NO04G01090, NO04G01090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_054695336.1 (HPP family protein [Desulfosarcina cetonica]) HSP 1 Score: 149.4 bits (376), Expect = 2.000e-32 Identity = 81/181 (44.75%), Postives = 118/181 (65.19%), Query Frame = 0 Query: 48 YFKKWLGVSNKRDTHRVPSLRHSFV--SFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYW 227 YFKK LG +T P + S V S+L + + +A + Y + + +M ++GSFGA+AVL+Y A SPLAQPR ++ GH +SA GVT ++++G P+ +A +AV AI +M T + HPPGGATAL+A++G D V K GY Y+L P GA++ML+VAL+ NNL +R YP++W Sbjct: 3 YFKKMLG-----NTQSPPGVAMSEVLWSWLGSFLGIALVALVHYKLLDRTGLVM-IIGSFGASAVLVYGAIRSPLAQPRNLIGGHMLSAAIGVTAFQLIGGQPWLAAALAVSTAIAVMHLTRTLHPPGGATALIAVIGSDAVHKLGYLYILIPAGLGAVVMLIVALLVNNLAQNRRYPEFW 177
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_034681842.1 (HPP family protein [Chryseobacterium piperi] >KFF29765.1 HPP family protein [Chryseobacterium piperi] >ATL75914.1 HPP family protein [Chryseobacterium piperi]) HSP 1 Score: 148.7 bits (374), Expect = 3.400e-32 Identity = 77/159 (48.43%), Postives = 112/159 (70.44%), Query Frame = 0 Query: 68 RHSFVSFLQATFSLTTLAFL-DYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQY 226 + F SFL A F + +AF+ +++ +E+ +FL+GSFGA++VL+Y A SPLAQPR ++ GH +SAL GVT+YKI+ +I + SA +AV +I LM+ T + HPPGGATAL+A+ + + GYWY L P LSG +++LLVAL NN+ P+R YP + Sbjct: 25 KEHFWSFLGAFFGIGIIAFIQSHYLLEQEN--IFLIGSFGASSVLIYGAIQSPLAQPRNLIGGHVLSALVGVTIYKIVPDILWLSAPLAVAFSIVLMQYTKTLHPPGGATALIAVTSSGKIPELGYWYALSPVLSGCVILLLVALFFNNITPNRSYPNH 181
BLAST of NO04G01090 vs. NCBI_GenBank
Match: PID74829.1 (HPP family protein [Desulfobacterales bacterium]) HSP 1 Score: 148.7 bits (374), Expect = 3.400e-32 Identity = 75/130 (57.69%), Postives = 94/130 (72.31%), Query Frame = 0 Query: 99 MFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNL--DPDRHYPQYW 227 +FL+GSFGA+AVL+Y AP + LAQPR ++ GH VSAL GV++ + P +A AV LAI +M T + HPPGGATAL+A++GG+ V GYWY L P L GAL+MLLVAL+ NNL DP RHYP YW Sbjct: 51 LFLIGSFGASAVLVYGAPQAELAQPRNLIGGHLVSALTGVSMALFFRDNPLLAASFAVSLAIVVMHLTRTLHPPGGATALIAVIGGEKVHALGYWYALNPVLVGALIMLLVALLVNNLSADPKRHYPVYW 180
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_023577035.1 (HPP family protein [Flavobacterium saliperosum] >ESU24059.1 membrane protein, HPP family [Flavobacterium saliperosum S13] >SCX10975.1 HPP family protein [Flavobacterium saliperosum]) HSP 1 Score: 148.3 bits (373), Expect = 4.400e-32 Identity = 74/156 (47.44%), Postives = 106/156 (67.95%), Query Frame = 0 Query: 68 RHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYP 224 + F +F+ A + +A+L Y M KE ++FL+GSFGA+ VL+Y SPLAQPR ++ GH VSA+ GVT K+ ++ + ++ VAV AI M+ T + HPPGGATAL+A+ G + K GYWYV+FP SGA+++L+VALV NN+ +R YP Sbjct: 26 KEHFWAFVGAFVGMGIIAYLQYNMLPKED-VVFLIGSFGASCVLVYGVIQSPLAQPRNLIGGHVVSAIVGVTAAKLFPDMIWLASAVAVAFAIVFMQITKTLHPPGGATALIAVTGSPTILKLGYWYVIFPVFSGAMILLIVALVFNNMTANRQYP 180
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_078923002.1 (HPP family protein [Thiothrix eikelboomii] >SKA84850.1 HPP family protein [Thiothrix eikelboomii]) HSP 1 Score: 148.3 bits (373), Expect = 4.400e-32 Identity = 80/182 (43.96%), Postives = 110/182 (60.44%), Query Frame = 0 Query: 45 LSQYFKKWLGVSNKRDTHRVPSLRHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYW 227 L Y K G N H + R++ S++ + + ++D + L+GSFGATAVLLY +PS+P AQPR V+ GH + AL GV+ YK+M + + S+ + V AI LM T +THPPGG TAL+A+ G + V + GYW+V+ P L G LL+L+VALV NNL P R YP YW Sbjct: 6 LKLYLSKMQGGGN-NSPHPI-HWRNALCSWMGGFLGIALVGWMDSLTSLTTQDHLLLIGSFGATAVLLYGSPSAPFAQPRYVIGGHVICALVGVSFYKLMPDPLWLSSALTVSTAIVLMYLTRTTHPPGGGTALIAVAGSERVHELGYWFVVEPILLGVLLLLIVALVVNNLSPLRRYPNYW 185
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_054509232.1 (HPP family protein [Chryseobacterium sp. ERMR1:04] >KPH14557.1 HPP family protein [Chryseobacterium sp. ERMR1:04]) HSP 1 Score: 147.9 bits (372), Expect = 5.800e-32 Identity = 81/168 (48.21%), Postives = 114/168 (67.86%), Query Frame = 0 Query: 68 RHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYWSHYFPLYEK 236 + F SFL A F + +AF+ Q ++ +FL+GSFGA++VL+Y A SPLAQPR ++ GH +SA+ GVTVYKI+ +I + SA +AV +I LM+ T + HPPGGATAL+A+ + + GYWYVL P LSG +++L+VAL NNL P+R YP + S + L K Sbjct: 26 KEHFWSFLGAFFGIGLIAFIQSH-QLLQTENVFLIGSFGASSVLIYGAIQSPLAQPRNLIGGHVLSAIVGVTVYKIVPDIIWLSAPLAVAFSIILMQYTKTLHPPGGATALIAVSSTGKIPELGYWYVLSPVLSGCIILLIVALFFNNLTPNRSYPTH-SRFIKLLRK 191
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_056031835.1 (HPP family protein [Chryseobacterium sp. Leaf404] >KQT17445.1 HPP family protein [Chryseobacterium sp. Leaf404]) HSP 1 Score: 147.9 bits (372), Expect = 5.800e-32 Identity = 81/158 (51.27%), Postives = 109/158 (68.99%), Query Frame = 0 Query: 68 RHSFVSFLQATFSLTTLAFLD--YFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYP 224 R F SFL A F + +AF Y +Q + +FL+GSFGA++VL+Y A SPLAQPR ++ GH +SAL GVTVY+I+ +I + SA +AV +I LM+ T + HPPGGATAL+A+ + + GYWYVL P LSG L++LLVALV NN+ +R YP Sbjct: 25 REHFWSFLGAFFGIGLIAFFQSHYLLQEEN---VFLIGSFGASSVLIYGAIQSPLAQPRNLIGGHVLSALVGVTVYQIVPDILWLSAPLAVAFSIVLMQYTKTLHPPGGATALIAVTSTGKIPEMGYWYVLSPVLSGCLILLLVALVFNNMTKNRTYP 179
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_099366780.1 (HPP family protein [Sphingobacterium sp. 1.A.4] >PRD28515.1 transmembrane protein [Nephila clavipes]) HSP 1 Score: 147.9 bits (372), Expect = 5.800e-32 Identity = 84/159 (52.83%), Postives = 108/159 (67.92%), Query Frame = 0 Query: 68 RHSFVSFLQATFSLTTLAFLDYFMQSKESYIM---FLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYP 224 R F SF+ A + +AF+ QS + +M FL+GSFGA+AVL+Y A SPLAQPR ++ GH VSAL GVT+ KIM +I + +A +AV +I M+ T S HPPGGATAL+A+ GG + GYWYVL P SGAL++LLVALV NN+ RHYP Sbjct: 10 REHFWSFVGAFIGIGIIAFI----QSHQLPLMENIFLIGSFGASAVLVYGAIQSPLAQPRNLVGGHVVSALVGVTIGKIMPDIIWLTAPLAVACSIVAMQVTRSLHPPGGATALIAVSGGTKISALGYWYVLTPVFSGALILLLVALVFNNITNKRHYP 164
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_100074435.1 (HPP family protein [Chryseobacterium camelliae]) HSP 1 Score: 147.9 bits (372), Expect = 5.800e-32 Identity = 79/159 (49.69%), Postives = 111/159 (69.81%), Query Frame = 0 Query: 68 RHSFVSFLQATFSLTTLAFL-DYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQY 226 R F SFL A F + +AF+ + + + E+ +FL+GSFGA++VL+Y A SPLAQPR ++ GH +SAL GVT+YKI+ +I + SA +AV +I LM+ T + HPPGGATAL+A+ + + GYWYV+ P LSG L++LL AL NNL P+R YP + Sbjct: 25 REHFWSFLGAFFGIGIIAFIQSHSLAATEN--IFLIGSFGASSVLIYGAIQSPLAQPRNLVGGHVISALVGVTIYKIVPDIIWLSAPLAVAFSIILMQYTKTLHPPGGATALIAVSSTGKIPELGYWYVISPVLSGCLILLLTALFFNNLTPNRSYPAH 181
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_035673476.1 (HPP family protein [Flavobacterium sp. 83]) HSP 1 Score: 147.5 bits (371), Expect = 7.500e-32 Identity = 77/165 (46.67%), Postives = 114/165 (69.09%), Query Frame = 0 Query: 68 RHSFVSFLQATFSLTTLAFLDYFMQSK---ESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYWSHY 230 + F +FL + + +A +MQSK S ++FL+GSFGA++VL+Y A SPLAQPR ++ GH VSA+ GVTV K +I + SA +AV ++I LM+ T + HPPGGATAL+AI+G + GYWYVL+P LSG +++L+VAL+ NN+ +R+YP + ++ Sbjct: 26 KEHFWAFLGSFIGIGLIA----YMQSKTLLHSDVVFLIGSFGASSVLVYGAIQSPLAQPRNLIGGHLVSAIVGVTVAKFAPDILWISAPLAVSISIVLMQVTKTLHPPGGATALIAIIGSPKITSLGYWYVLYPVLSGTIILLIVALIFNNITTNRYYPNHKKYH 186 The following BLAST results are available for this feature:
BLAST of NO04G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01090 ID=NO04G01090|Name=NO04G01090|organism=Nannochloropsis oceanica|type=gene|length=4716bpback to top protein sequence of NO04G01090.1 >NO04G01090.1-protein ID=NO04G01090.1-protein|Name=NO04G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bpback to top Synonyms
Publications
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