NO03G05110, NO03G05110 (gene) Nannochloropsis oceanica

Overview
NameNO03G05110
Unique NameNO03G05110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1173
Alignment locationchr3:1443755..1444927 +

Link to JBrowse

Properties
Property NameValue
Description4-diphosphocytidyl-2c-methyl-d-erythritol kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1443755..1444927 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016114terpenoid biosynthetic process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00505154-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR036554GHMP_kinase_C_sf
IPR004424IspE
IPR006204GHMP_kinase_N_dom
IPR013750GHMP_kinase_C_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: XP_002178363.1 (4-diphosphocytidyl-2c-methyl-d-erythritol kinase [Phaeodactylum tricornutum CCAP 1055/1] >EEC50028.1 4-diphosphocytidyl-2c-methyl-d-erythritol kinase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 283.9 bits (725), Expect = 7.600e-73
Identity = 161/312 (51.60%), Postives = 203/312 (65.06%), Query Frame = 0 
Query:   79 SRRKEGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLS-KGFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNP 389
            SR K     L LFSP K+NLFLRIIR+REDG+H+LASLFQ + FGDTL   ++ + A  DEF  +   +  D SNLVLRA+ L R KTG+ + F+  L K+ P QAGLGGGS+NAAT ++  N+L+G PAS + ++EWS  LGSDITFFLS+GTAYCTGRGEI+  + P L   T + IVK  IGLSTP+VFKALD + LS  +   +L    T L   + VP S +VNDLE PAF+CIP L+++KE LL   GF  VMMSGSGTSIF +  P     F    F     + V+ + F  RPE     W+  P
Sbjct:   52 SRGKISERTLTLFSPCKINLFLRIIRKREDGFHDLASLFQAIGFGDTLELTSIDSDA--DEFTCNMPGVPVDNSNLVLRAIQLMREKTGEKQSFRANLIKQVPAQAGLGGGSANAATAMWGVNELMGRPASLDQMVEWSGALGSDITFFLSRGTAYCTGRGEIMSSIDPPLPSGTKICIVKIDIGLSTPSVFKALDYDKLSNLNADDVL--LPTFLRGIDQVPDSYFVNDLETPAFKCIPELRSLKEELLGVAGFDHVMMSGSGTSIFCLGEPKDNKDFH-DRFVSRKGLQVFFSEFISRPEG---VWFEKP 355
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: GAX78386.1 (hypothetical protein CEUSTIGMA_g5828.t1 [Chlamydomonas eustigma])

HSP 1 Score: 271.6 bits (693), Expect = 3.900e-69
Identity = 159/341 (46.63%), Postives = 204/341 (59.82%), Query Frame = 0 
Query:   59 PSSTRARLFVVAGTPSSSLESRRKEGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKG-------------FAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWY 386
            PS  R RL   A    +S          +++LFSP+K+NLFLR++RRREDGYH+LASLF  +  GD + F  LP  +T D    S  ++ TD SNLV++AL+LFR KTG   +F + LEKR P  AGLGGGS NAATTL+AAN+L G PAS+E L+EWS E+GSDI+ F SQG AYCTGRGEI+E V P L   T + +VKPP+GLSTP +F++LDL+  S  DP  LL      L     +   L VNDLE PAF  +P L T+KE L S               F+AV M+GSG+++  M     PA   A  +    D+ V       R   +P +WY
Sbjct:   32 PSHLRLRLNAYAAYEDTSCS--------NIQLFSPSKINLFLRVVRRREDGYHDLASLFHVIDLGDNMSFHILPEGSTHDVLTCSDPTIPTDSSNLVIKALNLFRLKTGTQPYFSINLEKRVPHGAGLGGGSGNAATTLWAANELTGRPASNEKLLEWSGEIGSDISVFFSQGAAYCTGRGEIVEEVAPPLPLETPMLLVKPPVGLSTPRIFRSLDLSRRSTVDPLTLLQV----LSSSGTMTQDLAVNDLEQPAFDNLPELLTLKERLKSSSXXXXXXXXXXXXXFSAVFMTGSGSTLVCMGSDETPAFLSAQEY---KDLFVSPARLIVR---EPGSWY 354
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: XP_013894003.1 (diphosphocytidyl-2-C-methyl-D-erythritol kinase [Monoraphidium neglectum] >KIY94983.1 diphosphocytidyl-2-C-methyl-D-erythritol kinase [Monoraphidium neglectum])

HSP 1 Score: 271.2 bits (692), Expect = 5.100e-69
Identity = 144/273 (52.75%), Postives = 188/273 (68.86%), Query Frame = 0 
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSP-STHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKG------FAAVMMSGSGTSIFAMAPPSLPA 354
            +++FSP+KVNLFLRI+RRREDGYH+LASLF  +  GD +  + LP SA  D    S  ++  D+ NLV++AL+L+RRK G + HF+V L+KR P  AGLGGGS NAATTL+AAN+L G PA+D  L+EWS E+GSDI+ F S G AYCTGRGEI+E VP   P  T L +VKPPIGLSTP +F+ALDL   S+EDPR LL     R+     +   L VNDLE PAF  +P L+ ++E L ++G      F++V M+GSG++I      + PA
Sbjct:    1 MQVFSPSKVNLFLRIMRRREDGYHDLASLFHVIDLGDDMELEVLPDSAAVDVLQCSDPTIPCDERNLVIKALNLYRRKAGVSTHFRVRLDKRVPHGAGLGGGSGNAATTLWAANELCGRPATDAQLLEWSGEIGSDISVFFSSGAAYCTGRGEIVEDVPPPLPLDTPLLLVKPPIGLSTPQIFRALDLGRRSEEDPRGLLE----RMAAAGKLSDELTVNDLEQPAFDTLPELRALQERLAAEGDAGGQPFSSVFMTGSGSTIVCAGADAAPA 269
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: XP_005851681.1 (hypothetical protein CHLNCDRAFT_33454 [Chlorella variabilis] >EFN59579.1 hypothetical protein CHLNCDRAFT_33454 [Chlorella variabilis])

HSP 1 Score: 267.7 bits (683), Expect = 5.700e-68
Identity = 152/305 (49.84%), Postives = 197/305 (64.59%), Query Frame = 0 
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTG-RGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSK--GFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNP 389
            L+LFSP+K+N+FLRI+RRREDGYH+LASLF  +  GD + F  LP  A  D+   +   + TD+SNLV++AL+LFR KTG+T+ F+V L KR P  AGLGGGS NAATTL+AAN+L G PAS E+L+EWS E+GSDI+ F S G AYCTG RGEI+E V P L  +T L +VKPP+GLSTP +F+ALDL   S  DPR LL+         E     L VNDLE PAF  +P L  +K  L ++  G+++  M+GSG++I  +    +PA      ++ EM V   A   T      P  WY  P
Sbjct:   44 LKLFSPSKINVFLRIVRRREDGYHDLASLFHVIDLGDDMAFDELPRGAAADQLTCNMEGVPTDESNLVIKALNLFRAKTGRTQRFRVDLRKRVPHGAGLGGGSGNAATTLWAANELCGRPASCEELLEWSGEIGSDISVFFSHGAAYCTGSRGEIVEEVAPPLELATPLLLVKPPVGLSTPEIFRALDLGRRSTADPRDLLARLA-----AEGATQELTVNDLEQPAFDRLPALLELKRRLQAEGGGYSSAFMTGSGSTIVCVGSDEVPAFLSEPQYS-EMFVSP-ARLIT----RQPGQWYAAP 337
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: AJR27236.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Haematococcus lacustris])

HSP 1 Score: 266.9 bits (681), Expect = 9.700e-68
Identity = 143/283 (50.53%), Postives = 190/283 (67.14%), Query Frame = 0 
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKGF----------------AAVMMSGSGTSIFAMAPPSLPA 354
            L LFSP+K+NLFLR++RRREDG+H+LASLF  +  GD + F+ LP  A +D+ + S  S+ +D SNLV++AL LFRRKT   R F V L+K+ P  AGLGGGS NAATTL+AAN+L+G PA+   L++WS E+GSDI+ F S G AYCTGRGE++E V P L  +T L +VKPP+GL+TP +FK+LDL+  S  DP  LL+  T     G P+P +L V+DLE PAF  +P LK +KE L S                   AAV M+GSG++I ++   + PA
Sbjct:   54 LALFSPSKINLFLRVMRRREDGFHDLASLFHVIDLGDDMTFELLPEGADRDQLSCSDPSIPSDDSNLVIKALHLFRRKTQTARFFGVTLQKKVPHGAGLGGGSGNAATTLWAANELMGRPATAAQLLQWSGEIGSDISVFFSLGAAYCTGRGEVVEDVAPPLPLTTPLLLVKPPVGLATPRIFKSLDLSRRSAADPLELLAGMTKAGATGSPLPQALCVHDLEQPAFDNLPELKELKERLASSPVGSSPQDSPGGAEQQRPAAVFMTGSGSTIVSVGCDTPPA 336
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: XP_001694876.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Chlamydomonas reinhardtii] >PNW87452.1 hypothetical protein CHLRE_02g145050v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 265.4 bits (677), Expect = 2.800e-67
Identity = 148/301 (49.17%), Postives = 198/301 (65.78%), Query Frame = 0 
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDIT-FFLSQGTAYCTGRGEILEPVPALSP-STHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKG-FAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWY 386
            ++LFSP+K+NLFLR++RRREDGYH+LASLF  +  GD + F+  P  A QD    S  ++ TD+SNLV++AL+L+RRKT +T +++V L KR P  AGLGGGS NAATTLFAAN+L+G  AS+EDL+EWS E+GSDI+ FF + G AYCTGRGE++E VP   P  T + +VKPP+GL+TP +FK+LDL+  S  DPR LL       G    V  +  VNDLE PAF  +P L  +K+ L+  G F +V M+GSG++I      ++PA        Q  D+ +  T    R    P  WY
Sbjct:   47 VQLFSPSKINLFLRVVRRREDGYHDLASLFHVIDLGDYMEFETTP-HALQDTLECSDPTIPTDESNLVIKALNLYRRKTLQTMYYKVKLHKRVPHGAGLGGGSGNAATTLFAANKLMGGIASNEDLLEWSGEIGSDISVFFSNTGAAYCTGRGEVVEDVPPPVPLDTPMLLVKPPVGLATPKIFKSLDLDRRSSADPRGLLDTIAAAKG----VDQAAAVNDLEQPAFDNLPELAALKQRLIESGQFRSVFMTGSGSTIVCFGSDAVPAFLREE--PQYKDLFISPTRLITR---KPNGWY 337
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: PSC74871.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Micractinium conductrix])

HSP 1 Score: 265.0 bits (676), Expect = 3.700e-67
Identity = 157/347 (45.24%), Postives = 207/347 (59.65%), Query Frame = 0 
Query:   45 TSPSSFAPRTAMSLPSSTRARLFVVAGTPSSSLESRRKEGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSK--GFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNP 389
            T+ S+   +    L ++ R     VA T SS           DL LFSP K+NLFLR++RRREDGYH+LASLF  +  GD + F+AL  +A  D    +   + TD SNLV++A ++FR KTG+ + F V L+KR P  AGLGGGS+NAAT L+AAN+L G PAS+E L+ WS E+GSDI+ F S G AYCTGRGE++E V P L   T L +VKPP+GLSTP +F+ALDLN  S  D R LL+         E     L VNDLE PAF  +P L  +K+ L ++  GF++V M+GSG++I  +     PA    A ++   D+ V       R    P  WY  P
Sbjct:   13 TAGSAQRQQQRQRLAAAPRRSAVRVAATASSGA---------DLHLFSPCKINLFLRVVRRREDGYHDLASLFHVIDLGDDMAFEALAGTAAADALTCNMVGVPTDGSNLVIKAFNMFRSKTGQKQRFAVDLQKRVPHGAGLGGGSANAATALWAANELCGRPASNEQLLAWSGEIGSDISVFFSNGAAYCTGRGEVVEDVAPPLPLDTPLLLVKPPVGLSTPDIFRALDLNRRSTADGRELLARLA-----AEGAVQELAVNDLEQPAFDRLPALLALKQRLQAEGPGFSSVFMTGSGSTIVCVGADEPPAFLQEAQYS---DMFVSPARLITR---QPGEWYAAP 339
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: KIC74793.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Neochlamydia sp. EPS4])

HSP 1 Score: 257.3 bits (656), Expect = 7.700e-65
Identity = 149/302 (49.34%), Postives = 179/302 (59.27%), Query Frame = 0 
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKGFAAVMMSGSGTSIFAM---APPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYP 387
            L L +PAK+NLFLR++ RR DGYH LASL QT+   DTL F    A  +QD       SL  D SNL+  A  LFR+KTG     +V LEK  P+Q+GLGGGSSNAATTL+A NQL G P   E LIEWS E+GSD+ FFLSQGTAYCTGRGE++  +  L P   L+I KP  GLSTP VFK LDL  +S  DP   L +F +            Y NDLE PAF+  P LKT+KE LL  G+  V M+GSGT+ + +   APP +P             V  +  TF  RP      WYP
Sbjct:    5 LTLLAPAKINLFLRVLNRRSDGYHNLASLIQTINLHDTLHF----ALGSQDVLMCEHPSLSKDSSNLITAATHLFRKKTGLNFGLKVVLEKNIPMQSGLGGGSSNAATTLWALNQLHGFPVPLEQLIEWSSEIGSDVPFFLSQGTAYCTGRGEVVRCLDPL-PIQRLWIAKPYEGLSTPLVFKQLDLTKISSYDPEVALQSFFSN--------QPFYFNDLEEPAFELKPYLKTVKEELLRSGYETVSMTGSGTAFYCLGRVAPPIIP------------QVTFYPATFINRP---AERWYP 278
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: WP_044881896.1 (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [Neochlamydia sp. EPS4])

HSP 1 Score: 257.3 bits (656), Expect = 7.700e-65
Identity = 149/302 (49.34%), Postives = 179/302 (59.27%), Query Frame = 0 
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKGFAAVMMSGSGTSIFAM---APPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYP 387
            L L +PAK+NLFLR++ RR DGYH LASL QT+   DTL F    A  +QD       SL  D SNL+  A  LFR+KTG     +V LEK  P+Q+GLGGGSSNAATTL+A NQL G P   E LIEWS E+GSD+ FFLSQGTAYCTGRGE++  +  L P   L+I KP  GLSTP VFK LDL  +S  DP   L +F +            Y NDLE PAF+  P LKT+KE LL  G+  V M+GSGT+ + +   APP +P             V  +  TF  RP      WYP
Sbjct:    2 LTLLAPAKINLFLRVLNRRSDGYHNLASLIQTINLHDTLHF----ALGSQDVLMCEHPSLSKDSSNLITAATHLFRKKTGLNFGLKVVLEKNIPMQSGLGGGSSNAATTLWALNQLHGFPVPLEQLIEWSSEIGSDVPFFLSQGTAYCTGRGEVVRCLDPL-PIQRLWIAKPYEGLSTPLVFKQLDLTKISSYDPEVALQSFFSN--------QPFYFNDLEEPAFELKPYLKTVKEELLRSGYETVSMTGSGTAFYCLGRVAPPIIP------------QVTFYPATFINRP---AERWYP 275
[Close]
BLAST of NO03G05110 vs. NCBI_GenBank
Match: WP_042243032.1 (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [Neochlamydia sp. S13])

HSP 1 Score: 256.9 bits (655), Expect = 1.000e-64
Identity = 149/302 (49.34%), Postives = 179/302 (59.27%), Query Frame = 0 
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKGFAAVMMSGSGTSIFAM---APPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYP 387
            L L +PAK+NLFLR++ RR DGYH LASL QT+   DTL F    A  +QD       SL  D SNL+  A  LFR+KTG     +V LEK  P+Q+GLGGGSSNAATTL+A NQL G P   E LIEWS E+GSD+ FFLSQGTAYCTGRGE++  +  L P   L+I KP  GLSTP VFK LDL  +S  DP   L +F +            Y NDLE PAF+  P LKT+KE LL  G+  V M+GSGT+ + +   APP +P             V  +  TF  RP      WYP
Sbjct:    2 LTLLAPAKINLFLRVLNRRSDGYHNLASLIQTINLHDTLHF----ALGSQDVLMCEHPSLPKDSSNLITAATHLFRKKTGLNFGLKVVLEKNIPMQSGLGGGSSNAATTLWALNQLHGFPVPLEQLIEWSSEIGSDVPFFLSQGTAYCTGRGEVVRCLNPL-PIQRLWIAKPYEGLSTPLVFKQLDLTKISSYDPELALQSFFSN--------QPFYFNDLEEPAFELKPYLKTVKEELLKSGYETVSMTGSGTAFYCLGRVAPPIIP------------QVTFYPATFINRP---AERWYP 275
The following BLAST results are available for this feature:
BLAST of NO03G05110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002178363.17.600e-7351.604-diphosphocytidyl-2c-methyl-d-erythritol kinase [... [more]
GAX78386.13.900e-6946.63hypothetical protein CEUSTIGMA_g5828.t1 [Chlamydom... [more]
XP_013894003.15.100e-6952.75diphosphocytidyl-2-C-methyl-D-erythritol kinase [M... [more]
XP_005851681.15.700e-6849.84hypothetical protein CHLNCDRAFT_33454 [Chlorella v... [more]
AJR27236.19.700e-6850.534-diphosphocytidyl-2-C-methyl-D-erythritol kinase ... [more]
XP_001694876.12.800e-6749.174-diphosphocytidyl-2-C-methyl-D-erythritol kinase ... [more]
PSC74871.13.700e-6745.244-diphosphocytidyl-2-C-methyl-D-erythritol kinase ... [more]
KIC74793.17.700e-6549.344-diphosphocytidyl-2-C-methyl-D-erythritol kinase ... [more]
WP_044881896.17.700e-6549.344-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ... [more]
WP_042243032.11.000e-6449.344-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005369NSK005369Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05110.1NO03G05110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100247g7gene695Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05110.1NO03G05110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05110 ID=NO03G05110|Name=NO03G05110|organism=Nannochloropsis oceanica|type=gene|length=1173bp
ATGGCACAGCAGCAGCGGCGTTGGCAACTACCACCGTCGGCCTGCCTCCT
CGTCGCATGTCTCGTCCTTCTCCTCCCCGATCCTACCACTGCTTTTGCTC
CGCCGCTAAACGGGAACGGGCTTGGACATGCCACCTCCCCCTCCTCCTTT
GCGCCCAGGACCGCCATGTCCCTCCCCTCCTCCACCAGGGCACGCCTCTT
TGTTGTGGCTGGCACTCCATCCTCCTCTCTCGAGTCAAGAAGAAAAGAAG
GCAACTTTGACCTCGAACTCTTTTCGCCCGCCAAGGTCAACCTCTTTCTC
CGCATCATCCGCCGTCGTGAAGACGGCTACCACGAGCTAGCCTCCCTCTT
CCAAACCGTCGCCTTTGGGGACACTTTACTCTTCAAAGCCCTCCCCGCCT
CGGCCACGCAAGATGAATTCGCCTCTTCGTTCACATCCCTCGTCACGGAC
AAGAGTAACTTGGTCTTGCGGGCGCTCGACCTCTTTCGTCGTAAGACAGG
CAAGACTCGCCACTTCCAAGTCTACCTCGAGAAACGCACCCCCGTCCAAG
CCGGTCTCGGTGGTGGGAGCAGCAATGCCGCCACAACGTTATTCGCAGCC
AACCAACTCCTCGGCTGCCCCGCCAGTGATGAAGACCTGATCGAGTGGTC
TAAGGAGCTAGGCTCCGACATAACATTTTTCCTCTCCCAGGGCACAGCAT
ATTGCACTGGTCGCGGCGAAATACTCGAACCCGTCCCCGCCCTATCCCCC
TCCACACACCTCTATATCGTCAAGCCGCCCATCGGTCTTTCTACCCCCGC
AGTTTTCAAAGCGCTTGATTTAAATGCCCTGAGTAAAGAAGATCCTCGGG
CCCTCCTCTCCGCTTTCACCACCCGCCTCGGTAAGGGCGAGCCTGTCCCT
CCCTCTCTATATGTCAACGACCTGGAGCCTCCCGCCTTCCAGTGCATTCC
TGGCCTCAAAACAATCAAAGAGTCTCTGCTCTCGAAAGGGTTCGCCGCCG
TGATGATGTCCGGCAGTGGCACGTCCATCTTCGCCATGGCCCCTCCCTCC
CTCCCTGCCTCCTTTGATGCGGCGGCATTTGCACAAGAGATGGACGTAGA
CGTATGGGCCACCACCTTCACAGGTCGGCCCGAGAACGACCCCAGGGCGT
GGTATCCCAATCCACACGCCTAG
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protein sequence of NO03G05110.1

>NO03G05110.1-protein ID=NO03G05110.1-protein|Name=NO03G05110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bp
MAQQQRRWQLPPSACLLVACLVLLLPDPTTAFAPPLNGNGLGHATSPSSF
APRTAMSLPSSTRARLFVVAGTPSSSLESRRKEGNFDLELFSPAKVNLFL
RIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTD
KSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAA
NQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSP
STHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVP
PSLYVNDLEPPAFQCIPGLKTIKESLLSKGFAAVMMSGSGTSIFAMAPPS
LPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNPHA*
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Synonyms
Publications