NO03G01840, NO03G01840 (gene) Nannochloropsis oceanica

Overview
NameNO03G01840
Unique NameNO03G01840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3912
Alignment locationchr3:568210..572121 -

Link to JBrowse

Properties
Property NameValue
DescriptionT-complex 11
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:568210..572121 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008862Tcp11
Homology
BLAST of NO03G01840 vs. NCBI_GenBank
Match: EWM29640.1 (T-complex 11 [Nannochloropsis gaditana])

HSP 1 Score: 690.3 bits (1780), Expect = 9.700e-195
Identity = 427/960 (44.48%), Postives = 548/960 (57.08%), Query Frame = 0
Query:   86 TPISPRGLNLG-RGIDMATAEDLVRSQHRHHQVRSSSSRPFSSTHWIRQSTALPAPSLELLLGDRHHPCESTPQHSPLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAALTLQRWIRRILQHWRLVRQVQVVVGAHLLPLLEASDALGAGPWAWEWESLCDEGRGLVGHASDVLNGLEMNDMDASATEDRATHPETLLSALLIAAHPEVVTSSCSSKSKRRRLVYERKGWALAQGATRVHETLLALHHYLEQPGISRWIVSWGIRQVKHALRVFTWQREQCQGVAASETGSLAEELTKAVVDVLETVSRSKREMHLXXXXXXXXXXXPTKIVAICERAIREGVAKLGQLDEALQRLVGRPEAERRIEVAKQIVEQRLGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPTESLYSNEWLVHEMCVLPHGRFLQVSLEANASTAAAKATAALSMPPTTSTCQTESQAGAEAYWASVTRTLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRRNLGGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLEERVGRMLVEGKCPVLKLLYTRAVDVVHAELRREGRSMTAMRGEETREIKTQCLRQGLMGLEGWIVKVYDLLLLVSRHNEAAFLPLYRVLALEAM 1045
            +P S  GLNLG R I  +        +H  HQV SSS  P       +  TA    S +LL  D       T QHS                                   A L LQRW R + +HWRLV+QVQ      LLPLLEA++A  AG WA EWE++C +G  L  HA  +L GL     +  A +   THP TLLSALLI+ HPE + ++   +SKRRR  +ER+G AL Q A+RVHETLLAL+H L Q  + RW++   + QV+ A R++  QR + QGV+ +E   L   +T A V V + + RS+++  +                  C  AI EG A+L  L+ ALQ+LVG+ +  RR+++A+Q+ E+                                                                   + T++++SNEWLVHE+CVLP  RFLQVS+E              S P T       SQ   +AYW +VT+TLL GD++PLLVLVQELA+RLIS TPSRADL +E+ G+LDVALL QVLSKD+LDSQLLFS+LRF G RIL LEAPARN ST+ WL +L ELE++V  Q G   VRLSLQ    +  W P + PLFEFLLEKVDQIHVDIFN+H+RRATPHCRAHGP FER  FE+RLAQG TS+ R   WL GVV S W  EQ++ V   R+GD R++L EG+ Q   +A++ ++RR + SLLA+              G    V  E  +PETLA+DA RL +ARHAL CVA   T+VAYLGQA+ R L  EER  V Q LMVLLPE  V   DI LHVGH A ++LG+     RK++EERV R+L EG+CPV +LLY RAVDVVHA L RE     +   +E+  +   C +QGL G+E  I+K+ D++LLV+RHNEA FL LY+ L  +A+
Sbjct:   81 SPASSGGLNLGKRRIAQSETSTFQSPRHLKHQVSSSSYLP-------QPRTARKNKSAQLL--DFLRDGIKTQQHS-------------------------CQALGMAREHAILVLQRWFRNLREHWRLVKQVQEATSQSLLPLLEAAEASRAGSWASEWEAMCRQG-SLEFHACHMLQGLGF-AREGQAADKSLTHPMTLLSALLISVHPEAIMTASPVRSKRRRREHERRGIALVQAASRVHETLLALYHCLHQAKMPRWVMLRAVVQVRKAFRLYVVQRVRYQGVSDAEAARLVRRVTHAAVGVFKAMHRSQQKSQVDAAQAIE-----------CAEAIIEGEARLRHLEAALQQLVGQRDTARRMDMARQVAEE--------------------------GKQRDGKIHGRSELKPLASDQDETLMSMDSEPEGELHASGDTQTDTIFSNEWLVHEICVLPKSRFLQVSME------------DASQPLTCG--NKPSQGDTQAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQ----------GRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGRQLRAEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLERE----ESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDAL 939          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: CBN79311.1 (t-complex 11 (mouse) like 2, isoform CRA_a (Partial), partial [Ectocarpus siliculosus])

HSP 1 Score: 138.3 bits (347), Expect = 1.400e-28
Identity = 95/246 (38.62%), Postives = 125/246 (50.81%), Query Frame = 0
Query:  536 LYSNEWLVHEMCVLPHGRFLQVSLEANASTAAAKATAALSMPPTTSTCQTESQAGAEAYWASVTRTLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWL 782
            L S EWLV    V+  G  L VS+E      A +     S  P  +    E   G  AYW++V   +   DYTPLL LV EL +++I  TP R DL  E   A+DV LL Q++     D    F M+ FAGER+L LEAP RN+ TK  LA     +++V  +GGR  +               +VR  FE+L  K D+IHVDI N H++  TP  + HG  +ER  F ++L  G TSL     WL
Sbjct:  735 LLSKEWLVPG--VMISGETLTVSME-----EAIENQLLRSGNPAVAAGGGED--GVNAYWSTVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEV--EGGRRRLE------------PAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGETSLDMTHLWL 957          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: CBN76843.1 (novel protein containing a T-complex protein 11 domain (zgc:73347) [Ectocarpus siliculosus])

HSP 1 Score: 113.6 bits (283), Expect = 3.700e-21
Identity = 88/295 (29.83%), Postives = 131/295 (44.41%), Query Frame = 0
Query:  606 DYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNS--GWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRR 899
            D+ PLL L+ E+ E L+S TP+ + LV EV   L    L ++L    LD++ +  ++ F   RIL L+AP R++  + WL              G  A   +    G   A  PL+  +FEF+  ++++I  D  N H+R   P+   HG  +ER  FE RL++G  SL R + WL   V    G                      +G    RE+  K V++  F  LL    ++  +   D      G     GV+PETLA D  RL  AR  +  V   AT+   + Q + R
Sbjct:  488 DFGPLLALLGEVREELVSLTPNNSVLVGEVRAVLSQERLAEMLRDKTLDARQVQRLVGFIAGRILNLQAPVRSDGARAWLK-------------GFDASMEAAIASGDPLAIIPLLPRVFEFVFAQMEEIKRDTANAHIRLVAPYLARHGAPYERAKFEARLSRGDVSLERTKAWLSSAVQGFLGGDXXXXXXXXXXXXXXXXXXXXDG----REELHKAVLQEAFTGLL---RSTVRLDRPDAAAAAAG-----GVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLAR 757          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: XP_005856379.1 (t-complex 11 like isoform cra b [Nannochloropsis gaditana CCMP526] >EKU19982.1 t-complex 11 like isoform cra b [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 98.2 bits (243), Expect = 1.600e-16
Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = 0
Query:  606 DYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAE 836
            +Y P L LV E+ E+L S TP R DL EE+   LD  LL Q+  + +LD+  ++ +L++  + ++ L+AP R   T +W   ++  E++V       ++  S   +   +A+  L+  +F  +  ++D+   DI + H++   P+   HG  +ER+ F  R   G   L     WL  V+ S   A     +       HR  L+  +    +  L++ VR   CS L E
Sbjct:  559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSW---ISGFEKEV-----HASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAM----KCLLQQPVRIEICSNLPE 776          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: EWM25426.1 (T-complex 11 [Nannochloropsis gaditana])

HSP 1 Score: 98.2 bits (243), Expect = 1.600e-16
Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = 0
Query:  606 DYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAE 836
            +Y P L LV E+ E+L S TP R DL EE+   LD  LL Q+  + +LD+  ++ +L++  + ++ L+AP R   T +W   ++  E++V       ++  S   +   +A+  L+  +F  +  ++D+   DI + H++   P+   HG  +ER+ F  R   G   L     WL  V+ S   A     +       HR  L+  +    +  L++ VR   CS L E
Sbjct:  559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSW---ISGFEKEV-----HASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAM----KCLLQQPVRIEICSNLPE 776          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: GBG33876.1 (Hypothetical Protein FCC1311_100992 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 81.3 bits (199), Expect = 2.100e-11
Identity = 61/206 (29.61%), Postives = 95/206 (46.12%), Query Frame = 0
Query:  584 QTESQAGAEAYWASVTRTLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWL-AQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSG 789
            Q       +A W  +   +   D+  L  L+ EL + + S TP+R DL  ++  ALD+ LLGQ+L  +   S  L  +  F  + I  LEAPAR+E T  WL + L +L+   K        ++ L  E             F+F  EK++Q+ +D+ N  +R+ +P     G    R  F+KR+  G  SL   R ++     SG
Sbjct:  127 QVVMDTAKDAMWRLIEEDMARKDFRRLFALIDELKQVMASITPNRKDLHAQLDAALDLDLLGQMLEHNSAASWDLRPLTEFVVKYIRMLEAPARSEHTDAWLKSYLAKLDAADKDHHDELHHKVHLLHE------------FFDFCHEKLEQVRLDMTNAFLRQISPVVSEEGADMIRAEFQKRVDAGEVSLEYTRAFVAKAFPSG 320          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: GBG24792.1 (Hypothetical Protein FCC1311_010102 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 79.3 bits (194), Expect = 7.800e-11
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 0
Query:  613 LVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPH-CRAHGPLFERQSFEKRLAQG 771
            +V E+  RL + TP+RADL+ ++   LD  LL Q + ++  +   L+S+++F GER+L L+AP R E T++WL  L+                  +  +    +W  L    F+F+L ++  I  D+ N H++    +     G  + R+ F  RL QG
Sbjct:  581 IVAEVCSRLAALTPNRADLIRQLEERLDTELLAQQVRENAFNQADLYSLVQFIGERLLALQAPIRQERTESWLMDLH------------------VAAQERRKSWQDLAPRAFDFVLRELAAIETDMANFHLKVLRDNVSHDQGAAYLREHFIGRLRQG 721          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: XP_008617091.1 (hypothetical protein SDRG_12789 [Saprolegnia diclina VS20] >EQC29539.1 hypothetical protein SDRG_12789 [Saprolegnia diclina VS20])

HSP 1 Score: 73.2 bits (178), Expect = 5.600e-9
Identity = 107/465 (23.01%), Postives = 171/465 (36.77%), Query Frame = 0
Query:  585 TESQAGAEAYWASVTRTLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLD--SQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRRN---LGGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLEERVGRMLVEGKCPVLKLLYTRAVDVVHAELRREGRSMTAMRGEETREIKTQCLRQGLMGLEGWIVKVYDLLLLVSRHNEAAFLPLYRVLALEAM 1045
            T +Q   +A+W  +  T    D   ++    +L ++L +    +A     +  AL  A L  + S    D  + +L  MLR     IL  EAPAR  ST  WL +                   S +   +  AW   +    +F   KVD+I +D  N H++   P+   HG   E++ F  +L QGAT+LA   QWL        TA  TLR                      DAL    RR + SL+ +        G  V          +   PETL +D  R+   R+ +  +   A +V  +  A+  +      ++       + +L   +     D+ +H    A   LG   +       ER    +++    V KL + R    + + L             +T E++   L   L  L   +  +      ++RHNEA     Y  L  EA+
Sbjct:  455 TVAQTMRQAFWDQLAAT---RDRARIVGSFVDLRDQLTAVLKHKA-----LATALPTAHLEALASSSSWDEWATVLQQMLR----AILHGEAPARTSSTHAWLNR-------------------SQETPASEAAWVEALVRFLQFGFAKVDEIQIDSMNAHLKLLAPYVARHGVEHEQKKFALKLEQGATTLAATSQWL---TRQLATAAPTLR----------------------DALTAGDRRAYRSLVQDAFVGLVTSGMAV----------DTPWPETLELDKDRVRDLRNQMDVLTMQACLVTLIQGALAPHHVAYAPKDAAAFCDQIRILAHADETRLPDLAVHASAVAARVLGAKGQALDTAALERRAEHMLDPANAVYKLFFQRVTQALTSFL-------------QTNEME---LHPTLSVLAPHVTTMVQAAAKLARHNEAVHCHYYNRLIREAL 837          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: OQR84509.1 (hypothetical protein ACHHYP_13293 [Achlya hypogyna])

HSP 1 Score: 72.8 bits (177), Expect = 7.300e-9
Identity = 91/377 (24.14%), Postives = 136/377 (36.07%), Query Frame = 0
Query:  669 ILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYL-GQAIRRNLGGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLEERVGRMLVEGKCPVLKLLYTRAVDVVHAELRREGRSMTAMRGEETREIKTQCLRQGLMGLEGWIVKVYDLLLLVSRHNEAAFLPLYRVLALEAM 1045
            IL  EAPARN+ST   LA +                   +       A    +    EF   KVD+IH+D  N H++   P+   HG   E++ F  +L  G  +LA   QWL   V +  T                  L   L      A + V+   F +L++E  A  +M                   PET A+D  R+   R+ +  +A  A+++  L G    R     +       + +L         D+ +H    A   +  +DR A   +  RV   L +    V  L + R +  +   LR       A+    T E+    LR  L  L     K       ++RHNEA  +  Y  L  EAM
Sbjct:  523 ILAGEAPARNDSTTAHLATV-----------------AGIAPPSTEAAIVDALVNFLEFAFAKVDEIHIDSMNAHLKALGPYVARHGVEHEQKKFALKLESGIVTLAHTEQWLRSHVAAAPT-----------------PLRSELAAGNRAAFRTVLHTAFVALVSEHVAGDSMW------------------PETFALDKDRVRGLRNQVDLLAMQASLITILQGSVAPRRYSAADAAAFCSQIAILTEASDTRVGDLAVHTAAEAARLVPSVDRAA---VMRRVEHTL-DPSDAVFALFFKRVLQTLSTYLR-----SNALEIHPTLEV----LRAQLTALVQTAAK-------LARHNEAVHVHYYNRLIREAM 827          
BLAST of NO03G01840 vs. NCBI_GenBank
Match: OON09308.1 (hypothetical protein BSLG_01619 [Batrachochytrium salamandrivorans])

HSP 1 Score: 67.4 bits (163), Expect = 3.100e-7
Identity = 82/367 (22.34%), Postives = 148/367 (40.33%), Query Frame = 0
Query:  592 EAYWASVTRTLLGGDY-TPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRRNLGGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLEERVGRML 958
            +A++ +V + +  G+Y   +++L++E+ + L+    +   +  E++  LD  L+ Q ++  V D   L   + +AGE++L L AP R+ S ++                      L    + AN             +L+ + ++ +D+ N  ++   PH +     +ER  F+  L  G+ SL R R WL        TA   +R  + +    RI+  E  ++  +DAL E V                     + +  G + +    + ETL MDA R+   ++    V   A +V   G  + +   G +      GL  LL E  V   D    + H     + LI   A   LE+R   +L
Sbjct:  561 QAFFDNVGQEIAAGNYANHVVLLLKEIKQGLLDMVSTDGKIATEINSVLDFDLIHQQITHGVFD---LHKTMHYAGEKMLQLCAPMRDASIRH----------------------LDASTDMANA---------LSMMLDILSEMKLDLSNYRLQALKPHLQRQSVDYERSKFDNALRDGSVSLERTRAWLS-------TAVAGIRAINNQRNPERINHPENSVK-FQDALHEGV---------------------LNLVFGNVAVDPATMAETLVMDAARIYAFQNQAQAVTVIAALVMLTGNIVPQLRSGFD----DHGLAELLSELKVLLADKETCLDH----LVTLIVTKANASLEKRQSVLL 856          
The following BLAST results are available for this feature:
BLAST of NO03G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 10
Match NameE-valueIdentityDescription
EWM29640.19.700e-19544.48T-complex 11 [Nannochloropsis gaditana][more]
CBN79311.11.400e-2838.62t-complex 11 (mouse) like 2, isoform CRA_a (Partia... [more]
CBN76843.13.700e-2129.83novel protein containing a T-complex protein 11 do... [more]
XP_005856379.11.600e-1627.83t-complex 11 like isoform cra b [Nannochloropsis g... [more]
EWM25426.11.600e-1627.83T-complex 11 [Nannochloropsis gaditana][more]
GBG33876.12.100e-1129.61Hypothetical Protein FCC1311_100992 [Aurantiochytr... [more]
GBG24792.17.800e-1129.56Hypothetical Protein FCC1311_010102 [Aurantiochytr... [more]
XP_008617091.15.600e-923.01hypothetical protein SDRG_12789 [Saprolegnia dicli... [more]
OQR84509.17.300e-924.14hypothetical protein ACHHYP_13293 [Achlya hypogyna... [more]
OON09308.13.100e-722.34hypothetical protein BSLG_01619 [Batrachochytrium ... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005717NSK005717Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01840.1NO03G01840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667321gene_1369Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100050g17gene1003Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01840.1NO03G01840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01840 ID=NO03G01840|Name=NO03G01840|organism=Nannochloropsis oceanica|type=gene|length=3912bp
CAGGTTCATCTCAAAAGGGTTGTCTTTTGTGCAGTCAGCGCTCTTGCGGC
TCTCCAACACCGCCCCTCGTTTCCGGCCCACTTTTTCCTGGGAGCCACAA
GTGTTACCATGATCAGCGCCGGCACTGCATCAGAAAATACTAATAATACG
TCCAACAACTCTGTGGCTGTAGCTTCGGCTGTTGCAGCCTCTGCAAGTGG
GGCCGGATCGAGTGCGTCGTCATCGTCGTCAACATCGGCCTCATCCAATC
GCGCAGCAACTGCCGCCGTTGGCTCCGTGGCAAGCAACAAGGGAGCCACA
TCCTCAACAAAGATTACGTCTGGGACGGTTGCTGATATGATATATGACGA
TATGGGTCCTCACACGCCCATTTCTCCCCGAGGTCTCAATTTGGGAAGGG
GGATCGACATGGCCACGGCTGAAGACCTTGTTCGTTCCCAGCATCGCCAC
CACCAAGTCCGCTCGTCGTCGTCCCGGCCCTTCAGCTCTACGCATTGGAT
AAGACAATCCACTGCACTGCCGGCTCCCTCTTTGGAGCTTCTTCTGGGTG
ATCGTCACCATCCCTGTGAAAGTACCCCTCAGCATTCCCCCCTACAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATAAACA
AGAACAAGAACAAGAACAAGTAGCCCTTGCCTTGGCAAGGCGCGCAGCCT
TGACCTTGCAACGCTGGATCCGACGAATTTTACAACACTGGCGCCTGGTG
CGCCAAGTGCAAGTGGTTGTGGGCGCGCATCTCTTGCCTCTGCTGGAGGC
AAGCGACGCCTTGGGAGCAGGCCCCTGGGCGTGGGAATGGGAAAGCTTGT
GTGACGAAGGACGAGGGCTCGTAGGCCATGCATCGGATGTTCTGAACGGG
CTAGAGATGAATGACATGGATGCATCTGCCACCGAGGACCGGGCCACGCA
CCCCGAGACGTTGCTGTCAGCCTTGCTGATCGCAGCGCACCCAGAGGTCG
TCACCTCCTCCTGCTCCTCGAAAAGCAAGCGCCGCAGACTGGTGTACGAA
CGGAAAGGCTGGGCTCTGGCTCAAGGTGCGACACGGGTGCATGAAACTCT
CTTGGCGCTGCACCACTATTTGGAACAGCCCGGGATCTCTCGTTGGATCG
TCTCTTGGGGGATAAGGCAAGTGAAGCATGCGCTGCGTGTATTCACCTGG
CAGCGGGAGCAATGCCAGGGTGTGGCAGCCTCGGAGACGGGTAGCTTGGC
TGAGGAATTGACGAAAGCAGTGGTGGATGTGCTCGAGACCGTGTCTCGGA
GTAAACGAGAGATGCACCTGAAGCTGCAGCTGCATCAGCAACAGCAACAG
CAACCCACTAAAATTGTAGCGATCTGTGAGCGAGCGATTCGGGAGGGCGT
GGCAAAGCTGGGGCAGCTAGATGAGGCACTGCAACGGCTGGTGGGTAGAC
CAGAAGCCGAACGGCGCATTGAAGTTGCAAAGCAGATTGTCGAACAACGG
CTGGGCTTGGCGGCTGAAGATGAAAAGGAAGAGGAGAATAGAGAGGTCGA
CAGCAGCACGGAGGATTCGGACTGCATTATTCAGCAGCAGCAACAACAGC
ATGTCTTTTTGACCGAAGGGGGAAAATGTGCGGAGAAAAATGCCGAACAG
CAGCAACATGAGGAGGAGCTGCACCAACACCAGCAGCAGCAGGTGGTGAG
TCCCACAGAGTCTCTCTATTCGAATGAATGGCTGGTGCACGAAATGTGCG
TCCTACCCCATGGTCGTTTTCTTCAAGTATCCTTGGAAGCCAATGCATCT
ACTGCAGCTGCCAAGGCCACTGCCGCACTTTCCATGCCTCCCACTACTTC
CACTTGCCAAACCGAAAGCCAAGCCGGTGCCGAAGCGTACTGGGCAAGCG
TCACTCGCACCCTGCTCGGGGGCGACTATACACCTTTGCTGGTCCTGGTA
CAGGAGCTGGCGGAACGCTTGATTTCAACTACTCCCTCCCGGGCGGATTT
GGTGGAGGAAGTGCACGGAGCTTTGGATGTGGCGTTGCTTGGCCAGGTGT
TGAGTAAAGATGTTCTTGATTCACAGTTGCTTTTCTCGATGCTCCGGTTT
GCAGGAGAGCGGATTCTGTGGTTGGAGGCCCCGGCAAGGAATGAGTCGAC
GAAAAACTGGCTTGCTCAATTGAATGAGCTAGAGGAGCAGGTGAAATGGC
AGGGGGGAAGGGGGGCGGTAAGGCTGTCACTGCAAGGCGAGGGGGCGAAC
ACGGCATGGGCGCCACTGGTTCGTCCCCTATTTGAGTTTCTGTTGGAGAA
GGTGGATCAGATCCATGTGGATATCTTTAATACGCATGTACGACGCGCGA
CTCCTCATTGTAGGGCACATGGTCCGTTGTTCGAGAGACAGTCGTTTGAG
AAGAGGCTTGCTCAGGGGGCGACTTCCTTGGCTAGGGCGAGACAGTGGTT
GGGTGGTGTGGTGAACTCTGGATGGACCGCAGAGCAGACCTTGCGCGTGC
ATGATCGCAGGTATGGGGATCATCGCATTAGCTTGGCGGAGGGTCTGATG
CAAAATCGGGAGGATGCGTTGAAGGAGGTGGTGAGGAGGGGATTCTGTTC
CTTGCTGGCAGAAGGGGAGGCGAGCAGGGCGATGGGTGGGTTTGATGTAG
GAGTTGGGGGAGGAGGGCTGGTGTTGCACGAGGGGGTAATTCCGGAGACG
CTTGCGATGGACGCGCATAGACTGGATGTGGCACGGCATGCGTTGTTGTG
CGTGGCAAGGACAGCGACAATAGTGGCCTATCTTGGGCAGGCTATCAGAA
GGAATCTAGGAGGGGAAGAACGGGTGGAGGTTACTCAGGGGCTGATGGTG
CTGTTGCCAGAAGAGGCGGTAACGGAGGTTGACATTCGGTTGCATGTTGG
TCATTGGGCAGAGAGCAAGTTAGGCTTGATTGACCGGCCGGCCAGGAAGC
TGCTTGAGGAGAGGGTTGGACGGATGCTGGTCGAGGGTAAATGTCCTGTT
TTGAAGCTTCTATATACTCGGGCTGTGGATGTGGTGCATGCTGAGTTGAG
ACGAGAGGGACGGAGCATGACGGCGATGAGGGGGGAAGAGACACGTGAGA
TCAAAACGCAGTGTTTGCGACAGGGTTTGATGGGATTGGAGGGATGGATT
GTGAAGGTATATGATCTGCTGTTGTTGGTAAGTCGGCATAATGAGGCGGC
GTTTCTGCCCCTGTATCGGGTGTTGGCATTAGAAGCAATGGCCGAGCATC
AACAGGTGCAACAGCAAGTGCAGCACCTTGGATGTGACGCCATGATGGTG
GGTGAGTAAATCTGTAAAGAAGGAATGAAGCATAGCGATACCAGACCAGG
GGAAATAGGAGAAAGCTTGCATTCAACTATGATTTTTGTATGTGATGCTT
AGTGCAACATAAGTGTGATACCAGAGGCCGATAGGCAATGTGCAGCATTT
TAAGGGAGAAAATATGTTGCGAAAGAGAACAGACCTGAATTGTGGGTGAG
AAGGGAGAACCGACAGACAGGTGTCAAGGTAGATGATATGATATATATGT
GTGCATGAACAGCGTAGGATAGAGAGGGTCAAATATCGTGAATCTGTCTC
GACGACGACCTGATGAGAAATAAATCCGAATGTGATCCTGTAAAGGCATG
CAAACAAAAAGATTGAGATGATAAAATCAGTTGAAGAAGATGCAAGTGTA
AGGATAAGTGACTCTTACAAGAATGATAATTGAAAAAGAAGAGTATGAAT
GACAAGGCAGAGAGATAGAGATAGGTCACAGGCAAGGACAAGGGAAATTT
AAATTAAATCAACATTTGTGAAGAGTGAAAGGAAGGAGAGAAGAAGAAAA
TATGCAGGTATACGAGCAACGCATGCATAAGTACAGGTAAAACTAAGCAA
CATTTGCATATG
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protein sequence of NO03G01840.1

>NO03G01840.1-protein ID=NO03G01840.1-protein|Name=NO03G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1067bp
MISAGTASENTNNTSNNSVAVASAVAASASGAGSSASSSSSTSASSNRAA
TAAVGSVASNKGATSSTKITSGTVADMIYDDMGPHTPISPRGLNLGRGID
MATAEDLVRSQHRHHQVRSSSSRPFSSTHWIRQSTALPAPSLELLLGDRH
HPCESTPQHSPLQQQQQQQQQQQQQQQQNKQEQEQEQVALALARRAALTL
QRWIRRILQHWRLVRQVQVVVGAHLLPLLEASDALGAGPWAWEWESLCDE
GRGLVGHASDVLNGLEMNDMDASATEDRATHPETLLSALLIAAHPEVVTS
SCSSKSKRRRLVYERKGWALAQGATRVHETLLALHHYLEQPGISRWIVSW
GIRQVKHALRVFTWQREQCQGVAASETGSLAEELTKAVVDVLETVSRSKR
EMHLKLQLHQQQQQQPTKIVAICERAIREGVAKLGQLDEALQRLVGRPEA
ERRIEVAKQIVEQRLGLAAEDEKEEENREVDSSTEDSDCIIQQQQQQHVF
LTEGGKCAEKNAEQQQHEEELHQHQQQQVVSPTESLYSNEWLVHEMCVLP
HGRFLQVSLEANASTAAAKATAALSMPPTTSTCQTESQAGAEAYWASVTR
TLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSK
DVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGG
RGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPH
CRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDR
RYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVG
GGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRRNL
GGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLE
ERVGRMLVEGKCPVLKLLYTRAVDVVHAELRREGRSMTAMRGEETREIKT
QCLRQGLMGLEGWIVKVYDLLLLVSRHNEAAFLPLYRVLALEAMAEHQQV
QQQVQHLGCDAMMVGE*
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Synonyms
Publications