NO04G00020, NO04G00020 (gene) Nannochloropsis oceanica

Overview
NameNO04G00020
Unique NameNO04G00020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3230
Alignment locationchr4:7818..11047 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:7818..11047 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR032719WbsX
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_034691458.1 (hypothetical protein [Chryseobacterium sp. CF365])

HSP 1 Score: 127.9 bits (320), Expect = 1.600e-25
Identity = 103/399 (25.81%), Postives = 176/399 (44.11%), Query Frame = 0
Query:  495 RHIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFETVLK----DFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLNLVKYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIVDGREGTYPGFPGYYLHANYKSPKSTVFMKTSTRPQHIDYKAYV-----------------RKFLPK------EEKLGD------NSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            + I+P A + PQ+HP+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  E+  +Q Q+AK YG+ GF  Y+YWF            +++++R    VLK    DF   F + NE W+  +  G  +           +++  +   L+ +FK + Y K+ N+PLF ++ P+ + + +   +    + + RENGF G+ ++   +      F        Y S  S  F K      HI+ K Y+                 +K  PK      +E + D      N  T   +  N+DNT R             G + + ++        LF++ ++        K +   Q  ++ +WNEW E  +LEP  + GF YL A ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVSKAKPLFEGHEQPIFPADLGYYDL-RVPEVREQQAQMAKDYGVHGFIFYHYWFGSG---------KQLLERVANDVLKSGKPDFPFCFCWANETWS-GIWHGLSEKILAEQTYPDEQDLIAHFEYLLPFFKDERYIKVDNKPLFIIYDPNHLNEGDPHYISKFRE-LARENGFDGLYVMASNKLSDAIDFQS----MGYDSKISNAFQKAWV--PHINKKEYISHSQYYKNRIKGLIGFKKKEQPKVRIQDAQEVVNDLKFEESNVPTYPCILPNWDNTPR------------SGYRGIILSNNSPE---LFEQQVEKAAKYLEDKKEYPEQFLIVKSWNEWAEGNILEPDRKNGFGYLNALKKIL 367          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_079240160.1 (lipopolysaccharide biosynthesis protein [Chryseobacterium indologenes])

HSP 1 Score: 127.9 bits (320), Expect = 1.600e-25
Identity = 103/399 (25.81%), Postives = 176/399 (44.11%), Query Frame = 0
Query:  495 RHIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFETVLK----DFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLNLVKYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIVDGREGTYPGFPGYYLHANYKSPKSTVFMKTSTRPQHIDYKAYV-----------------RKFLPK------EEKLGD------NSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            + I+P A + PQ+HP+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  E+  +Q Q+AK YG+ GF  Y+YWF            +++++R    VLK    DF   F + NE W+  +  G  +           +++  +   L+ +FK + Y K+ N+PLF ++ P+ + + +   +    + + RENGF G+ ++   +      F        Y S  S  F K      HI+ K Y+                 +K  PK      +E + D      N  T   +  N+DNT R             G + + +         LF++ ++  +     K +   Q  ++ +WNEW E  +LEP  + GF YL A ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVSKAKPLFEGHEQPIFPADLGYYDL-RVPEVREQQAQMAKDYGVHGFIFYHYWFGSG---------KQLLERVANDVLKSGKPDFPFCFCWANETWS-GIWHGLSEKILAEQTYPDEQDLIAHFEYLLPFFKDERYIKVDNKPLFIIYDPNHLNEGDPNYISKFRE-LARENGFDGLYVMASNKLSDAIDFQS----MGYDSKISNAFQKAWV--PHINKKEYISHSQYYKNRIKGLIGFKKKEQPKVRIQDAQEVVNDLKFEESNVPTYPCILPNWDNTPR------------SGYRGIILANNSPE---LFEKQIEKAVEYLEDKKNYPEQFLIVKSWNEWAEGNILEPDRKNGFGYLNALKKIL 367          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_029297951.1 (LPS biosynthesis protein [Chryseobacterium hispalense])

HSP 1 Score: 127.1 bits (318), Expect = 2.700e-25
Identity = 105/400 (26.25%), Postives = 178/400 (44.50%), Query Frame = 0
Query:  495 RHIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFETVLKDFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLN-------LVKYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIV-----DGREGTYPGFPG------------------YYLHANYKSPKSTVFM--KTSTRPQHI--DYKAYVRKFLPKEEKLGDNSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            + I+P A + PQ+HP+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  ++  +Q Q+AK YG+ GF  Y+YWF +     K  + + + +    +   DF   F + NE W+     G   G   +A    AE +  N  +       L+ +FK + Y KI N+PLF ++HP  + + +   +    + + ++NGF  + ++      D  +    G+ G                  Y  H  Y   + T  +  K   +P+ +  D KA V       + +  N  T   V  N+DNT R             G + + +T T      LF++ ++  +     K+D   Q+ +I +WNEW E  +LEP  + GF YL   +  L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVAKAKPLFEGHEQPIYPADLGYYDL-RVPQVREQQAQMAKDYGLYGFIYYHYWFGN-----KKQLLETIANEVLTSGKPDFPFCFCWANETWS-----GIWHG---LAEKILAEQVYPNEQDLTDHFNYLLPFFKDERYIKIDNKPLFIIYHPSHLDEGDPHYISKFRE-LAKKNGFDDLYVMASNKLRDDIDLKSMGYDGKISNAFQKAWIPYIKKGEYISHYQYYKNRITELLGFKKKIKPKVLTQDAKAIVNDL----QFVESNVPTYPCVLPNWDNTPR------------SGYRGVVLTDTSPE---LFEKQIEKAITYLEDKNDYPEQLLIIKSWNEWAEGNILEPDRKYGFRYLNTLKRIL 367          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_071120428.1 (hypothetical protein [Romboutsia timonensis])

HSP 1 Score: 127.1 bits (318), Expect = 2.700e-25
Identity = 118/410 (28.78%), Postives = 192/410 (46.83%), Query Frame = 0
Query:  475 IINCVQNNHNRFSKHFAEIHR----HIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTP-LKNLLGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQK--NMVFQEVIDRFFETVLKDFSVFFVYC--NEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLNLVKYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIVDGREG------TYPG------FP--GYYLHANYKSPKSTVFMKTSTRPQHIDYKAYV-RKFLPKEEKLGDNSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERLL 861
            I+N   N  NR     + I R     ++  A + PQFH IPEN+  + EG+T+ TN+  A  +      P +   LG+Y+L  N E++ RQI++AK YG+ GF  ++YWF+   + +K  NM+ +           KD  + F  C  NE WT+   +        IA  ++ E+    + ++ KYF    Y KI  +P+  ++      + E  +++      M ++G+ GI LI  G +G      T  G      FP  G Y + NY S + + F   + +   +DY  YV  K   KE+K  +  +   ++  ++DNT R             GNK+     +      L+K++L   ++    K +   Q   INAWNEWGE   LEP  + G++YL + +E +L
Sbjct:   33 ILNEESNLGNRSISENSTIFRLKSDDVKLIAFYLPQFHQIPENDKWWGEGFTEWTNVKKAIPQFKGHYQPHIPGELGYYNL-TNKEVMKRQIELAKQYGVYGFCFHHYWFAGKRLLEKPVNMLIEN----------KDLDIPFCLCWANENWTRR--WDGLDNEVLIAQKHSPEDDINFIEDISKYFNDTRYIKIDEKPVLIVYRIELFPNPEDTIVR--WRKWMEDHGYKGIYLI--GAQGFACKNPTKYGLDAAVEFPPNGMYKY-NYISSQVS-FKNPNFKGNIVDYSYYVNNKLYLKEDK--EKYNLFKTIIPSWDNTPR------------RGNKSTIFYNSSPE---LYKQWLKDIIIYTKTKKNKDEQFVFINAWNEWGEGAYLEPDVKYGYSYLNSTKEAIL 406          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_050890721.1 (hypothetical protein [Lactobacillus delbrueckii] >KNE30004.1 hypothetical protein LDI10_08320 [Lactobacillus delbrueckii subsp. indicus] >KRL75844.1 glycosyltransferase [Lactobacillus delbrueckii subsp. indicus DSM 15996] >APP03579.1 hypothetical protein LI610_09230 [Lactobacillus delbrueckii subsp. indicus])

HSP 1 Score: 126.7 bits (317), Expect = 3.500e-25
Identity = 105/382 (27.49%), Postives = 177/382 (46.34%), Query Frame = 0
Query:  500 YAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNLLGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSD--NSVSQKNMVFQEVIDRFFETVLKDFSVFFVYCNEAWTKNVAFGTHKGGYT------IANNYTAENI-------RMNMLNLVKYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIVDGREGTYPGFPGYYLHANYKSPKSTVFMKTST-------RPQHIDYKAYVRKFLPKEEKLGDNSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            +A + PQFH IPEN+  + +G+TD  +   AK   P    P K L   Y  + N E I  Q ++AK YGI+GFAIY+YWF D  N ++    + +E  D        D   FF++ N++W K  +  T    +T      I     AE +       + +   L+ +FK   Y K+ N+P+F L   +++ DT +++ +   + + +E+GF G+E I+   +     F   +++  +       +++          + +  DY +  ++ L   +K+G N  T  S F +FD+T R   +         GN  +  T  +  K   F + LD+   K        + + L+ AWNEWGE   LEP    G+ YL+A +  +
Sbjct:    4 FANYLPQFHQIPENDQYWGKGFTDWVSCKNAKPLFPGHQQPKKPLNDNYYSLDNVEAIRWQAKLAKKYGISGFAIYHYWFHDGLNLLTTPPTLIRENKD-------IDIEYFFIWDNKSWKKTWSALTGGASWTGDAKASIKTEVLAELVYGREKEWKAHFNYLLPFFKDDRYLKVDNKPVFALFTTYKVYDTLMEMWE-YWNKLAKESGFDGVE-IISRADYKQKKFANQFIYTPFAPVTIGDYVRQKVKRIIGKEKVKKYDYDSVWKRILKVSKKVGKN--TTLSGFVDFDDTPRRGNN---------GNVVVGATPEKFEK--YFSKLLDIAKSKG-------NDVVLLTAWNEWGEGCYLEPDTINGYEYLKALKRAI 356          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_072884018.1 (lipopolysaccharide biosynthesis protein [Chryseobacterium takakiae] >SHE69833.1 Glycosyltransferase WbsX [Chryseobacterium takakiae])

HSP 1 Score: 126.3 bits (316), Expect = 4.600e-25
Identity = 101/398 (25.38%), Postives = 177/398 (44.47%), Query Frame = 0
Query:  495 RHIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFETVLKDFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLNLV-------KYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIV-----DGREGTYPGFPG------------------YYLHANYKSPKSTVFM--KTSTRPQHIDYKAYVRKFLPKEEKLGDNSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            + I+P A + PQ+HP+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  E+  +Q Q+AK YGI GF  Y+YWF +     +  + + + +    +   DF   F + NE W+     G   G   +A    AE +  N  +L+        +FK + Y K+ N+PLF ++HP+ + +     +     ++ +ENGF  + ++      D  +    G+ G                  Y  H  Y   + T  +  K   +P+ +   A  +  +   + +  N  T   +  N+DNT R             G + + +T T      LF++ ++  +     K+D    + +I +WNEW E  +LEP  + GF YL+  +  L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVTKAKPLFEGHDQPIYPADLGYYDL-RVPEVREQQAQMAKEYGIHGFIYYHYWFGN-----RKQLLERIANDVLTSGKPDFPFCFCWANETWS-----GIWHG---LAEKILAEQVYPNDQDLIDHFNYLLPFFKDERYIKVDNKPLFIIYHPNHLNEGAPHYISKF-RALAKENGFDDLYVMASNKLRDDIDLKSMGYDGKISNAFQKAWIPYIKKGEYISHYQYYKNRITELLGYKKKNKPKVLTQDA--QAIVNDLQFVESNVPTFPCLLPNWDNTPR------------SGYRGVVLTNTSPE---LFEKQIEKAIAYLEDKNDYPEHLLIIKSWNEWAEGNILEPDRKYGFGYLDTLKRIL 367          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: SIQ71295.1 (Glycosyltransferase WbsX [Chryseobacterium sp. RU33C])

HSP 1 Score: 125.9 bits (315), Expect = 6.000e-25
Identity = 102/400 (25.50%), Postives = 180/400 (45.00%), Query Frame = 0
Query:  495 RHIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFETVLKDFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLNLV-------KYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIV-----DGREGTYPGFPG------------------YYLHANYKSPKSTVFM--KTSTRPQHI--DYKAYVRKFLPKEEKLGDNSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            + I+P A + PQ+HP+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  ++  +Q Q+AK YG+ GF  Y+YWF +     +  + + + +    +   DF   F + NE W+     G   G   +A    AE +  N  +L+        +FK + Y K+ N+PLF ++HP  + + +   +    + + ++NGF  + ++      D  +    G+ G                  Y  H  Y   + T  +  K   +P+ +  D KA V       + +  N +T   V  N+DNT R             G + + +T T      LF++ ++  +     K+D   ++ +I +WNEW E  +LEP  + GF YL   ++ L
Sbjct:    3 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVAKAKPLFEGHDQPIYPADLGYYDL-RVPQVREQQAQIAKDYGVHGFIYYHYWFGN-----RKQLLERIANDVLTSKKPDFPFCFCWANETWS-----GIWHG---LAEKILAEQVYPNEQDLIDHFNYLLPFFKDERYIKVDNKPLFIVYHPEHLNEGDPYYISKFRE-LAKKNGFDDLYVMASNKLRDDIDLKSMGYDGKISNAFQKAWVPYIKKGEYISHYQYYKNRITELLGFKKKIKPKVLTQDAKAVVNDL----QFVESNVATYPCVLPNWDNTPR------------SGYRGVVLTDTSPE---LFEKQIEKAIDYLEDKNDYPEKLLIIKSWNEWAEGNILEPDRKYGFGYLNTLKKIL 368          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_076596039.1 (lipopolysaccharide biosynthesis protein [Chryseobacterium sp. RU33C])

HSP 1 Score: 125.9 bits (315), Expect = 6.000e-25
Identity = 102/400 (25.50%), Postives = 180/400 (45.00%), Query Frame = 0
Query:  495 RHIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFETVLKDFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLNLV-------KYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIV-----DGREGTYPGFPG------------------YYLHANYKSPKSTVFM--KTSTRPQHI--DYKAYVRKFLPKEEKLGDNSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            + I+P A + PQ+HP+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  ++  +Q Q+AK YG+ GF  Y+YWF +     +  + + + +    +   DF   F + NE W+     G   G   +A    AE +  N  +L+        +FK + Y K+ N+PLF ++HP  + + +   +    + + ++NGF  + ++      D  +    G+ G                  Y  H  Y   + T  +  K   +P+ +  D KA V       + +  N +T   V  N+DNT R             G + + +T T      LF++ ++  +     K+D   ++ +I +WNEW E  +LEP  + GF YL   ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVAKAKPLFEGHDQPIYPADLGYYDL-RVPQVREQQAQIAKDYGVHGFIYYHYWFGN-----RKQLLERIANDVLTSKKPDFPFCFCWANETWS-----GIWHG---LAEKILAEQVYPNEQDLIDHFNYLLPFFKDERYIKVDNKPLFIVYHPEHLNEGDPYYISKFRE-LAKKNGFDDLYVMASNKLRDDIDLKSMGYDGKISNAFQKAWVPYIKKGEYISHYQYYKNRITELLGFKKKIKPKVLTQDAKAVVNDL----QFVESNVATYPCVLPNWDNTPR------------SGYRGVVLTDTSPE---LFEKQIEKAIDYLEDKNDYPEKLLIIKSWNEWAEGNILEPDRKYGFGYLNTLKKIL 367          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_105700605.1 (lipopolysaccharide biosynthesis protein [Chryseobacterium sp. MYb7] >PRB06848.1 lipopolysaccharide biosynthesis protein [Chryseobacterium sp. MYb7])

HSP 1 Score: 125.2 bits (313), Expect = 1.000e-24
Identity = 106/398 (26.63%), Postives = 179/398 (44.97%), Query Frame = 0
Query:  495 RHIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFETVLK----DFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLN-LVKYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIVDGREGTYPGFPGYYLHANYKSPKSTVFMKT----STRPQHIDYKAYVRK------FLPKEEK-----------LGD------NSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            + I+P A + PQ+HP+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  E+   Q Q+AK+YG+ GF  Y+YWF +          +++++R    VLK    DF   F + NE W+  +  G  +    +   Y +E   ++    L+ +FK   Y K+ N+PLF ++ P+ +     Q ++   + + +ENGF  + ++   +      F        Y S  S  F K       + +HI +  Y +K       L K+E+           + D      N +T   V  N+DNT R             G + + +T        LF++ ++        K D   Q  ++ +WNEW E  +LEP  + GF YL A ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVGKAKPLFEGHDQPIYPADLGYYDL-RVPEIREAQAQMAKNYGVHGFIYYHYWFGNG---------KQLLERIANDVLKSGKPDFPFCFCWANETWS-GIWHGLSE-KILVEQVYPSEQDLIDHFEYLLPFFKDSRYIKVDNKPLFIIYDPNHLNKEAPQYIEKFRE-LAKENGFDDLYIMASNKLSDDLDFKS----MGYDSKISNAFHKAWNPHIQKKEHISHSQYYKKRIKGLIGLQKKEQPKVRTQDAGTVVNDLQYEESNVTTYPCVLPNWDNTPR------------SGYRGIILT---DNSPELFEQQVEKAAKYLEDKKDYPEQFLIVKSWNEWAEGNILEPDRKYGFGYLNALKKIL 367          
BLAST of NO04G00020 vs. NCBI_GenBank
Match: WP_047422312.1 (hypothetical protein [Chryseobacterium sp. YR480])

HSP 1 Score: 124.8 bits (312), Expect = 1.300e-24
Identity = 105/402 (26.12%), Postives = 175/402 (43.53%), Query Frame = 0
Query:  495 RHIQPYAIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPL-KNLLGFYDLMQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFETVLK----DFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLNLVKYFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIELIVDGREGTYPGFPGYYLHANYKSPKSTVFMKTSTRPQHIDYKAYV-----------------RKFLPKEEKLGDNSSTINS-------------VFTNFDNTVRFYAHDEDRQFEGV--GNKAMFMTRTQGRKVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFAYLEAFQERL 860
            + I+P A + PQ+HP+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  E+  +Q Q+AK YG+ GF  Y+YWF +          +++++R    VLK    DF   F + NE W+  +  G  +           +++  +   L+ +FK   Y K+ N+PL  ++ P+ + D +   +    + + +ENGF G+ ++   +      F        Y S  S  F K      HID K Y+                 +K  PK  ++ D  + +N              +  N+DNT R         + G+   N +  +   Q  K A + E           K D   Q  ++ +WNEW E  +LEP  + GF YL A ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVGKAKPLFEGHEQPIYPGDLGYYDL-RVPEVREQQAQMAKDYGVHGFIYYHYWFGNG---------KQLLERVANDVLKSGKPDFPFCFCWANETWS-GIWHGLSEKILAQQVYPDEQDLAAHFEYLLPFFKDDRYIKVDNKPLIIIYDPNHLNDGDPHYISKFRE-LAKENGFDGLYVMASNKLRDDLDFKS----MGYDSKISNAFQKAWI--PHIDKKEYISHSQYYKNRIKGLIGIKKKEQPK-VRIQDAQAVVNDLKFEESNVPTYPCILPNWDNTPR-------SGYRGIILANNSPEIFEQQVEKAAKYLE----------DKKDYPEQFLIVKSWNEWAEGNILEPDRKNGFGYLNALKKIL 367          
The following BLAST results are available for this feature:
BLAST of NO04G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_034691458.11.600e-2525.81hypothetical protein [Chryseobacterium sp. CF365][more]
WP_079240160.11.600e-2525.81lipopolysaccharide biosynthesis protein [Chryseoba... [more]
WP_029297951.12.700e-2526.25LPS biosynthesis protein [Chryseobacterium hispale... [more]
WP_071120428.12.700e-2528.78hypothetical protein [Romboutsia timonensis][more]
WP_050890721.13.500e-2527.49hypothetical protein [Lactobacillus delbrueckii] >... [more]
WP_072884018.14.600e-2525.38lipopolysaccharide biosynthesis protein [Chryseoba... [more]
SIQ71295.16.000e-2525.50Glycosyltransferase WbsX [Chryseobacterium sp. RU3... [more]
WP_076596039.16.000e-2525.50lipopolysaccharide biosynthesis protein [Chryseoba... [more]
WP_105700605.11.000e-2426.63lipopolysaccharide biosynthesis protein [Chryseoba... [more]
WP_047422312.11.300e-2426.12hypothetical protein [Chryseobacterium sp. YR480][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR085ncniR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00020.1NO04G00020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|612003gene_10645Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00020.1NO04G00020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00020 ID=NO04G00020|Name=NO04G00020|organism=Nannochloropsis oceanica|type=gene|length=3230bp
CCCACATTATTTTTGCGTAACCGTTAAAGCACGAAGCGACTCGCTCGGGA
AAACACATAGGGTTGCGTCGATGGTCGTAACCCACATCAGCAGTAGGCGG
AGATCCTATCGCCCTCCATCCGATGGTGATATTGTGGTTGCATGAAAGTC
CTTAGAGGTCATGGTCTTATGCGAGGGGCAAGCAACAAGCGAGGCCGTTC
TCATTCCAAACTTTTGCTCTCTCGTCTCACTCTTCCCACCTGGCGATTCA
AGCGCCTACAAAAACGCGTCACCTCGATGATTCGGGGGCTGTACCAAATA
TGGAACCAGTCATGGACGTATGGTTGAATTACATCGTATGATATCCTCGT
TTTTAATATCCCCACATCTGTAGGCGGCTTCAGCAAGATATGGTGGGAAG
GTCTAATTCTGACCGGCAGTCAAGACAAGGCGTGCGACAGAACCTCTTTG
GACATTCAGAACGCAAACGTTTAAGCAGCAAGAGTATGCGTGCGGGGAGC
ATCTATAGGAAAAGGGTTATATCGGCTTTCCTGTTGGGCTCGTTCTTGCT
AATCATCGGGCAAACTGTGATGATAATGAACAATAGAGAGACAACAAATT
TTTTCTTACGAACAGACTTGCCAGAACGCCTGTTTCATAACACTCATTTT
AGCTCAGGAAGGCCAACAGCTGCTGGGGACGAGCACAGGAGTGATAGCTA
CAACGTGACGAGACGTACCCCCTCAAGACGACATCAAGAACATGAGAAGG
CTTTATCGTGTGCATCCCCCATCGTCGGGGTCAGGGTACGAGTATTTTAT
GTATCGGAAACCCAATCTGGCGGATCAAGGAAGTATATTCAAGATCTAAT
TCGGCATTACAGCTTGTATGGAATTGAGTTTCATAGGCTTTCGAGCAAGG
CAGCTGCTTTAGAAGCAACGGACAAATTTATGGAAAACGACATTCTTCTG
GTTCAATATCTTTTGTACACAGATTTCACATTTGACGACATTTATGACCT
GGTCGAAACTTACCGGCTACGTCTGGTTGTCCCGATCCACGATATGTACT
TTCTTTCTGACGAGTCGTTGGAATATGAATATGATCCAATCATCCACTCT
GCTGACCAGGGGAAAAAACTCAGCGCAAAGCAAAGGCTTTTTCTAGAGAA
AGCAGATCACATTATTTTTCCGTCTGCTTACATCTATGACGTATTTCGCG
AGGCTATCGAGCTTAAGTCCATGGTTGTGGTCCCACATATTGACCAGAAA
TTATATCGTCGTACGTATATTCCTGCACTCAAGGCCAACATCAATATAGG
CATCATCACCGAAGCATCTCACACCAAGGGGCTGGGTCTACTGAAGAAGC
TTTATCGATATGGGAGAAGGAAGGGAACGGACCGCGTCAAATTTTTCGTT
TACTCTAAGTATGACAACAAAGGAGAGCCAAATGTCTTTGTTCGAGGAGA
GTACATGGAAAACGACATTTATCGCAAATTGAAGCAGGACAAAGTTCACG
GTCTATTGTTTCTAAACAACTACCCTGAGACATATAGTTATGCTTTGACC
AAAGGGATCAATTCAGGACTGCCAATCCTCTACACAAACATAGGTGCTAT
TGCAGATCGGGTCGCTGCGGAGAACAACACCGCAAAATATATTGCCACTG
ACAATACTGATGTGACTCAAAAGTTTGACTCTTTGCTAACCTTTATTCGA
AAGCACGCTGGACTGGGAGAAAAGGACCAGACGTTATCCGTGCTTGAAAA
GGAGAACCTCGTCGAAATACCAGTATTCTACGACAGTCTCTTTTTTAGAA
GCGCTTTGGATATCATTAATTGCGTGCAAAACAACCACAACCGTTTTAGC
AAGCATTTTGCCGAGATCCATCGCCATATTCAACCCTATGCCATATTTTT
CCCTCAATTTCATCCCATCCCTGAAAATAACATCAACTTTTATGAAGGCT
ATACGGATATGACGAATTTAGTCGCAGCCAAGCTGGAGGATCCCAGCTTA
TTGACACCGCTGAAAAATCTCTTGGGCTTTTACGATTTGATGCAAAATAA
TGAGATGATTCCAAGACAAATTCAGGTTGCAAAATCATATGGCATAGCTG
GATTCGCCATTTATTACTATTGGTTCAGCGACAATTCCGTCAGTCAAAAA
AACATGGTCTTCCAAGAGGTAATAGACCGATTTTTTGAAACTGTCTTAAA
GGATTTCTCAGTCTTCTTTGTGTATTGTAACGAAGCATGGACCAAGAACG
TGGCTTTTGGAACCCATAAAGGTGGATACACGATTGCAAATAACTATACT
GCAGAGAACATCAGGATGAATATGCTCAATCTCGTCAAGTATTTTAAGCA
CCAAAATTATCGCAAAATCGGAAATCGGCCACTCTTCTTCTTGCATCATC
CGCATGAAATGACAGATACTGAGATTCAATTGCTGAAGGCAGTAGGTGAT
TCAGTAATGAGAGAGAACGGTTTTTATGGAATTGAACTAATCGTGGACGG
CAGGGAAGGGACGTACCCAGGTTTTCCTGGGTACTACTTGCATGCAAACT
ACAAGTCACCAAAATCCACTGTGTTCATGAAGACCTCAACCCGCCCCCAG
CATATCGACTACAAAGCGTATGTGCGCAAATTCTTGCCGAAGGAAGAGAA
GTTGGGAGACAATTCTAGCACGATAAATTCAGTTTTTACAAATTTTGACA
ACACCGTGCGTTTTTATGCACACGACGAGGACCGGCAATTCGAGGGTGTG
GGCAACAAGGCAATGTTCATGACACGGACTCAAGGAAGGAAGGTCGCGCT
TTTTAAGGAGTTCTTAGATGTGCAACTTGTGAAATACTCTCAAAAGTCTG
ATCCCATTTCACAGATATTCCTCATCAATGCTTGGAACGAATGGGGTGAG
CAAATGGTGTTGGAGCCGTCGAATGAAGAGGGATTTGCGTACCTTGAAGC
TTTTCAGGAGAGGTTATTGCTCGCCCCTCTTTCAGATAGCGTACATAGCA
GTGCATCGAGTAGATTGGGTGGAAGGGGAATACATTCATGATAAGCTAAG
AGTAAGTGTATTTCCATAGAAAACGGAGTCAAATCCTTGGACTCCAAGGA
ATCCATGGAAGAAAGGGGAGGGAGAGTCCAAACCAAGGGGTGGGCCTCAA
AACGTAACGCTAGCTCGTAATGAAATGTATGAAAAGAAAAGCGTAGACGT
CTATTATTATAACTACATTATTCACAGCAT
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protein sequence of NO04G00020.1

>NO04G00020.1-protein ID=NO04G00020.1-protein|Name=NO04G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=884bp
MVGRSNSDRQSRQGVRQNLFGHSERKRLSSKSMRAGSIYRKRVISAFLLG
SFLLIIGQTVMIMNNRETTNFFLRTDLPERLFHNTHFSSGRPTAAGDEHR
SDSYNVTRRTPSRRHQEHEKALSCASPIVGVRVRVFYVSETQSGGSRKYI
QDLIRHYSLYGIEFHRLSSKAAALEATDKFMENDILLVQYLLYTDFTFDD
IYDLVETYRLRLVVPIHDMYFLSDESLEYEYDPIIHSADQGKKLSAKQRL
FLEKADHIIFPSAYIYDVFREAIELKSMVVVPHIDQKLYRRTYIPALKAN
INIGIITEASHTKGLGLLKKLYRYGRRKGTDRVKFFVYSKYDNKGEPNVF
VRGEYMENDIYRKLKQDKVHGLLFLNNYPETYSYALTKGINSGLPILYTN
IGAIADRVAAENNTAKYIATDNTDVTQKFDSLLTFIRKHAGLGEKDQTLS
VLEKENLVEIPVFYDSLFFRSALDIINCVQNNHNRFSKHFAEIHRHIQPY
AIFFPQFHPIPENNINFYEGYTDMTNLVAAKLEDPSLLTPLKNLLGFYDL
MQNNEMIPRQIQVAKSYGIAGFAIYYYWFSDNSVSQKNMVFQEVIDRFFE
TVLKDFSVFFVYCNEAWTKNVAFGTHKGGYTIANNYTAENIRMNMLNLVK
YFKHQNYRKIGNRPLFFLHHPHEMTDTEIQLLKAVGDSVMRENGFYGIEL
IVDGREGTYPGFPGYYLHANYKSPKSTVFMKTSTRPQHIDYKAYVRKFLP
KEEKLGDNSSTINSVFTNFDNTVRFYAHDEDRQFEGVGNKAMFMTRTQGR
KVALFKEFLDVQLVKYSQKSDPISQIFLINAWNEWGEQMVLEPSNEEGFA
YLEAFQERLLLAPLSDSVHSSASSRLGGRGIHS*
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Synonyms
Publications