NO03G01220, NO03G01220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_011040711.1 (PREDICTED: protein sym-1 [Populus euphratica] >XP_011040712.1 PREDICTED: protein sym-1 [Populus euphratica] >XP_011040713.1 PREDICTED: protein sym-1 [Populus euphratica] >XP_011040714.1 PREDICTED: protein sym-1 [Populus euphratica]) HSP 1 Score: 112.8 bits (281), Expect = 2.100e-21 Identity = 63/188 (33.51%), Postives = 104/188 (55.32%), Query Frame = 0 Query: 161 YAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHREHL 349 Y LL PV+TKA+T+ ++ L GD++ QL ++AP LD R T G+V+ GP LH+ Y L + GA AF + VD+F+F P+F+ F +EG+ ++++P++Q+E++SA+ W L++P +F FR +P + +VL N+ +VW ++SF H+E L Sbjct: 129 YLNLLAKYPVLTKAVTSAILTLMGDLICQLVI-----------DQAP--SLDLKRTFVFTFLGLVLVGPTLHFWYLYLSK-LVTLPGASGAFLRLLVDQFVFSPIFIGVFLSTLVTLEGR--PSEVLPKLQQEWFSAVLANW---QLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKEVL 297
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_009347199.1 (PREDICTED: protein sym-1-like [Pyrus x bretschneideri] >XP_009347204.1 PREDICTED: protein sym-1-like [Pyrus x bretschneideri]) HSP 1 Score: 112.5 bits (280), Expect = 2.800e-21 Identity = 67/195 (34.36%), Postives = 105/195 (53.85%), Query Frame = 0 Query: 156 SLWGQYAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHREHLKE 351 SL Y +LL PV TKA+T+ L+ L GDM+ QL ++AP LD R T+ G+V+ GP LH+ Y L + GA AF + +D+F+F P F+ F +EGK + +VP++Q+E++SA+ W L++P +F FR +P + +VL N + W ++SF H+E L++ Sbjct: 150 SLLSWYLDLLAKYPVATKALTSALLTLIGDMVCQLVI-----------DKAP--YLDLKRTFLFTLMGLVLVGPTLHFWYLYLSK-LVTTPGASGAFLRLVLDQFLFAPTFIGVFLSTLMTLEGK--PSQVVPKLQQEWFSAVLVNW---QLWIPFQFLNFRFVPQQFQVLTANFIALTWNVILSFKAHKEVLQK 325
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_007202281.1 (protein sym-1 [Prunus persica] >ONH94555.1 hypothetical protein PRUPE_7G022300 [Prunus persica] >ONH94556.1 hypothetical protein PRUPE_7G022300 [Prunus persica] >ONH94557.1 hypothetical protein PRUPE_7G022300 [Prunus persica] >ONH94558.1 hypothetical protein PRUPE_7G022300 [Prunus persica]) HSP 1 Score: 112.1 bits (279), Expect = 3.600e-21 Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 0 Query: 156 SLWGQYAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHREHLKE 351 SL Y +LL PV TKA+T+ + L GD++ QL K LD R T+ G+V+ GP LH+ Y L + GA AF + +D+FIF P+F+ F +EGK + +VP++Q+E++SA+ W L++P +F FR +P + +VL N ++W ++SF H+E L++ Sbjct: 134 SLLSWYLDLLAKYPVSTKALTSAFLTLIGDVICQLVIDKTP-------------DLDLKRTFLFTLLGLVLVGPTLHFWYLYLSK-LVTTPGASGAFQRLLLDQFIFSPIFIGVFLSTLMTLEGK--PSQVVPKLQQEWFSAVLANW---QLWIPFQFLNFRFVPQQFQVLAANSISLIWNVILSFKAHKEVLQK 309
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_002278511.1 (PREDICTED: protein sym-1 [Vitis vinifera] >XP_010653664.1 PREDICTED: protein sym-1 [Vitis vinifera] >XP_019076939.1 PREDICTED: protein sym-1 [Vitis vinifera] >XP_019076940.1 PREDICTED: protein sym-1 [Vitis vinifera] >CBI32848.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 111.7 bits (278), Expect = 4.800e-21 Identity = 65/193 (33.68%), Postives = 104/193 (53.89%), Query Frame = 0 Query: 156 SLWGQYAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHREHL 349 SL Y LLE PV+TKAIT+ + L GD++ QL ++ P LD R T+ G+V+ GP LH+ Y L + GA AF + +D+F+F P+F+ F +EG+ + +VP++Q+E++SA+ W L++P +F FR +P + +VL N+ + W ++SF H+E L Sbjct: 118 SLLSWYLALLEKYPVLTKAITSAFLTLVGDLICQLVI-----------DQVP--SLDLKRTFLFTLLGLVLVGPTLHFWYLYLSK-LVTIPGASGAFLRLLLDQFLFSPIFIGVFLSTLVTLEGR--PSQVVPKLQQEWFSAVLANW---QLWIPFQFLNFRFVPQQFQVLAANVVALAWNVILSFKAHKEIL 291
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_005993375.1 (PREDICTED: peroxisomal membrane protein 2 [Latimeria chalumnae] >XP_005993376.1 PREDICTED: peroxisomal membrane protein 2 [Latimeria chalumnae] >XP_014342325.1 PREDICTED: peroxisomal membrane protein 2 [Latimeria chalumnae]) HSP 1 Score: 111.7 bits (278), Expect = 4.800e-21 Identity = 62/187 (33.16%), Postives = 102/187 (54.55%), Query Frame = 0 Query: 154 FKSLWGQYAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVS 341 ++ L QY LL+ P++TK+IT+G+++ G +L+Q E + A+G LDF+ L I G++ TGP HY Y +LE ++P Q + + +D IF P F++ FFF+ ++EGKNL +++ YW+ALK W V + P +F +P++ RVL N + W A ++ Sbjct: 14 YQQLLHQYLILLKKYPILTKSITSGILSAVGSLLSQALEQRGKTLNSAKG-------LDFIAPLRFAIYGLLFTGPISHYFYLSLEQFIP-QTAPFSVIKRLLLDRLIFAPAFLVLFFFIMNVLEGKNLAA-FRKKMKTSYWAALKMNWKV---WTPFQFININFVPVQFRVLFANFVALFWYAYLA 188
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_006430466.1 (protein sym-1 [Citrus clementina] >ESR43706.1 hypothetical protein CICLE_v10012325mg [Citrus clementina] >ESR43707.1 hypothetical protein CICLE_v10012325mg [Citrus clementina]) HSP 1 Score: 111.7 bits (278), Expect = 4.800e-21 Identity = 62/190 (32.63%), Postives = 104/190 (54.74%), Query Frame = 0 Query: 161 YAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHREHLKE 351 Y LL PV TKA+T+ L+ L GD++ QL E+ P LD R T+ G+V+ GP LH+ Y+ L M GA AF + D+F+F P+F+ F +EG+ ++++P++Q+E++S++ W L++P +F FR +P + +VL N+ + W ++SF H+E L++ Sbjct: 129 YLALLAKYPVATKAVTSALLTLIGDLICQL-----------TVEQVP--SLDLKRTFLFTLLGLVLVGPTLHFWYSHLNK-MVTMTGASGAFLRLLTDQFLFSPIFIGVFLSTLVTLEGR--PSEVLPKLQQEWFSSVVANW---QLWIPFQFLNFRFVPPQFQVLAANVIALAWNVILSFKAHKEILQK 299
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_009631456.1 (PREDICTED: protein sym-1 [Nicotiana tomentosiformis]) HSP 1 Score: 111.7 bits (278), Expect = 4.800e-21 Identity = 62/191 (32.46%), Postives = 105/191 (54.97%), Query Frame = 0 Query: 156 SLWGQYAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHRE 347 SL Y LLE PV TKA+T+ L+ LFGD++ QL+ ++A +D R T+ G+V+ GP LH+ Y L + GA A + +D+F+F P+FV F +EG++ + ++P++Q+E++S++ W L++P +F FR +P + +VL N +VW ++S+ H+E Sbjct: 129 SLLAWYLSLLEKYPVWTKAVTSALLTLFGDLICQLWIDQVA-------------SVDVKRTFIFTLLGLVLVGPSLHFWYLYLSR-LVTTPGASGAVMRLVLDQFLFAPIFVGVFLSSLVTLEGRS--SQVIPKLQQEWFSSVLANW---QLWIPFQFINFRFVPQQFQVLAANFIALVWNVILSYKAHKE 300
BLAST of NO03G01220 vs. NCBI_GenBank
Match: CBN77548.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 111.3 bits (277), Expect = 6.200e-21 Identity = 61/189 (32.28%), Postives = 103/189 (54.50%), Query Frame = 0 Query: 154 FKSLWGQYAELLESKPVVTKAITAGLIALFGDMLAQLFEYKL-ACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSF 342 F+ L G+YAE LE +P++ K T+ L+ GD+++Q + + R A + ++ + LAV I+G ++ P LH Y AL+ W+PA++ A V VD + DP+F L F GL+EG++ +I+ ++ +Y + + + L PL+ TF P++ RVL+ + DV+WT V F Sbjct: 78 FEKLLGRYAEELEKRPLIWKCATSALVGALGDVISQGVYWAIRGGRANAVWHDTNAVR----QSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESKAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFSQEIIRTIEDDYVTLVFWLVVIGLALAPLQVYTFNRFPVKWRVLISDGMDVLWTFVACF 262
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_018507650.1 (PREDICTED: protein sym-1-like [Pyrus x bretschneideri]) HSP 1 Score: 111.3 bits (277), Expect = 6.200e-21 Identity = 67/195 (34.36%), Postives = 105/195 (53.85%), Query Frame = 0 Query: 156 SLWGQYAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHREHLKE 351 SL Y +LL PV TKA+T+ L+ L GDM+ QL ++AP LD R T+ G+V+ GP LH+ Y L + GA AF + +D+F+F P F+ F +EGK + +VP++Q+E++SA+ W L++P +F FR +P + +VL N + W ++SF H+E L++ Sbjct: 150 SLLSWYLDLLAKYPVATKALTSALLTLIGDMVCQLVI-----------DKAP--YLDQKRTFLFTLMGLVLVGPTLHFWYLYLSK-LVTTPGASGAFLRLVLDQFLFAPTFIGVFLSTLMTLEGK--PSQVVPKLQQEWFSAVLVNW---QLWIPFQFLNFRFVPQQFQVLTANFIALTWNVILSFKAHKEVLQK 325
BLAST of NO03G01220 vs. NCBI_GenBank
Match: XP_020450067.1 (peroxisomal membrane protein 2 [Monopterus albus]) HSP 1 Score: 111.3 bits (277), Expect = 6.200e-21 Identity = 59/181 (32.60%), Postives = 97/181 (53.59%), Query Frame = 0 Query: 160 QYAELLESKPVVTKAITAGLIALFGDMLAQLFEYKLACRRLAEGEEAPPMKLDFLRCLAVTIEGVVITGPGLHYLYTALETWMPAQKGALAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKNLRTDIVPQVQREYWSALKGGWGVSLLFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVS 341 QY LL+ P++TK++T+G+++ G++L+Q+ E + R P ++D I G+ ITGP HY Y +E WMP + +D IF P F+L F+F+ ++E K R D V +++R YW+ALK W V + P +F +P++ RVL N+ + W A ++ Sbjct: 20 QYLILLKKYPILTKSVTSGILSALGNLLSQILEARKNAR-----NGGPVTEIDTAGAARYAIYGLFITGPLSHYFYQLMEVWMPT-TDHYCIVKRLLLDRLIFAPAFLLLFYFVMNILEAKG-REDFVKKMRRSYWTALKMNWKV---WTPFQFINVNFVPVQFRVLFANMIALFWYAYLA 190 The following BLAST results are available for this feature:
BLAST of NO03G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01220 ID=NO03G01220|Name=NO03G01220|organism=Nannochloropsis oceanica|type=gene|length=4563bpback to top protein sequence of NO03G01220.1 >NO03G01220.1-protein ID=NO03G01220.1-protein|Name=NO03G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bpback to top Synonyms
Publications
|