NO04G02500, NO04G02500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02500 vs. NCBI_GenBank
Match: XP_012213517.1 (hypothetical protein SPRG_18685 [Saprolegnia parasitica CBS 223.65] >KDO15776.1 hypothetical protein SPRG_18685 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 103.2 bits (256), Expect = 4.300e-18 Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = 0 Query: 1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLAR 119 M+++EF +L +R HG HS +GRGLYALQL+ W F K QL ++ ++M+T + VFAFL LPP+ I D+ AK+TR Y L +AR+ AFYAPFN+ L +ML R Sbjct: 107 MSFDEFDRVYLQTRLSFTHGGHSFIGRGLYALQLKGWFEAF--PKDQLHIVNMDDMKTSTGLHAVMQDVFAFLELPPYTIEDSSAKNTRAYGALHPDTRARLQAFYAPFNEALADMLGR 223
BLAST of NO04G02500 vs. NCBI_GenBank
Match: XP_012201945.1 (hypothetical protein SPRG_20332 [Saprolegnia parasitica CBS 223.65] >KDO27481.1 hypothetical protein SPRG_20332 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 103.2 bits (256), Expect = 4.300e-18 Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = 0 Query: 1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLAR 119 M++EEF +L +R HG HS +GRGLYALQL+ W F K QL ++ ++M+T + VFAFL LPP+ I D+ AK+TR Y L +AR+ AFYAPFN+ L ++L R Sbjct: 399 MSFEEFDRVYLQTRLSFTHGGHSFIGRGLYALQLKGWFEAF--PKDQLHIVNMDDMKTSTGLHAVMQDVFAFLELPPYTIEDSSAKNTRAYGALHPDTRARLQAFYAPFNEALADLLGR 515
BLAST of NO04G02500 vs. NCBI_GenBank
Match: CBN77079.1 (Sulfotransferase [Ectocarpus siliculosus]) HSP 1 Score: 102.8 bits (255), Expect = 5.600e-18 Identity = 52/115 (45.22%), Postives = 76/115 (66.09%), Query Frame = 0 Query: 5 EFKTRFLASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEE-MRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLAR 119 +F +L++RP G+G HSLLGRGLYALQLQPW+ FG D Q+ VLF EE +++ ++ Q + VF +GLPP + D K+ R Y +DE ++ R+ FYAP++ L ++L R Sbjct: 430 DFARDYLSTRPNGYGGHSLLGRGLYALQLQPWLEAFGRD--QIKVLFLEEVVKSEDSLQEAMDGVFEHVGLPPSPVEDKAPKNHRDYPPMDEGVRRRLRDFYAPYDAALRQLLRR 542
BLAST of NO04G02500 vs. NCBI_GenBank
Match: XP_008613676.1 (hypothetical protein SDRG_09512 [Saprolegnia diclina VS20] >EQC32990.1 hypothetical protein SDRG_09512 [Saprolegnia diclina VS20]) HSP 1 Score: 102.4 bits (254), Expect = 7.300e-18 Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 0 Query: 1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLAR 119 M+++EF +L +R HG HS +GRGLYALQLQ W F K QL ++ ++M+T + VFAFL LPP+ I D+ AK+TR Y L +AR+ AFYAPFN L ML R Sbjct: 411 MSFDEFDRVYLQTRLAFQHGGHSFIGRGLYALQLQGWFEAF--PKDQLHIVNMDDMKTSSGLHAVMKDVFAFLELPPYVIEDSSAKNTRAYGALHPDTRARLEAFYAPFNQALATMLGR 527
BLAST of NO04G02500 vs. NCBI_GenBank
Match: GBG26797.1 (Heparan sulfate glucosamine 3-O-sulfotransferase 4 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 97.8 bits (242), Expect = 1.800e-16 Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 0 Query: 4 EEFKTRFLASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLAR 119 + F+ +L + P+ HG HS +GRG YALQ++ W+ F ++ LF R Q ++ +VF FLGLPP I DT K+TR Y +D + +AR+ A YAP ND+L +L + Sbjct: 590 DRFEEEYLCTAPMTHGGHSYVGRGFYALQIERWLQVFPREQ----FLFLRLDRLAANTQAEMARVFRFLGLPPARIADTKPKNTRAYSPIDAETRARLEAIYAPHNDRLVRLLGK 700
BLAST of NO04G02500 vs. NCBI_GenBank
Match: XP_008617938.1 (hypothetical protein SDRG_13619 [Saprolegnia diclina VS20] >EQC28541.1 hypothetical protein SDRG_13619 [Saprolegnia diclina VS20]) HSP 1 Score: 97.1 bits (240), Expect = 3.100e-16 Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 0 Query: 2 TYEEFKTRFLASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKL 113 T+E + R P HG+HS +GRGLYALQLQ W F + Q ++L + ++T E+ QT V + FLGLPPH + DT A +TR Y+ + +A++ AFYAPFN L Sbjct: 532 TFEAYVDRL----PKTHGAHSYIGRGLYALQLQIWFQHF--PRNQFLLLNLDALKTPESTQTTVNEALTFLGLPPHVLQDTAAHNTRAYDPMPAAAKAKLEAFYAPFNAHL 636
BLAST of NO04G02500 vs. NCBI_GenBank
Match: OQR81518.1 (hypothetical protein THRCLA_11659 [Thraustotheca clavata]) HSP 1 Score: 95.5 bits (236), Expect = 8.900e-16 Identity = 47/119 (39.50%), Postives = 74/119 (62.18%), Query Frame = 0 Query: 1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLAR 119 M++E+F +L SR HG HS +GRGLYALQL W + F + Q+ ++ ++M+T E T + +FAFL LP ++I D AK+TR Y ++ + R+ FYAP+N KL +++ + Sbjct: 409 MSFEDFDEVYLKSRVSYTHGGHSFIGRGLYALQLLGWYSSF--PREQIRIVNMDDMKTSEGLHTVMKDIFAFLELPHYEIEDVSAKNTRHYSPINPATRERLQDFYAPYNAKLAQLVGQ 525
BLAST of NO04G02500 vs. NCBI_GenBank
Match: OQR99461.1 (hypothetical protein ACHHYP_06074 [Achlya hypogyna]) HSP 1 Score: 95.5 bits (236), Expect = 8.900e-16 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 9 RFLASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKL 113 R++ + P HG+HS LGRGLYALQLQ W F + Q +++ +E+ T + Q V K AFLGL PH + DT ++TR+Y + +A++ AFYAPFN L Sbjct: 531 RYVDALPKTHGAHSYLGRGLYALQLQVWFEHF--PRNQFLLVNLDELSTPASTQMTVNKALAFLGLEPHTLADTAPQNTREYTPMPAAARAKLTAFYAPFNAHL 632
BLAST of NO04G02500 vs. NCBI_GenBank
Match: XP_012195787.1 (hypothetical protein SPRG_01829 [Saprolegnia parasitica CBS 223.65] >KDO33013.1 hypothetical protein SPRG_01829 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 94.7 bits (234), Expect = 1.500e-15 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 0 Query: 15 PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKL 113 P HG+HS +GRGLYALQLQ W F + Q ++L + ++T E+ Q V + AFLGLPPH + DT A +TR Y+ + +A++ AFYAPFN L Sbjct: 543 PKTHGAHSYIGRGLYALQLQIWFQHF--PRHQFLLLNLDALKTPESTQATVNEALAFLGLPPHMLQDTAAHNTRAYDPMPATAKAKLEAFYAPFNAHL 638
BLAST of NO04G02500 vs. NCBI_GenBank
Match: OQR86918.1 (hypothetical protein THRCLA_10508 [Thraustotheca clavata]) HSP 1 Score: 94.4 bits (233), Expect = 2.000e-15 Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 0 Query: 10 FLASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKL 113 + ++ P HG+HS +GRGLYALQLQ W F D Q ++L + M + E Q V + F+FLGLPPH + D+ ++TR Y+ + E ++ ++ AFYAPFN L Sbjct: 553 YASALPKTHGAHSYVGRGLYALQLQVWFQLFPRD--QFLLLNIDAMNSHEKTQNVVNQAFSFLGLPPHQLEDSTPQNTRAYQAMQEPVRKQLEAFYAPFNAHL 653 The following BLAST results are available for this feature:
BLAST of NO04G02500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02500 ID=NO04G02500|Name=NO04G02500|organism=Nannochloropsis oceanica|type=gene|length=3533bpback to top protein sequence of NO04G02500.1 >NO04G02500.1-protein ID=NO04G02500.1-protein|Name=NO04G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=900bpback to top Synonyms
Publications
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