+ LY+ FY ++ RVLR RGR+FH++ G P++K + V +RL AGF+R+ A G++AEK Sbjct: 6 VLSHYQAAAWLAAR----------GQVAVLRTSLDLGRTEAEVRLGAEGVELP---------------------------TGEHLDWAAVARVAEDLSGCYRL--EGKDLVRIQAFSSRTGRAYSLYPT---PTAPTLLISGIPMHRIKG------TDPWQDT---LSKVRVANPRGWVLDTCMGLGYTAIAAARTA--ERVLTIELDPAVVALARQNPWSQPLFTDPR----------------------------------IQVLIGDGAELLPALASGVFSCVIHDPPTFALAG---ELYTLEFYREVMRVLRPRGRMFHYI-GDPESKSGRAVTARVRERLRQAGFQRLTPAPRAFGLLAEK 280
BLAST of NO04G02550 vs. NCBI_GenBank
Match: XP_005768783.1 (hypothetical protein EMIHUDRAFT_210727 [Emiliania huxleyi CCMP1516] >EOD16354.1 hypothetical protein EMIHUDRAFT_210727 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 139.8 bits (351), Expect = 3.300e-29 Identity = 105/260 (40.38%), Postives = 129/260 (49.62%), Query Frame = 0 Query: 396 DGTQPWRISAISLQTGRAANLLP-SLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVA 655 D P ++ +S T R A+LLP PPT VLG F MHR +G I PA DT KL A+ K GRVLD TGLGYTA AAAR A VVTIE D A +E+ R NPWS L+ I + GD +++ + +G+F A +HDPPA A+S LYS Y L R+LR G LFH+V G P +K SGRL+K V+QRL AGF A A G+ A Sbjct: 156 DDLAPTKVEGLSELTSRPASLLPLDEASPTPPTAVLGGFNMHRTKG------IDPAGDTDNKLRALGKKG--GRVLDVCTGLGYTACAAARRA---GVVTIELDPAMVELQRANPWSRQLFDD----------------------------------PKITRLLGDATEVLPALPEGYFDAAVHDPPANAMSG---ELYSLEVYRALRRLLRPGGVLFHYV-GDPASKASGRLFKGVLQRLREAGFDAKTTPA-AYGITA 365
BLAST of NO04G02550 vs. NCBI_GenBank
Match: OGQ97648.1 (spermine synthase [Deltaproteobacteria bacterium RIFOXYD12_FULL_57_12]) HSP 1 Score: 138.7 bits (348), Expect = 7.300e-29 Identity = 97/284 (34.15%), Postives = 140/284 (49.30%), Query Frame = 0 Query: 373 WEELEDIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657 WE +++I + E CF + + +I S T RA +L+P+ G PT+++ F MHR++G P +DT K+ AI + G VLDT TGLGYTAI AA+ A +V T+E D A+ E++R NPWS +L+ I GD +L+ SF + F ++HDPP +L+ LY FY +LYRVLR GRLFH++ G+P ++ + V+ RL AGF R + A GVVA+K Sbjct: 30 WEAIKEISS----SENNCFTIKKGRLE--KIVVFSATTNRACSLMPT---AGAPTMLVAGFTMHRIKG------CDPYQDTLAKMKAI--SPLRGVVLDTATGLGYTAIEAAKTA--EQVHTVELDPAAQEVARQNPWSRELFDN----------------------------------PKITQYLGDSFELVDSFSEAMFDRIIHDPPVFSLAG---QLYGGEFYRKLYRVLRKGGRLFHYI-GNPASRAQMSITHGVIARLREAGFARTKLFPQAFGVVADK 256
BLAST of NO04G02550 vs. NCBI_GenBank
Match: KOO22599.1 (methyltransferase type 11 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 136.7 bits (343), Expect = 2.800e-28 Identity = 96/256 (37.50%), Postives = 124/256 (48.44%), Query Frame = 0 Query: 400 PWRISAISLQTGRAANLLPSLFVKG-PPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVA 655 P ++ S T R A+LLP G PPT VLG F MH +G + DT RKL A+ ++ G VLD TGLGYTA AA VVTIE D +EM R NPWS+ L++ A I + GD +++ + G F +HDPP A+S LYS FY+Q+ R LR G LFH+V G P +K SGRL+K + +RL AGF+ V A G+VA Sbjct: 14 PSKVEGFSELTQRPASLLPLDDEGGQPPTTVLGGFNMHSFKG------MSSKGDTERKLGALG-SRLRGTVLDVCTGLGYTACGAAAEPATEHVVTIELDPLMIEMQRANPWSAALFADSSEAHS----------------------------AKITRLLGDATEVLPALPAGAFDCCIHDPPTNAMSG---ELYSEDFYAQIRRCLRPNGALFHYV-GDPSSKASGRLFKGITERLRRAGFESVKTVQEAYGIVA 230
BLAST of NO04G02550 vs. NCBI_GenBank
Match: WP_088863368.1 (methyltransferase domain-containing protein [Thermococcus celer] >ASI99441.1 hypothetical protein A3L02_07670 [Thermococcus celer Vu 13 = JCM 8558]) HSP 1 Score: 136.0 bits (341), Expect = 4.800e-28 Identity = 85/240 (35.42%), Postives = 126/240 (52.50%), Query Frame = 0 Query: 425 PPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEKGEDRKSKK 665 PPT+ + MHR + + P +DTR K++A+K ++ VLDT GLGYTAI A++ + V+T+E D+ +E++R NPWS +L++ ++++QGDV +++ FRDG F V+HDPP +L+ LYS FY +LYRVLR GRLFH+VG K L + V++RL GF V A GVVA K +++S+K Sbjct: 92 PPTIEINGIRMHRTKE------VNPLQDTRNKVNAVKPEE-GETVLDTCMGLGYTAIEASK--RGAYVITVEKDKNVIELARINPWSRELFTG----------------------------------GKVQVIQGDVFEVVRRFRDGSFDVVIHDPPRFSLAG---QLYSGEFYRELYRVLRPGGRLFHYVGNPGKKYRKKDLQRGVMERLREVGFVGVRRVPEALGVVARKPGEKRSEK 285 The following BLAST results are available for this feature:
BLAST of NO04G02550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02550 ID=NO04G02550|Name=NO04G02550|organism=Nannochloropsis oceanica|type=gene|length=3675bpback to top protein sequence of NO04G02550.1 >NO04G02550.1-protein ID=NO04G02550.1-protein|Name=NO04G02550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bpback to top Synonyms
Publications
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