NO04G01230, NO04G01230 (gene) Nannochloropsis oceanica

Overview
NameNO04G01230
Unique NameNO04G01230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2196
Alignment locationchr4:385876..388071 -

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Properties
Property NameValue
DescriptionAlpha--mannosyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:385876..388071 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO:0006486protein glycosylation
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO:0016757transferase activity, transferring glycosyl groups
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR022751Alpha_mannosyltransferase
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO04G01230 vs. NCBI_GenBank
Match: KGQ05567.1 (Alpha-1,3-mannosyltransferase MNT2 [Beauveria bassiana D1-5])

HSP 1 Score: 73.2 bits (178), Expect = 3.400e-9
Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 0
Query:  359 QLASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRDYVPSSSHKWDWIPEEFCVDTDAVV---EYYRGTEG---DSSCVLFDKARNWDALLVTAILNGP 468
            +L  +AAKPY +L SSF+E +  DA ++ F DPEML    DY   G   F+D       K DW+ +       A V    Y++G  G   +S  V+ DK R++ ++L+   LNGP
Sbjct:  244 KLTGWAAKPYAILFSSFREAIFIDADSLFFHDPEMLFEDQDYQRTGALFFKDRALWREWKKDWLKKVLPKPVSAQVLDSRYWKGESGQMQESGVVVIDKWRHFISMLIVCRLNGP 358          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: ORY75561.1 (hypothetical protein LY90DRAFT_698999 [Neocallimastix californiae])

HSP 1 Score: 73.2 bits (178), Expect = 3.400e-9
Identity = 79/309 (25.57%), Postives = 118/309 (38.19%), Query Frame = 0
Query:  216 YFPPPMMRTLQRRGVVISASGTVPRLAAGAYITAYLIRKVFNSDLPIEIYHVGEREAFDPELKTHLIALGNLQVLDLVVVLRDKFGTAVSQAGAKAARADAAKQMAGEGRRTDDEEEYETPQRGGEQTVDADSHLYYLMPSIRQLASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRDYV----PSSSHKW--DWIPEEFCVDTDAVVEYYRGT--EGDSSCVLFDKARNWDALLVTAILNGP--LQHITYNKMNGDKDTWVMALSYTRQ--GKLPPLRTLPGFLFIDYEGN 513
            Y    + ++ + RG+VI A       A     T   IR +  SDLPIEI++ GE                     DL V  R+KF                              +EY        + V       Y      ++  +A KP+++LAS F+E +L DA A+   DP +L     Y E G   FRD      P    KW  +W+      +T  +  +   T  E +SS V+ DK+R    LL     N       + Y  ++GDK+T+ M     RQ   ++P    + G L +  EG+
Sbjct:  166 YSTKDLFKSYEGRGIVICAGNGHFGFAIS---TVDTIRNIIESDLPIEIFYNGEN--------------------DLSVENREKF------------------------------KEY--------KDVYVSDVTKYFEEEPLKIGGWAIKPFSILASRFEEVILMDADAMYIRDPAVLFEDEGYKETGTVFFRDRTLFPGPHGGSKWLKEWMINPL-PETKGLRFWNEETCHEMESSTVVIDKSRTILGLLAVCKFNEQRIRDDVVYEHVHGDKETFWMGFDMARQHYNEIPLPNVIVGELAVGAEGD 412          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: PHH85346.1 (hypothetical protein CDD83_567 [Cordyceps sp. RAO-2017])

HSP 1 Score: 72.8 bits (177), Expect = 4.400e-9
Identity = 57/189 (30.16%), Postives = 92/189 (48.68%), Query Frame = 0
Query:  360 LASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRDYVPSSSHKWDWIPEEFCVDTDAVVE---YYRGTEG---DSSCVLFDKARNWDALLVTAILNGPLQHITYNK--------MNGDKDTWVMALSYTRQGKLPPLRTLPGFLFIDYEGNGEARKIHGQLQLLKVGMDGGDE 535
            L+ +AAKP+ +L SSF+E +  DA ++ F DPE+L     Y   G   +RD V  +  K  W+ +         V+   Y+ G  G   +S  V+ DK +++ ALL+ A LNGP ++   NK        ++GDK+T+   L +   G L          ++ +EG+       G L + +   +GGDE
Sbjct:  300 LSGWAAKPFAILLSSFREVIFIDADSLFFRDPEILFDDPGYVATGALFYRDRVMLAESKKAWLQKLLPEPISQQVKQNRYWTGESGHMQESGVVVVDKWKHFVALLMVARLNGPDRNGDSNKGTVGMYDMVHGDKETF--WLGWELVGDLD---------YVFHEGDA------GALGVFQESEEGGDE 471          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: XP_018707896.1 (alpha-1,3-mannosyltransferase [Cordyceps fumosorosea ARSEF 2679] >OAA72450.1 alpha-1,3-mannosyltransferase [Cordyceps fumosorosea ARSEF 2679])

HSP 1 Score: 72.4 bits (176), Expect = 5.800e-9
Identity = 46/141 (32.62%), Postives = 70/141 (49.65%), Query Frame = 0
Query:  359 QLASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRDYVPSSSHKWDWIPEEFCVDTDAVV---EYYRGTEG---DSSCVLFDKARNWDALLVTAILNGPLQH--------ITYNKMNGDKDT-WV 485
            +LA +A KP+ +L SSF+E +  DA ++ F DPE L    DY   G   FRD       K DW+ +         V    Y++G  G   +S  V+ DK R++ A+L+   +NGP +           Y+ + GDK+T W+
Sbjct:  844 KLAGWAVKPFAILFSSFREVIFVDADSLFFHDPETLFEDEDYQRTGALFFRDRTLWKEWKQDWLKKVLPKPISPAVIASRYWKGESGHMQESGVVVVDKWRHFIAMLIVCRMNGPERDGNKEKDLVGVYDMVYGDKETFWI 984          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: OON03433.1 (hypothetical protein BSLG_06247 [Batrachochytrium salamandrivorans])

HSP 1 Score: 70.9 bits (172), Expect = 1.700e-8
Identity = 48/174 (27.59%), Postives = 84/174 (48.28%), Query Frame = 0
Query:  340 GEQTVDADSHLYYLMPSIRQLASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRDYVPSSSHKWDWI---------PEEFCVDTDAVVEYYRGTEGDSSCVLFDKARNWDALLVTAILNG-PLQHITYNKMNGDKDTWVMALSYTRQGKLPPLRTLPG 504
            G  T+D +S+     P + +   +A KP+++LASSF+E +  DA A+ F  PE++ + A Y + G   + D       + + +         P E+      +V      EG+S  ++++K  N  ALL+T + N  P + I Y   +GDK+++ +A     +    P R  PG
Sbjct:  207 GVVTIDLESYFDSHGPDLNR---WAIKPFSMLASSFEEIIFVDADALFFQPPEVIFNSAAYNDTGAVFYMDRTLYGGMESEGLTFFNKLVKEPSEYAKTKGRLVSKLSTHEGESGVIVWNKRINLHALLLTCVFNSEPHRSIMYKAYHGDKESYWIA----HEALKMPYRWAPG 373          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: KUI73433.1 (Putative alpha-1,3-mannosyltransferase MNN14 [Valsa mali])

HSP 1 Score: 70.5 bits (171), Expect = 2.200e-8
Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 0
Query:  359 QLASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRDYVPSSSHKWDWIPEEFCVDTDAVVEYYR------GTEGDSSCVLFDKARNWDALLVTAILNGPLQH--------ITYNKMNGDKDTW 484
            Q+AS+AAKP+ +L SSF+E +  DA +  F +PE+L     Y + G   FRD +    +K +W+           V+  R      G + +S  ++ DK R++ ALL T  +NGP +           Y+ + GDK+T+
Sbjct:  345 QVASWAAKPFAILLSSFREAIFIDADSFFFKNPEVLFDDPGYVKTGALFFRDRLIMPENKREWLQSILPQPVSRNVKQSRLWVGDSGHQQESGVIVVDKYRHFMALLFTTRMNGPDRDGKQDEGIVGVYDMVYGDKETF 483          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: OAQ99717.1 (hypothetical protein LLEC1_02726 [Cordyceps confragosa])

HSP 1 Score: 69.7 bits (169), Expect = 3.800e-8
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 0
Query:  359 QLASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRDYVPSSSHKWDWIPEEFCVDTDAVVE---YYRGTEG---DSSCVLFDKARNWDALLVTAILNGPLQH--------ITYNKMNGDKDTW 484
            +LA +A K Y ++ SSF+E +  DA +  F DP  L    DY   G   F+D V     K DW+ +       + V+   Y++G  G   +S  V+ DK R++ A+LV   +NGP ++          Y+ + GDK+T+
Sbjct:  305 KLAGWAVKAYAIMYSSFREAIFIDADSFFFKDPATLFEDEDYQRTGALFFKDRVMWHEWKQDWLKKVLPKPISSKVQASRYWKGESGHMQESGVVVVDKWRHFIAMLVVCRMNGPERNGNKDLGTVGVYDMVYGDKETF 443          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: XP_006678184.1 (hypothetical protein BATDEDRAFT_87616 [Batrachochytrium dendrobatidis JAM81] >EGF81363.1 hypothetical protein BATDEDRAFT_87616 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 69.3 bits (168), Expect = 4.900e-8
Identity = 46/132 (34.85%), Postives = 64/132 (48.48%), Query Frame = 0
Query:  366 KPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRD---------YVPSSSHKWDWIPEEF----CVDTDAVVEYYRGTEGDSSCVLFDKARNWDALLVTAILNG-PLQHITYNKMNGDKDTW 484
            KP  VLASSFQ+ +L D  A+ F  PE L     Y E G   FRD         + P  +   + + E F      +T  V+      E DS  V++DK R+  A+L+T  LN  P   + Y+K  GDK+T+
Sbjct:  259 KPLAVLASSFQQVILMDTDALFFQHPETLFETKAYKETGALFFRDRTLGFGTYGHGPGLTDLINTLAEPFKENLIFNTSRVMAKVSSDELDSGVVVWDKTRSMPAILLTCALNSMPYMDLIYSKTYGDKETY 390          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: KUI59883.1 (Putative alpha-1,3-mannosyltransferase MNN14 [Valsa mali var. pyri])

HSP 1 Score: 69.3 bits (168), Expect = 4.900e-8
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 0
Query:  359 QLASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRDYVPSSSHKWDWIPEEFCVDTDAVVEYYR------GTEGDSSCVLFDKARNWDALLVTAILNGPLQH--------ITYNKMNGDKDTW 484
            Q+AS+AAKP+ +L SSF+E +  DA +  F +PE+L     Y + G   FRD +    +K +W+           V+  R      G + +S  ++ DK +++ ALL T  +NGP +           Y+ + GDK+T+
Sbjct:  345 QVASWAAKPFAILLSSFREAIFIDADSFFFKNPEVLFDDPGYVKTGALFFRDRLIMPENKREWLQSILPQPVSRNVKQSRLWVGDSGHQQESGVIVVDKYKHFMALLFTTRMNGPDRDGKQDEGVVGVYDMVYGDKETF 483          
BLAST of NO04G01230 vs. NCBI_GenBank
Match: OAJ36444.1 (hypothetical protein BDEG_20617 [Batrachochytrium dendrobatidis JEL423])

HSP 1 Score: 69.3 bits (168), Expect = 4.900e-8
Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 0
Query:  363 YAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADYTELGFADFRD---------YVPSSSHKWDWIPEEFCVD----TDAVVEYYRGTEGDSSCVLFDKARNWDALLVTAILN-GPLQHITYNKMNGDKDTW 484
            Y  KP+ VLASSF+E ++ DA  + F  PE++   A Y E+G   FRD         + PS     + I   +  +       V+      E D+  V++DK R   A+L+T +LN  P +H  Y++  GDK+T+
Sbjct:  207 YENKPFAVLASSFREVIMIDADVLFFQPPEVIFESAGYKEMGAVIFRDRTLEYGTWNHGPSLKRLVEEIAHPYLSNLIYPEARVMRKKTAQEIDAGVVVWDKMRTMPAILLTCLLNSSPYKHWIYDRTLGDKETF 341          
The following BLAST results are available for this feature:
BLAST of NO04G01230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KGQ05567.13.400e-936.52Alpha-1,3-mannosyltransferase MNT2 [Beauveria bass... [more]
ORY75561.13.400e-925.57hypothetical protein LY90DRAFT_698999 [Neocallimas... [more]
PHH85346.14.400e-930.16hypothetical protein CDD83_567 [Cordyceps sp. RAO-... [more]
XP_018707896.15.800e-932.62alpha-1,3-mannosyltransferase [Cordyceps fumosoros... [more]
OON03433.11.700e-827.59hypothetical protein BSLG_06247 [Batrachochytrium ... [more]
KUI73433.12.200e-831.65Putative alpha-1,3-mannosyltransferase MNN14 [Vals... [more]
OAQ99717.13.800e-831.65hypothetical protein LLEC1_02726 [Cordyceps confra... [more]
XP_006678184.14.900e-834.85hypothetical protein BATDEDRAFT_87616 [Batrachochy... [more]
KUI59883.14.900e-830.94Putative alpha-1,3-mannosyltransferase MNN14 [Vals... [more]
OAJ36444.14.900e-832.59hypothetical protein BDEG_20617 [Batrachochytrium ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009695NSK009695Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01230.1NO04G01230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668669gene_1906Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01230.1NO04G01230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01230 ID=NO04G01230|Name=NO04G01230|organism=Nannochloropsis oceanica|type=gene|length=2196bp
ATGACGGGTGTCATAGACAGCAGAAATGCTGTGGTACGTAGGCATAGTTT
TACAGACAACGAGGAGCGGAAGGAAGGCGGGGGGGGCGCCTCAACCATAC
TGCAAATTGGGATTGAAGCAGAAGACGAGGCACCTTTCCTGGCCGGACCT
GCTGCGCGTCGCGGCCGCCGCAGCAGCGCTTCCATGGCTTGGCTGGGCCT
CCGCTACCTGCTCACATGGCGGAACATGCTGATTGTGAAAGTGGGAAGCG
TAATCCTTTTCATGCTAACTCGAGCGTACGTCTCTCGTCGAGATCCGCCG
CAAAATTACTCTCACGTGCACGCGTCGCCACGGCATGCAGCAGCGCAGCA
GCAGAATCAGCAGAGTCAGCAGAACCGGCAGCAGCAGCAGCAGCAGCGAC
GACAACAACCACAAGACCAACAGCACCAAAGGCGTCCGGAGGTGTACAAG
CTTCAGCCAGGAATGTGGAGCCGCAGCTACAAGCTTTTTCAAGACAGCAT
TCACCACATGCGCCATAGCTGGGTGAAGCATGGCGCGGCGCCTGGACAAG
TTTCGGTGGTTGGGCCGATGCCTGCACGTTGTGCTTGGCCGGGAAATTTA
TCTGCCTCGTCTTCACATTTCTTCCTTGGTGGACAGCACTTTGACTACTT
CCCACCTCCTATGATGAGGACACTGCAACGTCGAGGGGTGGTCATCAGCG
CGTCAGGCACCGTTCCCCGTCTCGCCGCAGGAGCTTACATTACTGCCTAC
TTAATCCGCAAAGTTTTTAATTCTGACTTGCCCATTGAAATTTACCACGT
CGGTGAGCGCGAAGCTTTTGATCCTGAGCTTAAAACCCACCTTATTGCCC
TCGGTAATTTGCAAGTCCTCGACCTGGTGGTGGTTCTACGGGACAAATTC
GGCACCGCCGTAAGTCAAGCTGGAGCCAAGGCAGCTAGGGCTGATGCCGC
AAAACAAATGGCCGGGGAAGGTAGAAGAACTGACGACGAGGAGGAATACG
AGACCCCGCAGCGAGGTGGGGAGCAGACTGTCGACGCCGATAGCCACCTC
TATTATCTCATGCCTTCGATCAGGCAGCTTGCTTCTTATGCGGCCAAACC
TTACACCGTTCTTGCGTCATCCTTCCAAGAAAATGTGCTCTTTGACGCAG
GAGCTGTCCCGTTCCTAGACCCGGAGATGCTTTTAAGCTTGGCTGACTAC
ACGGAGTTGGGCTTTGCAGATTTTCGAGATTATGTCCCTTCGTCTTCGCA
CAAGTGGGACTGGATTCCTGAAGAGTTTTGTGTTGATACGGATGCAGTGG
TTGAGTACTATCGGGGCACGGAAGGTGACAGCAGCTGTGTCCTCTTTGAT
AAGGCCCGAAATTGGGACGCGTTGCTTGTGACTGCAATTTTGAACGGGCC
CTTGCAACATATTACGTACAACAAAATGAATGGGGATAAAGACACCTGGG
TTATGGCGTTGTCCTATACGCGACAGGGGAAACTTCCACCACTACGCACG
CTGCCGGGCTTTCTCTTCATCGATTACGAGGGAAATGGTGAAGCAAGGAA
GATTCACGGGCAGTTGCAACTTCTCAAGGTGGGCATGGACGGGGGCGATG
AATACATGATGGGCGCCAAGGCCCTCTGGCAGGCGCCGCCAATTGATGCC
AAGGGTTTTTTAATTCCGCTTTATTTTAATAACCAGCTGTgtaagtaagt
cagtggagtgcgacacacgagacatactccaaaaggcggaatatgtgcat
aaattgtatcttgaatgtgactcgaggttctgcggcgctttatttggcaa
ggtctaatcttctttcattcacacataaacagTCAATTTTACGCAATGGG
AGTATAACAAGGGCTGGACCTATATCGGCAGCTATGATGACTACGGCTCG
CTCTACAATCCGCCCACATCCCTGTCGCCCGACTGCCGCCCCGTGCCTGT
GGACGGCCTGGACCCACTAGTAGCGCCCATGGAAATCGCCTTTGACGGGG
TGGTGGAGGCCTTGAGGGCCATAAACTCGACACATTGCGGATGTCGGGAT
GATTGGCCTACGGCGTGTGTGACATTTGTATACTAATTAGAAGCAAAGAC
AGAGGAAGGGATTTATATGTTCACTGCACAAACGCAACCGCAAAGAAAAG
AGAGATATAGGAAATCAGAGAGGAAGTTCAGGCAAAGACAAACACG
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protein sequence of NO04G01230.1

>NO04G01230.1-protein ID=NO04G01230.1-protein|Name=NO04G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp
MTGVIDSRNAVVRRHSFTDNEERKEGGGGASTILQIGIEAEDEAPFLAGP
AARRGRRSSASMAWLGLRYLLTWRNMLIVKVGSVILFMLTRAYVSRRDPP
QNYSHVHASPRHAAAQQQNQQSQQNRQQQQQQRRQQPQDQQHQRRPEVYK
LQPGMWSRSYKLFQDSIHHMRHSWVKHGAAPGQVSVVGPMPARCAWPGNL
SASSSHFFLGGQHFDYFPPPMMRTLQRRGVVISASGTVPRLAAGAYITAY
LIRKVFNSDLPIEIYHVGEREAFDPELKTHLIALGNLQVLDLVVVLRDKF
GTAVSQAGAKAARADAAKQMAGEGRRTDDEEEYETPQRGGEQTVDADSHL
YYLMPSIRQLASYAAKPYTVLASSFQENVLFDAGAVPFLDPEMLLSLADY
TELGFADFRDYVPSSSHKWDWIPEEFCVDTDAVVEYYRGTEGDSSCVLFD
KARNWDALLVTAILNGPLQHITYNKMNGDKDTWVMALSYTRQGKLPPLRT
LPGFLFIDYEGNGEARKIHGQLQLLKVGMDGGDEYMMGAKALWQAPPIDA
KGFLIPLYFNNQLFNFTQWEYNKGWTYIGSYDDYGSLYNPPTSLSPDCRP
VPVDGLDPLVAPMEIAFDGVVEALRAINSTHCGCRDDWPTACVTFVY*
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Synonyms
Publications