NO03G04520, NO03G04520 (gene) Nannochloropsis oceanica

Overview
NameNO03G04520
Unique NameNO03G04520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3084
Alignment locationchr3:1296937..1300020 +

Link to JBrowse

Properties
Property NameValue
DescriptionNuclear control of ATP synthase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1296937..1300020 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013946NCA2
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G04520 vs. NCBI_GenBank
Match: EWM29912.1 (Nuclear control of ATP synthase 2 [Nannochloropsis gaditana])

HSP 1 Score: 885.9 bits (2288), Expect = 8.300e-254
Identity = 487/736 (66.17%), Postives = 547/736 (74.32%), Query Frame = 0
Query:    9 ALSRLGSVTDLVSLRNFQGHSLIDHRHKERFRHKRILDALNVQTRQGIPIQRSLAKLQAEAEKILHGRIRLSDDETQIFVASLAECQLRICLESELDLSGSLYWDCLFWQDRIASPLAAWLEAGPFTWFQDEDEALTPEDKLESSQRLMGQINVGTGLIQQHLTRKIVNTDVMYLAVWSQEALTLIDDILDNDFETPGQLNLERSGRLLLPEDAISN-STSASDLRECMARLATLRARIASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRRETIMLLRSFLLSMERMLNLRNVGASENEIKYLKLDRTPVLKPIHAPV-GAAGQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDGLSLDEIRQMSADSSVNGRGESSSVYEDLHKERADGIQGQRNGGRGIEEEKDDGR-EPPRIQTACLQGSPISSAESTWGDLEGGGSNNNYNTDLRVVFLRPEDLGVLLLLVNQFAGVIQRTSSRFLTDLELRNLQEDLNEIAGNCGPVTVAQQLCVVQRMHRSYRFLQLPAGSLFSGL 742
            ALSRL SVTDLV+LR    HSL DHRHKERFRHKRILDAL+ QTR GIPIQRSLAKL+AEA KILH RI L+DDETQIF+A   ECQLRICLESELDLSG+LYWDCLFWQDRI+ PL AWLEAGPF+WFQD DE +TPEDKLE  QR+M QINVG GL+QQHL+RK+VNTDV YL  W+ EAL LIDDIL +DFE+PG+L +  S R LLP  A     +S   L+ECMARL TLR RI++RAA F    + L APSF RRRWL+IL+A PFL  S +W WGKRGDIP WVAQAV+STREFF EHVSEPSRAI KELIWNEHESITDVAALEDAK+SL RMLADFV+DTNPKL E+ER+ LA +MDMSVVSSRYEQ+LPQAM+HI++GEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLA+YGTYQ +KA  YKLT++KGR ETIMLLRSFLLSMERMLNLRNVGASENEIKYLKL+R          + G+ GQS                                             +   + L+ IRQ S +S  +G   +SS Y        D +      G+G  E  D  R   P ++    +  P  S  ST  DLE G     +N + RVVFL+PEDLGVLLLL++QFA V+QRTS RFLTDLELRNLQEDLNEI GNCGPVTVAQQLCVVQRMHRSYRFLQ PAGSLFS L
Sbjct:    8 ALSRLSSVTDLVNLRTIPTHSLPDHRHKERFRHKRILDALSTQTRHGIPIQRSLAKLEAEANKILHDRIHLTDDETQIFLAFFVECQLRICLESELDLSGTLYWDCLFWQDRISRPLEAWLEAGPFSWFQDPDEVMTPEDKLEYLQRVMVQINVGAGLVQQHLSRKLVNTDVQYLGEWTAEALALIDDILSDDFESPGRLEMRTSARQLLPASAQPGFVSSVVALKECMARLTTLRTRISTRAACFHKATSHLRAPSFLRRRWLHILVAAPFLFFSLRWVWGKRGDIPRWVAQAVRSTREFFLEHVSEPSRAIAKELIWNEHESITDVAALEDAKESLARMLADFVRDTNPKLPEEERRALAANMDMSVVSSRYEQSLPQAMRHIINGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLAMYGTYQGTKAVTYKLTRRKGRGETIMLLRSFLLSMERMLNLRNVGASENEIKYLKLNRPAAFHANSFSLGGSVGQS-----------------------DAQHQQAPSVFSPTPVEGEEARKGSRMPLESIRQRSTESIDDG---NSSDY--------DHVAEDETPGKGEGEAGDSHRGSLPMLEERREEEVPFVSRASTLDDLERG----TFNAEPRVVFLKPEDLGVLLLLIHQFAQVVQRTSRRFLTDLELRNLQEDLNEIIGNCGPVTVAQQLCVVQRMHRSYRFLQAPAGSLFSSL 705          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: GAY04423.1 (Hypothetical protein PINS_012232 [Pythium insidiosum])

HSP 1 Score: 195.7 bits (496), Expect = 5.200e-46
Identity = 131/401 (32.67%), Postives = 212/401 (52.87%), Query Frame = 0
Query:  116 FWQDRIASPLAAWLEAGPFTWFQDEDEALTPEDKLESSQRLMGQINVGTGLIQQHLTRKIVNTDVMYLAVWSQEALTLIDDILDNDFETPG--------------------QLNLERSGRLLLPEDAISNSTSASDLRECMARLATLRARI----ASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRR------ETIMLLRSFLLSMERMLNLRNVG 487
            FW+ +   P+ A ++  P  W + E E +T ++++ S +  +  +    G ++   TR +  TD    A+ S  A+ L    L++ + + G                     + LER     +  D  +   +A+ +R+ +  L T  AR+       A  F   +AP   PS  R+RWL++ +    +     W    + +    V+ A  +  +F TEH+ EP +AI  E++ N+   I D AAL D K+SL RMLADFV+DTNP  + +E +++   MDMSVVS +YE+ +  A+++++SG+IVRMLLIQVQFIKKEL+VAM  ID++M++N LN ++MA  P  L   G YQ +K   +++ ++   R      E    LR+ L  +ER+LN +N G
Sbjct:  328 FWKAQRRRPVRAAIQQHPLEWLKPESERITLDERIYSLESTLSAVLEKLGHLKDAATRLLHATDSSVDALPSLLAVALRQ--LEHAYSSAGVVPPRKGHGAFKTLAPLDFASIQLER----CVTTDLTTIEVTAASVRQSLVLLHTNVARLDVAREKLATSFHDALAPCRVPSKLRQRWLHLAVTVACVAGGAAWIARNQREFQDAVSAARVAFEDFLTEHMIEPMQAIVAEVLLNQKPEIQDAAALRDTKESLRRMLADFVRDTNPTTNSEELQRVVREMDMSVVSLQYEKQIGNAVRNLMSGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQMMATVPTFLVFGGAYQLAKELFFQVYRRTSERLFYDPAEIAGFLRNILRDIERLLNKQNRG 722          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: XP_024575236.1 (Nuclear control of ATP synthase 2 [Plasmopara halstedii] >CEG38867.1 Nuclear control of ATP synthase 2 [Plasmopara halstedii])

HSP 1 Score: 191.0 bits (484), Expect = 1.300e-44
Identity = 130/400 (32.50%), Postives = 204/400 (51.00%), Query Frame = 0
Query:  115 LFWQDRIASPLAAWLEAGPFTWFQDEDEALTPEDKLESSQRLMGQINVGTGLIQQHLTRKIVNT--DVMYLAVWSQEALTLIDDILDNDFETP---GQLNLERSGRLLLP------------EDAISNSTSASDLRECMARLATLRARIASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRR------ETIMLLRSFLLSMERMLNLRNVGASENE 492
            +FW+      L  +L+ GP  W     + +T E+K+ S +  +       G++++ +T K  +T  D   L +  +E + L++ + + +   P   G  + +    LL                 IS     S L+     L   +         FQ  +AP   PS  R+RWL +      L     W    + +    +     + ++F  EH+ EP +AIF+E++ N+   I D  AL D K+SL RML+DFVKDTNPK+S +E +++   MDMSVVS +YE+ L  A+K++++G+IVRMLLIQVQFIKKEL+VAM  ID++M++N LN ++MA  P  L   G Y+    A + + K+   R      E    LR+ L  +ER+LN +N G   +E
Sbjct:  129 VFWKQLQKRRLREFLQRGPLQWISSRTQQITVEEKIRSLRETLEAHLKKIGMLKE-MTTKCASTFSDYEQLEMRMKEGMALVEFVYNTNGICPPRKGHGSFKSQDPLLFTIFHFDENIFDKNRAIISTQDVVSSLQRVEKNLKIFQTAQVQYLRCFQLAMAPCRPPSKIRQRWLQVSAVAICLTAGGFWVLTNQKEFHAGIVATRAALQDFLREHMLEPLQAIFEEVVLNQKPQIQDAMALLDTKESLRRMLSDFVKDTNPKVSREEMQRIMTEMDMSVVSLQYEKQLASAVKNLMTGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNMQIMATIPTFLVFGGLYKLVTTAFHMIYKRLSDRLFYDSNEIAGFLRNNLRDIERLLNKQNRGPGTSE 527          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: XP_009522594.1 (hypothetical protein PHYSODRAFT_491076 [Phytophthora sojae] >EGZ19877.1 hypothetical protein PHYSODRAFT_491076 [Phytophthora sojae])

HSP 1 Score: 189.9 bits (481), Expect = 2.900e-44
Identity = 130/400 (32.50%), Postives = 203/400 (50.75%), Query Frame = 0
Query:  116 FWQDRIASPLAAWLEAGPFTWFQDEDEALTPEDKLESSQRLMGQINVGTGLIQQHLTRKIVNT--DVMYLAVWSQEALTLIDDILDNDFETP---GQLNLERSGRLLLP-------------EDAISNSTSASDLRECMARLATLRARIASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRR------ETIMLLRSFLLSMERMLNLRNVGASENE 492
            FW+      +   L+ GP  W     + +T  +++ S +  +       G++++ LT +   T  D   LA   +E +TL++ +   +   P   GQ   +    L+                  IS+    S LR     L+  R      +  FQ  +AP   PS  R+RWL +      L     W    + +    +A    + +EF  EH+ EP +AIF E++ N+   I D  AL D KQSL RML+DFVKDTNP +S  E  ++ + MDMSVVS +YE+ L  A++++++G+IVRMLLIQVQFIKKEL+VAM  ID++M++N LN +++A  P  L   G Y+   +A + + K+   R      E    LR+ L  +ER+LN +N G+  ++
Sbjct:  136 FWKQLKKRTVREILQRGPMQWLMTRAQRITVGERIRSLEETLEAHLRKIGMLKE-LTTRCSGTFEDYDQLAERMKEGMTLLELVYSTNGICPPRKGQGAFKSQDPLIFTAFYFDENIFEKGCNGVISSEDVVSSLRRVETNLSVFRTAQTQFSRCFQAALAPCRPPSKIRQRWLQVTTVAICLTAGGFWVVNNQDEFRAGIAAMRAALQEFLNEHMVEPLQAIFGEVVLNQKPEIQDAMALLDTKQSLRRMLSDFVKDTNPNVSSAEMNRIMDEMDMSVVSLQYEKQLASAVRNLMTGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQILATIPTFLVFGGLYKLVTSAFHMIYKRMSDRLYYDSSEIAGFLRNNLRDIERLLNKQNRGSGASD 534          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: POM78455.1 (NCA2 domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 186.4 bits (472), Expect = 3.200e-43
Identity = 128/399 (32.08%), Postives = 203/399 (50.88%), Query Frame = 0
Query:  116 FWQDRIASPLAAWLEAGPFTWFQDEDEALTPEDKLESSQRLMGQINVGTGLIQQHLTR-KIVNTDVMYLAVWSQEALTLIDDILDNDFETP---GQLNLERSGRLLLP---------EDAISNSTSASD----LRECMARLATLRARIASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRR------ETIMLLRSFLLSMERMLNLRNVGASENE 492
            FW+      +   ++ GP  W     + +T  +++ S +  +       G++++  TR      D   L    +E + L++ +   +   P   GQ   +    L+           E   +  TS+ D    LR     L+  R      +  F T +AP   PS  R+RWL +      +     W    + +    +     + ++F  EH+ EP +AIF+E++ N+   I D  AL D K SL RML+DFVKDTNPK+S  E K++ + MDMSVVS +YE+ L  A+K++++G+IVRMLLIQVQFIKKEL+VAM  ID++M++N LN ++MA  P  L   G Y+   +A + + K+   R      E    LR+ L  +ER+LN +N G+S ++
Sbjct:  132 FWKQLKKRTVREIIQRGPMQWLLTRAQRITVGERIRSLEETLEAHLRKIGMLKELTTRCSSTFADYEQLTERMKEGMALLELVYSTNGICPPRKGQGAFKSQDPLIFTAVYFDENIFEKECTGVTSSEDVVSSLRRVERNLSVFRTAQTQFSRCFNTALAPCRPPSKVRQRWLQVATVAICITAGGFWVVNNQKEFQAGIVAMRVALQDFLNEHMLEPLQAIFEEVVLNQKPEIQDAMALLDTKDSLRRMLSDFVKDTNPKVSSTEMKRIMDEMDMSVVSLQYEKQLGSAVKNLMTGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNMQIMATVPTFLVFGGLYKLVTSAFHMIYKRMSDRLFYDSTEIAGFLRNNLRDIERLLNKQNRGSSVSD 530          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: ETI52340.1 (hypothetical protein F443_04481 [Phytophthora parasitica P1569] >ETK92230.1 hypothetical protein L915_04353 [Phytophthora parasitica] >ETL45611.1 hypothetical protein L916_04319 [Phytophthora parasitica] >ETO81115.1 hypothetical protein F444_04509 [Phytophthora parasitica P1976] >ETP22161.1 hypothetical protein F441_04453 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 185.7 bits (470), Expect = 5.400e-43
Identity = 132/400 (33.00%), Postives = 203/400 (50.75%), Query Frame = 0
Query:  116 FWQDRIASPLAAWLEAGPFTWFQDEDEALTPEDKLESSQRLMGQINVGTGLIQQHLTRKIVNTDVMY--LAVWSQEALTLIDDILDNDFETP---GQLNLERSGRLLLP---------EDAISNSTSASDLRECMAR----LATLRARIASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRR------ETIMLLRSFLLSMERMLNLRNVGASENE 492
            FW+      +   L  GP  W     + +T  +++ S Q  +       G++++ LT +  +T   Y  LA   +E + L++ +   +   P   G    +    +L           E      TS+ D+   M R    L   R      +  FQ  +AP   PS  R+RWL +      L     W    + +    +A    + +EF  EH+ EP +AIF+E++ N+   I D  AL D K SL RML+DFVKDTNPK+S  E  ++ + MDMSVVS +YE+ L  A+K++++G+IVRMLLIQVQFIKKEL+VAM  ID++M++N LN ++MA  P  L   G Y+   +A + + K+   R      E    LR+ L  +ER+LN +N G+  ++
Sbjct:  132 FWKQMKKRTVREILLRGPMQWILSRAQRITAGERIRSLQETLEAHLRKIGMLKE-LTTRCSSTFANYEQLAGRMKEGMALLELVYSTNGLCPPRKGHGAFKSQDPILFTAFYFDDNIFEKGCDGITSSDDVVNSMRRVENNLIVFRTAQTQFSRCFQAAMAPCRPPSKIRQRWLQVTTVAICLTAGGFWVVNNQEEFRAGIAAMHAALQEFLNEHMLEPLQAIFEEVVLNQKPEIQDAKALLDTKDSLRRMLSDFVKDTNPKVSSAEMNRIMDEMDMSVVSLQYEKQLAAAVKNLMTGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNMQMMATVPTFLVFGGLYKLVTSAFHMIYKRMSDRLFYDSHEIAGFLRNNLRDIERLLNKQNRGSGVSD 530          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: XP_002902264.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56936.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 181.4 bits (459), Expect = 1.000e-41
Identity = 108/268 (40.30%), Postives = 157/268 (58.58%), Query Frame = 0
Query:  230 SDLRECMARLATLRARIASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRR------ETIMLLRSFLLSMERMLNLRNVGASENE 492
            S LR     +A  R+     +  FQ  +AP   PS  R+RWL +      L     W    +      +     + +EFF EH+ EP +AIF+E++ N+   I D  AL D K+SL RML+DFVKDTNPK+   E K++ + MDMSVVS +YE+ L  A+K++++G+IVRMLLIQVQFIKKEL+VAM  ID++M++N LN ++MA  P  L   G Y+   +A + + K+   R      E    LR+ L  +ER+LN +N G+  ++
Sbjct:  266 SSLRRVERNVAAFRSAQTQFSRCFQAAMAPCRPPSKIRQRWLQVAAVAICLTAGGFWVVNNQKGFQAGIVAMRAALQEFFNEHMIEPLQAIFEEVVLNQKPEIQDAMALLDTKESLRRMLSDFVKDTNPKVPSAEMKRIMDEMDMSVVSLQYEKQLASAVKNLMTGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNMQMMATVPTFLVFGGLYKLVTSAFHMVYKRMSDRLFYDSHEIAGFLRNNLRDIERLLNKQNRGSGVSD 533          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: CBJ26254.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 180.6 bits (457), Expect = 1.700e-41
Identity = 104/234 (44.44%), Postives = 148/234 (63.25%), Query Frame = 0
Query:  252 RFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWV-AQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRRETIMLLRSFLLSMERMLNLRN 485
            R   L+    APS  RR W++I +ATP  +V+  + +  R     W+  + +Q  R+F  EH+SEP   I+ EL+ N+  ++TD  AL D+  SL RML  F+KDT P LSE E KK+A + DMSVVS  YE+++  A K+ V+G+IVRM+LIQVQFIK+ELL+A   I  +   N LN R+MA  PA L  +G+Y+A + A Y L  +K R  T   + + +L+MER+LNLR+
Sbjct:  404 RIPLLLGRFAAPSRIRRNWMFIAVATPAALVAMFYMYRNR-----WLHDEGLQRWRQFVREHISEPFWGIYNELVHNQPLTLTDANALADSSFSLQRMLEAFIKDTKPNLSEGEVKKMARTGDMSVVSREYERSIINAWKNFVAGDIVRMMLIQVQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSYRAVRPAYYWLKSEKSRESTFTAMCTIVLAMERLLNLRH 632          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: ETI52341.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK92231.1 hypothetical protein, variant [Phytophthora parasitica] >ETL45612.1 hypothetical protein, variant [Phytophthora parasitica] >ETO81116.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP22162.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 178.3 bits (451), Expect = 8.600e-41
Identity = 111/282 (39.36%), Postives = 160/282 (56.74%), Query Frame = 0
Query:  220 EDAISNSTSASDLRECMAR----LATLRARIASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKKGRR------ETIMLLRSFLLSMERMLNLRNVGASENE 492
            E      TS+ D+   M R    L   R      +  FQ  +AP   PS  R+RWL +      L     W    + +    +A    + +EF  EH+ EP +AIF+E++ N+   I D  AL D K SL RML+DFVKDTNPK+S  E  ++ + MDMSVVS +YE+ L  A+K++++G+IVRMLLIQVQFIKKEL+VAM  ID++M++N LN ++MA  P  L   G Y+   +A + + K+   R      E    LR+ L  +ER+LN +N G+  ++
Sbjct:   74 EKGCDGITSSDDVVNSMRRVENNLIVFRTAQTQFSRCFQAAMAPCRPPSKIRQRWLQVTTVAICLTAGGFWVVNNQEEFRAGIAAMHAALQEFLNEHMLEPLQAIFEEVVLNQKPEIQDAKALLDTKDSLRRMLSDFVKDTNPKVSSAEMNRIMDEMDMSVVSLQYEKQLAAAVKNLMTGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNMQMMATVPTFLVFGGLYKLVTSAFHMIYKRMSDRLFYDSHEIAGFLRNNLRDIERLLNKQNRGSGVSD 355          
BLAST of NO03G04520 vs. NCBI_GenBank
Match: CCI48294.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 178.3 bits (451), Expect = 8.600e-41
Identity = 119/298 (39.93%), Postives = 171/298 (57.38%), Query Frame = 0
Query:  198 LDNDFETPGQLNLERSGRLLLPEDAISNSTSASDLRECMARLATLRARIASRAARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQAV-QSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLADFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASKAAIYKLTKKK------GRRETIMLLRSFLLSMERMLNLRNVGAS 489
            LD+DF   G   LE   +  L    +S       +R+   RL++L          FQ  + P   PS  +RRW+ + IA   + V+  W    R    L +A+ + ++ ++FF EH+ EP  AI  E+++N    I D AAL DAK SL RML DF  DTNP +  +E ++  ESMDMS+VS  YE+ L  A++ +++G+IVRMLLIQ+QFIKKEL+VAM  IDD+M++N LN +L+A  P +LA  G Y  +K   ++L +K         RE    LR FL  +ER+LN +N G+S
Sbjct:  224 LDSDFVCSG---LEFVSKSNLQRSLLSLDAHICQMRDVRVRLSSL----------FQCALKPCRPPSTLQRRWIPLTIAVVSVGVAGVWLTRNRVRF-LSIARTIREALQQFFIEHMIEPIDAILGEILFNRKNDIQDAAALLDAKASLQRMLHDFACDTNPNMPPQELERKVESMDMSLVSFVYEKQLSTAVRSLMTGDIVRMLLIQIQFIKKELMVAMGAIDDLMHANQLNLQLLATIPTILAGAGIYGLTKMLFFQLYRKTTEHLSYDSREVASHLRRFLRDIERLLNKQNRGSS 507          
The following BLAST results are available for this feature:
BLAST of NO03G04520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29912.18.300e-25466.17Nuclear control of ATP synthase 2 [Nannochloropsis... [more]
GAY04423.15.200e-4632.67Hypothetical protein PINS_012232 [Pythium insidios... [more]
XP_024575236.11.300e-4432.50Nuclear control of ATP synthase 2 [Plasmopara hals... [more]
XP_009522594.12.900e-4432.50hypothetical protein PHYSODRAFT_491076 [Phytophtho... [more]
POM78455.13.200e-4332.08NCA2 domain containing hypothetical protein [Phyto... [more]
ETI52340.15.400e-4333.00hypothetical protein F443_04481 [Phytophthora para... [more]
XP_002902264.11.000e-4140.30conserved hypothetical protein [Phytophthora infes... [more]
CBJ26254.11.700e-4144.44conserved unknown protein [Ectocarpus siliculosus][more]
ETI52341.18.600e-4139.36hypothetical protein, variant [Phytophthora parasi... [more]
CCI48294.18.600e-4139.93unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005443NSK005443Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04520.1NO03G04520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573009gene_1655Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100035g49gene753Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04520.1NO03G04520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04520 ID=NO03G04520|Name=NO03G04520|organism=Nannochloropsis oceanica|type=gene|length=3084bp
CACAGCACATCACCAACGGGCTCCTTCAACCACAAAAACGCCGTGAGCAA
AGCACAAAACCATTGCCCCGTCCATCCATACAGCGGTACACAGCAAATTT
TCTCAAGAGCCCTGACTTGTTACTTACGATTGCTCCATCAGCTTCCCCGA
TCAGGATTCTTGCCTCATCATCACTTATTTCTCCCTGTGAGTGCCCCCGC
CGCGCCTCCTCGTGCTCTGCACTCTAGGCAATGAGCCACAAGGCACGCCC
CGAGGCCCTCTCCCGTCTCGGCAGCGTCACCGACCTAGTAAGCCTCCGTA
ACTTCCAGGGTCATAGCCTGATTGACCACCGACACAAGGAGCGCTTCCGC
CACAAGCGCATTCTCGATGCTTTGAATGTCCAAACCCGTCAAGGCATACC
TATTCAACGCTCTCTCGCCAAGCTCCAAGCCGAGGCGGAGAAAATCCTTC
ATGGCCGCATCCGTCTGTCGGACGATGAAACCCAGATTTTTGTCGCTTCC
TTAGCAGAATGCCAATTGCGGATATGCCTTGAAAGTGAGTTGGACTTATC
CGGCTCACTCTACTGGGATTGCCTGTTTTGGCAAGATCGCATCGCAAGTC
CATTGGCCGCTTGGTTGGAAGCCGGCCCTTTCACCTGGTTTCAAGACGAG
GACGAGGCACTTACCCCGGAGGATAAGCTGGAGAGTTCACAGCGGCTGAT
GGGGCAGATCAATGTGGGCACAGGATTAATTCAACAGCATCTGACTCGGA
AGATTGTCAATACTGATGTCATGTACCTGGCTGTATGGAGCCAAGAAGCC
CTGACATTGATCGATGATATACTTGACAATGATTTCGAGACCCCAGGACA
GCTGAACTTGGAGCGCTCGGGTCGCTTGCTTTTACCTGAAGATGCTATCT
CCAACTCCACCTCTGCCTCCGATTTGAGGGAATGCATGGCGCGTCTTGCG
ACCCTCCGCGCACGTATTGCATCGCGTGCCGCACGTTTCCAGACATTGAT
CGCACCGTTACATGCCCCATCATTTTGGCGTCGACGTTGGTTGTACATTC
TCATTGCCACGCCGTTTCTTGTAGTTAGCTTCAAGTGGTTTTGGGGGAAG
AGGGGGGATATACCCTTGTGGGTGGCACAGGCTGTTCAGAGTACGAGAGA
GTTCTTCACTGAACACGTGTCAGAACCCTCACGGGCGATATTTAAGGAAC
TGATTTGGAACGAACACGAGAGCATCACGGACGTGGCGGCGTTGGAGGAT
GCGAAGCAGAGCTTGACGCGGATGCTGGCCGATTTCGTGAAGGACACAAA
TCCAAAATTGTCCGAAAAGgtatgcttaccctccatctcttttaaaactt
ctgtccctttttgcctctttcgcagctcatcactgccttgtctttccctt
cttccctccctcccgaccttccatctgcagGAACGCAAAAAATTGGCAGA
GAGCATGGACATGAGTGTCGTCTCGTCGCGGTACGAGCAGACTTTACCCC
AAGCAATGAAGCACATCGTGAGTGGAGAAATTGTGCGGATGCTACTTATA
CAAGTCCAGTTTATCAAAAAGGAGCTGTTGGTGGCCATGAGAGGGATTGA
TGACGTCATGAATAGgtaagcaatttcggggcctgtcgagcagagaaaac
attcgctcaccaccaaacactgctcacccccatttcatccattcctccat
ccctgtattttgtctacctgcagCAACAACCTGAATTTCCGTCTCATGGC
AATTTTTCCCGCCGTGCTTGCTCTGTACGGGACGTACCAAGCTTCCAAAG
CTGCCATTTACAAGTTGACAAAGAAAAAAGGAAGGAGGGAGACAATTATG
TTGCTGCGGTCATTTTTGCTCTCTATGGAGAGGATGCTGAACCTGAGAAA
TGTCGGCGCCTCGGAGgtaggtagggagtgttggaattaattcggcacta
gggataaaacaggggctgattatctaaaaaaagaaccacacactttcgca
tttaacttcccgcttaccacccatgtccttctcccttcttcccttcctcc
cttcctcccctagAACGAGATCAAATACTTGAAGCTTGACCGCACCCCAG
TTCTCAAGCCCATCCATGCCCCTGTCGGTGCAGCTGGTCAATCTCTCTCT
CTCTCGCCAGCTCCGCACCTGAACCGGCACCAGCACCGGCACCACCTGTC
CACCTCCGTTTCTTTGCCAGCAGGAGCTACACATCCACCATCGGCAGCAA
CAGGAGCAGCAGTAGGAGTAGGAGTGGGAAGGAAAGACGGGTTATCTCTA
GATGAAATTAGGCAAATGTCTGCTGATAGCAGCGTCAATGGCAGAGGCGA
GAGCTCCTCGGTCTACGAGGACCTCCATAAGGAGAGGGCAGACGGCATTC
AAGGACAGAGGAACGGAGGGAGGGGGATAGAGGAGGAGAAAGACGATGGG
AGGGAACCGCCCAGGATTCAAACTGCTTGCCTGCAGGGCTCGCCGATCAG
CAGTGCGGAGAGCACGTGGGGGGACTTGGAAGGAGGAGGAAGTAATAATA
ATTACAACACAGATTTACGCGTTGTGTTCTTGAGGCCTGAAGACCTGGGG
GTGTTGCTACTGTTGGTAAATCAATTTGCCGGGGTCATTCAACGGACGAG
TAGTCGGTTTCTGACTGATCTGGAGCTGAGAAATCTGCAGGAGGACTTGA
ATGAGATCGCGGGAAACTGCGGGCCGGTGACTGTGGCACAGCAATTGTGT
GTGGTGCAACGAATGCACCGGAGCTATCGGTTTTTGCAGTTGCCAGCCGG
AAGTTTGTTTTCGGGGTTGTAATGTGGGGAAAGACTGGAAAGAAGAAGGA
AAGGCTGGGATTGATATGAAAAAATGCCATGAAATGGAGAAATATGGCCG
TTGCGGGTGTTACAGCACCGTCTAAATAGCAAGAGGGCTCTCGAAGTATC
ACTGGAAACATCAGAAATGTCTGGGTGTGCTCTATGCATATTAAAGAGAT
GGTGCGATAATTAATTAATGGAGTAGATATATATAGAGTAGATATATATA
GTGGTATTTATCGTCATGGTGAACTTTCGGGGGG
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protein sequence of NO03G04520.1

>NO03G04520.1-protein ID=NO03G04520.1-protein|Name=NO03G04520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=742bp
MSHKARPEALSRLGSVTDLVSLRNFQGHSLIDHRHKERFRHKRILDALNV
QTRQGIPIQRSLAKLQAEAEKILHGRIRLSDDETQIFVASLAECQLRICL
ESELDLSGSLYWDCLFWQDRIASPLAAWLEAGPFTWFQDEDEALTPEDKL
ESSQRLMGQINVGTGLIQQHLTRKIVNTDVMYLAVWSQEALTLIDDILDN
DFETPGQLNLERSGRLLLPEDAISNSTSASDLRECMARLATLRARIASRA
ARFQTLIAPLHAPSFWRRRWLYILIATPFLVVSFKWFWGKRGDIPLWVAQ
AVQSTREFFTEHVSEPSRAIFKELIWNEHESITDVAALEDAKQSLTRMLA
DFVKDTNPKLSEKERKKLAESMDMSVVSSRYEQTLPQAMKHIVSGEIVRM
LLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLALYGTYQASK
AAIYKLTKKKGRRETIMLLRSFLLSMERMLNLRNVGASENEIKYLKLDRT
PVLKPIHAPVGAAGQSLSLSPAPHLNRHQHRHHLSTSVSLPAGATHPPSA
ATGAAVGVGVGRKDGLSLDEIRQMSADSSVNGRGESSSVYEDLHKERADG
IQGQRNGGRGIEEEKDDGREPPRIQTACLQGSPISSAESTWGDLEGGGSN
NNYNTDLRVVFLRPEDLGVLLLLVNQFAGVIQRTSSRFLTDLELRNLQED
LNEIAGNCGPVTVAQQLCVVQRMHRSYRFLQLPAGSLFSGL*
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Synonyms
Publications