NO04G00540, NO04G00540 (gene) Nannochloropsis oceanica

Overview
NameNO04G00540
Unique NameNO04G00540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6225
Alignment locationchr4:195698..201922 +

Link to JBrowse

Properties
Property NameValue
DescriptionTransmembrane protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:195698..201922 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
Homology
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_012208271.1 (hypothetical protein SPRG_13947 [Saprolegnia parasitica CBS 223.65] >KDO21019.1 hypothetical protein SPRG_13947 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 304.7 bits (779), Expect = 4.200e-79
Identity = 183/377 (48.54%), Postives = 245/377 (64.99%), Query Frame = 0 
Query:    8 PLQPGATSPTEAVPLLSRTESIESWGLSNPHEL--LVSASSHQQHSHELHRPPTFAPVGWRDRLSSKSNIETWAFPGWGRYNLQMTVTDEELAKIEADMDHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDP-STLRENL-NTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPLARIVEDESVVLAKMAKHVG 381
            PL+P A +    +P  S ++   S+G  +  E   L+  S H  H                      +N++ W FPGWG+Y +   V  +EL  I+A++  R+ PKL++W ATAICGNDI++SCLYV GLVT  AGK+APV+L +V+ +LYL R++Y E + A+PMNGGS+NVLLN+TSK +AS AA+LA++SYIATGVVS TSA  YL         + + +GLLF FA+L  MGI ESA  A  I ++H  TL  LCV S +Y+  D  + L  NL  T FPDV + G   +G   TALFFG S+A+LG+SGFESSSQFVQ QAPGVF KTL+NMW G  +FNP++S L+LGV+P+A I   ++ VL++MA  VG
Sbjct:   22 PLRPHAIAVAMFIPPKSTSKMEGSYGSDSGREETGLLQRSLHPTH----------------------ANLKPWDFPGWGKY-INTEVKPDELRAIDAELKKREHPKLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSSTFPALPVVPSSIGLLFFFAVLTSMGISESAIFALGIFILHTITLITLCVMSMLYMSRDNFAILYGNLFETAFPDVNVAGTWVTGDVFTALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLKNMWWGVAIFNPLLSLLSLGVMPMANINMFKNTVLSQMALVVG 375
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: KUF80027.1 (Thioredoxin [Phytophthora nicotianae])

HSP 1 Score: 304.7 bits (779), Expect = 4.200e-79
Identity = 177/329 (53.80%), Postives = 233/329 (70.82%), Query Frame = 0 
Query:   57 PPTFAPVGWRDRLSSKSNIETWAFPGWGRYNLQMTVTDEELAKIEADM--DHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDP-STLRENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPL---ARIVEDESVVLAKMAKHV 380
            PP  +P+       + + ++ W FPGWG  N     +D EL +I+A +  DH    KL++W ATAICGNDI++SCLYV GLV   AGK+APVAL +V+ +LYL R++Y E + A+P+NGGS+NVLLN+TSK +A+ AA+LA++SYIATGVVS TSA +YL   V     + A +GLLF+FA+L L+GI ESA VA +I + H  TL +LCV SA+YV+ D   TL  N +T FPD+ L G I SG+F TA+FFG S+A+LG+SGFE+SSQFV+ QA GVF KTLRNMW G  +FNPMI+ L+LGVLPL     IV+  + VLA+M   V
Sbjct:  163 PPPLSPLMLHVNKHTNA-LKGWEFPGWGD-NSSTVASDSELNEIQAHLSTDH---TKLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVPATVGLLFIFAVLSLIGITESAIVALVIFIAHATTLVVLCVLSAIYVVKDDFQTLWANFDTDFPDINLAGDIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMIALLSLGVLPLNGPGGIVDKRNTVLAEMGLKV 486
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_008620351.1 (hypothetical protein SDRG_15943 [Saprolegnia diclina VS20] >EQC26206.1 hypothetical protein SDRG_15943 [Saprolegnia diclina VS20])

HSP 1 Score: 302.4 bits (773), Expect = 2.100e-78
Identity = 168/309 (54.37%), Postives = 214/309 (69.26%), Query Frame = 0 
Query:   73 SNIETWAFPGWGRYNLQMTVTDEELAKIEADMDHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDP-STLRENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPLARIVEDESVVLAKMAKHVG 381
            + +  W FPGWGR  L       EL  I+  M  +  P L QW ATAICGNDI++SCLY  G+    AGK+APVA+ MV+ VLYL R++Y E + A+P+NGGS+NVLLN+TSK +AS AA L ++SY+ATGVVS TSA  YL   V     + + + LLFLFA+L ++GI ESA VA +I  VH  TL +LCV S V+VI D  + L  N   P+PD+ + G    GS  TALFFG S+A+LG+SGFE+S+QFV+ QAPGVF KTLRNMW G ++FNP+ISFLALGVLPL+ I   ++ VLA M K VG
Sbjct:   30 TRVPPWDFPGWGR-QLHDAADPAELKAIDDHMASKHAP-LGQWPATAICGNDILSSCLYTAGVAAAKAGKLAPVAMAMVAAVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTSKRLASIAAALGILSYVATGVVSGTSACTYLASQVHGLEIVHSSIALLFLFAILAIIGISESAVVALLIFAVHTITLIVLCVASIVFVIRDQGAILTSNYQAPYPDINMAGQWIDGSVWTALFFGTSTAMLGISGFETSAQFVEEQAPGVFPKTLRNMWWGVVIFNPLISFLALGVLPLSAIQAHKNTVLAAMGKAVG 336
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_008620352.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC26207.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 302.4 bits (773), Expect = 2.100e-78
Identity = 168/309 (54.37%), Postives = 214/309 (69.26%), Query Frame = 0 
Query:   73 SNIETWAFPGWGRYNLQMTVTDEELAKIEADMDHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDP-STLRENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPLARIVEDESVVLAKMAKHVG 381
            + +  W FPGWGR  L       EL  I+  M  +  P L QW ATAICGNDI++SCLY  G+    AGK+APVA+ MV+ VLYL R++Y E + A+P+NGGS+NVLLN+TSK +AS AA L ++SY+ATGVVS TSA  YL   V     + + + LLFLFA+L ++GI ESA VA +I  VH  TL +LCV S V+VI D  + L  N   P+PD+ + G    GS  TALFFG S+A+LG+SGFE+S+QFV+ QAPGVF KTLRNMW G ++FNP+ISFLALGVLPL+ I   ++ VLA M K VG
Sbjct:   30 TRVPPWDFPGWGR-QLHDAADPAELKAIDDHMASKHAP-LGQWPATAICGNDILSSCLYTAGVAAAKAGKLAPVAMAMVAAVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTSKRLASIAAALGILSYVATGVVSGTSACTYLASQVHGLEIVHSSIALLFLFAILAIIGISESAVVALLIFAVHTITLIVLCVASIVFVIRDQGAILTSNYQAPYPDINMAGQWIDGSVWTALFFGTSTAMLGISGFETSAQFVEEQAPGVFPKTLRNMWWGVVIFNPLISFLALGVLPLSAIQAHKNTVLAAMGKAVG 336
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_002999142.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69288.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 301.6 bits (771), Expect = 3.600e-78
Identity = 173/329 (52.58%), Postives = 234/329 (71.12%), Query Frame = 0 
Query:   57 PPTFAPVGWRDRLSSKSNIETWAFPGWGRYNLQMTVTDEELAKIEADM--DHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDP-STLRENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPL---ARIVEDESVVLAKMAKHV 380
            PP  +P+       + + ++ W FPGWG ++     +D EL +I+A +  DH    KL++W ATAICGNDI++SCLYV GLV   AGK+APVAL +V+ +LYL R++Y E + A+P+NGGS+NVLLN+TSK +A+ AA+LA++SYIATGVVS TSA +YL   V     + A +GLLF+FA+L L+GI ESA VA +I + H  TL +LCV S++Y++ D   TL  N +T FPD+ L G I SG+F TA+FFG S+A+LG+SGFE+SSQFV+ QA GVF KTLRNMW G  +FNP+I+ L+LGVLPL     IV+  + VLA+M   V
Sbjct:   26 PPPLSPLMLHVNKHTNA-LKGWEFPGWGDHS-STVASDTELNEIQAHLSTDH---TKLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVPATIGLLFIFAVLSLIGITESAVVALVIFIAHATTLVVLCVLSSIYIVKDDFQTLWANFDTDFPDINLAGDIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPLIALLSLGVLPLNGPGGIVDKRNTVLAEMGLKV 349
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_012208270.1 (hypothetical protein SPRG_13946 [Saprolegnia parasitica CBS 223.65] >KDO21018.1 hypothetical protein SPRG_13946 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 298.9 bits (764), Expect = 2.300e-77
Identity = 172/313 (54.95%), Postives = 215/313 (68.69%), Query Frame = 0 
Query:   73 SNIETWAFPGWGRYNLQMTVTDEELAKIEADMDHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAI----LGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDP-STLRENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPLARIVEDESVVLAKMAKHVG 381
            S +  W FPGWGR  L       EL  I+  M  +  P L QW ATAICGNDI++SCLY  G+    AGK+APVA+ MV+ VLYL R++Y E + A+P+NGGS+NVLLN+TSK +AS AA L ++SY+ATGVVS TSA  YL   V    P LAI    + LL LFA+L ++GI ESA VA +I +VH  TL +LCV S V+VI D  + L  N   P+PD+ + G    GS  TALFFG S+A+LG+SGFE+S+QFV+ QAPGVF KTLRNMW G ++FNP+ISFLALGVLPL  I   ++ VLA M K VG
Sbjct:   30 SRVPPWDFPGWGRQLLD-AADPAELKAIDDHMASKHAP-LGQWPATAICGNDILSSCLYTAGVAAAKAGKLAPVAMGMVAAVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTSKRLASIAAALGILSYVATGVVSGTSACTYLASQV----PGLAIVHSSIALLLLFAVLAIVGISESAVVALLIFIVHTITLVVLCVASIVFVIRDQGAILSSNYQAPYPDINMAGQWIDGSVWTALFFGTSTAMLGISGFETSAQFVEEQAPGVFPKTLRNMWWGVVIFNPLISFLALGVLPLEAIQAQKNTVLAAMGKAVG 336
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_008865169.1 (hypothetical protein H310_03164 [Aphanomyces invadans] >ETW07094.1 hypothetical protein H310_03164 [Aphanomyces invadans])

HSP 1 Score: 298.1 bits (762), Expect = 4.000e-77
Identity = 162/318 (50.94%), Postives = 224/318 (70.44%), Query Frame = 0 
Query:   73 SNIETWAFPGWGRYNLQMTVTDEELAKIEADM-DHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDPST-LRENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPLARIVEDESVVLAKMAKHVG-----TWV 384
            + ++ W FPGWG  ++  +    EL +++A +   +Q  +L +W ATAICGNDI++SCLY  G+V V AGK+APVA+  V+ +LYL RY+Y E +TA+P+NGGS+N LLN+T+K IAS AA L ++SY+ATGVVS TSA  YL  V+ +   + A +GLL  FA+L ++GI+ESAG+A +I VVH  TL +LC  S V+++ + +T LR NL+  +PDV + G   SG+  TA FFG  +A+LG+SGFE+S+QFV+ QAPGVF KTLRNMW G   FNPMIS L+L VLPL  +V  +  VL+ MA+ VG     TW+
Sbjct:   45 TQVKPWEFPGWGS-SISESADPAELKELDATLAASKQAHRLGEWPATAICGNDILSSCLYTTGIVAVRAGKLAPVAMATVAAILYLYRYIYTEVVTAIPLNGGSYNALLNTTTKRIASVAAALGILSYVATGVVSGTSACTYLQSVIPLLPVVEASVGLLLFFALLSIVGIRESAGLALVIFVVHTATLIVLCAMSIVFLVKNEATILRANLSADYPDVSVAGATLSGTVWTAFFFGMCTAMLGISGFETSAQFVEDQAPGVFPKTLRNMWWGVAAFNPMISLLSLAVLPLPVVVRHKDTVLSAMARVVGGPALETWM 361
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_008865168.1 (hypothetical protein H310_03163 [Aphanomyces invadans] >ETW07093.1 hypothetical protein H310_03163 [Aphanomyces invadans])

HSP 1 Score: 296.2 bits (757), Expect = 1.500e-76
Identity = 166/312 (53.21%), Postives = 216/312 (69.23%), Query Frame = 0 
Query:   71 SKSNIETWAFPGWGRYNLQMTVTDEELAKIEADMDHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDPSTL--RENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPLARIVEDESVVLAKMAKHVG 381
            S  +++ W FPGWG+    +++ D  LA+I A +  R+ PKL +W ATAICGNDI++SCLYV GLV   AGK+APV L +V+ +LYL R++Y E + A+PMNGGS+NVLLN+TSK +AS AA+LA++SYIATGVVS TSA  YL         + A +GLLF FA L  +GI ESA VA +I VVH  TL  LC  S  +++ +   L       T +P + L G    G   +ALFFG S+A+LG+SGFESSSQFVQ QAPGVF KTLRNMW G  VFNP++SFL+LGV+PL+ +   ++ VL+KMA  VG
Sbjct:   28 SLQHMQPWEFPGWGQVT-SVSIPDSSLAEINAALKSREHPKLAEWPATAICGNDILSSCLYVSGLVAAKAGKLAPVCLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASVAASLAILSYIATGVVSGTSACTYLASTFPGIPVVGATVGLLFFFAALTCLGISESAVVALVIFVVHTLTLATLCGLSVWFIVHNRGQLLYANLFETAYPSINLAGTWIDGDVFSALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLRNMWWGVAVFNPLLSFLSLGVMPLSTMNMFKNTVLSKMALVVG 338
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_009840216.1 (hypothetical protein H257_14158 [Aphanomyces astaci] >ETV70256.1 hypothetical protein H257_14158 [Aphanomyces astaci])

HSP 1 Score: 295.0 bits (754), Expect = 3.400e-76
Identity = 165/320 (51.56%), Postives = 218/320 (68.12%), Query Frame = 0 
Query:   74 NIETWAFPGWGRYNLQMT----VTDEELAKIEADMDHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDPST-LRENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPLARIVEDESVVLAKMAKHVG-----TWV 384
            +++ W FPGWG    +      + D +   + A   HR    L +W ATAICGNDI++SCLY  G+V V AGK+APVA+ +V+ +LYL RY+Y E + A+P+NGGS+N LLN+T+K IAS AA L ++SY+ATGVVS TSA  YL  +V     + A +GLLF FA+L ++GI+ESAGVA +I VVH  TL +LC  S V++I D +  LR N +  +PDV + G    GS +TALFFG  +A+LG+SGFE+S+QFV+ QAPGVF KTLRNMW G  +FNP ISFL+L VLPL  +   +  VL+ MAK VG     TWV
Sbjct:   46 HVKAWEFPGWGSATSESADPAELKDLDATLVAATHAHR----LGEWPATAICGNDILSSCLYTAGIVAVRAGKLAPVAMAVVAAILYLYRYIYGEVVNAIPLNGGSYNALLNTTTKRIASVAAALGILSYVATGVVSGTSACTYLQSLVPSLPIVHASVGLLFFFALLSIIGIRESAGVALVIFVVHTTTLIVLCGMSVVFLIQDKAAILRANFHADYPDVSVAGATVPGSLSTALFFGTCTAMLGISGFETSAQFVEDQAPGVFPKTLRNMWWGVAIFNPSISFLSLAVLPLPILTTHKDTVLSAMAKAVGGRGLETWV 361
[Close]
BLAST of NO04G00540 vs. NCBI_GenBank
Match: XP_009840215.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV70257.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 295.0 bits (754), Expect = 3.400e-76
Identity = 165/320 (51.56%), Postives = 218/320 (68.12%), Query Frame = 0 
Query:   74 NIETWAFPGWGRYNLQMT----VTDEELAKIEADMDHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLMVSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYIATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQIILVVHIFTLTLLCVCSAVYVICDPST-LRENLNTPFPDVQLGGIIRSGSFATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPMISFLALGVLPLARIVEDESVVLAKMAKHVG-----TWV 384
            +++ W FPGWG    +      + D +   + A   HR    L +W ATAICGNDI++SCLY  G+V V AGK+APVA+ +V+ +LYL RY+Y E + A+P+NGGS+N LLN+T+K IAS AA L ++SY+ATGVVS TSA  YL  +V     + A +GLLF FA+L ++GI+ESAGVA +I VVH  TL +LC  S V++I D +  LR N +  +PDV + G    GS +TALFFG  +A+LG+SGFE+S+QFV+ QAPGVF KTLRNMW G  +FNP ISFL+L VLPL  +   +  VL+ MAK VG     TWV
Sbjct:   46 HVKAWEFPGWGSATSESADPAELKDLDATLVAATHAHR----LGEWPATAICGNDILSSCLYTAGIVAVRAGKLAPVAMAVVAAILYLYRYIYGEVVNAIPLNGGSYNALLNTTTKRIASVAAALGILSYVATGVVSGTSACTYLQSLVPSLPIVHASVGLLFFFALLSIIGIRESAGVALVIFVVHTTTLIVLCGMSVVFLIQDKAAILRANFHADYPDVSVAGATVPGSLSTALFFGTCTAMLGISGFETSAQFVEDQAPGVFPKTLRNMWWGVAIFNPSISFLSLAVLPLPILTTHKDTVLSAMAKAVGGRGLETWV 361
The following BLAST results are available for this feature:
BLAST of NO04G00540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_012208271.14.200e-7948.54hypothetical protein SPRG_13947 [Saprolegnia paras... [more]
KUF80027.14.200e-7953.80Thioredoxin [Phytophthora nicotianae][more]
XP_008620351.12.100e-7854.37hypothetical protein SDRG_15943 [Saprolegnia dicli... [more]
XP_008620352.12.100e-7854.37hypothetical protein, variant [Saprolegnia diclina... [more]
XP_002999142.13.600e-7852.58conserved hypothetical protein [Phytophthora infes... [more]
XP_012208270.12.300e-7754.95hypothetical protein SPRG_13946 [Saprolegnia paras... [more]
XP_008865169.14.000e-7750.94hypothetical protein H310_03164 [Aphanomyces invad... [more]
XP_008865168.11.500e-7653.21hypothetical protein H310_03163 [Aphanomyces invad... [more]
XP_009840216.13.400e-7651.56hypothetical protein H257_14158 [Aphanomyces astac... [more]
XP_009840215.13.400e-7651.56hypothetical protein, variant [Aphanomyces astaci]... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL077nonsL077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00540.1NO04G00540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00540.1NO04G00540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00540 ID=NO04G00540|Name=NO04G00540|organism=Nannochloropsis oceanica|type=gene|length=6225bp
CATTGCAGTACATACATTCTTTCACTCTTCTCTATTTTCCATTACTCCAT
CCGGAGGCTCACGCATATCTCCCCACCGTTGCCAGTACCACTTACCATAC
GAAGCAAGCAGCTCTTCCCCCGCCTTGATATTCCGTGTGCTGTACATGAC
GACACACGGTGGTCGCTTGCTCCGTATTCTCCTTTGACACTGGGCTGCGT
CATTCCCCTTTCCTTTCAAGACGCTGTTCGCCTTCTCATCGTAATGGTCA
AATCGCAATAACCTGCCGTAGCGCATATTGTTCTCCAGACGTGCTTGCCC
GCGAGCATCATTGACGTATCGACCCAAGTTCTGCGTCTTGGTCTCATCCC
CTCTTCCCGCACCCGATGCCAAAGCCGTGGCGCCTCCCTCGTAGCCGCTT
GAAAACGACAGCAAGGCCTCCGCATCCAAGGTCAAAGAAGGACCTACTTG
AATGCAGTACCGACCTTGCGCCTTCTCTTTTCGAAGCTCTCCATAATACA
GCACCAAGGGTTTCAGCGCCGGAAGGTCAACTGCAGTAAACAGGCCGTCT
CCCGCCCCGGGTATGAAAGAGGGTTTGACTTCTAGGCAGGGGACAAGGGC
ATCAGTGGCATGTACCAGTGCCGCAACTTCCTCAGCGTCCGTTGCCTGGA
TCCCCGACCGTAGCGTGACCATAGGCTTGTTGTGGGATGGGCCTAGGATG
TACGAAGTATCGTGACGAGTTGCTATGTCGCCGTGAAGTGGTGGTTGTGA
GAAGGAAAGCAAGCTAGCCGTCCTTACGTTCAGATAAAACACGGCATAAA
ACTAATTAGTTATTCCTGGTTTCCTTTGCCTACGCGCAGCCCAGTTGGCC
ACTTGAATAGACACATACACATAAAGACACAAAACGTAGAGCCCCGCACC
GACTGGCGTCCGAGTCGGGCAAATTGGCGTCATGTATGGTTGTTCGAGCT
TCTCTGTAGTTTCCTACAATCCCAAAATTATCGCGTGCAACCAATCCGCA
GACAAATGCAAACACCTGTATTTACACAAGCGTGCCTCCTCTTAGGATTA
AGCACGACGGAAAGCCTTCCAACGATAGATCATTGCATATTCCTCCCTTA
TTTTTGCCGAGTTTTAAATGGCTTTGACAGGGATTTCACCAGTGAAGTCC
TCGGATGGCCCATACAGGGCTAGGAGAAGGAAAAAAAAAGAGGAGGTCAG
AGGGAAGGCAACTTATACAACGTCCGCATCACCTGCCGCGATTGACCATA
CCGGAGCTCGTGGAGACGACTTTCTCCACTGAAATACTCCTAAAAAACCG
CAGGATGTTGCGTGCCGCATTGCCATCTCGAGATACGACGTGTTTACAGG
CTTCATACCAACAAAGTCCGCCGGCAAGTAAAATCCCACCACCCCTCTTT
TCCTCCTTCTCCTTCTCCTCTTCATCCTCCTTCTCCTCCTCGGCTACTGA
TGCTGCTGCTACTGCTGCTTCCCCTCCCGCCAATCCTCTACCTCTCATCC
GTCCTCCCCTCCCTCCCCTCCTTCCCACTCGTGCTCTTACTCCCACACCT
CCTCTCCCTCCTGCTCCTACTCCTACACCTCCTCTCTCTCATGCATTTCG
GTATTGTCTTTTGTCTTTCATTGTACCTCCAGATGCCTTTGATGATACCC
GTGCAAGATGTGGTACAGATACGGGAGAAAGAGCCCTTCCACTGAGGTCT
TATTCTTGACATCCAGGCAGGCAGAGCCCTCCAGTTTTAGAAGCCGTCGT
TCCTCGTTGATGAAGGATCGGACATTTTCCGGGATTGCCATCAGAGGGCC
AGCGCCGCATGCCCCCTCTCCATCCTCCCCCATCCTGCTGCTGCTGGTGC
TCGTGCTCGTGCTCGTGCTCGTGTTCGTGCCATTGTTGCTGTTGCTGTTG
CTGTTGCTGCTGCTGCAGCAGCTGCTGCTGCTGCTGCTGTTGCTATTGCT
ACTGCTGTTGCTGGTGCTATTGCCGTTGCTGTTACTCTTGCTGTCGATGT
TGCCCTTGGCGATCCTCTTACTCTTCCCCTTCCTTCTCTTCCCCTCTGCC
CTCTTCCCCACCCCCCTCCCTCATCCTTCCTCCTCTCTTCCTCTCCCCCC
TCCTCGCCTGATTGTCGTTGTGCCGCCGTTTCCGGGAGACCGCAGGTTTC
TTTCCAGCCGTTCATGAGTCATTGAGCACAGTAAGCCGACACTTCCTGTG
ACGCCAATCCATGATCTTGAAGCCAGAATTGCACAAAATCCCGTTGTCGG
CCAACAAATGAGGTCCATGTCGACGCTGCAAAATTCGTCGAGTAGAACTG
TGCCCCCATAGTGATAACCTTGTAATCACCACTGCTCAAGTGGACGTACG
GATTGAAATTTATCCTGGAAAATATCCTTGACGACTTTGCGGTAAGCCGC
GTTAGATAATTGGTGTGCAACTTCAAGCCTTCAGTGAAGCAGGCGGTTAC
GAACGTTTGGCCCAGCTTCGAAAGGGCGACTTGATTTTCGACTGGACGAT
TGTAGTTGTGTTGGAAGTTGCAATGCAACACCTCATTTACCAGGAGTGAT
GCTCTTACGATGATTTCAGACGTGTTGCGAATCTGTCGCTCCAGGCTTTC
GATGAGCACTACATTAACTGTCGGTTACTAACCAGGCGCCAGTCGTTCGG
GAAGACAACACTTTGAGCATTTCATCTTCAGTCTTCCCTGCGATCTCTTC
CGCTTGGCCCAATCCGGTCGCTTGGTTTTAGCAGTCTCAGTTGACGAGGA
CATTTCTGTATTTTTGGAGGTAAAAAAGGGAGGGTTATTTAGAACGGTGA
AAATCTGGTTAAGAAACTCGATTGCCGTATTCAAAGGATCATGACTCCAT
CTCAATAGACCAAGGCACACAAATGAAGACGATGTCCGCATAAAAGCTCG
TCGCCCCGAGAAAGGCGTGCTGAGATAAAAAGTGGGTTGGATGGGGCTAC
GAATAGTAGGCGCCAATTACTCATCCTGATGGTGAACAGATGTGCAGTGG
GTAGGCAAGGTGCCCCCTTTGGTCTAATGACCCTTCTCTCGAAGGGTGCG
GTGTTGTCCGCGGCACAAGGGCGAAAATAGGGTGTCGCCGCGGTGCTGAT
AGGACAGGGAGAGGATGGTATGAGGCGGGTATGGCCAGGGAAGGAAATGC
TATGCAAGGGAGGTGGCGCCACGCACGCTTGTCTCGACGCCCACTGTCAC
ACTGGTGGTGCTATGATGCTGTCTTTCGCTTCCAGTCTGGCGTGGAGGGC
CTTCTGTGGGAGTGTTGCTTCGCGGTGTGTGGTGGTGGTTGGGTGCTGGT
GGGGGATGTGGGGGTGGATGCGGCAGCAGTGAAGGAAGCAGCGAGCCAAA
TGCTATGCAAGGAAGGCGGCGCCATGCACGGTTGTCTTAGCTCTTGGGAG
GAGGGGAAGGCATTCTACAGCACCTTATAAACCACTGTGCTGGTAGTGCA
GCAGCTGTTGCTCAACATGCAACAAATAACCTGGAGTAGCCTGAAGCCAA
CACCCTTGTAGCGTGACGCGTGCCTTGTCTCGGGATGCCCAAAAAACTAG
TCAACATATTTTTGCACACTTTGATACAATTTAAGCCTAACCATTGTTTG
CATCGATCTCACGAAAGAATCAATAAAATCACAACTACGGCTAAATGAAA
GTCCACATCGTCTCTTATTGGAGAATAATCTTGCGACCAATGAAAGCCCA
TAGCAGTGTATTCTGTAGCCGGCCATCTTACCCGATAACAATAATAGGCA
TATGTTGATGACAAATATTAGCTCATTCTATGCAAGTGTTTTTACGAACA
CACATTCACGCACAATTAACAATGCACACCACGCATCATACCCCGTCTAG
TGGAGTGCTACCTACCAGATGGGTACTTACTCCCACAAAAAAGAGGGGCA
TAGTTCTTAAGGGTTTATCATAAGGGCCTTTATCAAAAAGTACCTCACCC
GGGCTCGGAAGCCTGTCTCCCAATGCAATACAAATTCCTTGCCTTCCGCT
CCTCGGGCCAGGTCACGAAAGCGTCGTGAGTCGTAATCAACTATGAGCCT
CACCGACACATCCGCCCAGGCTTATAAAATTCACTCCTCTTCCTTGGATC
AGGTCATCAATGAAAGCGTGGTGCGTCATTATCAAGAATACCATCTTTAA
CCAACCAGGATTGCAAGTCTGTCTCCACGTCGTCGGGCCAGTTCGCTAAT
GAAAGCATCGTGAGTCGTAATCAACAGTGAGGCAGCACGCCCACTGAAGT
TCACCAGCCTGCCTCCCATGCCTCAACAGCCAGAGCATCACTTTATATAT
TGAAATGATACGAAACGAAAGGAGGAGGAAAATACCGGATAGAGGAATGA
AGGGGCGGTAAATTTGGACGACCGCCGCCGGCCCGCATGGATGCATCCTG
TAAGGTGGTAATGATAGTGATATGCCATACCGTAAAAATGATGATCCTTG
GAACCCAAGAAAAGCTGGACAATCATCAGGTCACACGTGTGTGTGCGATG
GTCTCCCAATTTTTCTTTTCCTCTTCGGGCCTGGACAATATCATGCCCTA
CCTTTTCTCTCCCCCATCCCCTCTCAAACACCAATCGATTCATTCTCCTG
GTTGTTTGAGTGTGCACTTGCTCTGCTATCCACAGCCTTGGGAGTGTAAC
TTCTTGTGCCGGTCCTGTCCGTTCTCAATATCCACTTCAACCCACAATGT
ACATGCAGGCACCACGAACATACCTTTCCGGCGGTGCTTTCCGCTGCGTC
GCCACCTTGACCGTGCCTTCCCACCCCTGCCTGCCGCTCCAGAGACCGTC
CTGGCAACTCGATAACCCAGCCGACGTCCTTCGATCTCTCCTTATCTTGG
CCCTGCATCAAACCACCACCATAAACTCGTAATGTCTAAGCAACGAAAGG
CGCCACTCCAACCTGGTGCCACATCGCCCACAGAGGCCGTGCCCTTGCTG
TCCCGCACCGAATCCATTGAATCGTGGGGCCTCTCCAACCCCCACGAACT
GCTCGTTTCCGCCTCTTCTCATCAGCAGCACTCGCATGAATTGCACCGGC
CTCCCACCTTCGCTCCTGTCGGCTGGCGGGACCGCCTCTCCTCTAAGAGC
AACATCGAGACCTGGGCCTTTCCTGGATGGGGTCGCTATAATCTGCAAAT
GACTGTGACGGACGAGGAGCTGGCAAAAATTGAGGCAGACATGGACCATC
GACAACCCCCTAAACTGAATCAATGGGAGGCGACGGCGATTTGTGGGAAT
GACATCATGGCCAGTTGCTTGTATGTGGTGGGGCTAGTGACGGTGTCTGC
TGGGAAGATGGCGCCTGTGGCGTTATTGATGGTGTCGTGTGTGTTGTATT
TGATCAGgtaaggtacatggggcgcatgatatgatataggataagaaaaa
gcctggggggaagggaggtccgttttacctttaatatgctttgacctcac
ctccctctccctttcccctcccgcgcccttccatcctttcccctcccgcg
cccttccatctcctagATATCTCTATGCTGAGGCGATCACTGCCCTGCCA
ATGAACGGCGGCTCGTTTAATGTTCTCCTCAATAGCACCAGCAAGGGCAT
CGCTTCCTTTGCCGCTACTCTTGCCCTCGTCTCGTACATCGCCACGGGCG
TGGTGTCTGCAACCAGTGCCATTGATTACTTGGACAAAGTCGTTAGGGTC
CCGCATCCCTTGCTAGCTATCCTGGGGCTCTTGTTCCTATTTGCGATGCT
TGTTCTGATGGGGATTAAGGAAAGCGCGGGTGTGGCGCAGATTATTCTCG
TCGTGCACATTTTCACGCTTACCCTCCTCTGTGTCTGTAGCGCCGTCTAC
GTCATCTGTGACCCCTCTACACTCCGCGAGAACCTGAATACACCCTTTCC
TGACGTCCAACTTGGTGGGATCATCCGTTCGGGATCCTTCGCCACGGCAT
TATTTTTCGGGTACAGTAGCGCGATCCTGGGTGTGTCTGGTTTCGAGAGT
TCGTCGCAGTTTGTTCAGTCCCAAGCGCCGGGGGTGTTCTTGAAGACATT
GAGGAATATGTGGGTGGGTGCCATTGTATTTAACCCGATGATCTCGTTTT
TGGCTCTCGGGGTGCTGCCGCTTGCGAGGATTGTGGAGGATGAGTCGGTG
GTCTTGGCGAAGATGGCCAAGCACGTAGGGACATGGGTGGTAGGCAGGGG
GGGGGGGATGGTGGAAATGGGTTAG
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protein sequence of NO04G00540.1

>NO04G00540.1-protein ID=NO04G00540.1-protein|Name=NO04G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MSKQRKAPLQPGATSPTEAVPLLSRTESIESWGLSNPHELLVSASSHQQH
SHELHRPPTFAPVGWRDRLSSKSNIETWAFPGWGRYNLQMTVTDEELAKI
EADMDHRQPPKLNQWEATAICGNDIMASCLYVVGLVTVSAGKMAPVALLM
VSCVLYLIRYLYAEAITALPMNGGSFNVLLNSTSKGIASFAATLALVSYI
ATGVVSATSAIDYLDKVVRVPHPLLAILGLLFLFAMLVLMGIKESAGVAQ
IILVVHIFTLTLLCVCSAVYVICDPSTLRENLNTPFPDVQLGGIIRSGSF
ATALFFGYSSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAIVFNPM
ISFLALGVLPLARIVEDESVVLAKMAKHVGTWVVGRGGGMVEMG*
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Synonyms
Publications