NO03G05000, NO03G05000 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G05000
Unique Name	NO03G05000
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4090
Alignment location	chr3:1419484..1423573 -

Link to JBrowse

Properties


Property Name	Value
Description	Cyclin-dependent kinase 10

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:1419484..1423573 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation
GO:0006464	cellular protein modification process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding
GO:0016301	kinase activity
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom
IPR000719	Prot_kinase_dom

Homology

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_009831626.1 (CMGC/CDK protein kinase, partial [Aphanomyces astaci] >ETV78907.1 CMGC/CDK protein kinase, partial [Aphanomyces astaci])

HSP 1 Score: 362.1 bits (928), Expect = 2.600e-96
Identity = 181/341 (53.08%), Postives = 239/341 (70.09%), Query Frame = 0

Query:   57 YGACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIH-------------------RDIKMSNLLYTNTGCLKLADFGLTRLYGAP-PAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRF-PHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRH 377
            +G CR V  ++KLN+IGEG YGTVYR  DK +G++VALKRVILHNEKQDGFP+T++REI++LK +    NCV+L+++ VGRKR GVFLVFEYCEHD++ L+ +++  FT SEVK ++++LLR V +LH   IIH                   RD+K+SN+LY   G +KLADFGL R  G P P  MTPKVVTLWYRAPELLLG+++Y  +ID+WA GCI GEL+   PLL GS +L QL+ I++ LG P ERIWPG+  LPH A  +       Y YN +   F  HLS  G++L+  +L +DP KR+TA+ A RH +F +ERP+PKE  +MPT+ S+H
Sbjct:   22 FGTCRDVDEFEKLNRIGEGTYGTVYRARDKVSGEIVALKRVILHNEKQDGFPITAIREIKLLKRL-HQENCVQLKDVVVGRKRSGVFLVFEYCEHDLSALLSNVHRPFTESEVKRVLMELLRAVEYLHAINIIHRYRQCSIVVVHIVRHVQGFRDLKLSNILYDGFGRIKLADFGLARETGFPSPTSMTPKVVTLWYRAPELLLGAQSYSSSIDIWACGCIFGELILNRPLLNGSTDLEQLQLIYKTLGRPTERIWPGMSSLPH-ADKLDLFDSSLYVYNHIPKLFETHLSAAGLELLQGMLTYDPSKRITASSALRHPYF-DERPFPKEVGMMPTFPSQH 359

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: CEM03300.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 355.1 bits (910), Expect = 3.200e-94
Identity = 167/323 (51.70%), Postives = 237/323 (73.37%), Query Frame = 0

Query:   56 LYGACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDE 379
            ++G CR V  ++KLN++GEG YGTVYR  D+ +G++VALK+V LH+EK +GFP T +REIR+L+ + +HPN V+L E+ VG + + +FLVFEYCEHD+A L+D+M++ F+ +E+K L+LQLLR + HLH+++IIHRD+K+SNLL  N G LKLADFGL R +G+P  P T  VVTLWYRAPELL G+ +Y +AIDMWAVGCI GEL+ ++P+L G NE  Q++ I  LLG+PN +IWP +  LP+     +     +  YN ++ RFP  S   +DL+N +L F+P KR++A +A +H +FT E+P P+E S MPT+    +E
Sbjct:    3 VFGECRSVDDFEKLNRVGEGTYGTVYRAKDRRSGEIVALKKVRLHSEK-EGFPRTGVREIRILRSL-QHPNVVQLREVTVGAQMNSIFLVFEYCEHDLATLLDNMSSPFSHAEIKCLLLQLLRAIQHLHDNFIIHRDVKLSNLLLNNKGTLKLADFGLAREFGSPSEPATQNVVTLWYRAPELLFGAPSYSMAIDMWAVGCIFGELLYHQPILPGKNESQQVQLICNLLGTPNPKIWPEISSLPNYRKFTL----PQNQYNNLSVRFPDESANCLDLLNKMLTFNPDKRISAREALKHPYFT-EKPLPREPSWMPTFKEHRNE 318

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_017671616.1 (PREDICTED: cyclin-dependent kinase 10 [Lepidothrix coronata])

HSP 1 Score: 354.4 bits (908), Expect = 5.400e-94
Identity = 174/324 (53.70%), Postives = 233/324 (71.91%), Query Frame = 0

Query:   58 GACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDEMEA 382
            G CR VK ++KLN+IGEG YG VYR  D  T + VALK+V + NEK DG P++SLREI +L  + RHPN V L+E+ VG   + +FLV  YCE D+A L+++M T F+ ++VK ++LQ+L+G+ +LHE++IIHRD+K+SNLL T+ GC+K+ADFGL R YG PP PMTPKVVTLWYRAPELLLG  T   +IDMWAVGCIL EL+A++PLL G++E+ Q++ I +LLG+PNE IWPG  +LP   +   +LR  K PYN +  RFP LS+ G+ L+N L  +DP KR TA D     +F +E+P P E  LMPT+    ++  A
Sbjct:   47 GRCRSVKEFEKLNRIGEGTYGIVYRARDTLTDETVALKKVRMDNEK-DGMPISSLREITLLLQL-RHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCIILQVLKGLQYLHENYIIHRDLKVSNLLMTDKGCVKIADFGLARTYGMPPKPMTPKVVTLWYRAPELLLGMTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLP--LASQYTLR--KQPYNNLKHRFPWLSEAGLRLLNFLFMYDPKKRATAKDCLESSYF-KEKPLPCEPELMPTFPHHRNKRAA 363

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_004584154.1 (PREDICTED: cyclin-dependent kinase 10 isoform X1 [Ochotona princeps])

HSP 1 Score: 353.6 bits (906), Expect = 9.200e-94
Identity = 179/336 (53.27%), Postives = 239/336 (71.13%), Query Frame = 0

Query:   58 GACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDEMEAREKERARVAEGQ 394
            G CR VK ++KLN+IGEG YG VYR  D  T ++VALK+V +  EK DG P++SLREI +L L  RHPN V L+E+ VG   + +FLV  YCE D+A L+++M+T F+ ++VK ++LQ+LRG+ +LH+++IIHRD+K+SNLL T+ GC+K ADFGL R YG P  PMTPKVVTLWYRAPELLLG+ T   +IDMWAVGCIL EL+A++PLL G++E+ Q++ I +LLG+PNE IWPG  +LP +  G  SLR  K PYN +  +FP LS+ G+ L+N L  +DP KR TA D     +F +E+P P E  LMPT+    +       +RA  AEGQ
Sbjct:   31 GRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEK-DGIPISSLREITLL-LRMRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMSTPFSEAQVKCIVLQVLRGLQYLHKNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLPLV--GQYSLR--KQPYNHLKHKFPWLSEAGLRLLNFLFMYDPRKRATAGDCLESSYF-KEKPLPCEPELMPTFPHHRN-------KRAATAEGQ 352

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_010577860.1 (PREDICTED: cyclin-dependent kinase 10 isoform X1 [Haliaeetus leucocephalus])

HSP 1 Score: 353.6 bits (906), Expect = 9.200e-94
Identity = 173/324 (53.40%), Postives = 234/324 (72.22%), Query Frame = 0

Query:   58 GACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDEMEA 382
            G CR VK ++KLN+IGEG YG VYR  D  T + VALK+V + NEK DG P++SLREI +L  + RHPN V L+E+ VG   + +FLV  YCE D+A L+++M T F+ ++VK ++LQ+L+G+ +LHE++IIHRD+K+SNLL T+ GC+K+ADFGL R YG PP PMTPKVVTLWYRAPELLLG  T   +IDMWAVGCIL EL+A++PLL G++E+ Q++ I +LLG+PNE IWPG  +LP ++    +LR  K PYN +  +FP LS+ G+ L+N L  +DP KR TA D     +F +E+P P E  LMPT+    ++  A
Sbjct:   34 GRCRSVKEFEKLNRIGEGTYGIVYRARDTLTDETVALKKVRMDNEK-DGMPISSLREITLLLQL-RHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCIILQVLKGLQYLHENYIIHRDLKVSNLLMTDKGCVKIADFGLARTYGMPPKPMTPKVVTLWYRAPELLLGMTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLPLVS--QYTLR--KQPYNNLKHKFPWLSEAGLRLLNFLFMYDPKKRATAKDCLESSYF-KEKPLPCEPELMPTFPHHRNKRAA 350

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_011585704.1 (PREDICTED: cyclin-dependent kinase 10 isoform X1 [Aquila chrysaetos canadensis])

HSP 1 Score: 353.6 bits (906), Expect = 9.200e-94
Identity = 173/324 (53.40%), Postives = 234/324 (72.22%), Query Frame = 0

Query:   58 GACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDEMEA 382
            G CR VK ++KLN+IGEG YG VYR  D  T + VALK+V + NEK DG P++SLREI +L  + RHPN V L+E+ VG   + +FLV  YCE D+A L+++M T F+ ++VK ++LQ+L+G+ +LHE++IIHRD+K+SNLL T+ GC+K+ADFGL R YG PP PMTPKVVTLWYRAPELLLG  T   +IDMWAVGCIL EL+A++PLL G++E+ Q++ I +LLG+PNE IWPG  +LP ++    +LR  K PYN +  +FP LS+ G+ L+N L  +DP KR TA D     +F +E+P P E  LMPT+    ++  A
Sbjct:   34 GRCRSVKEFEKLNRIGEGTYGIVYRARDTLTDETVALKKVRMDNEK-DGMPISSLREITLLLQL-RHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCIVLQVLKGLQYLHENYIIHRDLKVSNLLMTDKGCVKIADFGLARTYGMPPKPMTPKVVTLWYRAPELLLGMTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLPLVS--QYTLR--KQPYNNLKHKFPWLSEAGLRLLNFLFMYDPKKRATAKDCLESSYF-KEKPLPCEPELMPTFPHHRNKRAA 350

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_008880109.1 (CMGC/CDK protein kinase [Aphanomyces invadans] >ETV91272.1 CMGC/CDK protein kinase [Aphanomyces invadans])

HSP 1 Score: 353.2 bits (905), Expect = 1.200e-93
Identity = 180/359 (50.14%), Postives = 245/359 (68.25%), Query Frame = 0

Query:   57 YGACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDG---------------VFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAP-PAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRF-PHLSDG------------------GVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDEME 381
            +G CR V  ++KLN+IGEG YGTVYR  DK +G++VALKRVILHNEKQDGFP+T++REI++LK + +  NCV+L+++ VGRKR G               VFLVFEYCEHD++ L+ +++  F+ SEVK ++++LL  V +LH   IIHRD+K+SN+LY   G +KLADFGL R  G P P+ MTPKVVTLWYRAPELLLG+E+Y  +ID+WA GCI GEL+   PL+ GS +L QL+ I++ LG P +RIWPG+  LPH A   +      Y YN +   F  HLS                    G+DL+  +LA+DP KR+TA++A RH +F +ERP+PK+  +MPT+ S+H+ M+
Sbjct:   21 FGTCRDVDEFEKLNRIGEGTYGTVYRARDKVSGEIVALKRVILHNEKQDGFPITAIREIKLLKRLCQE-NCVQLKDVVVGRKRSGYPTSCTCRASHVSSSVFLVFEYCEHDLSALMSNVDCPFSESEVKRVLMELLSAVEYLHSMNIIHRDLKLSNILYDGFGRVKLADFGLARETGFPLPSNMTPKVVTLWYRAPELLLGAESYSPSIDIWACGCIFGELILNRPLMNGSTDLEQLQLIYKTLGRPTDRIWPGMSNLPHAAK--LQFDSSPYLYNHIPKLFETHLSAAVRRVFSTRCSSLRSISLQGLDLLQRMLAYDPAKRITASNALRHPYF-DERPFPKDVGMMPTFPSQHNNMQ 375

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_017942307.1 (PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinase 10 [Manacus vitellinus])

HSP 1 Score: 353.2 bits (905), Expect = 1.200e-93
Identity = 174/324 (53.70%), Postives = 232/324 (71.60%), Query Frame = 0

Query:   58 GACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDEMEA 382
            G CR VK ++KLN+IGEG YG VYR  D  T + VALK+V + NEK DG P++SLREI +L  + RHPN V L+E+ VG   + +FLV  YCE D+A L+++M T F+ ++VK ++LQ+L+G+ +LHE++IIHRD+K+SNLL T+ GC+K+ADFGL R YG PP PMTPKVVTLWYRAPELLLG  T   +IDMWAVGCIL EL+A++PLL G++E+ Q++ I +LLG+PNE IWPG  +LP   +   +LR  K PYN +  RFP LS  G+ L+N L  +DP KR TA D     +F +E+P P E  LMPT+    ++  A
Sbjct:   46 GRCRSVKEFEKLNRIGEGTYGIVYRARDTLTDETVALKKVRMDNEK-DGMPISSLREITLLLQL-RHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCIILQVLKGLQYLHENYIIHRDLKVSNLLMTDKGCVKIADFGLARTYGMPPKPMTPKVVTLWYRAPELLLGMTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLP--LASQYTLR--KQPYNNLKHRFPWLSGAGLRLLNFLFMYDPKKRATAKDCLESSYF-KEKPLPCEPELMPTFPHHRNKRAA 362

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_017572702.1 (PREDICTED: cyclin-dependent kinase 10 isoform X1 [Pygocentrus nattereri])

HSP 1 Score: 352.8 bits (904), Expect = 1.600e-93
Identity = 175/347 (50.43%), Postives = 246/347 (70.89%), Query Frame = 0

Query:   57 YGACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDEMEAREKERARVAEGQKSSTGMLLKS 404
            +G CR VK ++KLN+IGEG YG VYR  D +T ++VALK+V +  EK DG P++SLREI +L  + RHPN V L+E+ VG   + +FLV  YCE D+A L+++M + F+ ++VK ++LQLLRG+ +LH ++I+HRD+K+SNLL T+ GC+K+ADFGL R+YG P  PMTPKVVTLWYRAPELLLG++T   A+DMWAVGCIL EL+A++PLL GS+E+ QL+ I +LLG+PNE IWPG  RLP +  G  SLR  K PYN +  +F  LS+ G+ L+N L  ++P +R +A D+    +F +E+P P E  LMPT+    ++      E    ++ ++S TG  + S
Sbjct:   27 FGNCRNVKEFEKLNRIGEGTYGIVYRARDTTTNEIVALKKVRMDKEK-DGIPISSLREITLLLRL-RHPNIVELKEVVVGSHLESLFLVMSYCEQDLASLLENMQSPFSEAQVKCIVLQLLRGLVYLHHNFILHRDLKVSNLLMTDKGCVKIADFGLARMYGVPQQPMTPKVVTLWYRAPELLLGTKTQTTALDMWAVGCILAELLAHKPLLPGSSEIQQLDLIVQLLGTPNENIWPGFSRLPLV--GQYSLR--KQPYNNLKNKFTWLSEAGLRLLNLLFMYNPQRRASAKDSLESSYF-KEKPLPCEPELMPTFPHHRNKRAGPGAE----SQSKRSKTGCSIAS 362

[Close]

BLAST of NO03G05000 vs. NCBI_GenBank
Match: XP_001377626.1 (PREDICTED: cyclin-dependent kinase 10 isoform X1 [Monodelphis domestica])

HSP 1 Score: 352.4 bits (903), Expect = 2.000e-93
Identity = 177/339 (52.21%), Postives = 238/339 (70.21%), Query Frame = 0

Query:   58 GACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILHNEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCEHDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLYTNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAIDMWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPHIASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDAQRHIFFTEERPYPKEDSLMPTYASRHDEMEAREKERARVAEGQKSS 397
            G CR VK ++KLN+IGEG YG VYR  D  T ++VALK+V +  EK DG P++SLREI +L  + RHPN V L+E+ VG   + +FLV  YCE D+A L+++M T F+ ++VK ++LQ+L+G+ +LH+++IIHRD+K+SNLL T+ GC+K ADFGL R YG P  PMTPKVVTLWYRAPELLLG+ T   +IDMWAVGCIL EL+A++PLL GS+E+ Q++ I +LLG+PNE IWPG  +LP ++    SLR  K PYN +  +FP LS+ G+ L+N L  +DP KR TA D     +F +E+P P E  LMPT+    ++  A        AEGQ  S
Sbjct:   31 GQCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEK-DGIPISSLREITLLLRL-RHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCIILQVLKGLQYLHKNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTATQTTSIDMWAVGCILAELLAHKPLLPGSSEIHQIDLIVQLLGTPNENIWPGFSKLPLVS--QYSLR--KQPYNNLKHKFPWLSEAGLRLLNFLFMYDPKKRATAGDCLESSYF-KEKPLPCEPELMPTFPHHRNKRAATSTTANPGAEGQSQS 362

The following BLAST results are available for this feature:

BLAST of NO03G05000 vs. NCBI_GenBank

BLAST of NO03G05000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_009831626.1	2.600e-96	53.08	CMGC/CDK protein kinase, partial [Aphanomyces asta...	[more]
CEM03300.1	3.200e-94	51.70	unnamed protein product [Vitrella brassicaformis C...	[more]
XP_017671616.1	5.400e-94	53.70	PREDICTED: cyclin-dependent kinase 10 [Lepidothrix...	[more]
XP_004584154.1	9.200e-94	53.27	PREDICTED: cyclin-dependent kinase 10 isoform X1 [...	[more]
XP_010577860.1	9.200e-94	53.40	PREDICTED: cyclin-dependent kinase 10 isoform X1 [...	[more]
XP_011585704.1	9.200e-94	53.40	PREDICTED: cyclin-dependent kinase 10 isoform X1 [...	[more]
XP_008880109.1	1.200e-93	50.14	CMGC/CDK protein kinase [Aphanomyces invadans] >ET...	[more]
XP_017942307.1	1.200e-93	53.70	PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent k...	[more]
XP_017572702.1	1.600e-93	50.43	PREDICTED: cyclin-dependent kinase 10 isoform X1 [...	[more]
XP_001377626.1	2.000e-93	52.21	PREDICTED: cyclin-dependent kinase 10 isoform X1 [...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL069	nonsL069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR000	ncniR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR054	ngnoR054	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005382	NSK005382	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO03G05000.1	NO03G05000.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|627005	gene_1707	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100351g6	gene706	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO03G05000.1	NO03G05000.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO03G05000 ID=NO03G05000|Name=NO03G05000|organism=Nannochloropsis oceanica|type=gene|length=4090bp
CCCTCCCCTCCCTCGCCAAATCTGCGCCACTACCGCCCCCCCCGCCAAGG
CCACCCCTCCGTATACTAACCCCTGCCGTCTATCCCTCAATTGCCTTCTC
AAGCTGGCTGTTACTCCACTGACGATCGCATCTGCGCTTCCTCGCACCGC
TTGCTCCCAGGCGCGGCGGAGGCGCCGTTGAAGAACGTAGGCAGCGACAT
CTTCAACTTCCCCGGGAGCGGGCCAGCTTTCTGACACTGGCCGAGAAAGA
GGAGGAGGAGGAGGAGATTGGGTGGTAGTGTCGGTGGTGAGGGTGCGGGT
GTTCCTGCTGCTGCTGTTTTGCTGGTGGTGGTGGTGGTAGGAGGTAGAGG
AGAGGGGAAAAGCCGGCCGGAGGCCGTTGCCTTGCTGTGGTGTTCGCCGC
TGCGGATTTCTGCCCATAGCCATGCCCACCTGTCGCGGCAACTGATGCGT
CATCCGATTACTACTCCTCCGCCCGCTCTCCCCCCCGTCCTCCTGCTCGT
CCAGGTACTCGTCCTCTTCGTCTGTCTCAGATGCCGTCATCACTTCCTCC
GCTTCCTCCTCTCCCTCCCTCCCTTCCTCCCGCTGTCGTCGCTCGTCCAT
TTCTTGTAGTCGTCGACGGGTCATCTCCGCGGCTTGCATCTCACTGATCT
CCTCAATGCGATGTCGCCATCCTTCCCTCCCCTCTCCTCCACCTCCAGCA
GAAGCAGCAGTCGCGATACATGCCGCAGCTGGTGTTGCCGGTACACATGC
GTTCCCTCCTGACATGAGCATGCCACCGGCATCGCTGCAACCACCGCGTG
GCAGGAGCATGCTTTGCACGGAAGCCGGCAAGGTGTTCAATAAACCAGGC
GCCGTCAAAGCTCGTTGCTCCGGTGGAGGAAGACTGCTGATGAGAAAGGA
GCGTTCCTCCTCATTCAATCCCATCCCGATGACGGCATATGGCTTCAGAC
GATCAGCCATGGATGTGTCGAGGAGCCAGTCCAGCAGCGAGGTCTGCAGG
AGGAGTTCTTGGGTCGAGGGGGGCAGGTAGGTGAGCAGGCCTCGTTCCCG
CACACGTTGGTAAGTCATCGAGGCCATGGTCGTCAGAGACGCCACCCACA
GGACGAGGTAGAATATGGCCTGCGACGATAAGACAGAGCGTACCAAGCCC
ACGAACGCCACGAAGAGTGCGAGACGCAGTGTTCGAGTCACGGCCCAATA
CCTTAGTTCCTCCCCTGGCACCCACGGGCGCTCTTCCCCTTGCCCATCCT
CCTCTTCGTCGTTCCCACCCCAATTGTTTCCACTGCCTTGCCCGTCGCCC
TGTCGGCGTGTCATAAGGCCTCTGCCGTTGTTGGTGGTGCTGCTTCTAAC
TGTAGTTGTTGTGTCGGACATCTGGCCTCCTCCGTTTTGCTGTTGCTGCT
GCTGCTGCCCATCTCCCCCCGCTGCCCCGACCTCTGCTGCTGCTGTTGAT
GAAGCTCGCGGCCCACCGTCTCCCGAATCGTCTAGGAGCCGCTTGCATTG
TGACATCCTGTGTGCTGGAGGGGTGAGAGGGGTCCAATGAGCGTACGTGG
GCATATAAACAAGGAATTGAATTTGTCCCCATATAACAGCTGACTGCTGT
CATCATCACGAGGACGTTGGCTACTTCGCGTGCATGAACATTTCCCATTC
ACGCCAAGCACATAAACATCGGAAAAACAGTGGAACGTTCGTCATGATCA
TATCCAAGCCCTAGGACGACGACACCGGAGATCTGCCAAAGTCAAATTCA
AGACAGGCGAGCAAGCATGAAGCCTCCTGCGCCTCCCTCCTGCCCTCTAG
TTCACTCCAACAATAATGCCACGCCCTCCGCCAGCAGCTACAACCCCACA
GACAACAACGGCAACAATGACAACAACAACAACAACAATGACAAAATCAA
CAATGCCAACAATGAGATCAACGAGGCGGACCTGTACGGGGCATGCCGCC
CGGTGAAAAGCTACCAAAAGCTAAATCAAATCGGGGAAGGAGCGTATGGC
ACCGTGTACCGCGGCGTAGACAAGTCCACCGGGAAAATGGTGGCTCTGAA
ACGCGTGATTTTGCACAACGAGAAGCAGGATGGCTTTCCCCTGACGTCTT
TGAGGGAAATTCGCATGCTCAAGCTGATTGGTCGACACCCGAATTGTGTG
CGGTTGGAAGAGATTGCGGTGGGAAGGAAGCGGGATGGTGTTTTCTTGGT
ATTTGAGTACTGCGAGgtaagccaatttgattgcaaggatatcgacaatc
tctattgaagattttccgcgtctagatgttatgactgtccccgtcccccg
tgtcctgccactgctctgatatcgacacgaccccaaatgctctcttgaac
tcacacattcacctttttcctttccctcctctctttctttcaccttactc
tatagCACGATATGGCCCACCTCATCGACCACATGAACACGCGTTTCACT
TCGTCCGAGGTGAAGAACCTGATGCTACAGCTGCTAAGGGGTGTGGCACA
CTTGCACGAGCACTGGATCATCCACCGGGACATAAAGATGAGCAACCTCC
TCTATACCAACACTGgtaagcacggaggaaaagaaggagggcaacaacga
tgggaaagatgtccgcacctcatataccaatatgcatattgtcttggcat
gtcttcatcctctcccttaacccactctcctcccctccttcgctccctcc
cttccctccctccccaccagGCTGCCTGAAGCTCGCTGACTTCGGCCTCA
CCCGTCTTTACGGCGCTCCTCCCGCACCCATGACCCCTAAAGTTGTCACT
CTTTGGTACCGAGCCCCGGAGTTGTTGTTGGGGTCGGAGACGTATGACAT
TGCGATTGACATGTGGGCGGTAGGATGTATTTTGGGGGAGTTGATGGCGT
ATGAACCCTTGTTGGCAGGTTCAAATGAATTGATGCAGTTGGAGAAGATT
TTTGAGCTATTGGGGAGTCCAAATGAGAGAATATGGCCGGGGGTAGAGAG
GCTACCGCACATAGCTTCGGGCATGGTGTCGTTGCGGGGGGACAAGTACC
CGTACAACACGGTGGCAACGCGCTTTCCTCATTTGAGTGACGGAGGAGTG
GATTTGATGAATTCCCTGTTGGCGTTTGACCCCATGAAAAGGTTGACCGC
AACAGATGCGCAGCGGCACATCTTCTTCACGGAGGAGCGGCCTTATCCGA
AGGAGGATTCGCTTATGCCTACTTATGCGTCGAGGCACGATGAGATGGAG
GCGAGGGAGAAGGAAAGGGCACGAGTGGCCGAGGGGCAGAAATCCTCGAC
CGGGATGTTGTTGAAAAGCGACTTTTTTGCATCGGCGCCATCCTCGGCGA
GGGGACAAGGAGGAGGGGATGGAGGAGGAGGGGGGGCAAGAAGAAGTATC
GCGGTTGGTGGAAGGGGAGACGGGTGGCCAAGAGGGGGGAGGGGACGGAT
TGTGCCGGTGCTGAAGAAGGCCAAGCCTTAGGGAATTCAAATGTGGGTCA
GAGAATTGTGAATGAACGTGAAGGACAGCCAGCACCGGCATCAGCACCAG
ATACGGCGGTGGCCATCGCTCGAAGCAGCAGTAGCCGCCGCTACCACGAG
CCAGGCAGCTGCACGAGCTACAGAAGCTACAGCAGCACCAGCCTCACCAG
CATCAGCATCCTTCTCTCAGCGGACAACGGAGCGTCATTAAATGAGCTTT
TGCTTTGCAACCAATCCCTTATGCGGCGTTCTGGTTTACATAGATCTATG
AAGTCTGAGCTGGCAATGTCGTTCGCGGCAGTGGTTTGAGTTCTAGAAGC
ACGAAGACGTAGCACTAGCAGGCAGGAAGGGTAGAGACTCGCTCATTTTA
TTACTTGCCTGTTGCAAGTTCCACGAATAGCAGCCCTAGCCCTAGCTACA
GTTGAAAAACTGCGGTCTTGTCAAAAGAGCAGTAAAACCAGCAGCAGCAG
AAATAAGGTGAGGAGAAGTAGTAGCCGCAGCAGCCGCAATAGCCGCAGCA
GGAGATGCACAAATTCAAGAAATGGCAAGAATAGGAAGAGCAGGACTATG
TTAATGGAAAAAGTAATTTAGAGAACGAAAAACGCACCAT

protein sequence of NO03G05000.1

>NO03G05000.1-protein ID=NO03G05000.1-protein|Name=NO03G05000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=457bp
MKPPAPPSCPLVHSNNNATPSASSYNPTDNNGNNDNNNNNNDKINNANNE
INEADLYGACRPVKSYQKLNQIGEGAYGTVYRGVDKSTGKMVALKRVILH
NEKQDGFPLTSLREIRMLKLIGRHPNCVRLEEIAVGRKRDGVFLVFEYCE
HDMAHLIDHMNTRFTSSEVKNLMLQLLRGVAHLHEHWIIHRDIKMSNLLY
TNTGCLKLADFGLTRLYGAPPAPMTPKVVTLWYRAPELLLGSETYDIAID
MWAVGCILGELMAYEPLLAGSNELMQLEKIFELLGSPNERIWPGVERLPH
IASGMVSLRGDKYPYNTVATRFPHLSDGGVDLMNSLLAFDPMKRLTATDA
QRHIFFTEERPYPKEDSLMPTYASRHDEMEAREKERARVAEGQKSSTGML
LKSDFFASAPSSARGQGGGDGGGGGARRSIAVGGRGDGWPRGGRGRIVPV
LKKAKP*

Synonyms

Publications