NO04G02500, NO04G02500 (gene) Nannochloropsis oceanica

Overview
NameNO04G02500
Unique NameNO04G02500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3533
Alignment locationchr4:667980..671512 +

Link to JBrowse

Properties
Property NameValue
DescriptionAuxin efflux carrier
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:667980..671512 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR004776Auxin_eff
Homology
BLAST of NO04G02500 vs. NCBI_GenBank
Match: EWM28636.1 (auxin efflux carrier [Nannochloropsis gaditana])

HSP 1 Score: 625.5 bits (1612), Expect = 2.500e-175
Identity = 390/721 (54.09%), Postives = 459/721 (63.66%), Query Frame = 0
Query:  178 LIEMPTWEQLQESLSASANATSKIVFLVLIGVAATAHGVFNDQGVSDLGRLVYHVTLPALLFVNIISEVTLARLLVLWKLPAMALLHVSSGYLLAKCLTSFFRIRGIGNKAVTLSLMFGNVGSLAIAVVDTLCADEPLASEVGPTCALRGVEYISFYLITQTILMFTWAEEIVKDGTXXXXXXXXXXXXXXXXXLLHSFKEXXXXDLIRGTFAGGEGDAGEVESPTYATPVTIPGAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRFHTSDSDADDSRHGRIAPSSDGGGGTPRLRRLHSQSQILDEEDINSILSRYAVESRPRLDAEVSGGHGLGGLVGLAGSLSSTHLPSFSTSPALFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGRPGATTYQTTGISNSNSKSIRSSGDISNALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIPISTLTHSVP-PLFSPSATLGLGGTSPPPPTNTSYLASFKNGALVVLSRMVANPSIRAALLAFFLGLIPPIKALFVSSADRPNPPLGAFLGAMQILGQAQVPCSMLMLSGSGTIRYLNDKAAQNNVETSFAFSPKVIFCIILGRVLLFPLVGLFWWWAGYGLGLFVGTPVLSLVVLLDAAVPTAQNVVMLILVHGKAEHGHALAYVILWQYALCIPMLILNVTLYLAIIRTVY 898
            + E+PT + ++++LSASANAT KIVFLVLIGV ATA GVFNDQGVSDLGRLVYHVTLPALLFVNIISEVT+ARL+VLWKLP +AL+HV SG++LA CLT+FFRIRGIG KAVTL LMFGNVGSL+IA++DTLCADEPLAS VGP C LRGVEYISFYLITQTILMFTWAEEIVKD     XXXXXXX                  ++++ T+         +E   ++  + +PGAA+                                     + S  D    G    +S+ G GTPRLRRL S SQILD+EDINSILSRY VESRP+++ E SG   LG  + L GS+SS +LPS S+SP+LFR                                        MGR  + +        + + S+ S+G  + A+                                                I   +L+ + P P+ SP  ++       PPPT  S +     G L+V+SR+ ANPSIRAAL AFFLGL PPIKALFV + DRP+PPLGAFLGAMQILGQAQVPCSMLMLSGSGTIRYLNDKAAQNN   SFAF P+VIFCIILGR+LLFPL+GL  WW GY LGLF GTPVLSLV LLDAAVP+AQNVVMLILVHGK+EHGHALAYVILWQYALCIP+LILNVT+YL+IIR+VY
Sbjct:    1 MFELPTRDLIEDALSASANATCKIVFLVLIGVVATAQGVFNDQGVSDLGRLVYHVTLPALLFVNIISEVTVARLMVLWKLPVLALVHVCSGFILATCLTTFFRIRGIGKKAVTLCLMFGNVGSLSIAMIDTLCADEPLASGVGPDCDLRGVEYISFYLITQTILMFTWAEEIVKDQKGDEXXXXXXXAL------------EGEDEVMKSTYFQDADQERALECRPHSASMNVPGAAARLESEGSDQQVPPALAAGPSSALSRRRGSV------ATPSRTDKYDSGIRTSASELGPGTPRLRRLQSHSQILDQEDINSILSRYPVESRPQMETEQSGLGLLGSSLSLVGSMSSPYLPSLSSSPSLFR----------------LRGSRTDTTHPQLHPEESAERERLMGRRRSGSIGFGSTHQAGNSSV-SAGKGNGAIPSEGLVPPRISVKGLEPSRSH---------------------------ISSQSLSSTPPLPVHSPEPSI----LVVPPPTCYSRILDVWVGFLLVISRLAANPSIRAALTAFFLGLFPPIKALFVPTVDRPDPPLGAFLGAMQILGQAQVPCSMLMLSGSGTIRYLNDKAAQNNATASFAFKPRVIFCIILGRILLFPLIGLGAWWGGYTLGLFEGTPVLSLVALLDAAVPSAQNVVMLILVHGKSEHGHALAYVILWQYALCIPVLILNVTIYLSIIRSVY 655          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: EWM28634.1 (sulfotransferase [Nannochloropsis gaditana])

HSP 1 Score: 164.1 bits (414), Expect = 2.000e-36
Identity = 77/116 (66.38%), Postives = 94/116 (81.03%), Query Frame = 0
Query:    1 MTYEEFKTRFLASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEML 117
            M Y+EFK  +L+SRPLGHGSHSLLGRGLYALQLQPW+  FG D  QLMV+F E+M +  A Q Q+GKVF FLGLPPH IIDT AK+TR Y  +DE+ +AR++AFYAPFN +LF++L
Sbjct:  471 MNYQEFKDGYLSSRPLGHGSHSLLGRGLYALQLQPWLEAFGRD--QLMVMFMEDMASHNAVQAQLGKVFDFLGLPPHSIIDTHAKNTRAYTPMDERTKARLSAFYAPFNQQLFQIL 584          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: XP_002901874.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY57264.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 107.5 bits (267), Expect = 2.300e-19
Identity = 52/122 (42.62%), Postives = 80/122 (65.57%), Query Frame = 0
Query:    1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLARPRG 122
            M++EEF  + +  R    HG+HS + RGLYALQL  W+  +   K  +++L  +E +T E   T + KVF FL LP H I DT AK+TR+Y+ +D+ ++A++ AFYAP+N++L+ +L R  G
Sbjct:  380 MSFEEFDDKVMHKRLDFDHGAHSFVARGLYALQLSGWIEAY--SKENVLLLTLDEFKTTENLYTTMDKVFNFLDLPYHRIKDTSAKNTRKYDPIDDAVRAKLTAFYAPYNERLYTLLERNMG 499          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: GAY01522.1 (Hypothetical protein PINS_009351 [Pythium insidiosum])

HSP 1 Score: 106.3 bits (264), Expect = 5.000e-19
Identity = 54/122 (44.26%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MTYEEFKTRFLASRPL-GHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLARPRG 122
            M+++ F  R L+   +  HG HS L RGLYALQL+ W   FG  +  ++VL  + M+T E   + + +VF FL LPPH I D  AK+TR+YE ++++ +A++A FYAP+N KL E+L R  G
Sbjct:  412 MSFDAFDERVLSKAVVPDHGGHSFLTRGLYALQLKGWFDAFG--RENVLVLTLDXMKTTEGLHSTMDRVFNFLELPPHRIEDASAKNTRRYEPMNDETRAKLATFYAPYNAKLNELLGRDLG 531          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: XP_008891572.1 (hypothetical protein PPTG_02268 [Phytophthora parasitica INRA-310] >ETI50277.1 hypothetical protein F443_06131 [Phytophthora parasitica P1569] >ETK90151.1 hypothetical protein L915_06012 [Phytophthora parasitica] >ETL43561.1 hypothetical protein L916_05945 [Phytophthora parasitica] >ETL96735.1 hypothetical protein L917_05834 [Phytophthora parasitica] >ETN22297.1 hypothetical protein PPTG_02268 [Phytophthora parasitica INRA-310] >ETP20042.1 hypothetical protein F441_06142 [Phytophthora parasitica CJ01A1] >ETP48002.1 hypothetical protein F442_06168 [Phytophthora parasitica P10297])

HSP 1 Score: 105.5 bits (262), Expect = 8.600e-19
Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLARPRG 122
            M +EEF  + +  R    HG+HS + RGLYALQL  W+  +G  K  +++L  +E +T E     + KVF FL LP H I DT AK+TR+Y+ +++ ++A++ AFYAP+N+KL+ +L R  G
Sbjct:  408 MCFEEFDEKIMHKRLAFDHGAHSFVARGLYALQLSGWIEAYG--KENVLLLTLDEFKTTENLHDTMDKVFNFLDLPYHRIRDTTAKNTRKYDPINDAVRAKLTAFYAPYNEKLYTLLDRNMG 527          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: ETM49885.1 (hypothetical protein L914_05955 [Phytophthora parasitica])

HSP 1 Score: 105.5 bits (262), Expect = 8.600e-19
Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLARPRG 122
            M +EEF  + +  R    HG+HS + RGLYALQL  W+  +G  K  +++L  +E +T E     + KVF FL LP H I DT AK+TR+Y+ +++ ++A++ AFYAP+N+KL+ +L R  G
Sbjct:  408 MCFEEFDEKIMHKRLAFDHGAHSFVARGLYALQLSGWIEAYG--KENVLLLTLDEFKTTENLHDTMDKVFNFLDLPYHRIRDTTAKNTRKYDPINDAVRAKLTAFYAPYNEKLYTLLDRNMG 527          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: XP_024582913.1 ((heparan sulfate)-glucosamine 3-sulfotransferase 1 [Plasmopara halstedii] >CEG46544.1 (heparan sulfate)-glucosamine 3-sulfotransferase 1 [Plasmopara halstedii])

HSP 1 Score: 105.5 bits (262), Expect = 8.600e-19
Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 0
Query:    1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLARPRG 122
            M  +EF    L +R    HG+HS L RGLYALQL  W+  +G D   +++L  ++ ++ E     + KVF FLGLP H I DT AK+TR+Y  +DE ++ R+AAFY P+N+KL+ +L R  G
Sbjct:  408 MNPDEFDRTVLRTRLNYDHGAHSFLARGLYALQLASWIEAYGID--NVLLLTLDDFKSVENLYATMDKVFNFLGLPYHRIKDTSAKNTRRYSSIDEAVRVRLAAFYKPYNEKLYALLGRDMG 527          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: ETO79058.1 (hypothetical protein F444_06193 [Phytophthora parasitica P1976])

HSP 1 Score: 104.0 bits (258), Expect = 2.500e-18
Identity = 51/122 (41.80%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLARPRG 122
            M +E+F  + +  R    HG+HS + RGLYALQL  W+  +G  K  +++L  +E +T E     + KVF FL LP H I DT AK+TR+Y+ +++ ++A++ AFYAP+N+KL+ +L R  G
Sbjct:  408 MCFEKFDEKIMHKRLAFDHGAHSFVARGLYALQLSGWIEAYG--KENVLLLTLDEFKTTENLHDTMDKVFNFLDLPYHRIRDTTAKNTRKYDPINDAVRAKLTAFYAPYNEKLYTLLDRNMG 527          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: KUF76509.1 (Membrane-associated sulfotransferase kil1 [Phytophthora nicotianae])

HSP 1 Score: 104.0 bits (258), Expect = 2.500e-18
Identity = 51/122 (41.80%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLARPRG 122
            M +E+F  + +  R    HG+HS + RGLYALQL  W+  +G  K  +++L  +E +T E     + KVF FL LP H I DT AK+TR+Y+ +++ ++A++ AFYAP+N+KL+ +L R  G
Sbjct:  393 MCFEKFDEKIMHKRLAFDHGAHSFVARGLYALQLSGWIEAYG--KENVLLLTLDEFKTTENLHDTMDKVFNFLDLPYHRIRDTTAKNTRKYDPINDAVRAKLTAFYAPYNEKLYTLLDRNMG 512          
BLAST of NO04G02500 vs. NCBI_GenBank
Match: KUF97425.1 (DNA ligase [Phytophthora nicotianae])

HSP 1 Score: 104.0 bits (258), Expect = 2.500e-18
Identity = 51/122 (41.80%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MTYEEFKTRFLASR-PLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVLFTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQARMAAFYAPFNDKLFEMLARPRG 122
            M +E+F  + +  R    HG+HS + RGLYALQL  W+  +G  K  +++L  +E +T E     + KVF FL LP H I DT AK+TR+Y+ +++ ++A++ AFYAP+N+KL+ +L R  G
Sbjct:  376 MCFEKFDEKIMHKRLAFDHGAHSFVARGLYALQLSGWIEAYG--KENVLLLTLDEFKTTENLHDTMDKVFNFLDLPYHRIRDTTAKNTRKYDPINDAVRAKLTAFYAPYNEKLYTLLDRNMG 495          
The following BLAST results are available for this feature:
BLAST of NO04G02500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28636.12.500e-17554.09auxin efflux carrier [Nannochloropsis gaditana][more]
EWM28634.12.000e-3666.38sulfotransferase [Nannochloropsis gaditana][more]
XP_002901874.12.300e-1942.62conserved hypothetical protein [Phytophthora infes... [more]
GAY01522.15.000e-1944.26Hypothetical protein PINS_009351 [Pythium insidios... [more]
XP_008891572.18.600e-1942.62hypothetical protein PPTG_02268 [Phytophthora para... [more]
ETM49885.18.600e-1942.62hypothetical protein L914_05955 [Phytophthora para... [more]
XP_024582913.18.600e-1944.26(heparan sulfate)-glucosamine 3-sulfotransferase 1... [more]
ETO79058.12.500e-1841.80hypothetical protein F444_06193 [Phytophthora para... [more]
KUF76509.12.500e-1841.80Membrane-associated sulfotransferase kil1 [Phytoph... [more]
KUF97425.12.500e-1841.80DNA ligase [Phytophthora nicotianae][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009575NSK009575Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02500.1NO04G02500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|291585gene_2020Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100182g10gene1958Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02500.1NO04G02500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02500 ID=NO04G02500|Name=NO04G02500|organism=Nannochloropsis oceanica|type=gene|length=3533bp
ATGACGTACGAAGAGTTTAAGACACGGTTTTTAGCTTCGAGACCACTTGG
GCATGGCAGCCATTCGTTGCTAGGGAGAGGGCTGTATGCCTTGCAGTTGC
AGCCGTGGATGGCTGAATTTGGGGGAGACAAGGGTCAGTTGATGGTATTG
TTTACCGAGGAGATGAGGACGGGGGAGGCGGCGCAGACACAGGTCGGCAA
GGTGTTTGCGTTCTTGGGGCTGCCTCCTCATGACATAATTGATACAGATG
CCAAGCATACTAGGCAGTACGAACAGTTGGACGAAAAAATGCAAGCGAGG
ATGGCAGCATTTTACGCGCCGTTTAATGACAAGTTGTTTGAGATGTTGGC
GCGACCGAGGGGGATGGCGGGGTGGGCGGGGATGAAAGAGGAGGGAGGGG
TTCGCAATGGACAGGTACTGTCCGTAGACGAGGCGAAGTCGGAGCAGCTT
Cgtacaaatgtaaggactgaacaaaatatgcggcgaaagcgggaataaag
taatgaaatgcatgtgtccgtggcgcgatcgtaatttttatttttttact
ttacgagggaggggtggggaggttgttatatagcttcttccctgttaaat
gattttgattttggtgcttttagcttaggtcttgctccatggcaatccta
atttggccgggctttgaatatatagggaaactctaatattttttgcgcgg
gtgtcctattttacatcccgcctcacgaattgtgacggcgaacggcgccc
gaaaggatggtaacggcgagcaacaacgcatcctcaatttgatttgacgt
ctcagactctcatcccacgcaacgcaataccccacaagaccctcagGTCG
CAAGGGAGAACAACGATCAACAGCAGGAACTGCAGCAGGAGCGAACGGCA
ACGCCGTGGAACCCAGCATCAATATGTTGATCGAGATGCCCACATGGGAA
CAACTGCAAGAATCATTGTCCGCATCGGCAAATGCCACGAGCAAAATCGT
CTTCTTGGTCCTTATAGGCGTCGCAGCCACTGCGCATGgtacgttgtatc
agtaggagactgggaagaggggtcaggaaggagccgcgtacgcttagttt
gagcatgcgggtttgagggagggtcaggtagtggaaatgatgtagcggcc
aaggcctcccgcatgctggtgttcagaacgatataaatgtgcgctcctct
ttgcttccatctttgcgctcgctttctaatgtgaatagatcctctgcacg
ttttcaccgtctcaacttctccctccactcccttccgctcccacagGTGT
CTTCAACGACCAAGGCGTTTCCGACCTGGGCCGTCTCGTTTATCACGTCA
CCCTTCCCGCCCTCCTATTCGTCAATATTATCAGCGAAGTGACATTGGCT
CGCTTGCTCGTCCTCTGGAAACTTCCGGCAATGGCCCTGTTACATGTGTC
CTCTGGTTATCTCCTTGCGAAGTGCCTGACTTCTTTTTTCCGGATTCGGG
GGATAGGGAACAAGGCAGTGACATTGTCCCTAATGTTTGGAAATGTGGGC
TCGCTTGCAATTGCTGTGGTTGATACATTGTGTGCGGATGAGCCTTTAGC
ATCCGAGGTGGGGCCGACATGTGCGTTGAGAGGGGTGGAGTACATCTCGT
TTTATTTGATCACACAGACAATATTAATGTTCACGTGGGCGGAGGAAATT
GTGAAGGATGGGACGGGCGACGAAGACGAGGATGAAGACGATGACGAAGA
TGAAGACGAGGAAGAATTATTGCATAGTTTCAAGGAGGAGGATGAGGAAG
ACTTGATAAGGGGTACATTTGCAGGGGGAGAGGGGGACGCAGGGGAGGTA
GAGAGCCCTACCTATGCGACCCCTGTGACAATCCCTGGAGCGGCGTCTCC
CCCCCCTATCGCTGCTGACGGGCAGGTGCAACATCAGCAACGGATTGGAC
TATTGAGCTCTTCCCGGAGACGAAATGGAGGGGGAGGAAGCTTCGTTCGC
TTTCACACGTCTGATTCTGACGCTGATGATTCGAGGCATGGACGGATTGC
TCCCTCTTCTGACGGAGGCGGAGGAACGCCTAGACTGAGAAGGTTGCACT
CACAATCGCAGATCTTGGATGAGGAAGATATAAATTCGATTTTAAGTCGG
TATGCGGTTGAGAGCCGCCCGCGATTAGACGCGGAGGTGAGCGGTGGGCA
CGGCTTGGGTGGCTTAGTGGGCTTGGCAGGGAGTCTTAGTAGTACGCACT
TGCCTTCGTTTTCTACGTCTCCAGCGCTTTTCCGACGACGGGGGTCAAGG
ACGGATATGATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGGA
AGGGCAGCAAGAAAAGGATCGGTTATTGGGACGGCAGCGGAGGAGGAGTG
GGAGCATGGGCAGGCCGGGTGCAACGACCTACCAAACCACCGGCATCAGC
AATAGCAACAGCAAAAGCATCAGGAGCAGCGGTGACATCAGTAATGCTCT
CCTTATCGGGACGAGTGGCGGCTCTGTCCCTCCAAGCATCATCACTACCC
CCACCACCAATGGAAGCCTTTCAACCCCCTCTGCTCCTCCTCCTCCCCCT
CCTCCTCCTCCCCCTTCTCCCCCTCCTCCTCCTCCTCCTTCCGGCATCCC
CATTTCTACTCTCACCCATTCTGTGCCCCCTCTTTTTTCCCCTTCTGCCA
CCCTTGGCTTGGGAGGAACCTCTCCTCCCCCACCTACCAACACCTCTTAC
TTGGCCTCCTTCAAAAATGGGGCCCTTGTCGTCCTTTCTCGCATGGTGGC
CAACCCCTCCATCCGGGCTGCCCTCCTTGCTTTCTTCCTGGGCTTAATTC
CACCAATCAAAGCACTCTTTGTCTCTTCTGCCGATAGACCCAATCCCCCC
TTAGGAGCCTTTTTGGGAGCGATGCAGATTCTCGGACAAGCGCAAGTGCC
TTGCTCCATGCTAATGCTTTCAGGATCAGGAACGATCAGGTATTTGAATG
ACAAGGCAGCTCAAAACAACGTGGAGACTTCCTTTGCGTTCTCCCCGAAA
GTAATATTTTGTATTATCTTGGGGAGAGTCCTCTTGTTTCCGTTGGTGGG
GTTGTTTTGGTGGTGGGCTGGGTATGGATTAGGTTTGTTCGTAGGGACGC
CTGTGTTGAGCTTGGTCGTGCTGCTGGATGCTGCGGTACCGACGGCGCAG
AATGTTGTGATGCTGATCCTGGTGCATGGGAAGGCGGAGCATGGACACGC
GTTGGCGTATGTGATACTGTGGCAGTACGCACTTTGTATCCCGATGTTAA
TTCTGAATGTGACGCTTTACTTGGCTATCATTAGGACTGTTTACCCTCTA
TAGGAAGAAGGATGAGAATGAAGGAGGGAGCATTTGAAGAAGAAATTATT
GTGAGAAAGAGATTTAGGCATGTCATATAGAAGATATTCATGATGATGAT
GGTGATGATGAGGTCATATGGATCTTTTCTGTCGTAGCTATCCTACAAAC
CTAGAACTATCGCATGCATGCAACCTGACGTCC
back to top

protein sequence of NO04G02500.1

>NO04G02500.1-protein ID=NO04G02500.1-protein|Name=NO04G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=900bp
MTYEEFKTRFLASRPLGHGSHSLLGRGLYALQLQPWMAEFGGDKGQLMVL
FTEEMRTGEAAQTQVGKVFAFLGLPPHDIIDTDAKHTRQYEQLDEKMQAR
MAAFYAPFNDKLFEMLARPRGMAGWAGMKEEGGVRNGQVLSVDEAKSEQL
RRKGEQRSTAGTAAGANGNAVEPSINMLIEMPTWEQLQESLSASANATSK
IVFLVLIGVAATAHGVFNDQGVSDLGRLVYHVTLPALLFVNIISEVTLAR
LLVLWKLPAMALLHVSSGYLLAKCLTSFFRIRGIGNKAVTLSLMFGNVGS
LAIAVVDTLCADEPLASEVGPTCALRGVEYISFYLITQTILMFTWAEEIV
KDGTGDEDEDEDDDEDEDEEELLHSFKEEDEEDLIRGTFAGGEGDAGEVE
SPTYATPVTIPGAASPPPIAADGQVQHQQRIGLLSSSRRRNGGGGSFVRF
HTSDSDADDSRHGRIAPSSDGGGGTPRLRRLHSQSQILDEEDINSILSRY
AVESRPRLDAEVSGGHGLGGLVGLAGSLSSTHLPSFSTSPALFRRRGSRT
DMMQQQQQQQQQQEEEGQQEKDRLLGRQRRRSGSMGRPGATTYQTTGISN
SNSKSIRSSGDISNALLIGTSGGSVPPSIITTPTTNGSLSTPSAPPPPPP
PPPPSPPPPPPPSGIPISTLTHSVPPLFSPSATLGLGGTSPPPPTNTSYL
ASFKNGALVVLSRMVANPSIRAALLAFFLGLIPPIKALFVSSADRPNPPL
GAFLGAMQILGQAQVPCSMLMLSGSGTIRYLNDKAAQNNVETSFAFSPKV
IFCIILGRVLLFPLVGLFWWWAGYGLGLFVGTPVLSLVVLLDAAVPTAQN
VVMLILVHGKAEHGHALAYVILWQYALCIPMLILNVTLYLAIIRTVYPL*
back to top
Synonyms
Publications