NO03G01380, NO03G01380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01380 vs. NCBI_GenBank
Match: ETM01510.1 (hypothetical protein L917_01918 [Phytophthora parasitica] >ETM54714.1 hypothetical protein L914_01997 [Phytophthora parasitica]) HSP 1 Score: 157.9 bits (398), Expect = 2.800e-35 Identity = 81/163 (49.69%), Postives = 103/163 (63.19%), Query Frame = 0 Query: 8 RVAGTAITKTTTAAAASALTRKPRLVYFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 RV G + T A A PR +FH + A HG + P + + + + + G SILD AH ++++LEGACE ACSTCHVILEDPVF++LE+ E+EEDMLD AFGLT TSRLGCQV +T+ +G + LP ATRNFY+DGHVPKPH Sbjct: 3 RVFGQRLLSRTGPANA------PR--FFHASAAALHGDMSKFANNPAVHIKFKLRDDSIKEVEAKTGMSILDVAHANDIDLEGACESSMACSTCHVILEDPVFDELEEACEDEEDMLDMAFGLTDTSRLGCQVFVTEDFEGTTVSLPKATRNFYVDGHVPKPH 157
BLAST of NO03G01380 vs. NCBI_GenBank
Match: CBN74086.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 156.8 bits (395), Expect = 6.200e-35 Identity = 73/134 (54.48%), Postives = 95/134 (70.90%), Query Frame = 0 Query: 38 TTAVAHGSGKD-LNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 T HG ++ A + + W K G + T G +++ AH+H ++LEGACEGVCACSTCHVI+ + VF++L + SE+EEDMLD AFGLT TSRLGCQV +T +DGI +KLP ATRNFY+DGHVP+PH Sbjct: 67 TARACHGDHEEGFEHAQTVQITWENKDGLK-KTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 199
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_002984046.2 (adrenodoxin-like protein 2, mitochondrial [Selaginella moellendorffii]) HSP 1 Score: 155.6 bits (392), Expect = 1.400e-34 Identity = 74/132 (56.06%), Postives = 96/132 (72.73%), Query Frame = 0 Query: 40 AVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVI-LEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 A + S D P+I++ ++ K G E S VG S+L+AAH +E+ELEGACEG ACSTCHVI +++ +++KL +PS+EE DMLD AFGLT TSRLGCQ+ LDG+R+ LP ATRNF +DGHVPKPH Sbjct: 55 AFSSPSAASEQDKPKISVTFVDKNGSEKSIQVPVGMSMLEAAHENEIELEGACEGSLACSTCHVIFMDEELYQKLPEPSDEENDMLDLAFGLTETSRLGCQIIAKPELDGMRLALPPATRNFAVDGHVPKPH 186
BLAST of NO03G01380 vs. NCBI_GenBank
Match: POM58587.1 (2Fe-2S ferredoxin [Phytophthora palmivora var. palmivora]) HSP 1 Score: 155.2 bits (391), Expect = 1.800e-34 Identity = 74/147 (50.34%), Postives = 95/147 (64.63%), Query Frame = 0 Query: 24 SALTRKPRLVYFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 +A R PR +FH + HG P + L + + + G S+L+ AH ++++LEGACE ACSTCHVILED VF++LE+ E+EEDMLD AFGLT TSRLGCQV + + DG + LP ATRNFY+DGHVPKPH Sbjct: 12 AARARTPR--FFHASATALHGDMSKFAGNPTVQLKFKLRDDSIKEVEAKTGMSLLEVAHANDIDLEGACESSMACSTCHVILEDSVFDELEEACEDEEDMLDMAFGLTDTSRLGCQVIVDEGFDGTTVTLPQATRNFYVDGHVPKPH 156
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_002960091.2 (adrenodoxin-like protein 2, mitochondrial [Selaginella moellendorffii]) HSP 1 Score: 155.2 bits (391), Expect = 1.800e-34 Identity = 72/121 (59.50%), Postives = 93/121 (76.86%), Query Frame = 0 Query: 51 DAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVI-LEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 D P+I++ ++ K G E S VG S+L+AAH +E+ELEGACEG ACSTCHVI +++ +++KL +PS+EE DMLD AFGLT TSRLGCQ+ LDG+R+ LP ATRNF +DGHVPKPH Sbjct: 66 DKPKISVTFVDKNGSEKSIQVPVGMSMLEAAHENEIELEGACEGSLACSTCHVIFMDEELYQKLPEPSDEENDMLDLAFGLTETSRLGCQIIAKPELDGMRLALPPATRNFAVDGHVPKPH 186
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_003063243.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH52379.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 154.8 bits (390), Expect = 2.300e-34 Identity = 72/129 (55.81%), Postives = 94/129 (72.87%), Query Frame = 0 Query: 43 HGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILED-PVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 HG GKD +A I + +I K G E +G+S+L+ AH++++ELEGACEG ACSTCHVI+ED V++ L +P ++E DMLD AFGLT TSRLGCQV + +DG+R+ LP ATRNF +DG VPKPH Sbjct: 2 HGHGKDDPNAETIDVTFIEKDGTETKVKAPIGQSMLEVAHKNDIELEGACEGSLACSTCHVIIEDEKVYDALPEPDDDENDMLDLAFGLTETSRLGCQVIAAKEIDGLRLSLPRATRNFAVDGFVPKPH 130
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_024577068.1 (ferredoxin 1-like protein [Plasmopara halstedii] >CEG40699.1 ferredoxin 1-like protein [Plasmopara halstedii]) HSP 1 Score: 154.8 bits (390), Expect = 2.300e-34 Identity = 72/138 (52.17%), Postives = 92/138 (66.67%), Query Frame = 0 Query: 34 YFHGTTAVAHG-SGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 +F+ + V HG N+ + + + + G SILD AH ++++LEGACE ACSTCHVILED VF+KLE+P E+EEDMLD AFGLT TSRLGCQV + + +G + LP ATRNFY+DGHVPKPH Sbjct: 21 FFYASVTVLHGQQSNHTNNTTNVNIKFKLRDDTLKEVKAKTGMSILDVAHANDIDLEGACESSMACSTCHVILEDSVFDKLEEPCEDEEDMLDMAFGLTDTSRLGCQVVVQETFEGTIVTLPKATRNFYVDGHVPKPH 158
BLAST of NO03G01380 vs. NCBI_GenBank
Match: OWZ15613.1 (2Fe-2S ferredoxin [Phytophthora megakarya]) HSP 1 Score: 154.8 bits (390), Expect = 2.300e-34 Identity = 73/147 (49.66%), Postives = 97/147 (65.99%), Query Frame = 0 Query: 24 SALTRKPRLVYFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 +A R PR +FH + + HG P + + + + + G SIL+ AH ++++LEGACE ACSTCHVILE+PVF++LE+ E+EEDMLD AFGLT TSRLGCQV + + +G + LP ATRNFY+DGHVPKPH Sbjct: 12 AACIRTPR--FFHASASALHGDMSKFAANPTVHIKFKLRDDSIKEVEAKTGMSILEVAHANDIDLEGACESSMACSTCHVILEEPVFDELEEACEDEEDMLDMAFGLTDTSRLGCQVIVDEGFEGTTVTLPQATRNFYVDGHVPKPH 156
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_021678937.1 (uncharacterized protein LOC110663825 [Hevea brasiliensis]) HSP 1 Score: 154.8 bits (390), Expect = 2.300e-34 Identity = 79/142 (55.63%), Postives = 97/142 (68.31%), Query Frame = 0 Query: 34 YFHGTTAVAHGSGKDLNDAPR----ITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILED-PVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 Y TTA SG D+ D I++ ++ K GEE +G S+L+AAH H++ELEGACEG ACSTCHVI+ D + KLEDP++EE DMLD AFGLT TSRLGCQV LDGIR+ +P ATRNF +DG+VPKPH Sbjct: 61 YLFSTTA----SGSDIGDGSEGKEMISVTFVDKDGEEKHIKVPIGMSMLEAAHEHDIELEGACEGSLACSTCHVIVMDVEYYNKLEDPTDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLAIPAATRNFAVDGYVPKPH 198
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_008606956.1 (ferredoxin, 2Fe-2S [Saprolegnia diclina VS20] >EQC39684.1 ferredoxin, 2Fe-2S [Saprolegnia diclina VS20]) HSP 1 Score: 154.5 bits (389), Expect = 3.100e-34 Identity = 74/136 (54.41%), Postives = 92/136 (67.65%), Query Frame = 0 Query: 35 FHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171 FH + A+ HG+ P + +++ K G VG SILD AH E++LEGACE ACSTCHVI E+PVF++L + E+EEDMLD AFGLT TSRLGCQV +T+ L + LP ATRNFY+DGHVPKPH Sbjct: 31 FHSSIALQHGAAP--VGGPTVPINFRLKDGSIKQVAAAVGTSILDVAHAFEIDLEGACESSLACSTCHVIFEEPVFDELPEACEDEEDMLDMAFGLTATSRLGCQVMVTEELANAIVTLPAATRNFYVDGHVPKPH 164 The following BLAST results are available for this feature:
BLAST of NO03G01380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01380 ID=NO03G01380|Name=NO03G01380|organism=Nannochloropsis oceanica|type=gene|length=513bpback to top protein sequence of NO03G01380.1 >NO03G01380.1-protein ID=NO03G01380.1-protein|Name=NO03G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=171bpback to top Synonyms
Publications
|