NO03G03300, NO03G03300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03300 vs. NCBI_GenBank
Match: EWM29766.1 (Aminotransferase, class IV [Nannochloropsis gaditana]) HSP 1 Score: 376.7 bits (966), Expect = 8.000e-101 Identity = 183/316 (57.91%), Postives = 236/316 (74.68%), Query Frame = 0 Query: 47 RLPRSHHMAVYTVARADTATAVTAASTEEDARTYLERNPRGAYTTARTVQLSKIFELDAHVERLASTAALMWPDQDLPADLVEAARLRPLVTSTLRAAMNHYRHT---TVADPTLATTELKFTILLIWHSDTCLVECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHDESGALLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLALPIDWIGVPKEGKPFAAGDLSRAFNYDDRCLTRRLVRWVEEEVAQVSME 360 RLP + + + RA + + A + ED++T+LER+ RGAYTTARTV+ SKIF LDAHV+RL+ TA LMWPDQ L AD+VE +RLR +V LR A+ H+R + +++ ELK TIL +WH++ ++ECL H LP RP PPI VE+RGAPR+NAKAKDS WV++RK LE LK D NEI+L D GALLEGTQTNFY +++GKL+TAGEGVLEGTVR+L+L+ CA H +PVIL PPPN++DL+ WEGALLSSTSRL LPIDWIG+P+E K F GD+ RAF Y++ CLT RLV WV++ + Q S++ Sbjct: 66 RLPMAAYTEARVLIRASCTSTIFAVCSHEDSKTFLERHSRGAYTTARTVRGSKIFVLDAHVKRLSETAMLMWPDQALLADIVEPSRLRAVVMKALRVAIEHHRSSHKPLGGQASISQEELKLTILFVWHTEDSMLECLYHVSQLPLRPSPPIKVEVRGAPRSNAKAKDSGWVRERKRLEYLKPVDTNEILLRDVDGALLEGTQTNFYVVMEGKLWTAGEGVLEGTVRKLVLEACAAHHIPVILHPPPNLKDLQRWEGALLSSTSRLLLPIDWIGIPQETKSFQEGDVCRAFKYENDCLTSRLVEWVDDNILQSSVD 381
BLAST of NO03G03300 vs. NCBI_GenBank
Match: PRW59887.1 (class IV [Chlorella sorokiniana]) HSP 1 Score: 191.4 bits (485), Expect = 4.800e-45 Identity = 118/289 (40.83%), Postives = 151/289 (52.25%), Query Frame = 0 Query: 80 YLERNPRGAYTTARTVQLSKIFELDAHVERLASTAALM--------------------WPDQDLPADLVEAARLRPLVTSTLRAAMNHYRHTTVADPTLATTELKFTILLIWHSDT--------------------------CLVECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHDESGALLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLALPIDWIGVPKEG 323 +LE +PRGAYTTARTV S +FEL H++RLAS+A LM A+LRP V + LRAA+ YR T D A ELK T+L+ W T + H LP RP P+ + +RGAPR NA AKDS WV+KRK LE VNE+VL G L EG +NF+A+ G +YTAGEG+L GTVR + LQ+ +PV+L+ PP ++DL +WEG +SSTSRL LP+D V +EG Sbjct: 92 FLEASPRGAYTTARTVGGSAVFELGFHIDRLASSARLMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAQLRPRVLAALRAAVRGYRAAT-GD---ADGELKLTVLVTWPGGTEHEVAADGLHTADDSEAPPPGCTPAAAAADVFVHVSPLPLRPASPVKIVMRGAPRENAAAKDSEWVRKRKALEVGLPAGVNEVVLVGSCGGLYEGLSSNFFAVANGTVYTAGEGILAGTVREVALQVARHEGIPVVLE-PPRLQDLDSWEGCFISSTSRLLLPVDEASVLQEG 375
BLAST of NO03G03300 vs. NCBI_GenBank
Match: XP_005845359.1 (hypothetical protein CHLNCDRAFT_137177 [Chlorella variabilis] >EFN53257.1 hypothetical protein CHLNCDRAFT_137177 [Chlorella variabilis]) HSP 1 Score: 185.3 bits (469), Expect = 3.400e-43 Identity = 112/291 (38.49%), Postives = 157/291 (53.95%), Query Frame = 0 Query: 74 EEDARTYLERNPRGAYTTARTVQLSKIFELDAHVERLASTAALM-------WPDQDLPADLVEAARLRPLVTSTLRAAMNHYRHTTVADPTLATTELKFTILLIWHS-----------------------------------DTCLVECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHDESGALLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLALPIDWIGVPKEG 323 E+ + +LE PRGAYTTARTV S + EL H++RLA++A LM ARLRP V + ++AA+ YR A A E++ T+L+ W + + + L H ALPPRP PP+ V +RGAPR NA+AKDS WV++R+ L V E++L E GALLEG +NF+A+ +G ++TAGEG+L GTVR ++L + +PV+L+ PP + DL W+G ++STSRL LP+D GV EG Sbjct: 14 EQASGPWLEAAPRGAYTTARTVGGSSVLELSFHIQRLATSAGLMMXXXXXXXXXXXXXXXXXXVARLRPRVLAAMQAAVRGYR----AASGDADGEVRLTVLVTWQACQAQDGQQEAAPPVAGAGXXXXXXXXXXXXXXXXXEEGAFDVLVHVSALPPRPAPPVRVVMRGAPRHNAEAKDSEWVRQRRGLLHGLPPGVEEVLLVGEGGALLEGLSSNFFAVARGAVHTAGEGILAGTVREVVLAVARREGIPVVLE-PPRLADLEAWDGCFITSTSRLLLPVDEAGVFPEG 299
BLAST of NO03G03300 vs. NCBI_GenBank
Match: XP_013902492.1 (hypothetical protein MNEG_4482 [Monoraphidium neglectum] >KIZ03473.1 hypothetical protein MNEG_4482 [Monoraphidium neglectum]) HSP 1 Score: 175.3 bits (443), Expect = 3.500e-40 Identity = 116/324 (35.80%), Postives = 168/324 (51.85%), Query Frame = 0 Query: 75 EDARTYLERNPRGAYTTARTV--QLSKIFELDAHVERLASTAALM------WPDQDLPA-DLVEAARLRPLVTSTLRAAMNHYRHTTVADPTLATTE------------------------------LKFTILLIWHSDTC-LVECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHDESGALLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLALPID-WIGVPKEGKPFAAGDLSRAFNYDDRCLTRRLVRWVEEEVAQVS 358 + A +L+ PRGAYTTARTV +++ +L +H+ RLA +A+LM + PA A +LRP V + A + +R A ++ + L+ W ++ + CH ALPPRP PP+ ++ RG PR+NA+AKDS WV++R+ LE K DVNE+VL G LLEG +NF+A+ +G + TA EGVL GT+R ++L+ C+ VPV L+ PP + D+ W+GA +SSTSRL LP D + P+ D RAF + L RRL V E + + S Sbjct: 53 QGAGAWLQAAPRGAYTTARTVGDDGARVLKLASHISRLALSASLMAAADSQLVTSEAPAPPSFTAEQLRPRVLQCMGAVIAAFRSGVCAGGLQSSADSGAPGFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTWGDESAESFDLWCHGEALPPRPRPPVKLQFRGLPRSNARAKDSEWVRQRRALEQAKPTDVNEVVLGTPDGDLLEGLSSNFFALHRGVVVTADEGVLSGTIREIVLEACSEVGVPVRLE-PPRMSDIEEWQGAFISSTSRLLLPADELLWAPQGDAGLEGPDRVRAFG-EQHPLVRRLEAAVAERILRDS 374
BLAST of NO03G03300 vs. NCBI_GenBank
Match: GAY03244.1 (thioredoxin-like protein [Pythium insidiosum]) HSP 1 Score: 174.5 bits (441), Expect = 6.000e-40 Identity = 114/275 (41.45%), Postives = 161/275 (58.55%), Query Frame = 0 Query: 47 RLPRSHHMAVYTVARADTATAVTAASTEEDARTYLERNPRGAYTTARTVQLSKIFELDAHVERLA-STAALMWPDQDLP--ADLVEAARLRPLVTSTLRAAMNHYRHTTVADPTLATTELKFTILLIW--HSDT----CLVECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHD-ESGALLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLAL 312 RLP++ VA A A+ E DA +L P GAYT ARTVQ +K+F+ + H++RL ST A+ Q P A VE+ LRP STLRAAM+ ++ A+P E K T+L+ +DT + CH LPP P+ + + G PR NA AKDSAWV++RKH+ + DV EI+L + ++ LLEG+QTNFY + G +YTA EG+L+GTVR L+L++C +PV L+ PP ++ + +W+ +SSTSRL L Sbjct: 6 RLPKA-----LLVAAAKNGRAIPC---EVDATKFLLSYPSGAYTAARTVQQTKVFDYEGHIKRLVDSTIAMEASKQTAPLSAQHVESV-LRPRTESTLRAAMSSFKERFGAEP---QEEYKLTVLVCXDEKADTPASLDTTDIYCHIGLLPPLRDGPVKLVVAGMPRHNASAKDSAWVRERKHIYDAXAXDVEEIILMEPDTHRLLEGSQTNFYVLRSGVIYTAEEGILKGTVRSLVLEVCEELGIPVXLE-PPTLDTIESWDACFISSTSRLVL 267
BLAST of NO03G03300 vs. NCBI_GenBank
Match: XP_009538536.1 (hypothetical protein PHYSODRAFT_353129 [Phytophthora sojae] >EGZ05675.1 hypothetical protein PHYSODRAFT_353129 [Phytophthora sojae]) HSP 1 Score: 173.7 bits (439), Expect = 1.000e-39 Identity = 104/253 (41.11%), Postives = 146/253 (57.71%), Query Frame = 0 Query: 70 AASTEEDARTYLERNPRGAYTTARTVQLSKIFELDAHVERLASTAALMWPDQDLPADLVEAARLRPLVTSTLRAAMNHYRHTTVADPTLATTELKFTILLI-WHSDT---------CLVECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHD-ESGALLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLAL 312 A + DA +L +PRGAYT ARTVQ +KIF+ +AH+ RL + M D+ L VE LRP +TL+AAM ++ E K +L+ DT + CH LPP + +E+ G PR NA AKDSAWV++RK + + D+ E++L D + LLEG+QTNFYAI G +YTA +G+L+GTVR L+L++CA + +PV L PP ++D+ W+G +SSTSRL L Sbjct: 450 AIPCDSDATAFLLAHPRGAYTAARTVQQTKIFDYEAHIRRLVDSTVAMQTDKQLVPSAVE-KELRPRTEATLQAAMTAFK---AQFEVHKDQEYKINVLVCPSEGDTAGQGDGQVLADTDVFCHVGFLPPLRSEMVKLEVAGLPRHNAAAKDSAWVRERKAIYDRMAPDMEEVILMDPATRQLLEGSQTNFYAIQDGAVYTAEDGILKGTVRSLVLEVCAENGIPVKLS-PPTLDDVEKWQGCFISSTSRLVL 697
BLAST of NO03G03300 vs. NCBI_GenBank
Match: ETI38329.1 (hypothetical protein F443_15926 [Phytophthora parasitica P1569] >ETM38343.1 hypothetical protein L914_15341 [Phytophthora parasitica]) HSP 1 Score: 167.2 bits (422), Expect = 9.600e-38 Identity = 99/244 (40.57%), Postives = 143/244 (58.61%), Query Frame = 0 Query: 76 DARTYLERNPRGAYTTARTVQLSKIFELDAHVERLASTAALMWPDQDLPADLVEAARLRPLVTSTLRAAMNHYRHTTVADPTLATTELKFTILL------IWHSDTCL-VECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHDESGA-LLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLAL 312 DA +L +PRGAYT ARTV +KIF+ DAH+ RL + +M ++ L ++ VE LRP +T+ AAM ++ E K +L+ I + + CH LPP + +E+ G PR NA AKDSAWV++RK + + D+ E++L D + LLEG+QTNFY I G +YTA EG+L+GTVR L+L++C + +PV L PP ++D+ W+G +SSTSRL L Sbjct: 26 DATAFLLAHPRGAYTAARTVLQTKIFDYDAHIRRLVESTVVMQSEKQLISNAVE-KELRPRTEATIIAAMTAFKGLYEVQ---KDQEYKINVLVCPTEGNIGEGEVLADTDVYCHVGFLPPLRSEMVKLEVAGLPRHNAVAKDSAWVRERKAIYDRMAPDMEEVILMDPATRHLLEGSQTNFYTIQDGAVYTAEEGILKGTVRSLVLEVCEENGIPVKLS-PPTLDDVDKWQGCFISSTSRLVL 264
BLAST of NO03G03300 vs. NCBI_GenBank
Match: ETK78523.1 (hypothetical protein L915_15480 [Phytophthora parasitica] >ETL31949.1 hypothetical protein L916_15375 [Phytophthora parasitica] >ETL85179.1 hypothetical protein L917_15200 [Phytophthora parasitica] >ETO67098.1 hypothetical protein F444_15909 [Phytophthora parasitica P1976] >ETP08210.1 hypothetical protein F441_15763 [Phytophthora parasitica CJ01A1] >ETP36262.1 hypothetical protein F442_15770 [Phytophthora parasitica P10297] >KUF90599.1 Thioredoxin protein [Phytophthora nicotianae]) HSP 1 Score: 166.8 bits (421), Expect = 1.300e-37 Identity = 99/244 (40.57%), Postives = 142/244 (58.20%), Query Frame = 0 Query: 76 DARTYLERNPRGAYTTARTVQLSKIFELDAHVERLASTAALMWPDQDLPADLVEAARLRPLVTSTLRAAMNHYRHTTVADPTLATTELKFTILL------IWHSDTCL-VECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHDESGA-LLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLAL 312 DA +L +PRGAYT ARTV +KIF+ DAH+ RL + +M ++ L + VE LRP +T+ AAM ++ E K +L+ I + + CH LPP + +E+ G PR NA AKDSAWV++RK + + D+ E++L D + LLEG+QTNFY I G +YTA EG+L+GTVR L+L++C + +PV L PP ++D+ W+G +SSTSRL L Sbjct: 26 DATAFLLAHPRGAYTAARTVLQTKIFDYDAHIRRLVESTVVMQSEKQLISSAVE-KELRPRTEATIIAAMTAFKGLYEVQ---KDQEYKINVLVCPTEGNIGEGEVLADTDVYCHVGFLPPLRSEMVKLEVAGLPRHNAVAKDSAWVRERKAIYDRMAPDMEEVILMDPATRHLLEGSQTNFYTIQDGAVYTAEEGILKGTVRSLVLEVCEENGIPVKLS-PPTLDDVDKWQGCFISSTSRLVL 264
BLAST of NO03G03300 vs. NCBI_GenBank
Match: OWZ17934.1 (Thioredoxin [Phytophthora megakarya]) HSP 1 Score: 166.4 bits (420), Expect = 1.600e-37 Identity = 106/272 (38.97%), Postives = 153/272 (56.25%), Query Frame = 0 Query: 55 AVYTVARADTATAVTAAST------EEDARTYLERNPRGAYTTARTVQLSKIFELDAHVERLASTAALMWPDQDLPADLVEAARLRPLVTSTLRAAMNHYR--HTTVADPTLATTELKFTILLIWHSDTCLVECL------CHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHD-ESGALLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLAL 312 ++ V +A+ V AA + DA ++L +PRGAYT ARTV+ +KIF+ +AHV RL + M ++ L VE LRP T+ AAM ++ H D E K +L+ D + L CH LPP + +E+ G PR NA AKDSAWV++RK + + D+ E++L D + LLEG+QTNFY I +G ++TA EG+L+GTVR L+L++C +PV L PP ++D+ W+G +SSTSRL L Sbjct: 423 SLMAVRQAEKKLIVAAAKNGLAIPCDVDATSFLLSHPRGAYTAARTVEQTKIFDYEAHVRRLVESTIAMQTEKQLSPSAVE-KELRPRTEETMIAAMAAFKTLHEVQKD-----QEYKINVLVCPSEDKVDGQVLGDTDIFCHVGLLPPLRSEMVKLEVAGLPRHNAAAKDSAWVRERKAIYDRMAPDMEEVILMDPATRQLLEGSQTNFYVIQEGAVHTAEEGILKGTVRSLVLEVCEEIGIPVRLS-PPTLDDIEKWQGCFISSTSRLVL 687
BLAST of NO03G03300 vs. NCBI_GenBank
Match: PSC76550.1 (class IV [Micractinium conductrix]) HSP 1 Score: 166.4 bits (420), Expect = 1.600e-37 Identity = 110/299 (36.79%), Postives = 142/299 (47.49%), Query Frame = 0 Query: 80 YLERNPRGAYTTARTV-QLSKIFELDAHVERLAST---------------AALMWPDQDLPADLVEAARLRPLVTSTLRAAMNHYRHTTVADPTLATTELKFTILLIWHSD-----------------------------------TCLVECLCHACALPPRPCPPINVEIRGAPRTNAKAKDSAWVKKRKHLEALKSNDVNEIVLHDESGALLEGTQTNFYAIIKGKLYTAGEGVLEGTVRRLLLQICAVHDVPVILDPPPNIEDLRNWEGALLSSTSRLALPIDWIGVPKEGKPFAA 328 +L PRGAYTTARTV + FEL H+ RLAS+ RLRP V + LRAA+ YR T + ELK T+L+ W H LPPRP PP+ V +RG PR NA AKDS WV++RK +E DVNE VL GAL EG +N +A++ G ++TAGEG+L G+VR ++LQ+ +PV+L+ PP + DL WEG ++SSTSRL LP+D V E AA Sbjct: 22 WLAAAPRGAYTTARTVGGGAAAFELGFHINRLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRPRVLAALRAAVRAYRAATAH----SDGELKLTVLVTWPGSDRGQQAGGQAQPSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVAPLPPRPAPPVRVVMRGQPRQNAAAKDSEWVRQRKAIEQELPPDVNEAVLVGADGALFEGLTSNVFAVMDGAVHTAGEGILAGSVREVVLQVARREGIPVVLE-PPRLSDLPRWEGCMISSTSRLLLPVDEASVHPEAAAAAA 315 The following BLAST results are available for this feature:
BLAST of NO03G03300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03300 ID=NO03G03300|Name=NO03G03300|organism=Nannochloropsis oceanica|type=gene|length=1849bpback to top protein sequence of NO03G03300.1 >NO03G03300.1-protein ID=NO03G03300.1-protein|Name=NO03G03300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=361bpback to top Synonyms
Publications
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