NO04G02550, NO04G02550 (gene) Nannochloropsis oceanica

Overview
NameNO04G02550
Unique NameNO04G02550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3675
Alignment locationchr4:678843..682517 +

Link to JBrowse

Properties
Property NameValue
DescriptionMethyltransferase type 11
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:678843..682517 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Homology
BLAST of NO04G02550 vs. NCBI_GenBank
Match: WP_014434857.1 (methyltransferase domain-containing protein [Caldilinea aerophila] >BAM01631.1 hypothetical protein CLDAP_35910 [Caldilinea aerophila DSM 14535 = NBRC 104270])

HSP 1 Score: 150.6 bits (379), Expect = 1.900e-32
Identity = 119/364 (32.69%), Postives = 167/364 (45.88%), Query Frame = 0
Query:  293 ISHHEALELLCLREGLGGRGGRKGLYYHEGVSLDLGRTETMVVVVEEGIAVPIYQKXXXXXXXXXXXXXXXXXXXALVASWEELEDIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657
            +SH+ A  LL  R      GG++ +     VS DL RT + V +  EG+                           L  +W ++E I       E GC+   A+G +  +I   S  T R   L P+    G PT+++    MHR++       + P +DT  K+ A  + ++YG VLDT TGLGYTA+  AR  +   V TIE D A  E+ R NPWS  L+                                   I P+    GD   LI +F    F   +HDPP  AL+     LYS AFY QL+RVLR  GRLFH++ G+P++K    + + VV+RL  AGF+RV ++  A GV+A K
Sbjct:   10 LSHYAARALLAARSS----GGQRVM-----VSADLNRTRSAVELSAEGV----------------------RFGNGLFLAWAQIERIADD----EAGCYRCSAEGVE--KIQRFSEATQRVYTLYPT---AGAPTLLISGIPMHRIKD------VDPRQDTLNKVRA--LGRIYGHVLDTCTGLGYTALEVAR--YAEHVTTIELDPAVHEIIRQNPWSCALFE-------------------------------TPNITPL---IGDSAALIETFAAESFDLTLHDPPMFALAG---ELYSLAFYRQLFRVLRKGGRLFHYI-GNPESKSGATVTRGVVRRLTEAGFQRVQLRPQAFGVIAFK 285          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: OQY24798.1 (spermine synthase [Anaerolineaceae bacterium 4572_32.2])

HSP 1 Score: 150.2 bits (378), Expect = 2.400e-32
Identity = 111/334 (33.23%), Postives = 157/334 (47.01%), Query Frame = 0
Query:  323 VSLDLGRTETMVVVVEEGIAVPIYQKXXXXXXXXXXXXXXXXXXXALVASWEELEDIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657
            VSLDLG T     +   GI +P  Q                        +W++L  I     + + GCF +  +  +P +I + S    R  +L+P+    G PT++L    MHR++G      I P  DT RK++ I    + GRVLDT TGLGYT I AAR A   +V TIE + A+LE++R NPWS  L+                                      I  + GD    I +F +  FA ++HDPPA AL     +LYS AFY QL+RVL+  GRLFH++ G  ++K    + +  ++RL  AGF RV  +  A G+V  K
Sbjct:   29 VSLDLGLTTAEAAIESNGIRLPDGQ----------------------ALTWKQLGKIA----KSKRGCFVI--ENNRPRKIQSFSKAANRLYSLMPT---TGAPTMLLSGVAMHRIKG------IDPHRDTLRKIETI--TPIVGRVLDTATGLGYTTIEAARTA--EQVTTIEIEPAALEVARLNPWSRALFENPN----------------------------------ITQIVGDSFDEIETFEEETFARIIHDPPAFALGG---DLYSSAFYHQLFRVLQRGGRLFHYI-GDLESKSGRTVARGAIRRLREAGFSRVARRPGAFGLVVYK 283          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: OLB42111.1 (spermine synthase [Ktedonobacter sp. 13_2_20CM_53_11] >OLB56366.1 spermine synthase [Ktedonobacter sp. 13_2_20CM_2_56_8] >OLE02593.1 spermine synthase [Ktedonobacter sp. 13_1_20CM_4_53_11])

HSP 1 Score: 147.9 bits (372), Expect = 1.200e-31
Identity = 107/334 (32.04%), Postives = 159/334 (47.60%), Query Frame = 0
Query:  323 VSLDLGRTETMVVVVEEGIAVPIYQKXXXXXXXXXXXXXXXXXXXALVASWEELEDIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657
            +S DLGR+     +  EG+  P  ++                       SW++    V + ++    CF +  DG+    I   S  T R  +LLP+   +G P++++  F MHR+        I P +DT++K+  I    + G VLDT TGLGYTAI AAR A    VVTIE D  + +++R NPWS +L+                                      I  + GD  +++ +F D  F  ++HDPP  +L+     LYS  FY QL+RVL+  GRLFH++ G   +K SG + K V++RL  AGF RV+ +  A G+VA K
Sbjct:   28 ISPDLGRSTITTTLTSEGLRFPDGER----------------------LSWQD----VVKINKSHVNCFVV-EDGSIK-TIQVFSEDTNRVCSLLPT---RGIPSMLIAGFTMHRI------VDIDPMQDTQKKVATI--APIVGNVLDTATGLGYTAIEAARTA--QHVVTIELDPGAQQIARLNPWSRELFDN----------------------------------PKIEQIMGDAFEVVPTFVDASFDRIIHDPPVFSLAG---ELYSGVFYQQLFRVLKKGGRLFHYI-GDLNSKSSGTVSKGVLRRLHEAGFTRVVRRPEAYGIVAYK 282          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: PLS77317.1 (spermine synthase [Chloroflexi bacterium])

HSP 1 Score: 143.7 bits (361), Expect = 2.300e-30
Identity = 99/253 (39.13%), Postives = 130/253 (51.38%), Query Frame = 0
Query:  403 ISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAE 656
            I+  S QT     L P+L     PT+++    MHR++G      + P EDT RK+  I    + GRVLDT TGLGYTAI AA+ A  +EVVTIE D A LE++R NPWS  L++                                     I+ V GD    + +F D  FA ++HDPP  +++     LYS AFY QLYRVL+  GRLFH++G    A     L   +++RL+ AGFKRV     A GVVAE
Sbjct:   92 IAFFSEQTHWMRTLFPTL---SAPTMLVSGITMHRIKG------VNPLEDTLRKIKTI--APLRGRVLDTATGLGYTAIEAAKTA--TEVVTIELDPAGLEVARLNPWSRALFTD----------------------------------PKIKQVVGDAYAEVPTFADRSFARIIHDPPMFSMAG---ELYSGAFYKQLYRVLKPNGRLFHYIGDLESASNRS-LVPGIIRRLKEAGFKRVTRHNEAFGVVAE 293          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: WP_054492319.1 (methyltransferase domain-containing protein [Ardenticatena maritima] >GAP62387.1 hypothetical protein ARMA_0810 [Ardenticatena maritima] >KPL88410.1 spermine synthase [Ardenticatena maritima])

HSP 1 Score: 142.5 bits (358), Expect = 5.100e-30
Identity = 99/256 (38.67%), Postives = 135/256 (52.73%), Query Frame = 0
Query:  402 RISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAP-IRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657
            +I   S  T R  +L+P+   K  PT+++    MHR++G        P  DTR K+ A+    V GRVLDT TGLGYTAI AAR A   +V+TIE D A+LEM+R NPWS  L++                                   AP I    GD   ++ +     F  ++HDPPA +L+    +LYS  FY +LYRVLR  GRLFH++ G P +K    + + V+QRLE AGF+R+  + +A GVVA K
Sbjct:   77 KIQTFSPLTNRQYSLMPT---KRAPTMLVSGIPMHRIKG------TDPVADTRAKIRAV--APVKGRVLDTATGLGYTAIEAARTA--EQVITIELDPAALEMARANPWSRALFT-----------------------------------APNIEQRIGDAFDVVETLETETFHRIIHDPPAFSLAG---HLYSTDFYRELYRVLRPGGRLFHYI-GDPNSKSGRNITRGVLQRLEQAGFRRIARRPNAFGVVAWK 280          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: WP_054521386.1 (methyltransferase domain-containing protein [Thermanaerothrix daxensis] >KPL83405.1 spermine synthase [Thermanaerothrix daxensis])

HSP 1 Score: 141.4 bits (355), Expect = 1.100e-29
Identity = 117/366 (31.97%), Postives = 169/366 (46.17%), Query Frame = 0
Query:  292 VISHHEALELLCLREGLGGRGGRKGLYYHEGVSLDLGRTETMVVVVEEGIAVPIYQKXXXXXXXXXXXXXXXXXXXALVASWEELE-DIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657
            V+SH++A   L  R          G       SLDLGRTE  V +  EG+ +P                           + E L+   VA+      GC+ L  +G    RI A S +TGRA +L P+      PT+++    MHR++G        P +DT   L  +++    G VLDT  GLGYTAIAAAR A    V+TIE D A + ++R NPWS  L++                                     I+++ GD  +L+ +   G F+ V+HDPP  AL+     LY+  FY ++ RVLR RGR+FH++ G P++K    +   V +RL  AGF+R+     A G++AEK
Sbjct:    6 VLSHYQAAAWLAAR----------GQVAVLRTSLDLGRTEAEVRLGAEGVELP---------------------------TGEHLDWAAVARVAEDLSGCYRL--EGKDLVRIQAFSSRTGRAYSLYPT---PTAPTLLISGIPMHRIKG------TDPWQDT---LSKVRVANPRGWVLDTCMGLGYTAIAAARTA--ERVLTIELDPAVVALARQNPWSQPLFTDPR----------------------------------IQVLIGDGAELLPALASGVFSCVIHDPPTFALAG---ELYTLEFYREVMRVLRPRGRMFHYI-GDPESKSGRAVTARVRERLRQAGFQRLTPAPRAFGLLAEK 280          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: XP_005768783.1 (hypothetical protein EMIHUDRAFT_210727 [Emiliania huxleyi CCMP1516] >EOD16354.1 hypothetical protein EMIHUDRAFT_210727 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 139.8 bits (351), Expect = 3.300e-29
Identity = 105/260 (40.38%), Postives = 129/260 (49.62%), Query Frame = 0
Query:  396 DGTQPWRISAISLQTGRAANLLP-SLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVA 655
            D   P ++  +S  T R A+LLP       PPT VLG F MHR +G      I PA DT  KL A+  K   GRVLD  TGLGYTA AAAR A    VVTIE D A +E+ R NPWS  L+                                      I  + GD  +++ +  +G+F A +HDPPA A+S     LYS   Y  L R+LR  G LFH+V G P +K SGRL+K V+QRL  AGF      A A G+ A
Sbjct:  156 DDLAPTKVEGLSELTSRPASLLPLDEASPTPPTAVLGGFNMHRTKG------IDPAGDTDNKLRALGKKG--GRVLDVCTGLGYTACAAARRA---GVVTIELDPAMVELQRANPWSRQLFDD----------------------------------PKITRLLGDATEVLPALPEGYFDAAVHDPPANAMSG---ELYSLEVYRALRRLLRPGGVLFHYV-GDPASKASGRLFKGVLQRLREAGFDAKTTPA-AYGITA 365          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: OGQ97648.1 (spermine synthase [Deltaproteobacteria bacterium RIFOXYD12_FULL_57_12])

HSP 1 Score: 138.7 bits (348), Expect = 7.300e-29
Identity = 97/284 (34.15%), Postives = 140/284 (49.30%), Query Frame = 0
Query:  373 WEELEDIVAQAHRGEPGCFALYADGTQPWRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEK 657
            WE +++I +     E  CF +     +  +I   S  T RA +L+P+    G PT+++  F MHR++G        P +DT  K+ AI    + G VLDT TGLGYTAI AA+ A   +V T+E D A+ E++R NPWS +L+                                      I    GD  +L+ SF +  F  ++HDPP  +L+     LY   FY +LYRVLR  GRLFH++ G+P ++    +   V+ RL  AGF R  +   A GVVA+K
Sbjct:   30 WEAIKEISS----SENNCFTIKKGRLE--KIVVFSATTNRACSLMPT---AGAPTMLVAGFTMHRIKG------CDPYQDTLAKMKAI--SPLRGVVLDTATGLGYTAIEAAKTA--EQVHTVELDPAAQEVARQNPWSRELFDN----------------------------------PKITQYLGDSFELVDSFSEAMFDRIIHDPPVFSLAG---QLYGGEFYRKLYRVLRKGGRLFHYI-GNPASRAQMSITHGVIARLREAGFARTKLFPQAFGVVADK 256          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: KOO22599.1 (methyltransferase type 11 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 136.7 bits (343), Expect = 2.800e-28
Identity = 96/256 (37.50%), Postives = 124/256 (48.44%), Query Frame = 0
Query:  400 PWRISAISLQTGRAANLLPSLFVKG-PPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVA 655
            P ++   S  T R A+LLP     G PPT VLG F MH  +G      +    DT RKL A+   ++ G VLD  TGLGYTA  AA       VVTIE D   +EM R NPWS+ L++                                   A I  + GD  +++ +   G F   +HDPP  A+S     LYS  FY+Q+ R LR  G LFH+V G P +K SGRL+K + +RL  AGF+ V     A G+VA
Sbjct:   14 PSKVEGFSELTQRPASLLPLDDEGGQPPTTVLGGFNMHSFKG------MSSKGDTERKLGALG-SRLRGTVLDVCTGLGYTACGAAAEPATEHVVTIELDPLMIEMQRANPWSAALFADSSEAHS----------------------------AKITRLLGDATEVLPALPAGAFDCCIHDPPTNAMSG---ELYSEDFYAQIRRCLRPNGALFHYV-GDPSSKASGRLFKGITERLRRAGFESVKTVQEAYGIVA 230          
BLAST of NO04G02550 vs. NCBI_GenBank
Match: WP_088863368.1 (methyltransferase domain-containing protein [Thermococcus celer] >ASI99441.1 hypothetical protein A3L02_07670 [Thermococcus celer Vu 13 = JCM 8558])

HSP 1 Score: 136.0 bits (341), Expect = 4.800e-28
Identity = 85/240 (35.42%), Postives = 126/240 (52.50%), Query Frame = 0
Query:  425 PPTVVLGSFLMHRLEGPRPGTFIGPAEDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQASLEMSRYNPWSSDLYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQLYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQGVVAEKGEDRKSKK 665
            PPT+ +    MHR +       + P +DTR K++A+K ++    VLDT  GLGYTAI A++    + V+T+E D+  +E++R NPWS +L++                                     ++++QGDV +++  FRDG F  V+HDPP  +L+     LYS  FY +LYRVLR  GRLFH+VG   K      L + V++RL   GF  V     A GVVA K  +++S+K
Sbjct:   92 PPTIEINGIRMHRTKE------VNPLQDTRNKVNAVKPEE-GETVLDTCMGLGYTAIEASK--RGAYVITVEKDKNVIELARINPWSRELFTG----------------------------------GKVQVIQGDVFEVVRRFRDGSFDVVIHDPPRFSLAG---QLYSGEFYRELYRVLRPGGRLFHYVGNPGKKYRKKDLQRGVMERLREVGFVGVRRVPEALGVVARKPGEKRSEK 285          
The following BLAST results are available for this feature:
BLAST of NO04G02550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_014434857.11.900e-3232.69methyltransferase domain-containing protein [Caldi... [more]
OQY24798.12.400e-3233.23spermine synthase [Anaerolineaceae bacterium 4572_... [more]
OLB42111.11.200e-3132.04spermine synthase [Ktedonobacter sp. 13_2_20CM_53_... [more]
PLS77317.12.300e-3039.13spermine synthase [Chloroflexi bacterium][more]
WP_054492319.15.100e-3038.67methyltransferase domain-containing protein [Arden... [more]
WP_054521386.11.100e-2931.97methyltransferase domain-containing protein [Therm... [more]
XP_005768783.13.300e-2940.38hypothetical protein EMIHUDRAFT_210727 [Emiliania ... [more]
OGQ97648.17.300e-2934.15spermine synthase [Deltaproteobacteria bacterium R... [more]
KOO22599.12.800e-2837.50methyltransferase type 11 [Chrysochromulina sp. CC... [more]
WP_088863368.14.800e-2835.42methyltransferase domain-containing protein [Therm... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009565NSK009565Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02550.1NO04G02550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|291647gene_2025Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100182g3gene1951Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02550.1NO04G02550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02550 ID=NO04G02550|Name=NO04G02550|organism=Nannochloropsis oceanica|type=gene|length=3675bp
TGTCCGCTTTGCCTCGTTTGGTCGTCGAATGTAAAATGTTCCCTTCGGGA
GGCCCATGTTGTCATGTTCTTCCTTTTCGCGGGCTCCCTGTTGGCAGTAA
GGTCAGTCAGTCGGAATGCCTTGCAATAAAGCGGTCGAAACACGCTGAAA
TTAATATGCCCTGATCAAAGAACGAATACCACGTTATCTCTTTTCGTGTT
AGAAAGCCCATTCCGCCCCATAGCGTCGCCTGGACAGCGAATTGCCGCTC
GTTCACACTTGCACTGATCTTTTTCTGCCAGGCTGCGGCATCAGCAGCAG
CGGCTGCGGCATCAGCAGCAGCGGCTGCGGCATCTAGTGACTGTGTTGGT
TGCATGTCTCTCCTGTCCATTAATGTGTGGGTGTACTAATGTGTGGGTGT
ACTACTTCGCGTTCAGGGGAAAGCCGTAGGGAGGAACTATGCTGATCGCC
AGCGGGCTGAAGAGCGAACCTAACATTCCTCTGTCACACGACCACCAAAT
ACACGCCACGCTTCACCCTCGTGCACCACACAACCCGCACATAGACACAG
GAGGGTCCCTGTTGCCAAGGGCGGCATCTGGATCCGCTCGTCCCGTGTCA
GCAGTCCCCACCGCAGCAACAACGCCTCCTCGCTTTTCGTGTGCCAGCGC
AGCGAAAGAGGCGCAACAGACACGAACAGAAATGATGGTCAAGCCCTGCA
GGAGAAGACTAGCGGCGGCGGCCCCGCGCCTGGTCTGCGTCATGCTTATC
CTTCATCTACATGTCCTCCTCGGTGAGGCTTTTCAGGGACCTGTAAGCAA
GCGGCAGCATTTCCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAACCCCATCTTCTTTCGTGCGGGGTCGTGCAGAAGACGGATCAA
TTCATGACCATCGCAGCCGCCGGCTCAAGCACCAGCACTACCGAAGCGCA
TACAGCAGGGAGCACTTCCACCATGGCTCCGCCTGTGGCACCCACCACTA
CCACCAAGTCTTCTTCCCCCCAACACTCGTCCACATCATCGTCCGCCTCC
TCCTCCCCCTCCTCTTCCTCCTCCTCCTCCTCCAGGCCCCTCCAAGGAAC
CTTGTTGGAGACCAGGCCATACCTACCATCTCAATTTTTAACACCGCCTT
TGTCCACCGCCGAATCCTCCCGTTTGGCCGTCACGGCTGCAATACACAAG
CACCAGAAGAAGAAGGCAGTACCCCGCCATATCAATGCTTCACCCATTCA
AGAAGAGGTGACAGAACGGAAAGAGGAGGGAGGTAAAGCAAGGGAATTCG
TGACTATTGGTGTCATCAGTCATCACGAGGCTCTGGAGCTGCTATGTCTG
CGGGAGGGCCTAGGGGGGAGGGGGGGAAGGAAGGGGCTCTACTACCACGA
AGGCGTCTCCCTCGACTTGGGCCGAACCGAAACCATGGTGGTGGTGGTCG
AAGAAGGCATTGCTGTACCAATCTATCAAAAAGAGAATCATCTGTATTAT
CACCACCACAACCCTCGAGGAGGGGGAGGACGACAACCGGCGCTGGTTGC
CAGCTGGGAGGAACTCGAAGACATAGTCGCCCAAGCGCACCGAGGCGAGC
CGGGATGCTTTGCCCTTTACGCGGACGGCACTCAGCCGTGGAGAATAAGC
GCGATAAGTTTACAGACTGGACGGGCGGCCAATTTGTTGCCGTCGTTGTT
CGTGAAAGGGCCCCCAACAGTCGTCCTGGGGAGCTTTTTAATGCACCGGC
TGGAGGGGCCGAGGCCTGGGACCTTCATAGGGCCGGCAGAGGATACGAGG
AGGAAGTTGGACGCGATAAAGATGAAGAAGGTGTACGGAAGAGTGCTAGA
TACGACGACGGGTTTGGGGTACACGGCCATTGCGGCGGCGAGGTGTGCGC
ATGTGTCGGAGGTGGTGACGATTGAGGCGGACCAGGCCTCGCTGGAGATG
AGCCGTTACAACCCGTGGAGTAGTGATTTGTATTCGTCCTCCTCATCGTC
GTTGTCATCATCGTATTCGTCGTCGATCTCGTCTTCGAGGAGGGGGGTGG
GGGAAAACGATGAGGACGACGACGAGGATGAGGATGGCATTGCTCCCATT
CGGCTCGTCCAAGGCGACGTCTGTCAGCTCATTCACTCCTTCCGCGATGG
GCATTTTGCGGCTGTCATGCACGACCCCCCAGCAATGGCCCTGTCGCGCG
CCACCTTCAATCTGTACTCTCCTGCGTTCTATTCGCAGCTGTACCGGGTG
CTGAGGTGGAGGGGCCGGCTCTTTCATTTTGTGGGGGGGCATCCCAAGGC
CAAGGAAAGTGGGAGGCTGTACAAGACTGTAGTCCAGCGACTGGAGGCCG
CTGGTTTCAAAAGAGTGATGATTCAAGCGTCAGCTCAGGGAGTCGTTGCG
GAGAAAGGGGAAGATCGGAAGAGCAAGAAGATCTTGCATGCCCGAGGTGG
AGGAGGAGGGGGGGAGGGAGGGAAGGAGGGAGGAAAGGCCCAGCGGTTGA
GGGCCGAGATGGGAGTGATATTGGGGTTGGAGCACATGGTGGCGGCGGAG
AAGGCGGCACAGGAAGAGGGTGGCAGCGTAGAGGACTATGGGCAAGGGGA
TTAGCGAGGGATGTTGGAGAGGGAAAGGAAGACGGAGGGGAAGGAGTAAG
AGGAGGGAGGCAGGCAGGCTGGCAGGCAGGGACTGGGAGGGAGATGGTGA
AGAAGGTTTTGTAACATGTGTGTAGAGCCTGGGTCGATCATTGTAAAAAT
AAAGTCGAGTTTTGAGTCTCTCGCTGGTGGGGAGCAGTAGCAGCAGCAGC
AGCAATATAGGTTGTAAGTTAAGAGGGGGGACGGAAGGGAAGGAGAGAAG
GAAGACGAGTGGGAGAAGAGGAATATTGCTTGTGGTTGTGTCATGTTGGT
GGAGCGATGTGGGGTTGAAGTGGATTTTATGCATTTAGAGGGAAGAAAGA
AGAGGGAAAGGAAAGAGAGGTAGCCAGATAGACAGACGGAGCAAGAGACA
GGAAGTGCGACAGGAACACAGATGGAGACTGAGAGTGGCTGCGGTGTGCC
GACGACCATGACCATGACGACGACGATAATGGATGAGTGGCACTGGAATA
CTGCTTCTTCGGGCAAGACAAACAGGCCTCCACGCGTAACACCCCCAAAG
AAAGTACTTTGACAGACTCGGTCACAATCACCAGCAACAGCAGCAGCACC
ACCAAGAGCCACCGGCAGCAACAATTTTTTCCGTGCTTTTTCCCCCCAGA
ATATTTCCCTTTCATCACAAAGACCCTTCGCCTGATGAGGAAGAACCGGT
CGACGACTCCGTCTCAACCATGACCTTGCTGATGCCACAGCCGCACGCAA
GAATGTAGTACCCCCACTTTATCCCTCACCCTCTCCTATAGGTCCACCAG
TACGAGCTCACACGATGTTAAGTGTTTGTGTGTGTCCAGAAAGCGCGCGC
CTTTAAGGTAGGGACAGAGGCGAAGGGGGTAAAAGGGACGGGGGGGGGCG
GGCGTGGGGAACTTGACGACAGCCACGACAAGATTTGAGGGATGGTGAAA
CCAACACTGAAGGGATATTGATGTAAAGGAAGAGGGAAAAGAATACGATC
AAGAACAAGCTGTGAACGAGAATATGAACAAGAACATGGAGGATCAATAA
ATAGATCAATTAGTAAGCGGCGGAG
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protein sequence of NO04G02550.1

>NO04G02550.1-protein ID=NO04G02550.1-protein|Name=NO04G02550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bp
MLIASGLKSEPNIPLSHDHQIHATLHPRAPHNPHIDTGGSLLPRAASGSA
RPVSAVPTAATTPPRFSCASAAKEAQQTRTEMMVKPCRRRLAAAAPRLVC
VMLILHLHVLLGEAFQGPVSKRQHFRQQQQQQQQQQQQQQPHLLSCGVVQ
KTDQFMTIAAAGSSTSTTEAHTAGSTSTMAPPVAPTTTTKSSSPQHSSTS
SSASSSPSSSSSSSSRPLQGTLLETRPYLPSQFLTPPLSTAESSRLAVTA
AIHKHQKKKAVPRHINASPIQEEVTERKEEGGKAREFVTIGVISHHEALE
LLCLREGLGGRGGRKGLYYHEGVSLDLGRTETMVVVVEEGIAVPIYQKEN
HLYYHHHNPRGGGGRQPALVASWEELEDIVAQAHRGEPGCFALYADGTQP
WRISAISLQTGRAANLLPSLFVKGPPTVVLGSFLMHRLEGPRPGTFIGPA
EDTRRKLDAIKMKKVYGRVLDTTTGLGYTAIAAARCAHVSEVVTIEADQA
SLEMSRYNPWSSDLYSSSSSSLSSSYSSSISSSRRGVGENDEDDDEDEDG
IAPIRLVQGDVCQLIHSFRDGHFAAVMHDPPAMALSRATFNLYSPAFYSQ
LYRVLRWRGRLFHFVGGHPKAKESGRLYKTVVQRLEAAGFKRVMIQASAQ
GVVAEKGEDRKSKKILHARGGGGGGEGGKEGGKAQRLRAEMGVILGLEHM
VAAEKAAQEEGGSVEDYGQGD*
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Synonyms
Publications