NO03G02970, NO03G02970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_002979580.1 (exosome complex component RRP43 [Selaginella moellendorffii] >EFJ19469.1 hypothetical protein SELMODRAFT_233365 [Selaginella moellendorffii]) HSP 1 Score: 136.3 bits (342), Expect = 1.400e-28 Identity = 93/281 (33.10%), Postives = 148/281 (52.67%), Query Frame = 0 Query: 8 VETDALSYAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVI-----------LSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMAS-EQLARAFALCSARQKQVTR 277 VE DA + + A +L + A VR DGR LT RP S+ + + GSALVKIG T ++AG L +PA DTP +G + V+ +PP+C P+ + EE + +QN LL GVV +L I G+ W + +D+ CL +GSL DA +LA+ +ALA +Q+PA + + ++ + T PR L + FP LT+ ++ + D + EE + T+M ++L++ + + KAGG++ AS + AL R+K + + Sbjct: 5 VEVDA--FKRLYPAQFLERYLDASVRPDGRPLTRSRPTSVSFNAV-SSADGSALVKIGNTTMLAGAKLETMEPAADTPDQGCLSVDFVMPPICSPRVRPGR-PAEEAYVITEQLQNALLSSGVVDLRELSIVSGKAAWMIYLDVYCLDADGSLLDAALLASVAALAHLQVPAICVRSEGKITKAPPDAQASSDGIEFTQPRRLNLGEFPFALTVAMNQKSLIADPTAEEEAILDTKMIVILNSSQ-KIIALHKAGGSTTASTATIQDCLALAMRRRKTLQK 280
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_002977693.1 (exosome complex component RRP43 [Selaginella moellendorffii] >EFJ21031.1 hypothetical protein SELMODRAFT_176463 [Selaginella moellendorffii]) HSP 1 Score: 136.3 bits (342), Expect = 1.400e-28 Identity = 93/281 (33.10%), Postives = 148/281 (52.67%), Query Frame = 0 Query: 8 VETDALSYAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVI-----------LSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMAS-EQLARAFALCSARQKQVTR 277 VE DA + + A +L + A VR DGR LT RP S+ + + GSALVKIG T ++AG L +PA DTP +G + V+ +PP+C P+ + EE + +QN LL GVV +L I G+ W + +D+ CL +GSL DA +LA+ +ALA +Q+PA + + ++ + T PR L + FP LT+ ++ + D + EE + T+M ++L++ + + KAGG++ AS + AL R+K + + Sbjct: 5 VEVDA--FKRLYPAQFLERYLDASVRPDGRPLTRSRPTSVSFNAV-SSADGSALVKIGNTTMLAGAKLETMEPAADTPDQGCLSVDFVMPPICSPRVRPGR-PAEEAYVITEQLQNALLSSGVVDLRELSIVSGKAAWMIYLDVYCLDADGSLLDAALLASVAALAHLQVPAICVRSEGKITKAPPDAQASSDGIEFTQPRRLNLGEFPFALTVAMNQKSLIADPTAEEEAILDTKMIVILNSSQ-KIIALHKAGGSTTASTATIQDCLALAMRRRKTLQK 280
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_018966594.1 (PREDICTED: exosome complex component RRP43-like [Cyprinus carpio]) HSP 1 Score: 136.3 bits (342), Expect = 1.400e-28 Identity = 81/265 (30.57%), Postives = 132/265 (49.81%), Query Frame = 0 Query: 12 ALSYAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVILSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMASEQLARAFALCSARQKQVTR 277 A + + Y + +K R DGR L RP +L + T GSALVKIG T V+ G+ + P D P++G I V LPP+C K+ E+ +A F+ +V+ ++ E+L I + + W L DI CL ++G+L DACI+ +AL + QLP ++K+ ++ +PL++ R PV + + D + EEE + T + V+ E LC+ K GG S++ E+L R K++++ Sbjct: 2 AAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNISSV-STADGSALVKIGNTTVICGIKAELTTPPSDAPNRGYIVPNVDLPPLCSSKFRP-GPPGEQAQAASQFIADVIESSDLINMEELCIEKSKLCWVLYCDIMCLDYDGNLLDACIIVLLAALKNAQLPEVTINKETDLAEADIQKKQPLKINRLPVGSSFAVFDDSIIIVDPTAEEESLSTALLTVVTDEEDRLCAVHKPGGTSLSGEKLQHCINRAITRNKEISK 264
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_001626253.1 (predicted protein [Nematostella vectensis] >EDO34153.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 136.3 bits (342), Expect = 1.400e-28 Identity = 82/263 (31.18%), Postives = 132/263 (50.19%), Query Frame = 0 Query: 12 ALSYAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVILSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMASEQLARAFALCSARQKQV 275 A + + Y +K +R DGR L R L G + T GSALVK+G T VV GVT +PA D P+KG I V LPP+C P + E + L TF+ N++ ++ EDL I +G+ VW L +D+ CL ++G++ DA ++A +AL + +L ++++ E S+ L++ PV +T G+ D + EEER+ + V+ N + + K GG + ++L F + + R +V Sbjct: 2 AADFKTAEPVEYYKQFLKENIRPDGRGLFDFRETILNVGSI-STANGSALVKLGNTTVVCGVTAEFAEPAADVPNKGFIVPNVDLPPLCSPSFRP-GPPSEHAQVLSTFIDNLITNSQLIDLEDLCIVDGKLVWVLYIDLMCLDYDGNVADAAVIAMLAALQNTRLHTVTINEETETPEPSENKDIHLKLKSMPVAVTFGIFDDDHIYCDPTDEEERLASGKVSVVMTTNNKVVAVHKPGGPPLTQDKLQECFDVTTGRVLEV 262
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_009537303.1 (hypothetical protein PHYSODRAFT_529521 [Phytophthora sojae] >EGZ07737.1 hypothetical protein PHYSODRAFT_529521 [Phytophthora sojae]) HSP 1 Score: 136.0 bits (341), Expect = 1.900e-28 Identity = 80/243 (32.92%), Postives = 136/243 (55.97%), Query Frame = 0 Query: 15 YAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVV-ILSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMA 257 Y + A Y+ + + VR D R++ R + L ++Q T A S+LVK+G T V+ + L VG PA TP +GEI V+VHL P+C ++ S+ EE +++ + + +++ VV E L I +G+ WKL VD+ C+ H+G++ DA + + +AL ++LPAT++++ + VV I+ D PL + + + D L D ++EE + + + + + NG LC KAGG +A Sbjct: 18 YKKLFPAEYVRKCLASKVRPDSRTIEAARAVQLQTDVVQ-TAASSSLVKLGKTSVLTAIKLAVGTPAVATPDQGEIAVQVHLSPLCSNRF-SVGRPSEESQSISSQLTRIIVGSRVVEMESLSIVKGQSAWKLMVDVYCVDHDGNVLDAALTSIMAALKTLKLPATSVNEADNVVSIVPDEDATPLRVEHCAYATSFAVVEDSVLID-PTSDEEDLASAVFSLSYSTNGQLCGVHKAGGTIVA 257
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_005808491.1 (exosome complex component RRP43 [Xiphophorus maculatus]) HSP 1 Score: 136.0 bits (341), Expect = 1.900e-28 Identity = 82/252 (32.54%), Postives = 130/252 (51.59%), Query Frame = 0 Query: 23 YLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVILSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMASEQLARAFALCSARQKQV 275 Y + +K R DGR L+ R +L G + T GSALVKIG T ++ G+ + P D P KG I V LPP+C ++ E+ +A F+ +V+ V++ EDL + G+ W L DI CL ++G++ DACI+A +AL + QLP ++K+ ++ + L + + P + + D L EEE + T V+ E G LCS K GG+S++ E+L +ARQ+++ Sbjct: 13 YHRSFLKENCRPDGRELSEFRTTTLNIGSI-STADGSALVKIGNTTIICGIKAELANPTADAPGKGYIVPNVDLPPLCSSRFRP-GPPGEQAQAASQFIADVIESSEVIKAEDLCVDRGKLCWVLYCDIMCLDYDGNILDACIIALLAALKNTQLPEVTVNKETCSPEVNLEKRQRLRIHKHPASASFCVFDDSILIVDPTAEEESLSTAHLTVVTDEEGRLCSVHKPGGSSLSREKLQDCITRATARQREI 262
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_017572603.1 (PREDICTED: exosome complex component RRP43 [Pygocentrus nattereri]) HSP 1 Score: 136.0 bits (341), Expect = 1.900e-28 Identity = 80/265 (30.19%), Postives = 137/265 (51.70%), Query Frame = 0 Query: 12 ALSYAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVILSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMASEQLARAFALCSARQKQVTR 277 A + + Y + +K R DGR L RP +L G + T GSALV+IG T V+ G+ + P+ D P KG I V LPP+C ++ E+ +A F+ +V+ ++++EDL I + + W L DI CL ++G+L DAC++ +AL + QLP ++K+ ++ + R L++ + PV + + D + EEE + T + + E+ LC+ K GG+S+++E+L AR +++ R Sbjct: 2 AAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNTGSI-NTADGSALVRIGNTTVICGIKGELAAPSTDAPDKGYIVPNVDLPPLCSSRFRP-GPPGEQAQAASQFIADVIDGSQIIKKEDLCIEKSKLCWVLYCDIMCLDYDGNLLDACVVTLLAALRNTQLPTVTINKETDLAEVDIQHKRHLQINKHPVASSFAVFDDTVIIVDPTAEEESLATAIITAVTDEDEQLCAFHKPGGSSLSAEKLQDCITRAVARHREIGR 264
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_019379900.1 (PREDICTED: exosome complex component RRP43 [Gavialis gangeticus]) HSP 1 Score: 135.6 bits (340), Expect = 2.500e-28 Identity = 83/263 (31.56%), Postives = 130/263 (49.43%), Query Frame = 0 Query: 12 ALSYAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVILSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMASEQLARAFALCSARQKQV 275 A + + Y +K R DGR L R ++ G + T GSALVK+G T V+ G+ P D SKG I +V LPP+C ++ EE +A+ F+ +V+ ++ +EDL I G+ W L DI CL ++G++ DAC A +AL +VQLPA A++++ + ++ PL + ++PV + + D L EEE + T ++ E G LCS K GG+ + +L R K+V Sbjct: 2 AAGFKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSIT-TADGSALVKLGNTTVICGIKAEFAAPPVDATSKGYIVPDVDLPPLCSARFRP-GPPGEEAQAVSQFIADVIENSQIIMKEDLCIVNGKLAWVLYCDIICLDYDGNILDACTFALLAALKNVQLPAVAINEETGLAEVNLKQKTPLNIRKYPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLCSVHKPGGSPLTGAKLQDCITRAITRHKEV 262
BLAST of NO03G02970 vs. NCBI_GenBank
Match: ORX99013.1 (hypothetical protein K493DRAFT_406416 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 135.6 bits (340), Expect = 2.500e-28 Identity = 86/269 (31.97%), Postives = 139/269 (51.67%), Query Frame = 0 Query: 14 SYAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVILSDTPPRPLEMTRFPVPLTIGL-HSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMASEQLARAFALCSARQKQVTRARGQQ 282 ++ + A Y + +R DGRSL+G R + G + T GSALV+IG T V+ G+ V +P TP++G + V LPP+C ++ E+ + L + N+L C ++ + L I EG+ VW L VDI CL+++G++ DA ++A +AL +V+LP A DE +V + L++ P T GL ++ + D + TEE + T +T+ LD E+ L + K GG + EQ+ R ++V QQ Sbjct: 16 TFRKIHPAEYYRKFLSQNIRPDGRSLSGYRQTKVTPGAI-STADGSALVRIGDTSVLCGIKAEVAEPKIATPNEGFVVPNVELPPLCSSQFKP-GPPSEKAQVLSENINNLLHSCKIMSLDQLCIEEGKAVWVLYVDIVCLNYDGNIFDAALIAFIAALKNVKLPKVAYSSDEGMVTATREEETQLKLDHILYPATFGLFDGERVIADPNHTEESLVDTLVTITLD-ESNKLSAIWKDGGVPCSKEQMQEFIEAAKVRAQKVQEILDQQ 281
BLAST of NO03G02970 vs. NCBI_GenBank
Match: XP_022065747.1 (exosome complex component RRP43 [Acanthochromis polyacanthus]) HSP 1 Score: 135.6 bits (340), Expect = 2.500e-28 Identity = 83/265 (31.32%), Postives = 134/265 (50.57%), Query Frame = 0 Query: 12 ALSYAQFDSATYLANLVKAGVRQDGRSLTGLRPLSLLQGILQGTTAGSALVKIGGTKVVAGVTLLVGQPAEDTPSKGEIGVEVHLPPMCHPKYTSIQIQQEEGKALETFVQNVLLKCGVVRREDLRISEGRHVWKLNVDIQCLSHEGSLGDACILAAASALADVQLPATALDKDEEVVILSDTPPRPLEMTRFPVPLTIGLHSDKFLCDLSLTEEERMPTQMTLVLDAENGHLCSAQKAGGASMASEQLARAFALCSARQKQVTR 277 A + + Y + +K R DGR L+ R +L G + T GSALVK+G T ++ G+ + P + P KG I V LPP+C ++ E+ +A F+ +V+ V++ EDL I G+ W L DI CL ++G++ DACI+A +AL + QLP ++K+ ++ L + + PV + + D L EEE + T V+ E G LCS K GG S++ E+L + +ARQ+++ + Sbjct: 2 AAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSI-STADGSALVKLGNTTIICGIKAELTNPTVEAPGKGYIVPNVDLPPLCSSRFRP-GPPGEQAQAASQFIADVIESSEVIKTEDLCIDRGKLCWVLYCDIMCLDYDGNILDACIIALLAALKNTQLPEITINKETCTPEVNPAKRCGLHIHKHPVGASFCVFDDSILIVDPTAEEESLSTSHLTVVTDEAGRLCSLHKPGGTSLSGEKLQECISRATARQREIQK 264 The following BLAST results are available for this feature:
BLAST of NO03G02970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02970 ID=NO03G02970|Name=NO03G02970|organism=Nannochloropsis oceanica|type=gene|length=1266bpback to top protein sequence of NO03G02970.1 >NO03G02970.1-protein ID=NO03G02970.1-protein|Name=NO03G02970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=287bpback to top Synonyms
Publications
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