NO03G00090, NO03G00090 (gene) Nannochloropsis oceanica

Overview
NameNO03G00090
Unique NameNO03G00090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1671
Alignment locationchr3:26223..27893 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:26223..27893 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021134Bestrophin/UPF0187
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_067761724.1 (hypothetical protein [Niabella ginsenosidivorans] >ANH83768.1 hypothetical protein A8C56_07270 [Niabella ginsenosidivorans])

HSP 1 Score: 80.5 bits (197), Expect = 1.800e-11
Identity = 72/296 (24.32%), Postives = 130/296 (43.92%), Query Frame = 0
Query:  193 KKILPQLVVGILLNLVVEWFDLKH-----TGWWAIRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSS---ESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVE 478
            +K+LP L++  L++  + +F+L++       W     +   +H  +G  L+ +LVFR+N +YDR++EAR+  G +TN CR   ++  +     D+G   + +R  I     V+  F+R +    +  FM +S+   E +     G N +   I   +  L T  ++ G                     QL+  N E            +Q   D      RI  TP+PY Y+  +   +V+++ ++P  +    G  YF +  +   ++     + IA+  ENP   DA DL +E
Sbjct:   23 RKLLPYLLLMALISWGIAYFELEYLKLSEKSW---LKNINMVHNLLGFALSLLLVFRTNTAYDRWWEARRQWGALTNVCRSMAIKLDAYLSKTDKGS-RHFFRKSIPLYSQVLSGFLRSD----YTTFMLDSAAHPELDLEQKHGPNQVASMIFRYVNGLYTDGKITG--------------------DQLIVINNE------------IQSLTDICGACERIKNTPIPYSYSSFIKKFIVLYVVTLPVGFVFSMG--YFVIAAVPFVFYVLASLELIAESIENPFGTDADDLPLE 276          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_006514781.1 (putative membrane protein [Leptolyngbya sp. PCC 7375] >EKV00361.1 putative membrane protein [Leptolyngbya sp. PCC 7375])

HSP 1 Score: 79.0 bits (193), Expect = 5.300e-11
Identity = 87/339 (25.66%), Postives = 145/339 (42.77%), Query Frame = 0
Query:  168 LAKQNFSFLRIIFCGRNGMGSFWFIKKILPQLVVGILLNLVVEWFDLKHTGW---WAIRADTQRLHGFV-GAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAF-IRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNV-QPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVV-AYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDETRDISNFTHSLNK 500
            +A+    + + +FC R  +     I+ ++P++ + +   L+V   D  + G+   W I      L G V   VL  +LVFR+NASY+R++E RK  G I N  R    +   ++V  D    +     E   K LV  A   +Q++R+                         P    L  L+TP ++E  + +  PS   A    +   + QL  R   + +   +     L  SL   E   RI+ TP+P  Y+  L  +LV++  ++PF   S+  G    ++ LV  A FG + I  + ENP   D  DL +  +  +     +D+   T S+ K
Sbjct:    1 MAEDRRPWFKTLFCLRGSV-----IRAVMPRVGICVGFALIVTLLD--NAGFAVSWPI------LGGVVPSIVLGLLLVFRTNASYERFWEGRKLWGNIVNTTRNLARQ---IWVSVDTSRQS----KERALKLLVAFAIATKQHLRQ------------------------QPCAHELNHLVTPPQLEKLMGMNSPSLEIAFWLGDYLQVQQLKGRINSYQLQAMTSQLNSLVNSLGGCE---RILNTPLPLAYSIHLKQLLVMYCLALPFQVVSELNGWTIPVVALVAFAVFGVEEIGLEIENPFGCDRNDLPLNAICQTMEHNIQDLITLTPSIEK 292          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_013664626.1 (membrane protein [Sphingobacterium sp. 21] >ADZ77898.1 hypothetical protein Sph21_1335 [Sphingobacterium sp. 21])

HSP 1 Score: 78.6 bits (192), Expect = 7.000e-11
Identity = 72/302 (23.84%), Postives = 130/302 (43.05%), Query Frame = 0
Query:  192 IKKILPQLVV-----GILLNLVVEWFDLKHTGWWAIRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFH-----EGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVELLT 481
            IKK+ P L++       +  L +E+  L    W     +   +H  +G VL+ +LVFR+N +YDR++E RK  G +TN  R   L   S+     EG+  N  R+  ++   +  + +R++++ S   FM +  +     H      G N +   I  R   L     + G                     QL+  N E  +L ++ I    +          RI  TP+P+ Y   +   + +++ ++P+ +    G  YF +  +V A++     + IA++ E+P   D  DL +E +T
Sbjct:   22 IKKLYPYLILMAIYAWAIAYLEIEYLKLSEKSW---LRNIPSMHSLLGFVLSILLVFRTNTAYDRWWEGRKLWGQLTNNSRNLALRIESLL---PEGDKGN--RSFYKKSIPLFASTLREHLQSSQTRFMLDEKDHPEFNHLDENKHGPNQVAAMIFKRTDTLYREGVISG--------------------DQLIILNAE--LLSFTDICGACE----------RIKNTPIPFTYTSFIKKFISIYVLTLPYGFVFSLG--YFVVPAVVFAFYVLTSLELIAEEIEDPFGTDVNDLPLEKMT 281          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: PIO49156.1 (hypothetical protein CMR00_00245 [Chlorobium sp. 445])

HSP 1 Score: 78.6 bits (192), Expect = 7.000e-11
Identity = 71/308 (23.05%), Postives = 136/308 (44.16%), Query Frame = 0
Query:  192 IKKILPQLVVGILLNLVVEWFDLKHTGWWAIRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSAR-AACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVELLTMSNHDETRDISNFTH 496
            ++++LP + +  +   +V +FDL   G++ +      +H  +G VL  VLVFR+N +Y+R++E R+ LG + N  R   L+  +     D            R++F+ +I+     I                       ++R+ +  +  DL   S+ E    +QP+A     V   +    Q L  + + S+  +  +SQ L   +D    + RI  TP+P+ YA ++   +  +I+S+PF     R   +  ++I+   ++   G + IA+  ENP   D  DL  + +  +     ++I    H
Sbjct:   21 LRRLLPSMALMAVFTALVCYFDLV-KGYYKLEMPL-TVHTLLGVVLGLVLVFRTNTAYERWWEGRRLLGALVNAARNLALKLDAYLPQADYAR---------RQQFVALISAYALAI---------------------PKHLRETLTVQ--DLAMLSDAE-RACIQPAAHMPLAVMKLLLDKVQQLRTDNDISMEQFLALSQNLNELIDTLGGMERIKKTPIPFSYAMLIKRFIAAYIFSLPF--GLMRDFGWAAVVIVPFIFYVMVGIEVIAEDIENPFGTDRDDLPTDDIAQNLSRNVKEILTSVH 291          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_026462881.1 (membrane protein [Adhaeribacter aquaticus])

HSP 1 Score: 78.2 bits (191), Expect = 9.100e-11
Identity = 66/289 (22.84%), Postives = 131/289 (45.33%), Query Frame = 0
Query:  193 KKILPQLV-VGILLNLVVEWFDLK--HTGWWAIRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVV-AYFGCQRIAQQCENPLEWDACDLDVE 478
            +++LP ++ VG+   L+  + +L   H       ++   +H  +G V++ +LVFR+N +YDR++E RK  G +TN CR   ++  +            L  +  R+ F +MI         ++V  +      N  FHE      DP+     +   P+++   +  + SA               L +N + S+  +  ++  L    D      RI  TP+P+ Y+  +   + +++ ++PF +    G     +++L++ A+   + IA++ ENP   DA DL ++
Sbjct:   23 RRLLPLMIGVGVYAGLIA-YLELNYLHPSNTKFFSNIGMMHSVLGFVISLLLVFRTNTAYDRWWEGRKVWGGLTNTCRNLAIKLQAF-----------LQEDSDRQFFRLMI--------PNYVFALKQLLRENEDFHE-----LDPVLDIKSNKHLPNQIAASLFTRVSA---------------LQKNNKLSLEEFLALNADLSALTDLCGASERIKNTPIPFTYSVFIKKFIFLYVITLPFGWVFSMGYFIIPVVVLILYAFASLELIAEEIENPFGTDANDLPID 271          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_064196454.1 (hypothetical protein [Emticicia sp. MM])

HSP 1 Score: 78.2 bits (191), Expect = 9.100e-11
Identity = 61/263 (23.19%), Postives = 121/263 (46.01%), Query Frame = 0
Query:  229 LHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILV-VAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDETRDI 491
            +H  VG VL+ +LVFR+N+SYDR++E RK  G  TN  R   L+  +  ++ D  E   ++R  +    L +  ++R  +   H+ ++ N +E    F+    +I + I   +   ++    EG +N +                QL+  N E  + +   +  C            RI  TP+P  Y   +  M+ ++++++PF +  +       ++ L+  A+ G + IA++ E+P   D+ DL ++ +  +  +   +I
Sbjct:   58 IHSLVGFVLSLLLVFRTNSSYDRWWEGRKIWGSFTNNSRNLALKLSA--ILPDNHESKEVFRILVGNYLLAVKDYLRGQVNLEHLDYVGNYNED---FYANYKHIPNRIGQAIHLEISRLYKEGIINAE----------------QLIILNGEL-VSFTDNLGAC-----------ERIRNTPIPSSYNIFIKKMIFLYVFTMPFGFVLEFKFWAAPIVTLIFYAFAGIEMIAEEIEDPFGTDSNDLALDTIVKNVKNNLSEI 287          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_016198222.1 (hypothetical protein [Elizabethkingia meningoseptica] >EOR30900.1 hypothetical protein L100_04152 [Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535] >KUY16533.1 hypothetical protein ATB99_08835 [Elizabethkingia meningoseptica] >ODM53659.1 hypothetical protein BES09_05450 [Elizabethkingia meningoseptica] >OHT28883.1 hypothetical protein BFF93_05455 [Elizabethkingia meningoseptica] >OHT31871.1 hypothetical protein BGC12_06215 [Elizabethkingia meningoseptica] >OOH96689.1 hypothetical protein BMF97_05305 [Elizabethkingia meningoseptica] >AQX06400.1 hypothetical protein BBD33_14535 [Elizabethkingia meningoseptica] >AQX13931.1 hypothetical protein BBD35_16805 [Elizabethkingia meningoseptica] >OPB74092.1 hypothetical protein BAY31_07150 [Elizabethkingia meningoseptica] >OPB74176.1 hypothetical protein BAY30_12765 [Elizabethkingia meningoseptica] >OPC01005.1 hypothetical protein BAS10_01960 [Elizabethkingia meningoseptica] >OPC10559.1 hypothetical protein BAX93_08850 [Elizabethkingia meningoseptica] >OPC15421.1 hypothetical protein BAX94_04755 [Elizabethkingia meningoseptica] >AQX48447.1 hypothetical protein B5G46_14530 [Elizabethkingia meningoseptica])

HSP 1 Score: 77.8 bits (190), Expect = 1.200e-10
Identity = 70/297 (23.57%), Postives = 141/297 (47.47%), Query Frame = 0
Query:  193 KKILPQLVVGILLNLVVEWFDLKHTGW----WAIRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVELLTMS 483
            +K+LP +++  L++  + +++L+        W     T  +H  +G VL+ +LVFR+N++YDR++EARK  G +TN CR   ++  + ++ K++  + N +R  I      + +F+R +    +  FM +  +     H   N+       ++ +LL       + NV    +   ++      AQ +  N E + L  + I    +          RI  TP+PY Y+  +   +V+++ ++PF +    G  YF   ++   ++     + IA+  E+P   DA DL +E + ++
Sbjct:   23 RKLLPYIILMGLISWGIAYWELERLKLSDKSWVKNITT--VHSLLGFVLSLLLVFRTNSAYDRWWEARKQWGALTNTCRNLAIK-LNAYLPKEDITNRNFFRKAIPLYPQALFSFLRSD----YSTFMLDDIQ-----HPELNFDSKHGPNQVANLL-------FTNVNQLYKDRVISE-----AQFININQELTDL--TNICGACE----------RIKNTPIPYSYSSFIKKFIVLYVITLPFGFVFSMG--YFVTAVVPFIFYILASLELIAEAIEDPFGTDADDLPIEKMALN 281          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_078769410.1 (hypothetical protein [Elizabethkingia meningoseptica] >OPC24746.1 hypothetical protein BAX95_03425 [Elizabethkingia meningoseptica])

HSP 1 Score: 77.8 bits (190), Expect = 1.200e-10
Identity = 70/297 (23.57%), Postives = 141/297 (47.47%), Query Frame = 0
Query:  193 KKILPQLVVGILLNLVVEWFDLKHTGW----WAIRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVELLTMS 483
            +K+LP +++   ++  + +++L+        W     T  +H  +G VL+ +LVFR+N++YDR++EARK  G +TN CR   ++  + ++ K++  + N +R  I      + +F+R +    +  FM +  +     H   N+       ++ +LL       + NV    +   ++      AQL+  N E + L  + I    +          RI  TP+PY Y+  +   +V+++ ++PF +    G  YF   ++   ++     + IA+  E+P   DA DL +E + ++
Sbjct:   23 RKLLPYIILMGFISWGIAYWELERLKLSDKSWVKNITT--VHSLLGFVLSLLLVFRTNSAYDRWWEARKQWGALTNTCRNLAIK-LNAYLPKEDITNRNFFRKAIPLYPQALFSFLRSD----YSTFMLDDIQ-----HPELNFDSKHGPNQVANLL-------FTNVNQLYKDRVISE-----AQLININQELTDL--TNICGACE----------RIKNTPIPYSYSSFIKKFIVLYVITLPFGFVFSMG--YFVTAVVPFIFYILASLELIAEAIEDPFGTDADDLPIEKMALN 281          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_079468936.1 (hypothetical protein [Chitinophaga ginsengisegetis] >SKD00071.1 putative membrane protein [Chitinophaga ginsengisegetis])

HSP 1 Score: 77.8 bits (190), Expect = 1.200e-10
Identity = 67/296 (22.64%), Postives = 130/296 (43.92%), Query Frame = 0
Query:  192 IKKILPQLVVGILLNLVVEWFDLKHTGWWAIRADTQ-----RLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIA----FIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILV-VAYFGCQRIAQQCENPLEWDACDLDVE 478
            ++K+ P  +   + + ++ W +L+    W +   ++      ++G +G V++ +LVFR+N +YDR++E R+  G + N  R   ++  +M  ++++ +         R  F VMI      ++ ++R+++V     +     P H     I   +  +L  L+T   ++ Y N Q +              QL+  N E            LQ   D      RI  TP+P+ Y+  +   +  ++ S+PF Y    G     MI+ V       + IA++ E+P   DA DL ++
Sbjct:   22 VRKLFPMFIGLSIYSAIIAWLELE---VWKMSDKSELKNITLMYGLLGFVISLLLVFRTNTAYDRWWEGRRQWGALVNSSRNLAIKIQAMLPLENKAD---------REFFKVMIPNFAYGLKNHLRKTYVHDEMEAIPGQEPLHTD---ISKHVPNQLSQLITTKTMDLYRNGQLTG------------DQLIVLNNE------------LQSFADVCGACERIKNTPIPFSYSVFIKKFIFFYVMSMPFGYVFSLGYLIIPMIVFVFFVLASLELIAEEIEDPFGKDANDLPLD 278          
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_026994686.1 (membrane protein [Flectobacillus major])

HSP 1 Score: 77.4 bits (189), Expect = 1.500e-10
Identity = 77/307 (25.08%), Postives = 130/307 (42.35%), Query Frame = 0
Query:  193 KKILPQLVV-----GILLNLVVEWFDLKHTGWWAIRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHE-GTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVELLTMSNHDETRDI 491
            +K+ P L+      G++  L +E F L  +  +    +   +HG +G V++ +LVFR+N +YDR++E R+  G +TN  R   L+  +  ++  E  H  +    I  K +V  AF  +     H     N SE     H+ G  Y +     +L           Y  +Q   R   ++ E     QLL  N E             +   D      RI  TP+P+ Y   L   +  ++ ++PF Y    G  Y  + ++V  ++     + IA++ ENP   DA DL + +L  + H    +I
Sbjct:   23 RKLFPMLIAIGAYSGLIAYLEMEIFKLNESSHF---KNIPVMHGMLGFVISMLLVFRTNTAYDRWWEGRRNWGSLTNASRNFALKLNA--ILPQENSHQRV----IFEKLIVEYAFALKRHLRGH----QNDSELFISEHKIGAEYHKPNYIAKLI----------YQEIQKLYRDNIISGE-----QLLYINEE------------ARTFTDVCGACERIKNTPIPFSYTVFLKKFIFFYVMTLPFGYVFSLG--YIVIPVVVFIFYVLASLELIAEEIENPFGTDANDLPLSMLCKNIHKHVGEI 287          
The following BLAST results are available for this feature:
BLAST of NO03G00090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_067761724.11.800e-1124.32hypothetical protein [Niabella ginsenosidivorans] ... [more]
WP_006514781.15.300e-1125.66putative membrane protein [Leptolyngbya sp. PCC 73... [more]
WP_013664626.17.000e-1123.84membrane protein [Sphingobacterium sp. 21] >ADZ778... [more]
PIO49156.17.000e-1123.05hypothetical protein CMR00_00245 [Chlorobium sp. 4... [more]
WP_026462881.19.100e-1122.84membrane protein [Adhaeribacter aquaticus][more]
WP_064196454.19.100e-1123.19hypothetical protein [Emticicia sp. MM][more]
WP_016198222.11.200e-1023.57hypothetical protein [Elizabethkingia meningosepti... [more]
WP_078769410.11.200e-1023.57hypothetical protein [Elizabethkingia meningosepti... [more]
WP_079468936.11.200e-1022.64hypothetical protein [Chitinophaga ginsengisegetis... [more]
WP_026994686.11.500e-1025.08membrane protein [Flectobacillus major][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL071nonsL071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR084ncniR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR055ngnoR055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00090.1NO03G00090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00090.1NO03G00090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00090 ID=NO03G00090|Name=NO03G00090|organism=Nannochloropsis oceanica|type=gene|length=1671bp
ATGCCTTCGAAGGATTCCTCACCGTCTAAGCCATTTTTTGGCATGAAGCT
CTTCTCCCCCAACCTATGGCGCTCGTCCGCCTCGTCTCCGTCGCGTCGCT
CGTCCCAAGACCGACAACCGTCCCTTTTGCCCTTGCAAGCCCCGTCACAC
TCGCCTTCAACCCAGATCCAAGCTCCTCTGGCCTCTTCCATATCTTTTGG
TGACTTCTCGCGCGCAGATAGCACCACGCCAAATAATATGTGCTCCTCCT
CTTCCTTGTCATCCTCTCCTTTGGCTCAAACGTCCTCCTTGGCTCAAATT
ACCCCTCCACCGCCCCTTCTGAACGTGATCCGAGCAAAGGACCCCAAGGC
ATTCAAGGGCAAAGCAGCTTTGACCCGGTACCTGGATGCGATGGACCAAG
AGGAAGGCAGGGGCATGCAAACGGGGGGATTACTCGCGGATCCAACGCAG
GCCTCCTCGGCCAAGCACACCGAAATCCCCACCGTCCGCTACAGTAGCGA
GTTAGCCAAGCAGAATTTCTCCTTTCTCCGCATCATTTTTTGCGGGAGAA
ATGGGATGGGGTCCTTTTGGTTTATCAAGAAAATTCTTCCACAGTTGGTT
GTCGGCATCTTGCTCAACTTGGTTGTAGAGTGGTTTGACCTGAAGCATAC
GGGCTGGTGGGCCATTCGTGCTGACACGCAGCGACTGCACGGGTTCGTTG
GGGCAGTCTTGGCTTTTGTCTTGGTTTTTCGGAGCAATGCTAGTTATGAC
CGCTACTATGAGGCACGCAAAACGCTGGGTCTGATTACAAACCAATGCCG
CGAAGCGATTCTGGAGACGTGCTCCATGTTCGTGATTAAAGATGAAGGTG
AGCACAACAACCTGTATAGGAACGAGATTCGCAGAAAGTTCCTGGTCATG
ATAGCATTCATCCGGCAAAACATTCGCGAGTCCCACGTGGGGTTCATGCC
CAACTCTTCCGAAAGCAATACGCCTTTCCACGAAGGCACCAACTACATAA
GGGATCCGATCCGGCCCCGCCTGTGCGACCTGCTGACGCCTTCCGAGGTC
GAAGGTTATGTCAACGTCCAACCTTCGGCGCGCGCGGCGTGTGTGGCCAG
TGAGATCAAGGGCATTGCGCAGCTTTTGGCGCGGAACGTGGAGTTCAGTA
TTTTGTATTACAGCAAGATAAGCCAGTGTCTGCAGTTGTCTTTAGACGCA
CAAGAGACTCTGTACCGCATCGTGACCACGCCGGTTCCCTATCCCTACGC
CTGGATTCTGAATGTGATGCTGGTGGTGTTTATCTACTCCGTACCTTTCC
TGTACGACTCTCAGCGCGGTGGATCTTATTTTGGGATGATCATTTTGGTA
GTGGCGTACTTTGGGTGCCAGCGAATTGCGCAGCAGTGCGAGAATCCCTT
GGAGTGGGACGCCTGCGATCTCGACGTCGAGCTCTTGACCATGAGTAACC
ATGACGAGACGCGCGACATTTCCAACTTTACGCACAGCCTCAACAAGGGC
TTCATCCCCAGCAATATTCGTCGCACTGCCCCTGAGCCTCCCGCGCCTGT
CCCCGATTTGGCCGCTTCACAATCCCCGCCGGAGGCAACAACGCCGACCA
AGCCTCCCCCTGAGTCACCCGAGTCGGCTGCGGCAGCGCCGTCGTCGTCC
GTGCCTGCTGATGCAAAGTAG
back to top

protein sequence of NO03G00090.1

>NO03G00090.1-protein ID=NO03G00090.1-protein|Name=NO03G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=557bp
MPSKDSSPSKPFFGMKLFSPNLWRSSASSPSRRSSQDRQPSLLPLQAPSH
SPSTQIQAPLASSISFGDFSRADSTTPNNMCSSSSLSSSPLAQTSSLAQI
TPPPPLLNVIRAKDPKAFKGKAALTRYLDAMDQEEGRGMQTGGLLADPTQ
ASSAKHTEIPTVRYSSELAKQNFSFLRIIFCGRNGMGSFWFIKKILPQLV
VGILLNLVVEWFDLKHTGWWAIRADTQRLHGFVGAVLAFVLVFRSNASYD
RYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVM
IAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEV
EGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDA
QETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILV
VAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDETRDISNFTHSLNKG
FIPSNIRRTAPEPPAPVPDLAASQSPPEATTPTKPPPESPESAAAAPSSS
VPADAK*
back to top
Synonyms
Publications